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At least 163 records · Page 9
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Landscape-scale characterization of Arctic tundra vegetation composition, structure, and function with a multi-sensor unoccupied aerial system

The Arctic is experiencing some of the most rapid climate change on Earth, with strong impacts on tundra ecosystems that are characterized by high land-surface and vegetation heterogeneity. Previous studies have explored this complexity using satellite remote sensing, however these typically coarse spatial resolution data have generally missed sub-pixel heterogeneity, leaving critical gaps in our understanding of tundra vegetation dynamics from the community to landscape scales. To address these gaps, we collected very high-resolution (1-5 cm) optical, structural, and thermal data at three low-Arctic tundra sites on the Seward Peninsula, Alaska, using a multi-sensor unoccupied aerial system (UAS). We examined the application of these data to studying tundra vegetation dynamics, by quantifying (1) canopy height and thermoregulation (leaf-air temperature) of representative plant functional types (PFTs), (2) fine-scale patterns of vegetation composition across landscapes, and (3) impacts of fine-scale vegetation composition on landscape-scale variation of canopy height and thermoregulation. Our results show that deciduous tall shrubs (those that can potentially grow >2 m) had a strong cooling effect, with canopy temperatures significantly lower than local air temperatures and other PFTs. Increased cover of tall shrubs also had the potential to reduce the cover of low-stature PFTs across the landscape, potentially associated with their closed canopy (i.e., increased light competition) and strong thermoregulation. To understand the connections between fine-scale vegetation composition and large-scale ecosystem processes, we produced a random forest model which showed that fine-scale PFT composition accounted for 86.8% and 74.2% of the landscape-scale variation in canopy height and thermoregulation, respectively. These findings highlight the importance of spatially detailed characterization of tundra PFTs to improve our ecological understanding and model representation of tundra vegetation, also transcend our study to show the need for continued collection of similar datasets to better understand the impacts of surface heterogeneity on the mapping and modeling of tundra ecosystem dynamics, as well as assist with conservation management and biodiversity monitoring strategies.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Translating macroecological models to predict microbial establishment probability in an agricultural inoculant introduction

The use of potentially beneficial microorganisms in agriculture (microbial inoculants) has rapidly accelerated in recent years. For microbial inoculants to be effective as agricultural tools, these organisms must be able to survive and persist in novel environments while not destabilizing the resident community or spilling over into adjacent natural ecosystems. Despite the importance of propagule pressure to species introductions, few tools exist in microbial ecology to predict the outcomes of agricultural microbial introductions. Here, we adapt a macroecological propagule pressure model to a microbial scale and present an experimental approach for testing the role of propagule pressure in microbial inoculant introductions. We experimentally determined the risk-release relationship for an IAA-expressing Pseudomonas simiae inoculant in a model monocot system. We then used this relationship to simulate establishment outcomes under a range of application frequencies (propagule number) and inoculant concentrations (propagule size). Our simulations show that repeated inoculant applications may increase establishment, even when increased inoculant concentration does not alter establishment probabilities. Applying ecological modeling approaches like those presented here to microbial inoculants may aid their sustainable use and provide a monitoring tool for microbial inoculants.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Mechanism Across Scales: A Holistic Modeling Framework Integrating Laboratory and Field Studies for Microbial Ecology

Over the last century, leaps in technology for imaging, sampling, detection, high-throughput sequencing, and -omics analyses have revolutionized microbial ecology to enable rapid acquisition of extensive datasets for microbial communities across the ever-increasing temporal and spatial scales. The present challenge is capitalizing on our enhanced abilities of observation and integrating diverse data types from different scales, resolutions, and disciplines to reach a causal and mechanistic understanding of how microbial communities transform and respond to perturbations in the environment. This type of causal and mechanistic understanding will make predictions of microbial community behavior more robust and actionable in addressing microbially mediated global problems. To discern drivers of microbial community assembly and function, we recognize the need for a conceptual, quantitative framework that connects measurements of genomic potential, the environment, and ecological and physical forces to rates of microbial growth at specific locations. We describe the Framework for Integrated, Conceptual, and Systematic Microbial Ecology (FICSME), an experimental design framework for conducting process-focused microbial ecology studies that incorporates biological, chemical, and physical drivers of a microbial system into a conceptual model. Through iterative cycles that advance our understanding of the coupling across scales and processes, we can reliably predict how perturbations to microbial systems impact ecosystem-scale processes or vice versa. We describe an approach and potential applications for using the FICSME to elucidate the mechanisms of globally important ecological and physical processes, toward attaining the goal of predicting the structure and function of microbial communities in chemically complex natural environments.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1998

