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At least 163 records · Page 9

Online Interactive Platform for COVID-19 Literature Visual Analytics: Platform Development Study

Background Papers on COVID-19 are being published at a high rate and concern many different topics. Innovative tools are needed to aid researchers to find patterns in this vast amount of literature to identify subsets of interest in an automated fashion. Objective We present a new online software resource with a friendly user interface that allows users to query and interact with visual representations of relationships between publications. Methods We publicly released an application called PLATIPUS (Publication Literature Analysis and Text Interaction Platform for User Studies) that allows researchers to interact with literature supplied by COVIDScholar via a visual analytics platform. This tool contains standard filtering capabilities based on authors, journals, high-level categories, and various research-specific details via natural language processing and dozens of customizable visualizations that dynamically update from a researcher’s query. Results PLATIPUS is available online and currently links to over 100,000 publications and is still growing. This application has the potential to transform how COVID-19 researchers use public literature to enable their research. Conclusions The PLATIPUS application provides the end user with a variety of ways to search, filter, and visualize over 100,00 COVID-19 publications.</:p>

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

AutoGen: World's Fastest Building Energy Model Creator - Text Replacement for Variables for EnergyPlus files

AutoGen is the world's fastest EnergyPlus input file generator based on a base input file and sets of input variables. It has a simple user interface where a user can specify the directories and names of base input EnergyPlus file, list of input parameters to vary and metrics with the range of input values and a directory where the files will be generated. AutoGen uses OpenMP API to generate a large number of input files. It takes a base EnergyPlus input files (or a group of base Energyplus input files) along with a text or excel file with an input parameter to be varied and sensitivity metrics (i.e. the range of each input variables) of the input variables. It then uses Open PMP to perform the parallelization to generate the EnergyPlus files for all the permutation and combinations if input carriables as per the sensitivity metrics file. With AutoGen millions of files can be generated within a few minutes.

Adams, Mark B↗

A Planning Tool for Estimating Waste Generated by a Radiological Incident and Subsequent Decontamination Efforts - 13569

Management of debris and waste from a wide-area radiological incident would probably constitute a significant percentage of the total remediation cost and effort. The U.S. Environmental Protection Agency's (EPA's) Waste Estimation Support Tool (WEST) is a unique planning tool for estimating the potential volume and radioactivity levels of waste generated by a radiological incident and subsequent decontamination efforts. The WEST was developed to support planners and decision makers by generating a first-order estimate of the quantity and characteristics of waste resulting from a radiological incident. The tool then allows the user to evaluate the impact of various decontamination/demolition strategies on the waste types and volumes generated. WEST consists of a suite of standalone applications and Esri{sup R} ArcGIS{sup R} scripts for rapidly estimating waste inventories and levels of radioactivity generated from a radiological contamination incident as a function of user-defined decontamination and demolition approaches. WEST accepts Geographic Information System (GIS) shape-files defining contaminated areas and extent of contamination. Building stock information, including square footage, building counts, and building composition estimates are then generated using the Federal Emergency Management Agency's (FEMA's) Hazus{sup R}-MH software. WEST then identifies outdoor surfaces based on the application of pattern recognition to overhead aerial imagery. The results from the GIS calculations are then fed into a Microsoft Excel{sup R} 2007 spreadsheet with a custom graphical user interface where the user can examine the impact of various decontamination/demolition scenarios on the quantity, characteristics, and residual radioactivity of the resulting waste streams. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Pumping optimization model for pump and treat systems - 15091

Pump and Treat systems are being utilized to remediate contaminated groundwater in the Hanford 100 Areas adjacent to the Columbia River in Eastern Washington. Design of the systems was supported by a three-dimensional (3D) fate and transport model. This model provided sophisticated simulation capabilities but requires many hours to calculate results for each simulation considered. Many simulations are required to optimize system performance, so a two-dimensional (2D) model was created to reduce run time. The 2D model was developed as a equivalent-property version of the 3D model that derives boundary conditions and aquifer properties from the 3D model. It produces predictions that are very close to the 3D model predictions, allowing it to be used for comparative remedy analyses. Any potential system modifications identified by using the 2D version are verified for use by running the 3D model to confirm performance. The 2D model was incorporated into a comprehensive analysis system (the Pumping Optimization Model, POM) to simplify analysis of multiple simulations. It allows rapid turnaround by utilizing a graphical user interface that: 1 allows operators to create hypothetical scenarios for system operation, 2 feeds the input to the 2D fate and transport model, and 3 displays the scenario results to evaluate performance improvement. All of the above is accomplished within the user interface. Complex analyses can be completed within a few hours and multiple simulations can be compared side-by-side. The POM utilizes standard office computing equipment and established groundwater modeling software. (authors)

