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At least 163 records · Page 9

Pan-Arctic Permafrost Subsidence [Slides]

The Arctic is warming twice as fast as the rest of the globe, resulting in dramatic loss of ice across the Arctic system. Models project 7% to 90% of permafrost could be lost by the end of the century. Permafrost thaw is driving landscape degradation and infrastructure disruption through thermokarst and thermal erosion. Previous pan-arctic modeling shows potential for significant subsidence (Lee et al. 2014). CLM4.5 pan-Arctic simulations from PCNMIP were used to calculate change in projected ALT from 2010-2030.

54 ENVIRONMENTAL SCIENCES↗

Finding the missing pieces: filling gaps that impede the translation of omics data into models

High-throughput omics technologies such as DNA sequencing have made the sequencing and computational assembly of microbial genomes recovered from the environment relatively routine. Computational inference of the protein products encoded by these genomes, and the associated biochemical functions, should enable the accurate prediction and modeling of microbial metabolism, organismal interactions, and ecosystem processes. However, a lack of scalable, probabilistic protein annotation tools limits the full potential of modeling for understanding the metabolism and biogeochemical cycles of microbial communities. Our approach to improve inference of protein annotations and metabolic models relied on learning from and emulating expert manual curation, leveraging software engineering and data science best practices to scale up the throughput and accuracy of annotations and metabolic model construction, building software to objectively evaluate different annotation strategies, and more closely linking the protein annotation and metabolic model inference process. Outcomes of this research include several improved or new computational tools, including DRAM (Distilled and Refined Annotation of Metabolism) for annotating microbial genomes with protein function and metabolic traits, CAMPER (Curated Annotations for Microbial Polyphenol Enzymes and Reactions) for annotating key polyphenol metabolisms, EC-Bench for comprehensive and unbiased benchmarking of annotation tools, and several apps available via the DOE Systems Biology Knowledgebase (KBase) for building genome-scale metabolic models. We demonstrate that these tools allow us to scalably annotate and understand thousands of genomes for microbial communities from a variety of systems and test cases, including rivers, thawing permafrost, and gut microbiomes. All of these computational tools are available as open-source software, with most broadly and easily accessible to the scientific community via KBase apps.

59 BASIC BIOLOGICAL SCIENCES↗

High-Resolution Spatio-Temporal Estimation of Net Ecosystem Exchange in Ice-Wedge Polygon Tundra Using In Situ Sensors and Remote Sensing Data

Land-atmosphere carbon exchange is known to be extremely heterogeneous in arctic ice-wedge polygonal tundra regions. In this study, a Kalman filter-based method was developed to estimate the spatio-temporal dynamics of daytime average net ecosystem exchange (NEEday) at 0.5-m resolution over a 550 m by 700 m study site. We integrated multi-scale, multi-type datasets, including normalized difference vegetation indices (NDVIs) obtained from a novel automated mobile sensor system (or tram system) and a greenness index map obtained from airborne imagery. We took advantage of the significant correlations between NDVI and NEEday identified based on flux chamber measurements. The weighted average of the estimated NEEday within the flux-tower footprint agreed with the flux tower data in term of its seasonal dynamics. We then evaluated the spatial variability of the growing season average NEEday, as a function of polygon geomorphic classes; i.e., the combination of polygon types—which are known to present different degradation stages associated with permafrost thaw—and microtopographic features (i.e., troughs, centers and rims). Our study suggests the importance of considering microtopographic features and their spatial coverage in computing spatially aggregated carbon exchange.

