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At least 163 records · Page 9

Theoretical and experimental studies of atmospheric structure and dynamics, using high altitude chemical release, Radio meteor, and meteorological rocket network and other data

Data collected by the Georgia Tech Radio Meteor Wind Facility during the fall and winter of 1975 are analyzed indicating a relationship between lower thermospheric circulation at mid latitudes and polar stratospheric dynamics. Techniques of measurement of mixing processes in the upper atmosphere and the interpretation of those measurements are described along with a diffusion simulation program based on the Global Reference Atmosphere program.

Edwards, H. D.↗

Atmospheric sounding with the Lidar In-Space Technology Experiment (LITE)

The Lidar In-Space Technology Experiment (LITE) is being developed by NASA Langley Research Center for a series of flights on the Space Shuttle. Using a three-wavelength Nd:YAG laser and a 1-meter-diameter telescope, the system will be used to study clouds, aerosols in the troposphere and stratosphere, density and temperature perturbations of the stratosphere, and characteristics of the planetary boundary layer. Data collected from the system will be used in studies of atmospheric dynamics, meteorology, climate, the radiation budget, biogeochemical processes, and the hydrologic cycle. Additionally, the data will be used to develop retrieval techniques optimized for a spaceborne configuration and to develop requirements for future operational spaceborne lidar systems.

Winker, D. M.↗

Harnessing the power of an X-ray laser for serial crystallography of membrane proteins crystallized in lipidic cubic phase

Serial femtosecond crystallography (SFX) with X-ray free-electron lasers (XFELs) has proven highly successful for structure determination of challenging membrane proteins crystallized in lipidic cubic phase; however, like most techniques, it has limitations. Here we attempt to address some of these limitations related to the use of a vacuum chamber and the need for attenuation of the XFEL beam, in order to further improve the efficiency of this method. Using an optimized SFX experimental setup in a helium atmosphere, the room-temperature structure of the adenosine A 2A receptor (A 2A AR) at 2.0 Å resolution is determined and compared with previous A 2A AR structures determined in vacuum and/or at cryogenic temperatures. Specifically, the capability of utilizing high XFEL beam transmissions is demonstrated, in conjunction with a high dynamic range detector, to collect high-resolution SFX data while reducing crystalline material consumption and shortening the collection time required for a complete dataset. The experimental setup presented herein can be applied to future SFX applications for protein nanocrystal samples to aid in structure-based discovery efforts of therapeutic targets that are difficult to crystallize.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Case Study of High-Throughput Drug Screening and Remote Data Collection for SARS-CoV-2 Main Protease by Using Serial Femtosecond X-ray Crystallography

Since early 2020, COVID-19 has grown to affect the lives of billions globally. A worldwide investigation has been ongoing for characterizing the virus and also for finding an effective drug and developing vaccines. As time has been of the essence, a crucial part of this research has been drug repurposing; therefore, confirmation of in silico drug screening studies have been carried out for this purpose. Here we demonstrated the possibility of screening a variety of drugs efficiently by leveraging a high data collection rate of 120 images/second with the new low-noise, high dynamic range ePix10k2M Pixel Array Detector installed at the Macromolecular Femtosecond Crystallography (MFX) instrument at the Linac Coherent Light Source (LCLS). The X-ray Free-Electron Laser (XFEL) is used for remote high-throughput data collection for drug repurposing of the main protease (Mpro) of SARS-CoV-2 at ambient temperature with mitigated X-ray radiation damage. We obtained multiple structures soaked with nine drug candidate molecules in two crystal forms. Although our drug binding attempts failed, we successfully established a high-throughput Serial Femtosecond X-ray crystallographic (SFX) data collection protocol.

60 APPLIED LIFE SCIENCES↗

Subterahertz collective dynamics of polar vortices

The collective dynamics of topological structures are of interest from both fundamental and applied perspectives. For example, studies of dynamical properties of magnetic vortices and skyrmions have not only deepened our understanding of many-body physics but also offered potential applications in data processing and storage. Topological structures constructed from electrical polarization, rather than electron spin, have recently been realized in ferroelectric superlattices, and these are promising for ultrafast electric-field control of topological orders. However, little is known about the dynamics underlying the functionality of such complex extended nanostructures. In this study, using terahertz-field excitation and femtosecond X-ray diffraction measurements, we observe ultrafast collective polarization dynamics that are unique to polar vortices, with orders-of-magnitude higher frequencies and smaller lateral size than those of experimentally realized magnetic vortices. A previously unseen tunable mode, hereafter referred to as a vortexon, emerges in the form of transient arrays of nanoscale circular patterns of atomic displacements, which reverse their vorticity on picosecond timescales. Its frequency is considerably reduced (softened) at a critical strain, indicating a condensation (freezing) of structural dynamics. We use first-principles-based atomistic calculations and phase-field modelling to reveal the microscopic atomic arrangements and corroborate the frequencies of the vortex modes. The discovery of subterahertz collective dynamics in polar vortices opens opportunities for electric-field-driven data processing in topological structures with ultrahigh speed and density.

