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At least 163 records · Page 9

INCREASING THE TRANSPARENCY AND REPRODUCIBILITY OF SPACE RADIATION SCIENCE: THE RADIATION BIOLOGY ONTOLOGY

Among the primary objectives of the Open/Open-Source Science paradigm are making scientific investigation data transparent and results reproducible [1], objectives shared by the FAIR principles [2]. To accomplish this, the conceptual framework that includes all the investigation objects needs to be accurately captured and communicated to all data consumers. A large part of this requires using metadata standards to annotate data collected. These standards should be readily accessible, informed by scientific community consensus and sufficiently specific to encompass all of the important aspects of the investigation. Starting in 2020 we have been co-leading an open consortium to develop a new metadata standard, the Radiation Biology Ontology (RBO), through the Open Biological and Biomedical Ontologies (OBO) Foundry [3]. We began by transforming many of the terms from the National Council on Radiation Protection and Measurement into concepts that can be formally related to existing OBO Foundry classes or attributes. We then identified and imported into the RBO existing OBO Foundry classes that have obvious relevance for radiation biomedicine (for example, concepts from the Environment Ontology that describe radiative processes, and concepts from the Gene Ontology dealing with molecular and cellular responses to radiation). Finally, we scrutinized datasets from investigations of radiation effects held in NASA GeneLab and LSDA repositories and added additional classes, instances, and attributes into the RBO that should be used to annotate these data. We developed the RBO using the open-source tools of GitHub and publish the RBO periodically through the NIH/NCBI BioPortal website, so systems worldwide can leverage the knowledge it contains [4]. This initial phase of concept modeling has yielded an RBO that at present has more than 300 declared concepts, with more than 3500 additional concepts imported from other OBO Foundry ontologies. While this first phase has focused on concepts for annotating samples, environments, exposures, and measurements, the next phase will center on supporting annotation of results and findings, such as concept models of molecular, cellular and tissue effects. The value of the RBO will be determined in part by our ability to engage the community in its development, and we have established a Radiobiology Informatics Consortium with unrestricted membership as the owner of the RBO in order to encourage investigators, system owners and other to join in this effort. Anyone can report issues or request new concept modeling or other features directly on GitHub. By using the BioPortal application programming interface, systems can pose dynamic queries to the latest version of the RBO for information on individual classes or entire hierarchies; this design eliminates the need for systems to be updated in order to use newer versions of the RBO. We hope to contribute to the advancement of open radiobiological science through the continued, open development of the RBO, that will provide more precise, machine-interpretable descriptions of investigations, as well as support data meta-analysis through machine learning or other artificial intelligence methods.

knowledge↗

Hybrid Electric Turbofan Example Model

This powerpoint will be presented at a monthly Numerical Propulsion System Simulation (NPSS) Consortium monthly meeting. The presentation covers a simple example model that is being proposed to demonstrate how to model electrified propulsion systems in NPSS. The NPSS consortium expects to see its members modeling more electrified propulsion systems in the future and sees a need for a comprehensive example model for these systems, to demonstrate and standardize how these models are constructed.

Hydro Electric Turbofan↗

A Pipeline for Assessing the Quality of Rna-Seq Datasets in GeneLab

Transcriptome profiling by RNA sequencing (RNA-seq) is a powerful approach to identify gene expression changes in organisms exposed to unique environments such as spaceflight. One of the challenges of evaluating RNA-seq data both within and across different space-relevant studies is the ability to control for technical differences, including the use of different library preparation kits, sequencing platforms, RNA yield, and person-to-person variation. To help address this issue, the National Institute of Standards and Technology (NIST, nist.gov) initiated a consortium, at the request of industry and academia, to develop a set of controls for gene expression measurements. The result was a set of 92 unlabeled, polyadenylated transcripts that range from 250 – 2,000 nucleotides in length to mimic natural eukaryotic mRNAs. These External RNA Controls Consortium (ERCC) genes can be used in any RNA-seq experiment, by adding known concentrations of the ERCC genes to samples after RNA extraction, to offer a standard measurement for data comparison. At NASA GeneLab, we employ these controls as part of our standard operating procedures for every in-house RNA-seq study to assess the limit of detection, dynamic range, and power of differential expression analysis both within and across experiments. Here we will discuss the use, benefits, and limitations of ERCC genes and other types of controls, such as universal RNA references, to generate quality control information for RNA-seq studies conducted at GeneLab.

