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At least 163 records · Page 9

A fast two-stage algorithm for non-negative matrix factorization in smoothly varying data

This article reports the study of algorithms for non-negative matrix factorization (NMF) in various applications involving smoothly varying data such as time or temperature series diffraction data on a dense grid of points. Utilizing the continual nature of the data, a fast two-stage algorithm is developed for highly efficient and accurate NMF. In the first stage, an alternating non-negative least-squares framework is used in combination with the active set method with a warm-start strategy for the solution of subproblems. In the second stage, an interior point method is adopted to accelerate the local convergence. The convergence of the proposed algorithm is proved. The new algorithm is compared with some existing algorithms in benchmark tests using both real-world data and synthetic data. Furthermore, the results demonstrate the advantage of the algorithm in finding high-precision solutions.

interior point method↗

Transverse energy–energy correlations of jets in the electron–proton deep inelastic scattering at HERA

We study the event shape variables, transverse energy–energy correlation TEEC (cosφ) and its asymmetry ATEEC (cosφ) in deep inelastic scattering (DIS) at the electron–proton collider HERA, where φ is the angle between two jets defined using a transverse-momentum (k T ) jet algorithm. At HERA, jets are defined in the Breit frame, and the leading nontrivial transverse energy–energy correlations arise from the 3-jet configurations. With the help of the NLOJET++, these functions are calculated in the leading order (LO) and the next-to-leading order (NLO) approximations in QCD at the electron–proton center-of-mass energy $\sqrt{s}$ = 314 GeV. We restrict the angular region to -0.8 ≤ cosφ ≤ 0.8, as the forward- and backward-angular regions require resummed logarithmic corrections, which we have neglected in this work. Following experimental jet-analysis at HERA, we restrict the DIS-variables x, y = Q 2 /(xs), where Q 2 = -q 2 is the negative of the momentum transfer squared q 2 , to 0 ≤ x ≤ 1, 0.2 ≤ y ≤ 0.6, and the pseudo-rapidity variable in the laboratory frame (η lab ) to the range -1 ≤ η lab ≤ 2.5. The TEEC and ATEEC functions are worked out for two ranges in Q 2 , defined by 5.5GeV 2 ≤ Q 2 ≤ 80GeV 2 , called the low-Q 2 -range, and 150GeV 2 ≤ Q 2 ≤ 1000GeV 2 , called the high-Q 2 -range. We show the sensitivity of these functions on the parton distribution functions (PDFs), the factorization (μ F ) and renormalization (μ R ) scales, and on α s (M$^2_Z$). Of these the correlations are stable against varying the scale μ F and the PDFs, but they do depend on μ R . For the choice of the scale μ R =$\sqrt{\langle ET \rangle^2+Q^2}$, advocated in earlier jet analysis at HERA, the shape variables TEEC and ATEEC are found perturbatively robust. These studies are useful in the analysis of the HERA data, including the determination of α s (M$^2_Z$) from the shape variables.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Host phylogeny matters: Examining sources of variation in infection risk by blood parasites across a tropical montane bird community in India

Abstract Background Identifying patterns and drivers of infection risk among host communities is crucial to elucidate disease dynamics and predict infectious disease risk in wildlife populations. Blood parasites of the genera Plasmodium and Haemoproteus are a diverse group of vector-borne protozoan parasites that affect bird populations globally. Despite their widespread distribution and exceptional diversity, factors underlying haemosporidian infection risk in wild bird communities remain poorly understood. While some studies have examined variation in avian haemosporidian risk, researchers have primarily focused on host ecological traits without considering host phylogenetic relationships. In this study, we employ a phylogenetically informed approach to examine the association between host ecological traits and haemosporidian infection risk in endemic bird communities in the Western Ghats Sky Islands. Methods We used parasite sequence data based on partial mitochondrial cytochrome b gene, that was amplified from genomic DNA extracted from 1177 birds (28 species) across the Western Ghats to assess infection of birds with haemosporidian parasites. We employed a Bayesian phylogenetic mixed effect modelling approach to test whether haemosporidian infection risk was affected by seven species-specific and four individual-level ecological predictors. We also examined the effect of host phylogenetic relationships on the observed patterns of variation in haemosporidian infection risk by estimating phylogenetic signal. Results Our study shows that host ecological traits and host phylogeny differentially influence infection risk by Plasmodium (generalist parasite) and Haemoproteus (specialist parasite). For Plasmodium , we found that sociality, sexual dimorphism and foraging strata were important ecological predictors. For Haemoproteus , patterns of infection risk among host species were associated with sociality, species elevation and individual body condition. Interestingly, variance in infection risk explained by host phylogeny was higher for Haemoproteus parasites compared to Plasmodium . Conclusions Our study highlights that while host ecological traits promoting parasite exposure and host susceptibility are important determinants of infection risk, host phylogeny also contributes substantially to predicting patterns of haemosporidian infection risk in multi-host communities. Importantly, infection risk is driven by joint contributions of host ecology and host phylogeny and studying these effects together could increase our ability to better understand the drivers of infection risk and predict future disease threats. Graphical abstract

