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At least 163 records · Page 9

Molecular Dynamics Simulation of the Antiamoebin Ion Channel: Linking Structure and Conductance

Molecular dynamics simulations were carried out in order to ascertain which of the potential multimeric forms of the transmembrane peptaibol channel, antiamoebin, is consistant with its measured conductance. Estimates of the conductance obtained through counting ions that cross the channel and by solving the Nernst-Planck equation yield consistent results, indicating that the motion of ions inside the channel can be satisfactorily described as diffusive.The calculated conductance of octameric channels is markedly higher than the conductance measured in single channel recordings, whereas the tetramer appears to be non-conducting. The conductance of the hexamer was estimated to be 115+/-34 pS and 74+/-20 pS, at 150 mV and 75 mV, respectively, in satisfactory agreement with the value of 90 pS measured at 75 mV. On this basis we propose that the antiamoebin channel consists of six monomers. Its pore is large enough to accommodate K(+) and Cl(-) with their first solvation shells intact. The free energy barrier encountered by K(+) is only 2.2 kcal/mol whereas Cl(-) encounters a substantially higher barrier of nearly 5 kcal/mol. This difference makes the channel selective for cations. Ion crossing events are shown to be uncorrelated and follow Poisson statistics. keywords: ion channels, peptaibols, channel conductance, molecular dynamics

Wilson, Michael A.↗

The Distribution of Lightning Channel Lengths in Northern Alabama Thunderstorms

Lightning is well known to be a major source of tropospheric NOx, and in most cases is the dominant natural source (Huntreiser et al 1998, Jourdain and Hauglustaine 2001). Production of NOx by a segment of a lightning channel is a function of channel segment energy density and channel segment altitude. A first estimate of NOx production by a lightning flash can be found by multiplying production per segment [typically 104 J/m; Hill (1979)] by the total length of the flash s channel. The purpose of this study is to determine average channel length for lightning flashes near NALMA in 2008, and to compare average channel length of ground flashes to the average channel length of cloud flashes.

Peterson, H. S.↗

Limitation of Ground-based Estimates of Solar Irradiance Due to Atmospheric Variations

The uncertainty in ground-based estimates of solar irradiance is quantitatively related to the temporal variability of the atmosphere's optical thickness. The upper and lower bounds of the accuracy of estimates using the Langley Plot technique are proportional to the standard deviation of aerosol optical thickness (approx. +/- 13 sigma(delta tau)). The estimates of spectral solar irradiance (SSI) in two Cimel sun photometer channels from the Mauna Loa site of AERONET are compared with satellite observations from SOLSTICE (Solar Stellar Irradiance Comparison Experiment) on UARS (Upper Atmospheric Research Satellite) for almost two years of data. The true solar variations related to the 27-day solar rotation cycle observed from SOLSTICE are about 0.15% at the two sun photometer channels. The variability in ground-based estimates is statistically one order of magnitude larger. Even though about 30% of these estimates from all Level 2.0 Cimel data fall within the 0.4 to approx. 0.5% variation level, ground-based estimates are not able to capture the 27-day solar variation observed from SOLSTICE.