Critical Slowing Down in Time-to-Extinction: An Example of Critical Phenomena in Ecology

We study a model for two competing species that explicitly accounts for effects due to discreteness, stochasticity and spatial extension of populations. The two species are equally preferred by the environment and do better when surrounded by others of the same species. We observe that the final outcome depends on the initial densities (uniformly distributed in space) of the two species. The observed phase transition is a continuous one and key macroscopic quantities like the correlation length of clusters and the time-to-extinction diverge at a critical point. Away from the critical point, the dynamics can be described by a mean-field approximation. Close to the critical point, however, there is a crossover to power-law behavior because of the gross mismatch between the largest and smallest scales in the system. We have developed a theory based on surface effects, which is in good agreement with the observed behavior. The course-grained reaction-diffusion system obtained from the mean-field dynamics agrees well with the particle system.

Gandhi, Amar↗
NASA NTRS1982

Controlled Ecological Life Support System: Research and Development Guidelines

Results of a workshop designed to provide a base for initiating a program of research and development of controlled ecological life support systems (CELSS) are summarized. Included are an evaluation of a ground based manned demonstration as a milestone in CELSS development, and a discussion of development requirements for a successful ground based CELSS demonstration. Research recommendations are presented concerning the following topics: nutrition and food processing, food production, waste processing, systems engineering and modelling, and ecology-systems safety.

Mason, R. M.↗
DOE OSTI2022

Remote sensing from unoccupied aerial systems: Opportunities to enhance Arctic plant ecology in a changing climate

The Arctic is warming at a faster rate than any other biome on Earth, resulting in widespread changes in vegetation composition, structure, and function that have important feedbacks to the global climate system. The heterogeneous nature of arctic landscapes creates challenges for monitoring and improving understanding of these ecosystems, as current efforts typically rely on ground, airborne, or satellite-based observations that are limited in space, time, or pixel resolution. The use of remote sensing instruments on small Unoccupied Aerial Systems (UASs) has emerged as an important tool to bridge the gap between detailed, but spatially limited ground-level measurements, and lower resolution, but spatially extensive high-altitude airborne and satellite observations. UASs allow researchers to view, describe and quantify vegetation dynamics at fine spatial scales (1-10 cm) over areas much larger than typical field plots. UASs can be deployed with a high degree of temporal flexibility, enabling observation across diurnal, seasonal, and annual timescales. In this work, we review how established and emerging UAS remote sensing technologies can enhance arctic plant ecological research by quantifying fine-scale vegetation patterns and processes, and by enhancing the ability to link ground-based measurements with broader-scale information obtained from airborne and satellite platforms. Synthesis: Improved ecological understanding and model representation of arctic vegetation is needed to forecast the fate of the Arctic in a rapidly changing climate. Observations from UASs provide an approach to address this need, however, the use of this technology in the Arctic currently remains limited. Here we share recommendations to better enable and encourage the use of UASs to improve the description, scaling, and model representation of arctic vegetation.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Predicting spring green-up across diverse North American grasslands

Vegetation phenology influences many ecosystem and climate processes, such as carbon uptake and energy and water cycles. Thus, understanding drivers of vegetation phenology is crucial for predicting current and future impacts of climate change on ecological systems. Existing models can accurately predict the date of spring green-up in temperate forests but tend to perform poorly in grassland systems. We hypothesize this is because most do not incorporate water availability, a primary limiting factor for grassland plants. In this study, we used long-term datasets of digital imagery from the PhenoCam Network of 43 diverse North American grassland sites (195 site-years) to test existing spring phenology models, as well as develop several new models that incorporate precipitation or soil moisture (53 models). As a result, most of the new models performed substantially better, with the best model requiring sufficient accumulated precipitation followed by warm temperatures to trigger spring onset (root mean square error, RMSE, between predicted and observed dates = 16.0 days). Importantly, the best model performed well across all grassland types using a single set of parameters, from temperate to arid grasslands. Since plants are adapted to their local climates, model performance was further improved when parameters were independently optimized for four separate climate regions (RMSE = 10.4 days). Therefore, both sufficient precipitation and temperature are required for grassland green-up, but optimal thresholds vary by region. Running the top model with projected climate data (representative concentration pathway 8.5) suggests that, depending on the climate region, spring onset will occur up to 12 days earlier within 100 years in temperature-limited sites, but the trend is unclear for precipitation-limited sites (3.5 ± 8.0 days later). This new phenology model improves our ability to understand and predict grassland dynamics, with implications for both current and future ecosystem processes related to carbon and water cycling.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

GriddingMachine, a database and software for Earth system modeling at global and regional scales