59 BASIC BIOLOGICAL SCIENCES↗

Effects of additively manufactured surface roughness on small diameter plenums with multiple side discharges for high temperature gas turbine blade cooling applications

Combined heat and power (CHP) applications have significant environmental and economic benefits that are consistent with the goals of the U.S. Department of Energy (DOE). One area that is currently being studied includes the potential benefits of CHP turbine operation at higher turbine inlet temperatures. Internal cooling concepts enabled by additive manufacturing (AM) are of primary interest. Here, the effectiveness of internal cooling is hindered by many factors such as velocity distribution of the cooling air to the hot surface considering impingement cooling. To simulate cooling air exiting from a series of orifices for internal cooling in an airfoil, a straight smooth wall tubing with multiple side discharging orifices is used and compared to additively manufactured tubing (Ti6Al4V Grade 23) with orifice size and spacing as well as inner and outer diameters identical to the smooth wall tubing. Similar to flow discharging form perforated pipes, the flow discharged from individual orifices along the tubes in this study is found to be nonuniformly distributed, and the horizontal (axial direction) momentum can be observed from the experimental data. Discharge velocities have been measured with two-dimensional (2D) particle imaging velocimetry (PIV) and single element hot wire anemometry. Numerical analysis has also been conducted to predict the velocity distributions along the orifices in the smooth wall and additive manufacturing (AM) tubing, which are inherited with surface roughness. Numerical and measured results in this study are compared, presented, and discussed.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Stress-Drop and Source Scaling of the 2019 Ridgecrest, California, Earthquake Sequence

Stress drop, while difficult to measure reliably and at scale, is a key source parameter for understanding the earthquake rupture process and its relationship to strong ground motion. Here, we use a P-wave spectral decomposition approach, designed for large and densely sampled datasets, to measure earthquake stress drop in the region surrounding the 2019 Ridgecrest, California, earthquake sequence. With more than 11,000 measurements of earthquake stress drop in the 20-yr time period from 2000 through 2019, this dataset provides an opportunity to understand how coseismic stress changes and how other geophysical factors relate to the distribution of stress drop and its evolution in space and time. We observe a mild but persistent deviation from self-similar scaling, with larger events having systematically higher stress drops, though this trend depends on the assumption of an omega-square source spectral model. Earthquake stress drop increases with hypocentral depth in this study region, and the Ridgecrest aftershocks tend to have higher stress drops than the pre-event seismicity. This is in part due to their deeper hypocenters. Coherent spatial patterns of stress drop in the aftershock sequence correlate with the slip distribution of the M 7.1 mainshock, whose northwest rupture tip terminated in a long-lived zone of enervated stress drop. Although physical interpretation of these results is complicated by the trade-offs between the timing, depth, and location of these earthquakes, the observations provide new insight into the physics of the earthquake source in an area of renewed seismic activity in southern California.