Wen, Guoyong↗

Curves, Coriolis, and Cross-Channel Circulation in the Hudson River Estuary

Abstract Despite its relatively small magnitude, cross-channel circulation in estuaries can influence the along-channel momentum balance, dispersion, and transport. We investigate spatial and temporal variation in cross-channel circulation at two contrasting sites in the Hudson River estuary. The two sites differ in the relative strength and direction of Coriolis and curvature forcing. We contrast the patterns and magnitudes of flow at the two sites during varying conditions in stratification driven by tidal amplitude and river discharge. We found well-defined flows during flood tides at both sites, characterized by mainly two-layer structures when the water column was more homogeneous and structures with three or more layers when the water column was more stratified. Ebb tides had generally weaker and less definite flows, except at one site where curvature and Coriolis reinforced each other during spring tide ebbs. Cross-channel currents had similar patterns, but were oppositely directed at the two sites, demonstrating the importance of curvature even in channels with relatively gradual curves. Coriolis and curvature dominated the measured terms in the cross-channel momentum balance. Their combination was generally consistent with driving the observed patterns and directions of flow, but local acceleration and cross-channel advection made some notable contributions. A large residual in the momentum balance indicates that some combination of vertical stress divergence, baroclinic pressure gradients, and along-channel and vertical advection must play an essential role, but data limitations prevented an accurate estimation of these terms. Cross-channel advection affected the along-channel momentum balance at times, with implications for the exchange flow’s strength. Significance Statement Currents that flow across the channel in an estuary move slower than those flowing along the channel, but they can transport materials and change water properties in important ways, affecting human uses of estuaries such as shipping, aquaculture, and recreation. We wanted to better understand cross-channel currents in the Hudson River estuary. We found that larger tides produced the strongest cross-channel currents with a two-layer pattern, compared to weaker currents with three layers during smaller tides. Higher or lower river flow also affected current strength. Comparing two locations, we saw cross-channel currents moving in opposite directions because of differences in the curvature of the river channel. Our results show how channel curvature and Earth’s rotation combine to produce cross-channel currents.

Conley, Margaret M.↗

Dependence of Lightning Cloud-Top Optical Emissions on Channel Characteristics Using Boltzmann Radiative Transfer Modeling

With an estimated global flash rate of 46 lightning per second, a significant amount of lightning nitrogen oxides (LNOx) are produced within the climate system. In turn, LNOx affect the concentrations of ozone (O 3 , an important greenhouse gas) as well as the very reactive hydroxyl radicals (OH, that affect all greenhouse gases). Thus, space-based estimation of LNOx is highly sought [Koshak 2017; Koshak et al. (2015)]. Total lightning channel length, L , is a proxy for the total flash energy (and hence LNOx production). Geostationary lightning mappers provide cloud-top 2D views of the diffuse (i.e., blurry) optical images of lightning, thereby making it difficult to determine L (and other channel features). Transient Boltzmann radiative transfer modeling is applied here to investigate the dependence of the spatio-temporal pattern of cloud-top lightning optical emissions on L and other channel characteristics (e.g., orientation, propagation direction, amplitude, location, ...).

William J Koshak↗

Numerical investigations of background pressure effects and channel erosion in the SPT-140 Hall thruster for the Psyche mission

Four SPT-140 Hall thrusters are the main components of the electric propulsion system for the Psyche mission. We employ the 2-D (r-z) code Hall2De to conduct numerical simulations of the SPT-140 with the goal of estimating erosion of the acceleration channel rings for the Psyche mission profile. The simulations are informed by direct measurements of the plasma conditions in the acceleration channel that were obtained using laser-induced fluorescence. We validate our simulation results with additional plasma measurements, wear test erosion rates, and performance data as a function of background pressure. We then make use of a series of numerical simulations to compute the progressive erosion of the channel walls, using as input parameters a profile for the Psyche mission that includes operation at 4.5, 2.5 and 1.0 kW with duration of all segments increased by a 50% margin. We find that the channel walls are not completely eroded at the end of the mission (plus 50% margin). We also observe a progressive decrease in thrust as the channel walls erode that is consistent with the wear test and flight data, with a rate of ~4.5 mN/kh for the first 2,500 h and constant thrust after that. The reasons for these thrust trends are explained.

Lenguito, Giovanni↗

The Impact of Pixel Size on the Characterization of Deep Convective Clouds for Calibration

The NASA CERES project provides the scientific community the observed TOA SW and LW fluxes for climate monitoring and climate model validation. CERES utilizes hourly geostationary imager derived broadband fluxes, which rely on the channel radiances and associated cloud retrievals, to estimate the broadband fluxes between CERES observations. This requires stable imager visible channel calibration, which the CERES project verifies by utilizing deep convective clouds (DCC) as an invariant Earth target. GSICS, which is an international collaboration, is also evaluating the DCC invariant target calibration methodology to provide consistent calibration coefficients across geostationary imagers anchored to the Aqua-MODIS calibration reference. Tropical DCC are the brightest, coldest, most Lambertian, top of the atmosphere Earth targets. The DCC invariant target calibration methodology relies on a large ensemble of tropical DCC-identified pixel-level reflectances, which are histogrammed to find the mode reflectance of the probability density function (PDF). The imager stability is monitored by tracking the monthly DCC PDF mode reflectance over time. Radiometric scaling is accomplished by ratioing the GEO and VIIRS DCC mode reflectance values. The PDF shape and mode dependency on sensor pixel resolution, which varies among sensors, is unknown. This study will characterize the impact of pixel resolution on the DCC PDFs by aggregating Landsat 30-m pixel reflectances into various coarser pixel resolutions ranging from 100-m to 4-km, and comparing the corresponding PDF statistics. This analysis will assist in improving the uncertainty in a DCC-based intercalibration between instruments with different pixel resolutions.