54 ENVIRONMENTAL SCIENCES↗

Using atmospheric observations to quantify annual biogenic carbon dioxide fluxes on the Alaska North Slope

The continued warming of the Arctic could release vast stores of carbon into the atmosphere from high-latitude ecosystems, especially from thawing permafrost. Increasing uptake of carbon dioxide (CO 2 ) by vegetation during longer growing seasons may partially offset such release of carbon. However, evidence of significant net annual release of carbon from site-level observations and model simulations across tundra ecosystems has been inconclusive. To address this knowledge gap, we combined top-down observations of atmospheric CO 2 concentration enhancements from aircraft and a tall tower, which integrate ecosystem exchange over large regions, with bottom-up observed CO 2 fluxes from tundra environments and found that the Alaska North Slope is not a consistent net source nor net sink of CO 2 to the atmosphere (ranging from ₋6 to +6 Tg C yr -1 for 2012–2017). Our analysis suggests that significant biogenic CO 2 fluxes from unfrozen terrestrial soils, and likely inland waters, during the early cold season (September–December) are major factors in determining the net annual carbon balance of the North Slope, implying strong sensitivity to the rapidly warming freeze-up period. At the regional level, we find no evidence of the previously reported large late-cold-season (January–April) CO 2 emissions to the atmosphere during the study period. Despite the importance of the cold-season CO 2 emissions to the annual total, the interannual variability in the net CO 2 flux is driven by the variability in growing season fluxes. During the growing season, the regional net CO 2 flux is also highly sensitive to the distribution of tundra vegetation types throughout the North Slope. This study shows that quantification and characterization of year-round CO 2 fluxes from the heterogeneous terrestrial and aquatic ecosystems in the Arctic using both site-level and atmospheric observations are important to accurately project the Earth system response to future warming.

54 ENVIRONMENTAL SCIENCES↗

Hector V3.2.0: functionality and performance of a reduced-complexity climate model

Abstract. Hector is an open-source reduced-complexity climate–carbon cycle model that models critical Earth system processes on a global and annual basis. Here, we present an updated version of the model, Hector V3.2.0 (hereafter Hector V3), and document its new features, implementation of new science, and performance. Significant new features include permafrost thaw, a reworked energy balance submodel, and updated parameterizations throughout. Hector V3 results are in good general agreement with historical observations of atmospheric CO2 concentrations and global mean surface temperature, and the future temperature projections from Hector V3 are consistent with more complex Earth system model output data from the sixth phase of the Coupled Model Intercomparison Project. We show that Hector V3 is a flexible, performant, robust, and fully open-source simulator of global climate changes. We also note its limitations and discuss future areas for improvement and research with respect to the model's scientific, stakeholder, and educational priorities.

54 ENVIRONMENTAL SCIENCES↗

Soil moisture and hydrology projections of the permafrost region – a model intercomparison

Abstract. This study investigates and compares soil moisture and hydrology projections of broadly used land models with permafrost processes and highlights the causes and impacts of permafrost zone soil moisture projections. Climate models project warmer temperatures and increases in precipitation (P) which will intensify evapotranspiration (ET) and runoff in land models. However, this study shows that most models project a long-term drying of the surface soil (0–20 cm) for the permafrost region despite increases in the net air–surface water flux (P-ET). Drying is generally explained by infiltration of moisture to deeper soil layers as the active layer deepens or permafrost thaws completely. Although most models agree on drying, the projections vary strongly in magnitude and spatial pattern. Land models tend to agree with decadal runoff trends but underestimate runoff volume when compared to gauge data across the major Arctic river basins, potentially indicating model structural limitations. Coordinated efforts to address the ongoing challenges presented in this study will help reduce uncertainty in our capability to predict the future Arctic hydrological state and associated land–atmosphere biogeochemical processes across spatial and temporal scales.

54 ENVIRONMENTAL SCIENCES↗

The importance of freeze–thaw cycles for lateral tracer transport in ice-wedge polygons

Abstract. A significant portion of the Arctic coastal plain is classified as polygonal tundra and plays a vital role in soil carbon cycling. Recent research suggests that lateral transport of dissolved carbon could exceed vertical carbon releases to the atmosphere. However, the details of lateral subsurface flow in polygonal tundra have not been well studied. We incorporated a subsurface transport process into an existing state-of-the-art hydrothermal model. The model captures the physical effects of freeze–thaw cycles on lateral flow in polygonal tundra. The new modeling capability enables non-reactive tracer movement within subsurface. We utilized this new capability to investigate the impact of freeze–thaw cycles on lateral flow in the polygonal tundra. Our study indicates the important role of freeze–thaw cycles and the freeze-up effect in lateral tracer transport, suggesting that dissolved species could be transported from the middle of the polygon to the sides within a couple of thaw seasons. Introducing lateral carbon transport into the climate models could substantially reduce the uncertainty associated with the impact of thawing permafrost.