GeneLab↗

SatCORPS Global Cloud Composite (GCC): the Design and Delivery of A High Quality, High Resolution, Global Cloud Product Available in Near-Real Time

The NASA Satellite ClOud and Radiation Property retrieval System (SatCORPS) supports the development of an analysis ready and cloud-optimized data transformation pipeline and geospatial service enablement of a global cloud composite (GCC) product derived from global geostationary satellite imagery. This geospatial service will be available at high temporal and spatial resolution via the SatCORPS web mapping application for visualization and analysis as well as direct ingestion to common geospatial software and custom programming. The resulting global cloud composite products from the processing pipeline can then be geospatially-service enabled as ArcGIS Image Services and Open Geospatial Consortium (OGC) Web Mapping/Coverage Services for visualization and analysis via a web mapping application and common geospatial software. Near real time global observations are created through the composition of five geostationary satellites that provides modelling and forecasting communities with the capability to provide high quality and timely information to start the projection process. The Global Cloud Composite product combines information from geostationary satellites, GOES-16, GOES-17, Himawari-8, Meteosat-11 and Meteosat-9 to create a single global composite netcdf file and images using the different products within the netcdf file. The SatCORPS team, though our Global Cloud Composite (GCC) product and web-based visualization tools including Geographical Information System (GIS) services provide near real time global cloud product information to both automated processes and traditional web users that is timely and high quality derived from geostationary satellites. The Global Cloud Composite product takes advantage of the scalable processing resources provided by the AWS batch service to provide new composites every thirty minutes. Because information from each of the low earth orbiting satellites is available on schedules tuned to the specific satellite, the processing algorithm temporally composites the final dataset as each satellite’s information becomes available. The SatCORPS team has leveraged our experience using Amazon Web Services (AWS) to build a low latency high availability tool that allows end users both human and automated to acquire high quality and high-resolution Geostationary Earth Orbiting (GEO) information at zero cost to the end user. This presentation will describe how we architected and implemented the service as well as lessons learned based on our experiences both developing and operating the system. The lessons learned include how we integrated multiple services including Amazon Batch, Amazon S3 and Amazon Lambda service to create a low cost but high-performance processing system that is capable of identifying and processing the most appropriate satellite overpass information into global cloud composites. We will also describe our web-based tools including our Geographic Information System that can be used for visualization and analysis. The products from the processing can be geospatially-service enabled as ArcGIS Image Services and Open Geospatial Consortium (OGC) Web Mapping/Coverage Services for visualization and analysis via a web mapping application and common geospatial software. The SatCORPS Global Composite Cloud product provides sophisticated global composited cloud research products with very low latency that we see that as filling a rapidly growing need in the research and modelling community with no up-front nor ongoing costs associated with downloading or using the information.

AWS AMCE SMCE GCC SATCORPS GLOBAL CLOUD COMPOSITE ↗

Large Volume, Optical and Opto-Mechanical Metrology Techniques for ISIM on JWST

The final, flight build of the Integrated Science Instrument Module (ISIM) element of the James Webb Space Telescope is the culmination of years of work across many disciplines and partners. This paper covers the large volume, ambient, optical and opto-mechanical metrology techniques used to verify the mechanical integration of the flight instruments in ISIM, including optical pupil alignment. We present an overview of ISIM's integration and test program, which is in progress, with an emphasis on alignment and optical performance verification. This work is performed at NASA Goddard Space Flight Center, in close collaboration with the European Space Agency, the Canadian Space Agency, and the Mid-Infrared Instrument European Consortium.

ISIM↗

Progress Report on the Airborne Composition Standard Variable Name and Time Series Working Groups of the 2017 ESDSWG

The role of NASA's Earth Science Data Systems Working Groups (ESDSWG) is to make recommendations relevant to NASA's Earth science data systems from users' experiences and community insight. Each group works independently, focusing on a unique topic. Progress of two of the 2017 Working Groups will be presented. In a single airborne field campaign, there can be several different instruments and techniques that measure the same parameter on one or more aircraft platforms. Many of these same parameters are measured during different airborne campaigns using similar or different instruments and techniques. The Airborne Composition Standard Variable Name Working Group is working to create a list of variable standard names that can be used across all airborne field campaigns in order to assist in the transition to the ICARTT Version 2.0 file format. The overall goal is to enhance the usability of ICARTT files and the search ability of airborne field campaign data. The Time Series Working Group (TSWG) is a continuation of the 2015 and 2016 Time Series Working Groups. In 2015, we started TSWG with the intention of exploring the new OGC (Open Geospatial Consortium) WaterML 2 standards as a means for encoding point-based time series data from NASA satellites. In this working group, we realized that WaterML 2 might not be the best solution for this type of data, for a number of reasons. Our discussion with experts from other agencies, who have worked on similar issues, identified several challenges that we would need to address. As a result, we made the recommendation to study the new TimeseriesML 1.0 standard of OGC as a potential NASA time series standard. The 2016 TSWG examined closely the TimeseriesML 1.0 and, in coordination with the OGC TimeseriesML Standards Working Group, identified certain gaps in TimeseriesML 1.0 that would need to be addressed for the standard to be applicable to NASA time series data. An engineering report was drafted based on the OGC Engineering Report template, describing recommended changes to TimeseriesML 1.0, in the form of use cases. In 2017, we are conducting interoperability experiments to implement the use cases and demonstrate the feasibility and suitability of these modifications for NASA and related user communities. The results will be incorporated into the existing draft engineering report.