Land and Earth system modeling is moving towards more explicit biophysical representations, requiring increasing variety of datasets for initialization and benchmarking. However, researchers often have difficulties in identifying and integrating non-standardized datasets from various sources. We aim towards a standardized database and one-stop distribution method of global datasets. Here, we present the GriddingMachine as (1) a database of global-scale datasets commonly used to parameterize or benchmark the models, from plant traits to vegetation indices and geophysical information and (2) a cross-platform open source software to download and request a subset of datasets with only a few lines of code. The GriddingMachine datasets can be accessed either manually through traditional HTTP, or automatically using modern programming languages including Julia, Matlab, Octave, Python, and R. The GriddingMachine collections can be used for any land and Earth modeling framework and ecological research at the regional and global scales, and the number of datasets will continue to grow to meet the increasing needs of research communities.

58 GEOSCIENCES↗
DOE OSTI2025

A chromosome-level genome assembly of the varied leaved jewelflower, Streptanthus diversifolius, reveals a recent whole genome duplication

Abstract The Streptanthoid complex, a clade of primarily Streptanthus and Caulanthus species in the Thelypodieae (Brassicaceae) is an emerging model system for ecological and evolutionary studies. This complex spans the full range of the California Floristic Province including desert, foothill, and mountain environments. The ability of these related species to radiate into dramatically different environments makes them a desirable study subject for exploring how plant species expand their ranges and adapt to new environments over time. Ecological and evolutionary studies for this complex have revealed fascinating variation in serpentine soil adaptation, defense compounds, germination, flowering, and life history strategies. Until now a lack of publicly available genome assemblies has hindered the ability to relate these phenotypic observations to their underlying genetic and molecular mechanisms. To help remedy this situation, we present here a chromosome-level genome assembly and annotation of Streptanthus diversifolius, a member of the Streptanthoid Complex, developed using Illumina, Hi-C, and HiFi sequencing technologies. Construction of this assembly also provides further evidence to support the previously reported recent whole genome duplication unique to the Thelypodieae. This whole genome duplication may have provided individuals in the Streptanthoid Complex the genetic arsenal to rapidly radiate throughout the California Floristic Province and to occupy commonly inhospitable environments including serpentine soils.

Genetics & Heredity↗
DOE OSTI2020

Population genomics and history of speciation reveal fishery management gaps in two related redfish species ( Sebastes mentella and Sebastes fasciatus )

Abstract Understanding the processes shaping population structure and reproductive isolation of marine organisms can improve their management and conservation. Using genomic markers combined with estimation of individual ancestries, assignment tests, spatial ecology, and demographic modeling, we (i) characterized the contemporary population structure, (ii) assessed the influence of space, fishing depth, and sampling years on contemporary distribution, and (iii) reconstructed the speciation history of two cryptic redfish species, Sebastes mentella and S. fasciatus . We genotyped 860 individuals in the Northwest Atlantic Ocean using 24,603 filtered single nucleotide polymorphisms (SNPs). Our results confirmed the clear genetic distinctiveness of the two species and identified three ecotypes within S. mentella and five populations in S. fasciatus . Multivariate analyses highlighted the influence of spatial distribution and depth on the overall genomic variation, while demographic modeling revealed that secondary contact models best explained inter‐ and intragenomic divergence. These species, ecotypes, and populations can be considered as a rare and wide continuum of genomic divergence in the marine environment. This acquired knowledge pertaining to the evolutionary processes driving population divergence and reproductive isolation will help optimizing the assessment of demographic units and possibly to refine fishery management units.

Benestan, Laura M.↗
DOE OSTI2024

Building Stock Models for Embodied Carbon Emissions—A Review of a Nascent Field

Building stock modeling emerges as a critical tool in the strategic reduction of embodied carbon emissions, which is pivotal in reshaping the evolving construction sector. This review provides an overall view of modern methodologies in building stock modeling, homing in on the nuances of embodied carbon analysis in construction. Examining 23 seminal papers, our study delineates two primary modeling paradigms—top-down and bottom-up—each further compartmentalized into five innovative methods. This study points out the challenges of data scarcity and computational demands, advocating for methodological advancements that promise to refine the precision of building stock models. A groundbreaking trend in recent research is the incorporation of machine learning algorithms, which have demonstrated remarkable capacity, improving stock classification accuracy by 25% and urban material quantification by 40%. Furthermore, the application of remote sensing has revolutionized data acquisition, enhancing data richness by a factor of five. This review offers a critical examination of current practices and charts a course toward an environmentally prudent future. It underscores the transformative impact of building stock modeling in driving ecological stewardship in the construction industry, positioning it as a cornerstone in the quest for sustainability and its significant contribution toward the grand vision of an eco-efficient built environment.