58 GEOSCIENCES↗

Progress on Computational Modeling of Water-Based NSTF (FY2021)

This report documents the FY21 progress and achievements made in the computational analyses of the water-based NSTF. Both system-level and high-fidelity Computational Fluid Dynamics (CFD) analyses were performed to gain a complete understanding of the complex flow and heat transfer phenomena in natural convection systems. The progress on the waterbased NSTF experimental testing is summarized in a companion report (ANL-ART-230). As a continuation of progress from previous years, in FY21 the RELAP5 model of the NSTF was first updated to include a representative heated cavity that incorporated convection and conduction means of heat transfer. Two different cavity models were developed, one that models the radiation heat exchange among all surfaces in one enclosure (Cavity Model 1), and another that employs multiple radiation enclosures with each considering the surfaces at one axial level (Cavity Model 2). This updated RELAP5 deck was benchmarked with single-phase test data to tune form loss coefficients of the elbows and tees, along with heat transfer coefficients within the cavity and off the external insulation panels. This tuned model was then found to accurately predict fluid temperatures within 2.5% and both system and riser flow rates within 6% during single-phase, steady-state simulations. For transient simulations, there is a slight over prediction of the flow rate, fluid temperatures, and heater temperatures during the heat-up period, which indicate that the transient heat loss may be underestimated. Following, the capabilities of RELAP5-3D were examined, which feature a conduction enclosure model that is not present in the current version of RELAP5-MOD3.3 used for all previous NSTF simulations. As an initial comparison of the two codes, single-phase simulations were run that used similar input decks. The results indicate that the single-phase flow predicted by the two codes was very similar, however RELAP5-3D appears to predict a higher system flow during the two-phase transient when compared to the flow rates predicted by RELAP5-MOD3.3. Furthermore, RELAP5-3D run did not capture the density wave oscillations or geysering phenomena, which are large oscillation flow instabilities observed in the experimental facility. To further the prediction capabilities for capturing two-phase instabilities, Options 55, 57, 58, 61, which are implemented by default in RELAP5-MOD3.3 but not in RELAP5-3D, were investigated. When enabling Option 61, RELAP5-3D agrees well with MOD3.3 in predicting the total system flow, while other options have negligible effect on the predicted total system flow by RELAP5-3D. However, none of these options enables RELAP5-3D to produce the same flow instabilities. For future steps, efforts are currently underway to investigate RELAP5-3D’s different behavior in predicting low-pressure two-phase instabilities. STAR-CCM+ was used to perform CFD analysis of the water-based test facility and provide simulation results for comparisons to experimental data. Efforts first focused on describing the characteristics of flow within the heated cavity. A study was performed on whether possible leakage flow between the two sides of the cavity could substantially impact and explain the results. An additional second assumption was examined which defined adiabatic side walls, so physical insulation structures were added to the models to allow conduction across this outer insulation. The results suggest that potential porosity of the insulation could be a major factor in the temperature distribution within the cavity and should be considered in any studies where it is desirable to know the cavity wall temperatures to higher accuracy.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Soft and hard aspects of QCD dynamics in hadronic form factors

I give an overview of (mostly my own) work on aspects of QCD dynamics in hadronic form factors at large momentum transfer. The topics include a discussion of basics of soft and hard mechanisms, QCD sum rule applications, and connection of form factors to generalized parton distributions.

Radyushkin, Anatoly↗

HFIR High Power HEU Neutronics Analyses

Department of Energy National Nuclear Security Administration Office of Material Management and Minimization’s mission includes the conversion of civilian research reactors from highly enriched uranium (HEU) to low-enriched uranium (LEU) fuel. Analyses have shown that the Oak Ridge National Laboratory High Flux Isotope Reactor (HFIR) will need to operate at 95 MW for the LEU silicide dispersion fuel designs to match key performance metrics obtained with HEU fuel at 85 MW. To prove safe operation of HFIR after installation of plant modifications to increase power, a high power HEU test cycle was proposed. Neutronics model updates and reactor physics analyses are performed to support the development of safety design reports for the high power (HP) HEU test cycle. Reactor physics metrics evaluated herein include fuel depletion, actinide production, cycle length, fission rate density distributions, axial power peaking factors, and reactor kinetic parameters. These reactor physics analyses support the development of future LEU safety design reports by providing key input for future HP HEU HFIR thermal hydraulics and reactor transient safety analyses.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

HFIR LEU High Density Silicide Dispersion Optimized Design Neutronics Analyses with PHAME