Conor Haney↗

NuQKD: A Modular Quantum Key Distribution Simulation Framework for Engineering Applications

Abstract An experimental Quantum Key Distribution (QKD) implementation requires advanced costly hardware, unavailable in most research environments, making protocol testing and performance evaluation complicated. This has been a major motivation for the development of QKD simulation frameworks, to allow researchers to obtain insight before proceeding into practical implementations. Several simulators have been introduced over the recent years. However, only four are publicly available, only one of which models equipment imperfections. Currently, no open‐source simulator includes all following capabilities: channel attenuation modelling, equipment imperfections and effects on key rates, estimation of elapsed time during classical and quantum‐ channel processes, use of truly random binary sequences for qubits and measurement bases, shared ‐bit fraction customization. In this paper, we present NuQKD, an open‐ source modular, intuitive simulator, featuring all the above capabilities. NuQKD establishes communication between two computer terminals, accepts custom user inputs (iterations, raw key size, attacker interception rate etc.) and evaluates the sifted key, Quantum Bit Error Rate (QBER), elapsed communication time, and more. NuQKD capabilities include optical fiber and free ‐space simulation, modeling of equipment/channel imperfections, bitstrings from True Random Number Generators, decoy‐state protocol support, and automated evaluation of performance metrics. We expect NuQKD to enable convenient and accurate representation of actual experimental conditions.

Gkouliaras, Konstantinos↗

Microwave properties of a quiet sea

The microwave flux responses of a quiet sea are observed at five microwave frequencies and with both horizontal and vertical polarizations at each frequency--a simultaneous 10 channel receiving system. The measurements are taken from Earth orbit with an articulating antenna. The 10 channel responses are taken simultaneously since they share a common articulating collector with a multifrequency feed. The plotted flux responses show: (1) the effects of the relative, on-axis-gain of the collecting aperture for each frequency; (2) the effects of polarization rotation in the output responses of the receive when the collecting aperture mechanically rotates about a feed that is fixed; (3) the difference between the flux magnitudes for the horizontal and vertical channels, at each of the five frequencies, and for each pointing position, over a 44 degree scan angle; and (4) the RMS value of the clutter--as reckoned over the interval of a full swath for each of the 10 channels. The clutter is derived from the standard error of estimate of the plotted swath response for each channel. The expected value of the background temperature is computed for each of the three quiet seas. The background temperature includes contributions from the cosmic background, the downwelling path, the sea surface, and the upwelling path.

Stacey, J.↗

Atmospheric moisture fields derived by satellite observations over the tropical Pacific Ocean