36 MATERIALS SCIENCE↗

Machine learning prediction of glass transition temperature of conjugated polymers from chemical structure

Predicting the glass transition temperature (T g ) is of critical importance as it governs the thermomechanical performance of conjugated polymers (CPs). Here, we report a predictive modeling framework to predict T g of CPs through the integration of machine learning (ML), molecular dynamics (MD) simulations, and experiments. With 154 T g data collected, an ML model is developed by taking simplified “geometry” of six chemical building blocks as molecular features, where side-chain fraction, isolated rings, fused rings, and bridged rings features are identified as the dominant ones for T g . MD simulations further unravel the fundamental roles of those chemical building blocks in dynamical heterogeneity and local mobility of CPs at a molecular level. The developed ML model is demonstrated for its capability of predicting T g of several new high-performance solar cell materials to a good approximation. The established predictive framework facilitates the design and prediction of T g of complex CPs, paving the way for addressing device stability issues that have hampered the field from developing stable organic electronics.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Observing tectonic plate motions and deformations from satellite laser ranging

The scope of geodesy has been greatly affected by the advent of artificial near-earth satellites. The present paper provides a description of the results obtained from the reduction of data collected with the aid of satellite laser ranging. It is pointed out that dynamic reduction of satellite laser ranging (SLR) data provides very precise positions in three dimensions for the laser tracking network. The vertical components of the stations, through the tracking geometry provided by the global network and the accurate knowledge of orbital dynamics, are uniquely related to the center of mass of the earth. Attention is given to the observations, the methodologies for reducing satellite observations to estimate station positions, Lageos-observed tectonic plate motions, an improved temporal resolution of SLR plate motions, and the SLR vertical datum.

Christodoulidis, D. C.↗

Data collection procedures for the Software Engineering Laboratory (SEL) database

This document is a guidebook to collecting software engineering data on software development and maintenance efforts, as practiced in the Software Engineering Laboratory (SEL). It supersedes the document entitled Data Collection Procedures for the Rehosted SEL Database, number SEL-87-008 in the SEL series, which was published in October 1987. It presents procedures to be followed on software development and maintenance projects in the Flight Dynamics Division (FDD) of Goddard Space Flight Center (GSFC) for collecting data in support of SEL software engineering research activities. These procedures include detailed instructions for the completion and submission of SEL data collection forms.

Heller, Gerard↗

Vector-Ordering Filter Procedure for Data Reduction

The vector-ordering filter (VOF) technique involves a procedure for sampling a large population of data vectors to select a subset of data vectors that fully characterize the state space of the large population. The VOF technique enables a large reduction of the volume of data that must be handled in the automated monitoring system and method discussed in the two immediately preceding articles. In so doing, the VOF technique enables the development of data-driven mathematical models of a monitored asset from sets of data that would otherwise exceed the memory capacities of conventional engineering computers. Data-driven mathematical models have been shown to offer high fidelity for purposes of control and monitoring of assets. In practice, a collection of asset-operating observations is acquired with the intention that the collection contain observations characteristic of the full dynamic range of operation of the asset. Often, such a collection contains an extremely large number of observations, many of which are redundant. The VOF technique fills the need for a means to extract, from the original collection of observational data, a reduced data matrix that excludes redundant data while maintaining the full statistical character and dynamic range of the original data. The reduced data matrix can then be used as the input data for development of a mathematical model of the monitored asset, or as training data for a neural-network substitute for an explicit mathematical model of the asset. Alternatively, the reduced data matrix can, itself, be used directly as a mathematical model of the monitored asset, as is commonly done in multivariate state-estimation techniques. The original data are collected from the asset over a range of operating states and are put in matrix form. Each column vector in the original data matrix represents the signal values acquired at a particular operational state of the asset. Thus, the number of columns of the original data matrix equals the number of observed states and the number of rows in this matrix equals the number of signals acquired at each observation. In the VOF technique, one extracts the reduced data matrix from the original data matrix through the selection of a representative subset of the column (state) vectors.