A high-fidelity neutronics model of the Oak Ridge National Laboratory High Flux Isotope Reactor (HFIR) with the low-enriched uranium (LEU) high-density silicide dispersion Optimized fuel design was updated and analyzed to generate reactor physics-based metrics to support follow-on thermal hydraulic and transient analyses of this design. The Python HFIR Analysis and Measurement Engine (PHAME) was also updated to enhance the automation capabilities of the framework developed and maintained to perform these reactor physics modeling and simulation efforts. The automated framework significantly increases the efficiency and reproducibility to design and thoroughly analyzes HFIR LEU core designs, changes, and uncertainties. Reactor physics metrics evaluated include but are not limited to fuel depletion, cycle length, fission rate density distributions, axial power peaking factors, kinetics data, reactivity coefficients, control element worths, heat deposition rates, and decay heat. These neutronics results provide essential input to follow-on steady state thermal, thermal hydraulic and reactor transient analyses, which are subject of other reports. The Optimized design operates at 95 MW to maintain HFIR’s current highly enriched uranium core performance level at 85 MW.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

J/Psi Photoproduction Near Threshold With CLAS12

The structure of the proton is comprised of quarks and a sea of gluons. A mechanism that can extract the characteristics of the hidden-color correlations of the nuclear wavefunction is the production of charm near threshold. Due to the fact that momentum transfer is large near threshold in the production of J/ψ , all three valence quarks must act coherently to ex- change energy for the reaction to occur. Models have been developed to predict the nature of J/ψ photoproduction at these specific energies. These include production mechanisms with the two-gluon and three-gluon exchanges. The transferred momentum dependence of the differential cross sections are sensitive to the gluonic form factors, which describe the distribution of color charge in the proton. The CLAS12 detector is capable of measuring J/ψ photoproduction at the energy range close to the threshold. Work showcased in this dissertation encompasses the preparation of the CLAS12 experiments, including the optimization of tracking reconstruction through the study of the Torus magnetic field. In terms of software, contributions were made to the CLAS12 Event Builder, a key stage of reconstruction where event-by-event information is summarized for efficient data analysis. After the run periods were successfully completed, analysis of the RG-A data commenced and an analysis framework was developed to measure the differential and total cross sections of J/ψ photoproduction in Hall B.

Newton, Joseph↗

Photoinhibition of comammox reaction in Nitrospira inopinata in a dose- and wavelength-dependent manner

Apparent contribution of complete ammonia-oxidizing organisms (comammox) to the global nitrogen cycle highlights the necessity for understanding niche differentiation of comammox bacteria among other ammonia oxidizers. While the high affinity for ammonia of the comammox species Nitrospira inopinata suggests their niche partitioning is expected to be centered in oligotrophic environments, their absence in nutrient-depleted environments (such as the oceans) suggests that other (abiotic) factors might control their distribution and spatial localization within microbial communities. Many ammonia- and nitrite-oxidizing organisms are sensitive to light; however, the photosensitivity of comammox has not been explored. Since comammox bacteria encode enzymatic machinery homologous to canonical ammonia-and nitrite-oxidizers, we hypothesized that comammox N. inopinata, the only available pure culture of this group of microorganisms, may be inhibited by illumination in a similar manner. We evaluated the impact of light intensity, wavelength, and duration on the degree of photoinhibition for cultures of the comammox species N. inopinata and the soil ammonia-oxidizing archaea Nitrososphaera viennensis. Both species were highly sensitive to light. Interestingly, mimicking diurnal light exposure caused an uncoupling of ammonia and nitrite oxidation in N. inopinata, indicating nitrite oxidation might be more sensitive to light exposure than ammonia oxidation. It is likely that light influences comammox spatial distribution in natural environments such as surface fresh waters according to diurnal cycles, light attenuation coefficients, and the light penetration depths. Our findings therefore provide ecophysiological insights for further studies on comammox both in field and laboratory settings.