54 ENVIRONMENTAL SCIENCES↗

psst: An open-source power system simulation toolbox in Python

This paper is an overview of Power System Simulation Toolbox (psst). psst is an open-source Python application for the simulation and analysis of power system models. psst simulates the wholesale market operation by solving a DC Optimal Power Flow (DCOPF), Security Constrained Unit Commitment (SCUC) and a Security Constrained Economic Dispatch (SCED). psst also includes models for the various entities in a power system such as Generator Companies (GenCos), Load Serving Entities (LSEs) and an Independent System Operator (ISO). psst features an open modular object oriented architecture that will make it useful for researchers to customize, expand, experiment beyond solving traditional problems. psst also includes a web based Graphical User Interface (GUI) that allows for user friendly interaction and for implementation on remote High Performance Computing (HPCs) clusters for parallelized operations. This paper also provides an illustrative application of psst and benchmarks with standard IEEE test cases to show the advanced features and the performance of toolbox.

97 MATHEMATICS AND COMPUTING↗

JAva GUi for Applied Research (JAGUAR) v 3.0

JAGUAR is a Java software tool for automatically rendering a graphical user interface (GUI) from a structured input specification. It is designed as a plug-in to the Eclipse workbench to enable users to create, edit, and externally execute analysis application input decks and then view the results. JAGUAR serves as a GUI for Sandia's DAKOTA software toolkit for optimization and uncertainty quantification. It will include problem (input deck)set-up, option specification, analysis execution, and results visualization. Through the use of wizards, templates, and views, JAGUAR helps uses navigate the complexity of DAKOTA's complete input specification. JAGUAR is implemented in Java, leveraging Eclipse extension points and Eclipse user interface. JAGUAR parses a DAKOTA NIDR input specification and presents the user with linked graphical and plain text representations of problem set-up and option specification for DAKOTA studies. After the data has been input by the user, JAGUAR generates one or more input files for DAKOTA, executes DAKOTA, and captures and interprets the results

Chan, Ethan↗

CO₂ Storage prospeCtive Resource Estimation Excel aNalysis (CO₂-SCREEN) User’s Manual

This user’s manual guides the use of the National Energy Technology Laboratory’s (NETL) CO₂ Storage prospeCtive Resource Estimation Excel aNalysis (CO₂-SCREEN) tool, which was developed to aid users screening geologic formations for prospective CO₂ storage resources. This manual is specific to the CO₂-SCREEN 4.0 version which is based in Python. CO₂-SCREEN applies U.S. Department of Energy (DOE) methods and equations for estimating prospective CO₂ storage resources for saline formations, shale formations, and residual oil zones (ROZ). CO₂-SCREEN was developed to be substantive and user-friendly and provide a consistent method for calculating prospective CO₂ storage resources. CO₂-SCREEN uses a Java based graphical user interface for data inputs and uses Python to calculate prospective CO₂ storage resources.

54 ENVIRONMENTAL SCIENCES↗

Enhancements to the RAVEN code in FY16

The RAVEN code has been under development at the Idaho National Laboratory since 2012. Its main goal is to create a multi-purpose platform for the deploying of all the capabilities needed for Probabilistic Risk Assessment, uncertainty quantification, data mining analysis and optimization studies. RAVEN has currently reached a good level of maturity in terms of deployed state-of-art and advanced capabilities. The main subject of this report is to show the activities that have been recently accomplished: • Implementation of ensemble modeling for time-series, and • initial implementation of model validation for surrogate models, and • advanced visualization capability for topology based data analysis The development of ensemble modeling for time-series has been performed in order to begin tackling the needs of those RISMC applications that need to communicate 1-Dimensional information (e.g. power histories, etc.) among different models. In this document the implementation details and an application example is reported. The second subject of this report is about the initial development of methods, within the RAVEN framework, to assess the validity of the predictive capabilities of surrogate models. Indeed, after the construction of a surrogate tight to a certain physical model, it is crucial to assess the goodness of its representation, in order to be confident with its prediction. In this initial activity, a cross-validation technique has been employed. This report will highlight the implementation details and proof its correct implementation by an application example. The final subject of this report is about the implementation of advanced visualization capability in RAVEN, for interactive data analysis. Indeed, RAVEN offers several post-processing capabilities that can structurally decompose data extracted from experimental results offering both data clustering/partitioning and dimensionality reduction techniques. A disadvantage of the workflow available in RAVEN is that it treats these as black box operations and the user is expected to know specific information about their data including the number of partitions to expect in some cases or the “correct” parameter settings for a particular algorithm. In order to overcome this limitation, it has been added an interactive user interface that can be run in RAVEN to explore different parameter settings on the fly specifically for the topological post-processor and allows the user to explore the data interactively. The design of this user interface is generalizable to other algorithms and can be used as a model to generate more dynamic and user-friendly visualization capabilities within RAVEN.