OGC (Open Geospatial Consortium) WaterML 2 standar↗

The particle track record of Fra Mauro.

Apollo 14 breccias show a mixture of high and low track densities at most interior positions, indicating that the majority of the tracks have been inherited from the parent ingredients of the breccias. Using the lowest of these track densities as indicative of maximum postbrecciation surface residence times, we find a median 1.35 m.y., much younger than the less friable Apollo 11 and 12 igneous rocks. The igneous rock 14310 is studied as a part of a consortium, the results indicating a complex irradiation history. Soils are extremely variable, median track densities ranging over at least a factor of 200. Individual high density soil grains yield track density gradients having variable slopes, most of which are lower than expected from the Surveyor III filter glass results.

Hart, H. R., Jr.↗

Investigations on classification categories for wetlands of Chesapeake Bay using remotely sensed data

The use of remote sensors to determine the characteristics of the wetlands of the Chesapeake Bay and surrounding areas is discussed. The objectives of the program are stated as follows: (1) to use data and remote sensing techniques developed from studies of Rhode River, West River, and South River salt marshes to develop a wetland classification scheme useful in other regions of the Chesapeake Bay and to evaluate the classification system with respect to vegetation types, marsh physiography, man-induced perturbation, and salinity; and (2) to develop a program using remote sensing techniques, for the extension of the classification to Chesapeake Bay salt marshes and to coordinate this program with the goals of the Chesapeake Research Consortium and the states of Maryland and Virginia. Maps of the Chesapeake Bay areas are developed from aerial photographs to display the wetland structure and vegetation.

Williamson, F. S. L.↗

Earth resources technology satellite /ERTS/ data collection and transmission buoys for inland, neritic and oceanic waters

As a result of a consortium of several industries and organizations, an economical, versatile, and stable data collection and transmission buoy has been designed, developed, and deployed to gather and transmit water quality data to a ground receiving station at three-minute intervals and to the earth resources technology satellite (ERTS) as it passes over the deployed buoy every 12 hours. The buoy system, designed for both fresh and salt water application, gathers data inclusive of temperature measurement, conductivity, relative acidity, dissolved oxygen, current speed, and direction. The mechanical design philosophy used to determine and satisfy boundary conditions involving stability, ease of deployment, servicing and maintenance, minimal manufacturing costs, and fresh and salt water installation capability is discussed. The development of peripheral handling equipment and anchoring systems is described.

Chapman, W. S.↗

Lunar Science Conference, 7th, Houston, Tex., March 15-19, 1976, Proceedings. Volume 1 - Regolith studies. Volume 2 - Petrogenetic studies of mare and highland rocks. Volume 3 - The moon and other bodies

Attention is given to lunar core studies (multi-core, deep drill, and drive tube), surface soil studies (petrography and geochemistry, light and volatile element studies, and agglutinate related studies), and surfaces process studies. Also considered are mare basalts, with emphasis on mineralogy and petrology, chemical and isotopic studies, and constraints and models of basalt evolution, along with breccia and highland samples with attention given to geochronology, boulders and consortium studies and the formation of highland samples. Remote sensing and photogeology of the moon, crustal bombardment, physical properties of the moon, and comparative planetology are also discussed.

Merrill, R. B.↗

The exploration of Venus

The paper outlines the evolution of the Pioneer Venus program from the initial meeting of a consortium of scientists to study the feasibility of a simple entry probe to Venus, through the Planetary Explorer missions, to the Orbiter Mission proposals. Major recommendations of the 1970 National Academy of Sciences study on Venus exploration planning and of the 1972 Pioneer Venus Science Steering Group report are mentioned.

Colin, L.↗

Developing satellite communications for public service: Prospects in four service areas

The Public Service Satellite Consortium evaluated prospects for satellite telecommunications in four areas of the public service: the U.S. health care system, elementary and secondary education, American libraries, and that sector of the public service which is concerned with the provision of continuing education to health professionals. Three important conclusions were reached. First, throughout the public service there are three recurring needs: improved access, cost containment, and maintenance of quality. Appropriate application of communication satellite systems could ameliorate each of these concerns. Second, there appears to be an enormous latent demand for data communication services throughout the public service. The potential demand in 1982 to support requirements in hospital administration, library services and other information-retrieval activities, equipment maintenance, and environmental monitoring may be in excess of $300 million a year. Third, administrative applications of data communication networks show particular promise, especially in rural areas.