54 ENVIRONMENTAL SCIENCES↗

Environmental controls on observed spatial variability of soil pore water geochemistry in small headwater catchments underlain with permafrost

Abstract. Soil pore water (SPW) chemistry can vary substantially across multiple scales in Arctic permafrost landscapes. The magnitude of these variations and their relationship to scale are critical considerations for understanding current controls on geochemical cycling and for predicting future changes. These aspects are especially important for Arctic change modeling where accurate representation of sub-grid variability may be necessary to predict watershed-scale behaviors. Our research goal is to characterize intra- and inter-watershed soil water geochemical variations at two contrasting locations in the Seward Peninsula of Alaska, USA. We then attempt to identify the key factors controlling concentrations of important pore water solutes in these systems. The SPW geochemistry of 18 locations spanning two small Arctic catchments was examined for spatial variability and its dominant environmental controls. The primary environmental controls considered were vegetation, soil moisture and/or redox condition, water–soil interactions and hydrologic transport, and mineral solubility. The sampling locations varied in terms of vegetation type and canopy height, presence or absence of near-surface permafrost, soil moisture, and hillslope position. Vegetation was found to have a significant impact on SPW NO3- concentrations, associated with the localized presence of nitrogen-fixing alders and mineralization and nitrification of leaf litter from tall willow shrubs. The elevated NO3- concentrations were, however, frequently equipoised by increased microbial denitrification in regions with sufficient moisture to support it. Vegetation also had an observable impact on soil-moisture-sensitive constituents, but the effect was less significant. The redox conditions in both catchments were generally limited by Fe reduction, seemingly well-buffered by a cache of amorphous Fe hydroxides, with the most reducing conditions found at sampling locations with the highest soil moisture content. Non-redox-sensitive cations were affected by a wide variety of water–soil interactions that affect mineral solubility and transport. Identification of the dominant controls on current SPW hydrogeochemistry allows for qualitative prediction of future geochemical trends in small Arctic catchments that are likely to experience warming and permafrost thaw. As source areas for geochemical fluxes to the broader Arctic hydrologic system, geochemical processes occurring in these environments are particularly important to understand and predict with regards to such environmental changes.

Conroy, Nathan Alec (ORCID:0000000305973373)↗

The IsoGenie database: an interdisciplinary data management solution for ecosystems biology and environmental research

Modern microbial and ecosystem sciences require diverse interdisciplinary teams that are often challenged in “speaking” to one another due to different languages and data product types. Here we introduce the IsoGenie Database, a de novo developed data management and exploration platform, as a solution to this challenge of accurately representing and integrating heterogenous environmental and microbial data across ecosystem scales. The IsoGenieDB is a public and private data infrastructure designed to store and query data generated by the IsoGenie Project, a ~10 year DOE-funded project focused on discovering ecosystem climate feedbacks in a thawing permafrost landscape. The IsoGenieDB provides (i) a platform for IsoGenie Project members to explore the project’s interdisciplinary datasets across scales through the inherent relationships among data entities, (ii) a framework to consolidate and harmonize the datasets needed by the team’s modelers, and (iii) a public venue that leverages the same spatially explicit, disciplinarily integrated data structure to share published datasets. The IsoGenieDB is also being expanded to cover the NASA-funded Archaea to Atmosphere (A2A) project, which scales the findings of IsoGenie to a broader suite of Arctic peatlands, via the umbrella A2A Database (A2A-DB). The IsoGenieDB’s expandability and flexible architecture allow it to serve as an example ecosystems database.