97 MATHEMATICS AND COMPUTING↗

Refreshing Waste Tracking Software for the 2020's - 20059

The Waste Compliance and Tracking System (WCATS) is a software application designed to manage waste operations from cradle to grave. The system provides the support needed for characterization, generation, processing, and shipment of all waste generated or stored at Los Alamos National Laboratory (LANL). Waste is tracked with task records for containers in real-time via both desktop and mobile device applications. The software allows application administrators to configure sites with appropriate limits for Pu-239 equivalent Curies (PE-Ci), fissile gram equivalents (FGEs), volume limits, as well as custom limits for site-specific technical safety requirements (TSRs). WCATS was developed based on a need at Los Alamos National Laboratory for a modern, customizable waste tracking system that could support many different waste types. The application is built using Oracle{sup R} database and Oracle{sup R} ADF Swing application framework. The technologies and software frameworks selected for the system were finalized in 2006. Although Oracle{sup R} Database has proven to be robust, the user interface and application framework interface with the database have been deprecated and need to be replaced. The technologies selected for modernization follow the open-source model, which allows the WCATS team to more easily recruit developers, improve the speed of development, and ease the deployment and adoption of the system. The tools that support the re-engineering effort are Vue.js{sup R}, a JavaScript{sup R} framework, and Spring Boot{sup R}, an API (application programming interface) development tool written in Java{sup R}. An API allows for simplified communication from the database to the user interface of the application. In addition, legacy Crystal Reports{sup R} will be replaced with reports developed with the open source Pentaho{sup TM}f Report Designer community edition. Because the application uses HTML and JavaScript{sup R}, it builds upon tools that have been used for many years in web development. These tools have large community support and their proven track record will ensure that enhancements to WCATS can continue for years to come. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Interactive Supercomputing With Jupyter

Rich user interfaces like Jupyter have the potential to make interacting with a supercomputer easier and more productive, consequently attracting new kinds of users and helping to expand the application of supercomputing to new science domains. For the scientist-user, the ideal rich user interface delivers a familiar, responsive, introspective, modular, and customizable platform upon which to build, run, capture, document, re-run, and share analysis workflows. From the provider or system administrator perspective, such a platform would also be easy to configure, deploy securely, update, customize, and support. Jupyter checks most if not all of these boxes. But from the perspective of leadership computing organizations that provide supercomputing power to users, such a platform should also make the unique features of a supercomputer center more accessible to users and more composable with high performance computing (HPC) workflows. Project Jupyter’s core design philosophy of extensibility, abstraction, and agnostic deployment, has allowed HPC centers like NERSC to bring in advanced supercomputing capabilities that can extend the interactive notebook environment. This has enabled a rich scientific discovery platform, particularly for experimental facility data analysis and machine learning problems.

97 MATHEMATICS AND COMPUTING↗

The Weatherization Assistant User's Manual (Version 8.9)

The Weatherization Assistant is a Windows-based energy audit software tool that was developed by Oak Ridge National Laboratory (ORNL) to help states and their local weatherization agencies implement the U.S. Department of Energy (DOE) Weatherization Assistance Program. The Weatherization Assistant is an umbrella program for two individual energy audits or measure selection programs: the National Energy Audit Tool (NEAT) for site-built single-family homes and the Manufactured Home Energy Audit (MHEA) for mobile homes. The Weatherization Assistant User's Manual documents the operation of the user interface for Version 8.9 of the software. This includes how to install and setup the software, navigate through the program, and initiate an energy audit. All of the user interface forms associated with the software and the data fields on these forms are described in detail. The manual is intended to be a training manual for new users of the Weatherization Assistant and as a reference manual for experienced users.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Xi-cam : a versatile interface for data visualization and analysis

Xi-cam is an extensible platform for data management, analysis and visualization. Xi-cam aims to provide a flexible and extensible approach to synchrotron data treatment as a solution to rising demands for high-volume/high-throughput processing pipelines. The core of Xi-cam is an extensible plugin-based graphical user interface platform which provides users with an interactive interface to processing algorithms. Plugins are available for SAXS/WAXS/GISAXS/GIWAXS, tomography and NEXAFS data. With Xi-cam 's `advanced' mode, data processing steps are designed as a graph-based workflow, which can be executed live, locally or remotely. Remote execution utilizes high-performance computing or de-localized resources, allowing for the effective reduction of high-throughput data. Xi-cam 's plugin-based architecture targets cross-facility and cross-technique collaborative development, in support of multi-modal analysis. Xi-cam is open-source and cross-platform, and available for download on GitHub.