Bickford, Randall L.↗

Metabolomic, photoprotective, and photosynthetic acclimatory responses to post‐flowering drought in sorghum

Abstract Climate change is globally affecting rainfall patterns, necessitating the improvement of drought tolerance in crops. Sorghum bicolor is a relatively drought‐tolerant cereal. Functional stay‐green sorghum genotypes can maintain green leaf area and efficient grain filling during terminal post‐flowering water deprivation, a period of ~10 weeks. To obtain molecular insights into these characteristics, two drought‐tolerant genotypes, BTx642 and RTx430, were grown in replicated control and terminal post‐flowering drought field plots in California's Central Valley. Photosynthetic, photoprotective, and water dynamics traits were quantified and correlated with metabolomic data collected from leaves, stems, and roots at multiple timepoints during control and drought conditions. Physiological and metabolomic data were then compared to longitudinal RNA sequencing data collected from these two genotypes. The unique metabolic and transcriptomic response to post‐flowering drought in sorghum supports a role for the metabolite galactinol in controlling photosynthetic activity through regulating stomatal closure in post‐flowering drought. Additionally, in the functional stay‐green genotype BTx642, photoprotective responses were specifically induced in post‐flowering drought, supporting a role for photoprotection in the molecular response associated with the functional stay‐green trait. From these insights, new pathways are identified that can be targeted to maximize yields under growth conditions with limited water.

54 ENVIRONMENTAL SCIENCES↗

Aboveground biomass density models for NASA’s Global Ecosystem Dynamics Investigation (GEDI) lidar mission

NASA's Global Ecosystem Dynamics Investigation (GEDI) is collecting spaceborne full waveform lidar data with a primary science goal of producing accurate estimates of forest aboveground biomass density (AGBD). This paper presents the development of the models used to create GEDI's footprint-level (~25 m) AGBD (GEDI04_A) product, including a description of the datasets used and the procedure for final model selection. The data used to fit our models are from a compilation of globally distributed spatially and temporally coincident field and airborne lidar datasets, whereby we simulated GEDI-like waveforms from airborne lidar to build a calibration database. We used this database to expand the geographic extent of past waveform lidar studies, and divided the globe into four broad strata by Plant Functional Type (PFT) and six geographic regions. GEDI's waveform-to-biomass models take the form of parametric Ordinary Least Squares (OLS) models with simulated Relative Height (RH) metrics as predictor variables. From an exhaustive set of candidate models, we selected the best input predictor variables, and data transformations for each geographic stratum in the GEDI domain to produce a set of comprehensive predictive footprint-level models. We found that model selection frequently favored combinations of RH metrics at the 98th, 90th, 50th, and 10th height above ground-level percentiles (RH98, RH90, RH50, and RH10, respectively), but that inclusion of lower RH metrics (e.g. RH10) did not markedly improve model performance. Second, forced inclusion of RH98 in all models was important and did not degrade model performance, and the best performing models were parsimonious, typically having only 1-3 predictors. Third, stratification by geographic domain (PFT, geographic region) improved model performance in comparison to global models without stratification. Fourth, for the vast majority of strata, the best performing models were fit using square root transformation of field AGBD and/or height metrics. There was considerable variability in model performance across geographic strata, and areas with sparse training data and/or high AGBD values had the poorest performance. These models are used to produce global predictions of AGBD, but will be improved in the future as more and better training data become available.

54 ENVIRONMENTAL SCIENCES↗

Structured Neural Network Modeling for Developing Digital Twins Models of Hydropower Generation Units

Dynamic modeling is a key part in the development of digital twin (DT) for dynamic systems. This is true for hydropower systems, where whole system modeling including penstock, turbine and generators, etc is important in realizing actuate modeling for the real systems. On the other hand, in response to the large variations of the power demand due to increased penetration of renewables such as wind and solar, hydropower systems are now required to operate in a large power generation range. This situation triggers the nonlinear characteristics of the generation unit with respect to its models. As such, it is imperative to use data driven modeling such as neural networks to learn the nonlinear dynamics of the hydropower generation unit. To achieve this objective, this study constructs a modeling and learning algorithm integrated with multiple structured neural network models for the modeling of turbine shaft speed, penstock pressure, and generator power output based on the generator power control setpoint, field current, and field voltage. In addition, the study uses the hydropower data from Tacoma Public Utilities to train and validate the proposed neural network algorithm. The results have shown that this structured neural network modeling approach can learn the system dynamics effectively by using the real-time data collected from the hydropower system with the desired modeling results.

Wang, Hong↗

Modeling Low Intensity Fires: Lessons Learned from 2012 RxCADRE

Coupled fire-atmosphere models are increasingly being used to study low-intensity fires, such as those that are used in prescribed fire applications. Thus, the need arises to evaluate these models for their ability to accurately represent fire spread in marginal burning conditions. In this study, wind and fuel data collected during the Prescribed Fire Combustion and Atmospheric Dynamics Research Experiments (RxCADRE) fire campaign were used to generate initial and boundary conditions for coupled fire-atmosphere simulations. We present a novel method to obtain fuels representation at the model grid scale using a combination of imagery, machine learning, and field sampling. Several methods to generate wind input conditions for the model from eight different anemometer measurements are explored. We find a strong sensitivity of fire outcomes to wind inputs. This result highlights the critical need to include variable wind fields as inputs in modeling marginal fire conditions. This work highlights the complexities of comparing physics-based model results against observations, which are more acute in marginal burning conditions, where stronger sensitivities to local variability in wind and fuels drive fire outcomes.