54 ENVIRONMENTAL SCIENCES↗

Atmospheric Composition Change: Climate-Chemistry Interactions

Chemically active climate compounds are either primary compounds such as methane (CH4), removed by oxidation in the atmosphere, or secondary compounds such as ozone (O3), sulfate and organic aerosols, formed and removed in the atmosphere. Man-induced climate-chemistry interaction is a two-way process: Emissions of pollutants change the atmospheric composition contributing to climate change through the aforementioned climate components, and climate change, through changes in temperature, dynamics, the hydrological cycle, atmospheric stability, and biosphere-atmosphere interactions, affects the atmospheric composition and oxidation processes in the troposphere. Here we present progress in our understanding of processes of importance for climate-chemistry interactions, and their contributions to changes in atmospheric composition and climate forcing. A key factor is the oxidation potential involving compounds such as O3 and the hydroxyl radical (OH). Reported studies represent both current and future changes. Reported results include new estimates of radiative forcing based on extensive model studies of chemically active climate compounds such as O3, and of particles inducing both direct and indirect effects. Through EU projects such as ACCENT, QUANTIFY, and the AEROCOM project, extensive studies on regional and sector-wise differences in the impact on atmospheric distribution are performed. Studies have shown that land-based emissions have a different effect on climate than ship and aircraft emissions, and different measures are needed to reduce the climate impact. Several areas where climate change can affect the tropospheric oxidation process and the chemical composition are identified. This can take place through enhanced stratospheric-tropospheric exchange of ozone, more frequent periods with stable conditions favouring pollution build up over industrial areas, enhanced temperature-induced biogenic emissions, methane releases from permafrost thawing, and enhanced concentration through reduced biospheric uptake. During the last 510 years, new observational data have been made available and used for model validation and the study of atmospheric processes. Although there are significant uncertainties in the modelling of composition changes, access to new observational data has improved modelling capability. Emission scenarios for the coming decades have a large uncertainty range, in particular with respect to regional trends, leading to a significant uncertainty range in estimated regional composition changes and climate impact.

Atmosphere climate chemistry↗

Uncertainty Analysis for the Miniaturized Laser Heterodyne Radiometer (mini-LHR)

Presented here is a sensitivity analysis for the miniaturized laser heterodyne radiometer (mini-LHR). This passive, ground-based instrument measures carbon dioxide (CO2) in the atmospheric column and has been under development at NASA/GSFC since 2009. The goal of this development is to produce a low-cost, easily-deployable instrument that can extend current ground measurement networks in order to (1) validate column satellite observations, (2) provide coverage in regions of limited satellite observations, (3) target regions of interest such as thawing permafrost, and (4) support the continuity of a long-term climate record. In this paper an uncertainty analysis of the instrument performance is presented and compared with results from three sets of field measurements. The signal-to-noise ratio (SNR) and corresponding uncertainty for a single scan are calculated to be 329.4+/-1.3 by deploying error propagation through the equation governing the SNR. Reported is an absorbance noise of 0.0024 for 6 averaged scans of field data, for an instrument precision of approximately 0.2 ppmv for CO2.

carbon dioxide (CO2)↗

CARVE: The Carbon in Arctic Reservoirs Vulnerability Experiment

The Carbon in Arctic Reservoirs Vulnerability Experiment (CARVE) is a NASA Earth Ventures (EV-1) investigation designed to quantify correlations between atmospheric and surface state variables for the Alaskan terrestrial ecosystems through intensive seasonal aircraft campaigns, ground-based observations, and analysis sustained over a 5-year mission. CARVE bridges critical gaps in our knowledge and understanding of Arctic ecosystems, linkages between the Arctic hydrologic and terrestrial carbon cycles, and the feedbacks from fires and thawing permafrost. CARVE's objectives are to: (1) Directly test hypotheses attributing the mobilization of vulnerable Arctic carbon reservoirs to climate warming; (2) Deliver the first direct measurements and detailed maps of CO2 and CH4 sources on regional scales in the Alaskan Arctic; and (3) Demonstrate new remote sensing and modeling capabilities to quantify feedbacks between carbon fluxes and carbon cycle-climate processes in the Arctic (Figure 1). We describe the investigation design and results from 2011 test flights in Alaska.