Pandolfi, Ronald J. (ORCID:0000000308248548)↗

Institutional Transformation (IX) 2.5 Building Module Help Manual

The Institutional Transformation (IX) building module is a software tool developed at Sandia National Laboratories to evaluate energy conservation measures (ECMs) on hundreds of DOE-2 building energy models simultaneously. In IX, ECMs can be designed through parameterizing DOE-2 building models and doing further processing via visual basic for applications subroutines. IX provides the functionality to handle multiple building models for different years, which enables incrementally changing a site of hundreds of buildings over time. It also enables evaluation of the effects of changing climate, comparisons between data and modeling results, and energy use of centralized utility buildings (CUBs). IX consists of a Microsoft Excel® user interface, Microsoft Access® database, and Microsoft Excel® CUB build utility whose functionalities are described in detail in this report. In addition to descriptions of the user interfaces, descriptions of every ECM already designed in IX is included.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Summary of Information Available and Recommendations for a Doe Complex-Wide Waste Glass Database

The purpose of this document is to summarize the existing repositories of nuclear waste glass property-composition data produced for DOE. A framework is described for consolidation of the data into a single database. Recommended attributes of the consolidated database are provided, including quality assurance, the user interface, and means for updates and maintenance. Future work will utilize the framework described herein to produce the complex-wide database and establish the user interface.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

National Geothermal Data System: Transforming the Discovery, Access, and Analytics of Data for Geothermal Exploration

Compendium of Papers from the 38th Workshop on Geothermal Reservoir Engineering Stanford University, Stanford, California February 11-13, 2013 The National Geothermal Data System (NGDS) is a distributed, interoperable network of data collected from state geological surveys across all fifty states and the nation’s leading academic geothermal centers. The system serves as a platform for sharing consistent, reliable, geothermal-relevant technical data with users of all types, while supplying tools relevant for their work. As aggregated data supports new scientific findings, this content-rich linked data ultimately broadens the pool of knowledge available to promote discovery and development of commercial-scale geothermal energy production. Most of the up-front risks associated with geothermal development stem from exploration and characterization of subsurface resources. Wider access to distributed data will, therefore, result in lower costs for geothermal development. NGDS is on track to become fully operational by 2014 and will provide a platform for custom applications for accessing geothermal relevant data in the U.S. and abroad. It is being built on the U.S. Geoscience Information Network (USGIN) data integration framework to promote interoperability across the Earth sciences community. The basic structure of the NGDS employs state-of-the art informatics to advance geothermal knowledge. The following four papers comprising this Open-File Report are a compendium of presentations, from the 38th Annual Workshop on Geothermal Reservoir Engineering, taking place February 11-13, 2013 at Stanford University, Stanford, California. “NGDS Geothermal Data Domain: Assessment of Geothermal Community Data Needs,” outlines the efforts of a set of nationwide data providers to supply data for the NGDS. In particular, data acquisition, delivery, and methodology are discussed. The paper addresses the various types of data and metadata required and why simple links to existing data are insufficient for promoting geothermal exploration. Authors of this paper are Arlene Anderson, US DOE Geothermal Technologies Office, David Blackwell, Southern Methodist University (SMU), Cathy Chickering (SMU), Toni Boyd, Oregon Institute of Technology’s GeoHeat Center, Roland Horne, Stanford University, Matthew MacKenzie, Uberity, Joe Moore, University of Utah, Duane Nickull, Uberity, Stephen Richard, Arizona Geological Survey, and Lisa Shevenell, University of Nevada, Reno. “NGDS User Centered Design: Meeting the Needs of the Geothermal Community,” discusses the user- centered design approach taken in the development of a user interface solution for the NGDS. The development process is research based, highly collaborative, and incorporates state-of-the-art practices to ensure a quality user interface for the widest and greatest utility. Authors of this paper are Harold Blackman, Boise State University, Suzanne Boyd, Anthro-Tech, Kim Patten, Arizona Geological Survey, and Sam Zheng, Siemens Corporate Research. “Fueling Innovation and Adoption by Sharing Data on the DOE Geothermal Data Repository Node on the National Geothermal Data System,” describes the motivation behind the development of the Geothermal Data Repository (GDR) and its role in the NGDS. This includes the benefits of using the GDR to share geothermal data of all types and DOE’s data submission process. Authors of this paper are Jon Weers, National Renewable Energy Laboratory and Arlene Anderson, US DOE Geothermal Technologies Office. Finally, “Developing the NGDS Adoption of CKAN for Domestic & International Data Deployment,” provides an overview of the “Node-In-A-Box” software package designed to provide data consumers with a highly functional interface to access the system, and to ease the burden on data providers who wish to publish data in the system. It is important to note that this software package constitutes a reference implementation and that the NGDS architecture is based on open standards, which means other server software can make resources available, and other client applications can utilize NGDS data. Authors of this paper are Ryan Clark, Arizona Geological Survey (AZGS), Christoph Kuhmuench, Siemens Corporate Research, and Stephen Richard, AZGS.