59 BASIC BIOLOGICAL SCIENCES↗

A Compound Poisson Generator Approach to Point-source Inference in Astrophysics

Abstract The identification and description of point sources is one of the oldest problems in astronomy, yet even today the correct statistical treatment for point sources remains one of the field’s hardest problems. For dim or crowded sources, likelihood-based inference methods are required to estimate the uncertainty on the characteristics of the source population. In this work, a new parametric likelihood is constructed for this problem using compound Poisson generator (CPG) functionals that incorporate instrumental effects from first principles. We demonstrate that the CPG approach exhibits a number of advantages over non-Poissonian template fitting (NPTF)—an existing method—in a series of test scenarios in the context of X-ray astronomy. These demonstrations show that the effect of the point-spread function, effective area, and choice of point-source spatial distribution cannot, generally, be factorized as they are in NPTF, while the new CPG construction is validated in these scenarios. Separately, an examination of the diffuse-flux emission limit is used to show that most simple choices of priors on the standard parameterization of the population model can result in unexpected biases: when a model comprising both a point-source population and diffuse component is applied to this limit, nearly all observed flux will be assigned to either the population or to the diffuse component. A new parameterization is presented for these priors that properly estimates the uncertainties in this limit. In this choice of priors, CPG correctly identifies that the fraction of flux assigned to the population model cannot be constrained by the data.

79 ASTRONOMY AND ASTROPHYSICS↗

Bioaerosol Properties using WIBS from SAIL on Mt. Crested Butte, CO

We deployed a Wideband Integrated Bioaerosol Sensor (WIBS-Neo, DMT) to measure different properties of fluorescent bioaerosol particles (FBAP) during SAIL. Our measurements were collected at the supplementary site on Crested Butte Mountain from inside the ARM Aerosol Observing System (AOS) sampling from the AOS inlet. We had two deployment periods at SAIL during biologically active seasons: summer 2022 (15 June 2022 - 13 September 2022) and spring 2023 (21 March 2023 - 19 June 2023). The WIBS is an online single-particle measurement that detects FBAPs (within a size range of 0.5 - 30 microns in diameter) based on the excitation and emission wavelengths of the individual particles. Using two xenon lamps, the WIBS excites FBAPs at 280 nm and 370 nm. Their emission is detected across two wavebands of 310-400 nm and 420-650 nm. We classified the FBAPs into seven different categories (A, B, C, AB, BC, AC, and ABC) using the classification scheme in Perring et. al. (2015) [1]. Here, we report one-minute averaged number concentration of FBAPs (total and by category) and NFBAPs. We also present one-minute-averaged size distributions and the asymmetry factor (AF, a surrogate for shape) of all FBAPs and NFBAPs. The logarithmic bin width of the size bins is the same as the average bin width of the AOS's optical particle counter (OPC, Grimm) for the range of sizes in which they overlap (26 bins from 0.5 - 30 microns). AF of the particles ranges from 0-100 and is divided into five bins with a linear spacing at increments of 20. The smallest AF bin represents more spherical particles while the largest bin represents more rod-shaped particles. We recommend referring to the readme file for more details of the variables present in the files. [1] Perring, A. E., et al. (2015), Airborne observations of regional variation in fluorescent aerosol across the United States, J. Geophys. Res. Atmos., 120, 1153-1170, doi:10.1002/2014JD022495. Abstract and description of the campaign can be found here: https://www.arm.gov/research/cam

54 ENVIRONMENTAL SCIENCES↗

Transition core modeling for extended enrichment, accident tolerant fuel using PARCS/Polaris

Current plans and efforts from reactor operators and vendors to include extended enrichment (EE) and accident-tolerant fuel (ATF) in current reactor fleets motivate the study of these changes in reactor physics analysis. This work uses the US Nuclear Regulatory Commission core simulator PARCS to do the core calculation and SCALE Polaris lattice physics code to generate the required homogenized, few-group constants. The lattice model used is based on the GE-14 10x10 assemblies with UO{sub 2} fuels. Both nominal core and transition core are studied in this work, and both cores use GE-14 10x10 assemblies with UO{sub 2} fuel. The nominal core uses regular UO{sub 2} fuel with a maximum enrichment of 5 wt % and ZIRC-2 cladding. The ATF transition core uses FeCrAl cladding and regular UO{sub 2} fuel, while the EE-ATF transition core uses FeCrAl cladding with UO{sub 2} fuel with 8 max wt % enrichment. The accuracy presented in the colorset models verified the capability of the PARCS/Polaris procedures for the transition core analysis. For the whole core calculation, the ATF and EE-ATF transition core models were made in addition to the nominal core model. The core parameters to study are the core power distribution and power peaking factor, doppler temperature coefficients, and control rod worth at cold zero power and hot full power. Comparing the core parameters of the transition cores with the nominal core in PARCS, the results suggest that there is no unexpected outcome for the implementation of ATF and EE fuels. (authors)