Arctic Carbon Cycle↗

Using Unmanned Air Systems to Monitor Methane in the Atmosphere

Methane is likely to be an important contributor to global warming, and our current knowledge of its sources, distributions, and transport is insufficient. It is estimated that there could be from 7.5 to 400 billion tons carbon-equivalent of methane in the arctic region, a broad range that is indicative of the uncertainty within the Earth Science community. Unmanned Air Systems (UASs) are often used for combat or surveillance by the military, but they also have been used for Earth Science field missions. In this study, we will analyze the utility of the NASA Global Hawk and the Aurora Flight Sciences Orion UASs compared to the manned DC-8 aircraft for conducting a methane monitoring mission. The mission will focus on the measurement of methane along the boundaries of Arctic permafrost thaw and melting glaciers. The use of Long Endurance UAS brings a new range of possibilities including the ability to obtain long- term and persistent observations and to significantly augment methane measurements/retrievals collected by satellite. Furthermore, we discuss the future of long endurance UAS and their potential for science applications in the next twenty to twenty-five years.

Clow, Jacqueline↗

On the Ability of Space- Based Passive and Active Remote Sensing Observations of CO2 to Detect Flux Perturbations to the Carbon Cycle

Space-borne observations of CO2 are vital to gaining understanding of the carbon cycle in regions of the world that are difficult to measure directly, such as the tropical terrestrial biosphere, the high northern and southern latitudes, and in developing nations such as China. Measurements from passive instruments such as GOSAT (Greenhouse Gases Observing Satellite) and OCO-2 (Orbiting Carbon Observatory 2), however, are constrained by solar zenith angle limitations as well as sensitivity to the presence of clouds and aerosols. Active measurements such as those in development for the Active Sensing of CO2 Emissions over Nights, Days and Seasons (ASCENDS) mission show strong potential for making measurements in the high-latitude winter and in cloudy regions. In this work we examine the enhanced flux constraint provided by the improved coverage from an active measurement such as ASCENDS. The simulation studies presented here show that with sufficient precision, ASCENDS will detect permafrost thaw and fossil fuel emissions shifts at annual and seasonal time scales, even in the presence of transport errors, representativeness errors, and biogenic flux errors. While OCO-2 can detect some of these perturbations at the annual scale, the seasonal sampling provided by ASCENDS provides the stronger constraint. Plain Language Summary: Active and passive remote sensors show the potential to provide unprecedented information on the carbon cycle. With the all-season sampling, active remote sensors are more capable of constraining high-latitude emissions. The reduced sensitivity to cloud and aerosol also makes active sensors more capable of providing information in cloudy and polluted scenes with sufficient accuracy. These experiments account for errors that are fundamental to the top-down approach for constraining emissions, and even including these sources of error, we show that satellite remote sensors are critical for understanding the carbon cycle.

tropical terrestrial biosphere↗

Portable, Low-Cost, Column Carbon Dioxide and Methane Measurements for Validating Satellite Observations in Remote Locations

We present a low-cost (~$10K per instrument), portable solution to ground-based validation of satellite observations for difficult to reach locations with precisions of 1 ppm XCO2 and 10 ppb XCH4 for hourly data products. While Total Carbon Column Observing Network (TCCON) is the gold-standard for ground validation, there are locations where a ground column validation data point would be useful but conditions are not conducive to a permanent station. Examples include wetlands, thawing permafrost, the tropics, the Amazon, sub-Saharan Africa, as well as locations without a power grid or with geopolitical conflict. In addition, the low-cost and portability mean a geographical region can be studied in depth with multiple instruments. This passive, sun-pointing instrument is a miniaturized, laser heterodyne radiometer (mini-LHR) that has been under development by our team since 2009. It can be operated either in tandem with AERONET (a global network of 500 instruments that measure aerosol optical depth), or as a stand-alone instrument with a low-cost (~$3K), light-weight sun tracker. One of the main benefits of the mini-LHR is that it can quickly reach remote locations and provide a validation measurement even if there is limited or no infrastructure at the site. The instrument weighs ~10 lbs, fits into a backpack, and is powered by two folding solar panels and a battery pack. In clear conditions, the instrument can be set-up in under an hour. Portability means that mini-LHRs can be easily moved for side-by-side comparisons with other mini-LHRs and with TCCON which simplifies assessing instrument bias as well as accuracy. Like TCCON, the mini-LHR points directly at the sun with a narrow field-of-view and is its insensitivity to cloud and aerosol scattering that is common to nadir-pointing passive satellite approaches. Here we present a collection of sample data sets to demonstrate performance from locations that vary in climate, altitude, solar zenith angle, hours of sun per day, etc., as well as data from side-by-side TCCON comparisons. Retrievals of CO2 and CH4 were completed using the NASA/Goddard's Planetary Spectrum Generator (PSG) that incorporates meteorological inputs from Modern-Era Retrospective analysis for Research and Applications, Version 2 (MERRA-2) data set.