Source record↗

Lunar Science Conference, 8th, Houston, Tex., March 14-18, 1977, Proceedings. Volume 1 - The moon and the inner solar system. Volume 2 - Petrogenetic studies of mare and highland rocks. Volume 3 - Planetary and lunar surfaces

Solar system processes are considered along with the origin and evolution of the moon, planetary geophysics, lunar basins and crustal layering, lunar magnetism, the lunar surface as a planetary probe, remote observations of lunar and planetary surfaces, earth-based measurements, integrated studies, physical properties of lunar materials, and asteroids, meteorites, and the early solar system. Attention is also given to studies of mare basalts, the kinetics of basalt crystallization, topical studies of mare basalts, highland rocks, experimental studies of highland rocks, geochemical studies of highland rocks, studies of materials of KREEP composition, a consortium study of lunar breccia 73215, topical studies on highland rocks, Venus, and regional studies of the moon. Studies of surface processes, are reported, taking into account cratering mechanics and fresh crater morphology, crater statistics and surface dating, effects of exposure and gardening, and the chemistry of surfaces.

Merril, R. B.↗

Imaging of lunar surface chemistry from orbital X-ray data

Color images of the lunar surface from 20 deg W to 120 deg E were prepared which map the variations in the distribution of Al, Mg, and Si as expressed by the ratios of the Al/Si and the Mg/Al fluorescent X-ray intensities. Through the use of image enhancement techniques developed for the La Jolla Consortium on remote sensing of the moon, detailed information previously unobserved has been made available. The frequency distribution of the Apollo 15 and 16 intensity ratios for individual 0.25 x 0.25 deg surface units is clearly bimodal, peaking at 0.81 for mare material and 1.12 for nearside highland material, which values correspond to concentration ratios of 0.39 and 0.54, respectively, for Al/Si.

Bielefeld, M. J.↗

An array processing system for lunar geochemical and geophysical data

A computerized array processing system has been developed to reduce, analyze, display, and correlate a large number of orbital and earth-based geochemical, geophysical, and geological measurements of the moon on a global scale. The system supports the activities of a consortium of about 30 lunar scientists involved in data synthesis studies. The system was modeled after standard digital image-processing techniques but differs in that processing is performed with floating point precision rather than integer precision. Because of flexibility in floating-point image processing, a series of techniques that are impossible or cumbersome in conventional integer processing were developed to perform optimum interpolation and smoothing of data. Recently color maps of about 25 lunar geophysical and geochemical variables have been generated.

Eliason, E. M.↗

Emerging markets for satellite data communications in the public service

The paper discusses some of the current and potential markets for satellite data communications as projected by the Public Service Satellite Consortium (PSSC). Organizations in the public service sector are divided into three categories, depending on their expected benefits and organizational changes due to increased satellite telecommunications use: A - modest institutional adjustments are necessary and significant productivity gains are likely; B - institutional requirements picture is promising, but more information is needed to assess benefits and risk; and C - major institutional adjustments are needed, risks are high but possible benefits are high. These criteria are applied to the U.S. health care system, continuing education, equipment maintenance, libraries, environmental monitoring, and other potential markets. The potential revenues are seen to be significant, but what is needed is a cooperative effort by common carriers and major public service institutions to aggregate the market.

Potter, J. G.↗

Chemistry, mineralogy and petrology of seven greater than 1 mm fragments from Mare Crisium

Results are summarized for a consortium study of the chemistry, mineralogy, and petrology of seven Luna 24 fragments greater than 1 mm in size and having a mass of about 2 mg each. The fragments include four samples of mare ferrobasalt composition, one vitrophyre with the composition of a Mg-rich VLT mare basalt, one agglutinate, and one plagioclase fragment. It is found that: (1) the ferrobasalt is a highly fractionated mare rock very low in alkalis and TiO2, is similar to the less fractionate Apollo 17 VLT basalts, and is quite low in large-ion lithophile trace-element content; (2) the rare-earth-element patterns of the ferrobasalts are typical of VLT basalt, but some ophitic basalts have positive Eu anomalies, while others have negative Eu anomalies typical of mare basalts; and (3) the agglutinate is feldspathic and similar in composition to soil fines in Fe, Cr, Ca, and Al.

Laul, J. C.↗