54 ENVIRONMENTAL SCIENCES↗

Assessment of model estimates of land-atmosphere CO 2 exchange across Northern Eurasia

A warming climate is altering land-atmosphere exchanges of carbon, with a potential for increased vegetation productivity as well as the mobilization of permafrost soil carbon stores. Here we investigate land-atmosphere carbon dioxide (CO 2 ) cycling through analysis of net ecosystem productivity (NEP) and its component fluxes of gross primary productivity (GPP) and ecosystem respiration (ER) and soil carbon residence time, simulated by a set of land surface models (LSMs) over a region spanning the drainage basin of Northern Eurasia. The retrospective simulations cover the period 1960–2009 at 0.5° resolution, which is a scale common among many global carbon and climate model simulations. Model performance benchmarks were drawn from comparisons against both observed CO 2 fluxes derived from site-based eddy covariance measurements as well as regional-scale GPP estimates based on satellite remote-sensing data. The site-based comparisons depict a tendency for overestimates in GPP and ER for several of the models, particularly at the two sites to the south. For several models the spatial pattern in GPP explains less than half the variance in the MODIS MOD17 GPP product. Across the models NEP increases by as little as 0.01 to as much as 0.79 g C m⁻² yr⁻², equivalent to 3 to 340 % of the respective model means, over the analysis period. For the multimodel average the increase is 135 % of the mean from the first to last 10 years of record (1960–1969 vs. 2000–2009), with a weakening CO 2 sink over the latter decades. Vegetation net primary productivity increased by 8 to 30 % from the first to last 10 years, contributing to soil carbon storage gains. The range in regional mean NEP among the group is twice the multimodel mean, indicative of the uncertainty in CO 2 sink strength. The models simulate that inputs to the soil carbon pool exceeded losses, resulting in a net soil carbon gain amid a decrease in residence time. Our analysis points to improvements in model elements controlling vegetation productivity and soil respiration as being needed for reducing uncertainty in land-atmosphere CO 2 exchange. These advances will require collection of new field data on vegetation and soil dynamics, the development of benchmarking data sets from measurements and remote-sensing observations, and investments in future model development and intercomparison studies.

54 ENVIRONMENTAL SCIENCES↗

Analysis of aerodynamic coefficients using gradient data: Spanwise turbulence effects on airplane response

The influence of spanwise turbulence on airplane dynamic behavior is determined. Calculations are based on data collected from test flights with the NASA B-57 research aircraft. The approach is to first compute aerodynamic forces and moments due to a spanwise distribution of angle of attack and airspeed. Secondly, these quantities are incorporated into the equations of motion. Simulation of flights done with the effects of spanwise turbulence included are compared to simulations without any spanwise turbulence. The findings of the study are that the moments developed by turbulence along the span are significant and that more realistic flight simulation can be achieved by including the spanwise turbulence terms.

Ringnes, E. A.↗

Solar wind control of the Geomagnetic Mass Spectrometer

Evidence from Dynamics Explorer retarding-ion mass-spectrometer data collected between 1981 and 1983 for the mass dispersion of ionospheric plasma in the polar cap, known as the Geomagnetic Mass Spectrometer, is discussed, and implications of this new source of ionospheric ions for the magnetosphere are considered. A localized source of energization of ionspheric H(+), He(+), O(+) and N(+) ions in the polar cusp yields a source of upswelling plasma that is transported into the magnetosphere, and equal heating of the ion species results in field-aligned flow velocities which are inversely proportional to the square root of the ion mass. The present phenomenon is produced by the resulting velocity filter effect of solar-driven ExB ion convection. The influence of solar wind conditions on the outflow via the polar cap ExB convection pattern is also discussed.

Waite, J. H., Jr.↗

Chemistry of Diogenites and Evolution of their Parent Asteroid

Diogenites are orthopyroxenite meteorites [1]. Most are breccias, but remnant textures indicate they were originally coarse-grained rocks, with grain sizes of order of cm. Their petrography, and major and trace element chemistry support an origin as crustal cumulates from a differentiated asteroid. Diogenites are genetically related to the basaltic and cumulate-gabbro eucrites, and the polymict breccias known as howardites, collectively, the HED suite. Spectroscopic observations, orbit data and dynamical arguments strongly support the hypothesis that asteroid 4 Vesta is the parent object for HED meteorites [2]. Here we discuss our new trace element data for a suite of diogenites and integrate these into the body of literature data. We use the combined data set to discuss the petrologic evolution of diogenites and 4 Vesta.

Mittlefehldt, D.W.↗