Hu, Ming (ORCID:0000000325831161)↗
NASA NTRS1993

Microstrip Ring Resonator for Soil Moisture Measurements

Accurate determination of spatial soil moisture distribution and monitoring its temporal variation have a significant impact on the outcomes of hydrologic, ecologic, and climatic models. Development of a successful remote sensing instrument for soil moisture relies on the accurate knowledge of the soil dielectric constant (epsilon(sub soil)) to its moisture content. Two existing methods for measurement of dielectric constant of soil at low and high frequencies are, respectively, the time domain reflectometry and the reflection coefficient measurement using an open-ended coaxial probe. The major shortcoming of these methods is the lack of accurate determination of the imaginary part of epsilon(sub soil). In this paper a microstrip ring resonator is proposed for the accurate measurement of soil dielectric constant. In this technique the microstrip ring resonator is placed in contact with soil medium and the real and imaginary parts of epsilon(sub soil) are determined from the changes in the resonant frequency and the quality factor of the resonator respectively. The solution of the electromagnetic problem is obtained using a hybrid approach based on the method of moments solution of the quasi-static formulation in conjunction with experimental data obtained from reference dielectric samples. Also a simple inversion algorithm for epsilon(sub soil) = epsilon'(sub r) + j(epsilon"(sub r)) based on regression analysis is obtained. It is shown that the wide dynamic range of the measured quantities provides excellent accuracy in the dielectric constant measurement. A prototype microstrip ring resonator at L-band is designed and measurements of soil with different moisture contents are presented and compared with other approaches.

Sarabandi, Kamal↗
NASA NTRS2005

Space-based Remote Sensing: A Tool for Studying Bird Migration Across Multiple Scales

The study of bird migration on a global scale is one of the compelling and challenging problems of modern biology with major implications for human health and conservation biology. Migration and conservation efforts cross national boundaries and are subject to numerous international agreements and treaties. Space based technology offers new opportunities to shed understanding on the distribution and migration of organisms on the planet and their sensitivity to human disturbances and environmental changes. Our working hypothesis is that individual organism biophysical models of energy and water balance, driven by satellite measurements of spatio-temporal gradients in climate and habitat, will help us to explain the variability in avian species richness and distribution. Further, these models provide an ecological forecasting tool for science and application users to visualize the possible consequences of loss of wetlands, flooding, or other natural disasters such as hurricanes on avian biodiversity and bird migration.

Smith, James A.↗
NASA NTRS2011

Potential Scientific Output from the Visible Channels of EPIC Spectroradiometer as Part of the DSCOVR L1 Mission

In addition to 4 UV channels, the EPIC spectroradiometer will provide measurements at 6 visible (and near IR) channels (443,551,680,687.75, 764 and 779.9 nm) at roughly 10 km spatial resolution. The scattering angles are near backscattering and vary between 165 and 176 degree. Two pairs {680 and 687.75 nm} and {764 and 779.9 nm} represent 02 B- and A-bands (and their references) channels; they will be used for cloud height measurements over land and ocean. The B-band channel will contribute to the more absorbing A-band measurements over bright vegetation. A pair {680 and 779.9 nm} will be used for retrieving vegetation properties. Due to the special EPIC geometry, the illuminated part of the leaves will be always observed. As a result, in additional to the traditional Leaf Area Index (LAI), these observations for the first time will provide the sunlit fraction of LAI. Since the sunlit and shaded leaves exhibit different photosynthetic response to incident radiation, these measurements will help to improve global ecological and biogeochemistry models. Finally, a pair {443 and 551 nm} will be used for atmospheric correction. As a by-product of the atmospheric correction algorithm, we also expect to get aerosol optical thickness (AOT) and surface bidirectional reflection function (BRF). The presentation will briefly overview the proposed science algorithms.

Marshak, Alexander↗
NASA NTRS2021

Southern Bhutan Ecological Forecasting III: Utilizing NASA Earth Observations to Model Land Cover Change and Elephant Wildlife Corridors in Southern Bhutan