Values of precipitable water are retrieved over the tropical and subtropical Pacific Ocean from TOVS infrared and microwave channel brightness temperature and OLR observations by means of stepwise linear regression. The most useful temperature and moisture sensing channels are pre-selected from sensitivity tests of a radiative transfer model. Numerous models are developed and tested against collocated radiosonde observations and Nimbus-7 SMMR precipitable water estimates. For RAOB comparisons, the best estimator used 15 TOVS predictors and captured 71.1 deg percent of the variance (+0.62 g/sq cm standard error) for column precipitable water; for precipitable water of 700-500 mb bulk layer, these values were 71.7 percent and +/- 0.17 g/sq cm. Little skill of estimated precipitable water was obtained for moisture above 500 mb. Regressions were less skillful against SMMR, unless collocation parameters were tightly controlled; SMMR was less acceptable than RAOB's because of observational drift and errors. Generally, the most skillful predictors were boundary layer brightness temperatures of TOVS channels and satellite estimated stability indices. 'Moisture channels' were hardly useful except for estimating middle and upper tropospheric moisture. Additional regression models were constructed testing the sensitivity to different observational and meteorological characteristics. Models which used some in situ observations surface observations or stabilities calculated from RAOB, were the most successful. The best of these explained 87.5 percent of the variance but the regression selected almost no TOVS channels, relying instead on conventional RAOB and surface observations. A set of four regression models were developed, stratifying atmospheric characteristics on the basis of collocated OLR values. These models improved the variance explained by 5.0 percent; the model associated with the highest OLR values (275 W/sq m less than or equal to OLR; that is, no cloud) showed only marginal skill. Precipitable water fields were generated from the best TOVS-only model for seven days in January 1983 and compared with SMMR-estimated fields. OLR fields and ECMWF precipitable water analysis. The TOVS regression model compared favorably to the SMMR analysis in amplitudes and features. It revealed more evolving synoptic signal than the ECMWF analysis. In synoptically active regions, it differed with respect to the OLR analysis, primarily because of actual differences in the vertical distribution of water vapor.

Chung, Hyosang↗

Multichannel Phase and Power Detector

An electronic signal-processing system determines the phases of input signals arriving in multiple channels, relative to the phase of a reference signal with which the input signals are known to be coherent in both phase and frequency. The system also gives an estimate of the power levels of the input signals. A prototype of the system has four input channels that handle signals at a frequency of 9.5 MHz, but the basic principles of design and operation are extensible to other signal frequencies and greater numbers of channels. The prototype system consists mostly of three parts: An analog-to-digital-converter (ADC) board, which coherently digitizes the input signals in synchronism with the reference signal and performs some simple processing; A digital signal processor (DSP) in the form of a field-programmable gate array (FPGA) board, which performs most of the phase- and power-measurement computations on the digital samples generated by the ADC board; and A carrier board, which allows a personal computer to retrieve the phase and power data. The DSP contains four independent phase-only tracking loops, each of which tracks the phase of one of the preprocessed input signals relative to that of the reference signal (see figure). The phase values computed by these loops are averaged over intervals, the length of which is chosen to obtain output from the DSP at a desired rate. In addition, a simple sum of squares is computed for each channel as an estimate of the power of the signal in that channel. The relative phases and the power level estimates computed by the DSP could be used for diverse purposes in different settings. For example, if the input signals come from different elements of a phased-array antenna, the phases could be used as indications of the direction of arrival of a received signal and/or as feedback for electronic or mechanical beam steering. The power levels could be used as feedback for automatic gain control in preprocessing of incoming signals. For another example, the system could be used to measure the phases and power levels of outputs of multiple power amplifiers to enable adjustment of the amplifiers for optimal power combining.

Li, Samuel↗

Evaluation of wavelength groups for discrimination of agricultural cover types

Multispectral scanner data in twelve spectral channels, in the wavelength range 0.46 to 11.7 mm, acquired in July 1971 for three flightlines, were analyzed by applying automatic pattern recognition techniques. These twelve spectral channels were divided into four wavelength groups (W1, W2, W3 and W4), each consisting of three wavelength channels -- with respect to their estimated probability of correct classification (P sub c) in discriminating agricultural cover types. The same analysis was also done for the data acquired in August, to investigate the effect of time on these results. The effect of deletion of each of the wavelength groups on P sub C in the subsets of one to nine channels, is given. Values of P sub C for all possible combinations of wavelength groups, in the subsets of one to eleven channels are also given.

Kumar, R.↗

Discharge rates in Ma'adim Vallis, Mars

A digital elevation model (DEM) of a small part of the Martian channel Ma'adim Vallis was produced using the Frankot and Chellappa shape-from-shading algorithm. Software developed by the Dept. of Photogrammetry and Surveying at University College London uses this technique to extract slope information from the grey levels of image pixels. This technique was applied to a Viking Orbiter image of part of Ma'adim Vallis, and measurements of the channel depth and bed-slope of a channel incised into the floor of Ma'adim Vallis were made. These results were used to calculate order of magnitude estimates for discharge rates through the channel. The maximum values calculated are three orders of magnitude less than those for N. Kasei Vallis and are similar to values cited for the Missoula floods. However, when more realistic values of the water depth are used, discharge rates comparable with those for the Mississippi River result.