15 GEOTHERMAL ENERGY↗

Luminaires for Advanced Lighting in Education

Evolving education methods and greater use of technology in the classroom are dictating the need to rethink facility designs, including classroom lighting. Advances in LED-based lighting technology have created the possibility of lighting systems that are not only cost effective and energy efficient, but also color-tunable and as durable as other facility infrastructures (a 20-30 year life expectancy). Thus, there is the opportunity that the modern lighting system can be used by educators as a tool in their teaching strategy. To meet this need, RTI International and Finelite, Inc. teamed to develop and test the Next Generation Integrated Classroom Lighting System (NICLS). The NICLS technology incorporates a high performance, color-tunable light engine into new luminaire designs (e.g., pendant, direct-indirect, downlight, troffers) that are acceptable for use in classrooms. During this project, we successfully demonstrated that the NICLS technology achieves exceptional performance and exceeds all DOE goals for the classroom of the future, including: Luminous efficacy value for NICLS luminaires in excess of 125 lpw at all CCT values; TWL range of 2,700 K to 6,500 K while maintaining a CRI of 82 or higher at all values; Capability for full-range dimming (100% to 1%) at all CCT values with flicker levels below industry guidelines; Performance of the lighting system in a classroom mock-up, incorporating daylight and occupancy sensing to provide automatic control of lighting zones to further reduce energy consumption; Rated lifetime on the system exceeding 50,000 hours with a lumen maintenance of at least 85% at 50,000 hours; and Teacher-focused UI located at the front of the classroom to operate the lighting system. A smartphone-based UI is also available to accommodate teacher movement in the classroom. A critical element of developing this technology is designing the user interface to be compatible with modern teaching methods, including increased use of icons and colors and intuitive appearance. The design of the NICLS technology and the user interface was modified with assistance from focus groups consisting of more than 80 teachers and educational professionals total. The focus groups were held in a full-sized classroom that served as a technology demonstration site for the NICLS. The NICLS technology is an advanced lighting system for educational settings that meets or exceeds all DOE photometric, electrical, and reliability goals for the COF. The NICLS technology has been demonstrated at the classroom level, and the feedback from the dozens of teachers and educational professionals who visited the demonstration site has been overwhelmingly positive. NICLS provides a state-of-the-art lighting environment that adjusts the lighting conditions—both color and illuminance levels—to the needs of students and teachers for the task at hand. Early research has suggested that such lighting conditions will improve not only teacher effectiveness but also a student’s ability to concentrate on learning activities.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Software Requirements of SNAP for Editing MELCOR 2.2 Models

Applications of the severe accident analysis code MELCOR, developed for the U.S. Nuclear Regulatory Commission (NRC) by Sandia National Laboratories (SNL), have been supported by the graphical user-interface and post-processing suite Symbolic Nuclear Analysis Package (SNAP), developed for the NRC by Applied Programming Technology (APT). With the release of MELCOR 2.2, new user functionality and models have been introduced and an update to the SNAP MELCOR plugin user interface is necessary to access these new features. This document relates all new features introduced into MELCOR to the development team at APT as well as the NRC.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

RESolution Project Management Tool

The Resolution Project Management Tool is designed to provide a light, yet comprehensive, application to facilitate the management of scientific and research and development projects. The approach to the tool is minimalistic in nature; only require the minimum, essential information needed to facilitate the management of a project and display it in a simple, noncomplex format. The simple platform provides for the collaborative identification, monitoring and status of the essential elements of a project: scope, schedule, cost, risks, changes and reporting. Additionally, the tool provides the ability to create and monitor portfolios of projects without complex or over-burdensome user interfaces or data requirements. The novelty of the tool is the unique selectivity of the data required to manage a project combined with the simple and clear user interface.

Capps, Greg↗