Wilson, Emily W.↗

Rapid Expansion of Northern Peatlands and Doubled Estimate of Carbon Storage

Northern peatlands are an integral part of the global carbon cycle—a strong sink of atmospheric carbon dioxide and source of methane. Increasing anthropogenic carbon dioxide and methane in the atmosphere are thought to strongly impact these environments, and yet, peatlands are not routinely included in Earth system models. Here we present a quantification of the sink and stock of northern peat carbon from the last glacial period through the pre-industrial period. Additional data and new algorithms for reconstructing the history of peat carbon accumulation and the timing of peatland initiation increased the estimate of total northern peat carbon stocks from 545 Gt to 1,055 Gt of carbon. Further, the post-glacial increases in peatland initiation rate and carbon accumulation rate are more abrupt than previously reported. Peatlands have been a strong carbon sink throughout the Holocene, but the atmospheric partial pressure of carbon dioxide has been relatively stable over this period. While processes such as permafrost thaw and coral reef development probably contributed some additional carbon to the atmosphere, we suggest that deep ocean upwelling was the most important mechanism for balancing the peatland sink and maintaining the observed stability.

Nichols, Jonathan E.↗

TPSAS-NF1676L-31979-DND

The rapid, and in many cases, unprecedented changes in the Arctic climate system observed since 1979 are having devastating impacts on both natural and human systems. These changes are marked by warming Arctic temperatures, rapid declines in sea ice and snow cover, permafrost thaw, mountain glacier melt, and Greenland Ice Sheet mass loss. A common thread through each of these changes is the impact on the surface energy budget. However, our understanding of the controls on and variability of the Arctic surface energy budget is incomplete and this contributes to the significant biases in the climate models. To better understand the controls on the variability of the Arctic surface energy budget and CMIP5 model biases, we use an atmospheric regime-based perspective of the Arctic surface energy budget decomposing variability by atmospheric dynamic and thermodynamic properties.

Patrick C. Taylor↗

Northeast Alaska Climate: Using Earth Observations to Evaluate Snow Variability through a Climatological Analysis to Support Ecological Monitoring in Northeast Alaska

Alaska is experiencing climate change at an unprecedented rate, with temperatures increasing twice as fast as the national average. The resulting changes to the landscape and ecosystems are significant, including shorter winters, declining snow depth, thawing permafrost, and rapidly receding glaciers. These changes are not only exacerbating the negative impacts of oil exploration but also affecting the food security of indigenous communities that rely on hunting as a subsistence food source. With the US Fish and Wildlife Service managing a potential tundra travel season for the first time in its history, adequate data on historic snow variables is essential to protect the unique habitat of the area. This project used NASA satellite and assimilation system data to inform and improve the current understanding of snow patterns in the Arctic National Wildlife Refuge and the National Petroleum Reserve – Alaska. The DEVELOP team used MODIS Normalized Difference Snow Index data to determine snow season duration, snow change frequency, and the first and last days of snow. The team also utilized the 2.1 Global Land Data Assimilation System and Daymet V4 products to study climatological trends in snow depth and snow water equivalent, respectively, across the study areas. The results of this study give users the capacity to visualize maps of multiple snow variables to monitor changes in snow conditions and proactively prepare for the ecological, cultural, and landscape impacts that changes in snow variability will cause in the future.

Remote Sensing↗