Thornhill, G. D.↗

Investigation of spatial misregistration effects in multispectral scanner data

The author has identified the following significant results. A model for estimating the expected proportion of multiclass pixels in a scene was generalized and extended to include misregistration effects. Another substantial effort was the development of a simulation model to generate signatures to represent the distributions of signals from misregistered multiclass pixels, based on single class signatures. Spatial misregistration causes an increase in the proportion of multiclass pixels in a scene and a decorrelation between signals in misregistered data channels. The multiclass pixel proportion estimation model indicated that this proportion is strongly dependent on the pixel perimeter and on the ratio of the total perimeter of the fields in the scene to the area of the scene. Test results indicated that expected values computed with this model were similar to empirical measurements made of this proportion in four LACIE data segments.

Nalepka, R. F.↗

Determination of the total outgoing radiance of the earth-atmosphere system

Utilizing eighty atmospheric models, the equivalent black body temperatures for the 6-7, 10-11, 15-16 and the 20-24 micron spectral regions, corresponding to the Nimbus 3 medium resolution infrared radiometer were computed. The black body temperatures for the 5-30 micron channel and the total outgoing radiances for these atmospheres were also computed. It was found that the total radiation can be estimated from the 10-11 micron channel alone with a standard error of 2.2 watts/sq m sr.

Pasternak, M.↗

Water transport by the bacterial channel alpha-hemolysin

This study is an investigation of the ability of the bacterial channel alpha-hemolysin to facilitate water permeation across biological membranes. alpha-Hemolysin channels were incorporated into rabbit erythrocyte ghosts at varying concentrations, and water permeation was induced by mixing the ghosts with hypertonic sucrose solutions. The resulting volume decrease of the ghosts was followed by time-resolved optical absorption at pH 5, 6, and 7. The average single-channel permeability coefficient of alpha-hemolysin for water ranged between 1.3x10-12 cm/s and 1.5x10-12 cm/s, depending on pH. The slightly increased single-channel permeability coefficient at lower pH-values was attributed to an increase in the effective pore size. The activation energy of water transport through the channel was low (Ea=5.4 kcal/mol), suggesting that the properties of water inside the alpha-hemolysin channel resemble those of bulk water. This conclusion was supported by calculations based on macroscopic hydrodynamic laws of laminar water flow. Using the known three-dimensional structure of the channel, the calculations accurately predicted the rate of water flow through the channel. The latter finding also indicated that water permeation data can provide a good estimate of the pore size for large channels.

Non-NASA Center↗

A Comparative Study of Co-Channel Interference Suppression Techniques

We describe three methods of combatting co-channel interference (CCI): a cross-coupled phase-locked loop (CCPLL); a phase-tracking circuit (PTC), and joint Viterbi estimation based on the maximum likelihood principle. In the case of co-channel FM-modulated voice signals, the CCPLL and PTC methods typically outperform the maximum likelihood estimators when the modulation parameters are dissimilar. However, as the modulation parameters become identical, joint Viterbi estimation provides for a more robust estimate of the co-channel signals and does not suffer as much from "signal switching" which especially plagues the CCPLL approach. Good performance for the PTC requires both dissimilar modulation parameters and a priori knowledge of the co-channel signal amplitudes. The CCPLL and joint Viterbi estimators, on the other hand, incorporate accurate amplitude estimates. In addition, application of the joint Viterbi algorithm to demodulating co-channel digital (BPSK) signals in a multipath environment is also discussed. It is shown in this case that if the interference is sufficiently small, a single trellis model is most effective in demodulating the co-channel signals.

Hamkins, Jon↗

Cost performance satellite design using queueing theory

The Poisson arrival model was used to determine the effects of limiting the number of channels for a disaster warning satellite. State probabilities and delay probabilities were estimated for several values of the number of channels (C) for arrival and service rates obtained from disaster warnings issued by the National Weather Service. The results predicted by the queueing model were compared with the results of a digital computer simulation.

Hein, G. F.↗