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Light mesons with one dynamical gluon on the light front

We obtain the light meson mass spectroscopy from the light-front quantum chromodynamics (QCD) Hamiltonian, determined for their constituent quark-antiquark and quark-antiquark-gluon Fock components, together with a three-dimensional confinement. The eigenvectors of the light-front effective Hamiltonian provide a good quality description of the pion electromagnetic form factor, decay constant, and the valence quark distribution functions following QCD scale evolution. We also show that the pion's gluon densities can be probed through the pion-nucleus induced $J/ψ$ production data. Our pion parton distribution functions provide excellent agreement with $J/ψ$ production data from widely different experimental conditions.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

A Cooperative Game Theory-based Secondary Frequency Regulation in Distribution Systems

Participation of distribution systems in frequency regulation has become an important factor for grid operation after the integration of distributed energy resources (DERs). While available reserves from a single distribution system may not be sufficient for frequency regulation, aggregated reserves from several distribution systems can provide frequency regulation at grid-scale. This paper proposes a cooperative game theory-based approach for secondary frequency regulation in distribution systems consisting of distributed energy resources (DERs). A two-stage strategy is proposed to effectively and precisely determine a change in active power set points of DERs following a command from system operators. In the first stage, the value or worth of each DER and their coalitions are determined using initial rates of change of frequency (ROCOF) for each DER/coalition. In the second stage, the Shapley value, one of the solution concepts of cooperative game theory, is used to determine changes in active power set points of DERs. The proposed method is implemented on several distribution systems including a modified IEEE 13-node system and modified 33-node distribution system.

Gautam, Mukesh↗

The Effect of the Velocity Distribution on Kilonova Emission

The electromagnetic emission from the nonrelativistic ejecta launched in neutron star mergers (either dynamically or through a disk wind) has the potential to probe both the total mass and composition of this ejecta. These observations are crucial in understanding the role of these mergers in the production of r-process elements in the Universe. However, many properties of the ejecta can alter the light curves and we must both identify which properties play a role in shaping this emission and understand the effects these properties have on the emission before we can use observations to place strong constraints on the amount of r-process elements produced in the merger. This paper focuses on understanding the effect of the velocity distribution (amount of mass moving at different velocities) for lanthanide-rich ejecta on the light curves and spectra. The simulations use distributions guided by recent calculations of disk outflows and compare the velocity-distribution effects to those of ejecta mass, velocity, and composition. Our comparisons show that uncertainties in the velocity distribution can lead to a factor of 2–4 uncertainties in the inferred ejecta mass based on peak infrared luminosities. We also show that early-time UV or optical observations may be able to constrain the velocity distribution, reducing the uncertainty in the ejecta mass.

79 ASTRONOMY AND ASTROPHYSICS↗

The Effect of the Velocity Distribution on Kilonova Emission

Abstract The electromagnetic emission from the nonrelativistic ejecta launched in neutron star mergers (either dynamically or through a disk wind) has the potential to probe both the total mass and composition of this ejecta. These observations are crucial in understanding the role of these mergers in the production of r -process elements in the Universe. However, many properties of the ejecta can alter the light curves and we must both identify which properties play a role in shaping this emission and understand the effects these properties have on the emission before we can use observations to place strong constraints on the amount of r -process elements produced in the merger. This paper focuses on understanding the effect of the velocity distribution (amount of mass moving at different velocities) for lanthanide-rich ejecta on the light curves and spectra. The simulations use distributions guided by recent calculations of disk outflows and compare the velocity-distribution effects to those of ejecta mass, velocity, and composition. Our comparisons show that uncertainties in the velocity distribution can lead to a factor of 2–4 uncertainties in the inferred ejecta mass based on peak infrared luminosities. We also show that early-time UV or optical observations may be able to constrain the velocity distribution, reducing the uncertainty in the ejecta mass.

79 ASTRONOMY AND ASTROPHYSICS↗