Habitat loss of the endangered Asian elephants (Elephas maximus) accompanied by rapid urbanization has contributed to the rising human-elephant conflict (HEC) crisis in southern Bhutan. This poses a serious threat to the survival of Asian elephants, a keystone wildlife species essential for maintaining Bhutan’s forest ecosystems and rich biodiversity. With expanding urban areas, HECs present challenges to conservation efforts in the region. The team partnered with the Bhutan Foundation, the Bhutan Tiger Center, and Bhutan Ecological Society to help mitigate this issue using remote sensing technology and NASA Earth observations. The team refined Land Use and Land Cover (LULC) maps for 2010–2019 generated in previous terms and elephant corridor maps to include information on human settlements using Landsat 5 Thematic Mapper (TM) and Landsat 8 Operational Land Imager (OLI) data. We generated LULC change maps and forecasted the LULC to 2030 using TerrSet Land Change Modeler, providing insights into future elephant habitat suitability in southern Bhutan. The results indicated that built-up areas increased approximately 688.9% from 2010 to 2019 and the forecasted 2030 LULC also predicted an increase in built-up areas compared to 2019. Suitable corridors in Gelephu intersect cultivated and built-up areas, indicating close proximity of elephants to humans and a need to research alternative corridor strategies. The end products from this project will aid partner organizations in decision-making processes in urban planning and future conservation strategies that include the refined placement of biological corridors to aid elephant movement and reduce the risk of HECs.

Thinley Yidzin Wangden↗
NASA NTRSDate not supplied

NASA’s NextGen Remote Sensing Instruments Have Arrived: Data Products For Studying Disease Vectors

Remote sensing can be used to measure, evaluate or estimate both the environment (state functions) and interfaces (processfunctions) defining vector habitats. The products of remote sensing can be integrated directly into the epidemiological equationsto significantly enhance our understanding of disease vector’s life cycles and habitats. The next generation of NASA’s remotesensing instruments which have become recently operational will provide a significant enhancement in our ability to studydisease vector’s life cycles and habitats. These instruments are on the International Space Station (ISS) and includeECOSTRESS, DESIS, and GEDI. ECOSTRESS is a 5 channel, thermal IR instrument with 70 m resolution and approximately1-5 day repeat cycle of day/night pairs. DESIS jointly developed by German Aerospace Center and Teledyne Brown Engineeringis a hyperspectral sensor system of 235 channels and 30 m resolution. DESIS data is only being acquired on demand. GEDI is ahigh-resolution laser ranger used for observing Earth’s forests and topography. NASA’s current ISS instrument configuration provides measurements of the critical environmental measures of environmentalstate functions important to vector & disease life cycles. Remote sensing data provide a spatial context and time series oflandscape scale process functions represented by land use mapping and measurements of ecological functions. Global publichealth is entering a new information age through the use of spatial models of disease vector/host ecologies driven by the use ofremotely sensed data to measure environmental and structural factors critical in determining disease vector habitats. In 2018, NASA initiated a new study for the Surface Biology and Geology (SBG) Designated Observable, identified in the 2018National Academies’ Decadal Survey entitled, “Thriving on Our Changing Planet: A Decadal Strategy for Earth Observationfrom Space.” (https://www.nap.edu/catalog/24938/thriving-on-our-changing-planet-a-decadal-strategy-for-earth) . The SBG isplanned to collect global remote sensing measurements using a hyperspectral spectrometer and multispectral thermal data. Thesedata sets will provide a significant enhancement in our ability to study disease vector’s life cycles and habitats globally. The 3sensors on the ISS provide precursor data to prepare the community for the application of future SBG data toward diseasestudies.

Disease Vectors↗
DOE OSTI2024

Reimagining Earth in the Earth System

Abstract Terrestrial, aquatic, and marine ecosystems regulate climate at local to global scales through exchanges of energy and matter with the atmosphere and assist with climate change mitigation through nature‐based climate solutions. Climate science is no longer a study of the physics of the atmosphere and oceans, but also the ecology of the biosphere. This is the promise of Earth system science: to transcend academic disciplines to enable study of the interacting physics, chemistry, and biology of the planet. However, long‐standing tension in protecting, restoring, and managing forest ecosystems to purposely improve climate evidences the difficulties of interdisciplinary science. For four centuries, forest management for climate betterment was argued, legislated, and ultimately dismissed, when nineteenth century atmospheric scientists narrowly defined climate science to the exclusion of ecology. Today's Earth system science, with its roots in global models of climate, unfolds in similar ways to the past. With Earth system models, geoscientists are again defining the ecology of the Earth system. Here we reframe Earth system science so that the biosphere and its ecology are equally integrated with the fluid Earth to enable Earth system prediction for planetary stewardship. Central to this is the need to overcome an intellectual heritage to the models that elevates geoscience and marginalizes ecology and local land knowledge. The call for kilometer‐scale atmospheric and ocean models, without concomitant scientific and computational investment in the land and biosphere, perpetuates the geophysical view of Earth and will not fully provide the comprehensive actionable information needed for a changing climate.

Meteorology & Atmospheric Sciences↗