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At least 163 records · Page 9

A Decision Theoretic Approach To Optimizing Machine Learning Decisions with Prediction Uncertainty

While the use of machine learning (ML) classifiers is widespread, their output is often not part of any follow-on decision-making process. To illustrate, consider the scenario where we have developed and trained an ML classifier to find malicious URL links. In this scenario, network administrators must decide whether to allow a computer user to visit a particular website, or to instead block access because the site is deemed malicious. It would be very beneficial if decisions such as these could be made automatically using a trained ML classifier. Unfortunately, due to a variety of reasons discussed herein, the output from these classifiers can be uncertain, rendering downstream decisions difficult. Herein, we provide a framework for: (1) quantifying and propagating uncertainty in ML classifiers; (2) formally linking ML outputs with the decision-making process; and (3) making optimal decisions for classification under uncertainty with single or multiple objectives.

97 MATHEMATICS AND COMPUTING↗

Climate-driven deterioration of future ozone pollution in Asia predicted by machine learning with multi-source data

Ozone (O 3 ) is a secondary pollutant in the atmosphere formed by photochemical reactions that endangers human health and ecosystems. O 3 has aggravated in Asia in recent decades and will vary in the future. In this study, to quantify the impacts of future climate change on O 3 pollution, near-surface O 3 concentrations over Asia in 2020–2100 are projected using a machine learning (ML) method along with multi-source data. The ML model is trained with combined O 3 data from a global atmospheric chemical transport model and real-time observations. The ML model is then used to estimate future O 3 with meteorological fields from multi-model simulations under various climate scenarios. The near-surface O 3 concentrations are projected to increase by 5 %–20 % over South China, Southeast Asia, and South India and less than 10 % over North China and the Gangetic Plains under the high-forcing scenarios in the last decade of 21st century, compared to the first decade of 2020–2100. The O 3 increases are primarily owing to the favorable meteorological conditions for O 3 photochemical formation in most Asian regions. We also find that the summertime O 3 pollution over eastern China will expand from North China to South China and extend into the cold season in a warmer future. Our results demonstrate the important role of a climate change penalty on Asian O 3 in the future, which provides implications for environmental and climate strategies of adaptation and mitigation.

54 ENVIRONMENTAL SCIENCES↗

Reproducibility in materials informatics: lessons from ‘A general-purpose machine learning framework for predicting properties of inorganic materials’

The integration of machine learning techniques in materials discovery has become prominent in materials science research and has been accompanied by an increasing trend towards open data and open-source tools to propel the field. Despite the increasing usefulness and capabilities of these tools, developers neglecting to follow reproducible practices presents a significant barrier for other researchers looking to use or build upon their work. In this study, we investigate the challenges encountered while attempting to reproduce a section of the results presented in “A general-purpose machine learning framework for predicting properties of inorganic materials.” Our analysis identifies four major categories of challenges: (1) reporting software dependencies, (2) recording and sharing version logs, (3) sequential code organization, and (4) clarifying code references within the manuscript. The result is a proposed set of tangible action items for those aiming to make material informatics tools accessible to, and useful for the community.

36 MATERIALS SCIENCE↗

Expanding the Domain of Applicability of Machine Learning Models with Limited Data for Drug Property Prediction

Accurate machine learning models for predicting small molecule interactions with biological targets are essential for therapeutic discovery, biothreat response, and computational drug design, but their performance is often limited for understudied targets with sparse experimental data. To address this challenge, we developed and evaluated methods to improve molecular property prediction under low-data conditions, using the NimA-related kinase (NEK) family as a proof-of-concept. This work focused on two complementary goals within the ATOM Modeling PipeLine (AMPL) and the Generative Molecular Design (GMD) loop: expanding model applicability through transfer learning, representation learning, feature scaling, sampling strategies, and active-learning-inspired compound selection; and enabling efficient virtual screening to prioritize compounds that balance predicted activity, design objectives, and synthetic accessibility.

organic↗

Machine learning framework for predicting uranium enrichments from M400 CZT gamma spectra

A machine learning framework was developed for predicting uranium enrichments from M400 CZT gamma spectra. This framework leverages the availability of a large amount of measured M400 gamma spectra and uses a recently updated version of Gamma Detector Response and Analysis Software (GADRAS) for gamma spectrum analysis and generation. It also leverages the existing machine learning modules in Python for gamma spectrum data processing, curation, model training, benchmarking, and optimization of the deep machine learning models. The framework is used to develop a deep learning model to analyze gamma spectra from a set of U 3 O 8 samples with enrichments ranging from 0.31 to 93.17% and UF 6 cylinders with enrichments ranging from 0.2 to 4.95%, and the model performance is tested using a set of measured spectra and the respective declared enrichment values. Results show that the model can correctly classify 99.35% of the U 3 O 8 sample enrichments, and can predict the samples’ enrichments within an average absolute error of 0.099% (in percentage points of enrichment). For the UF 6 cylinders, the average absolute error was approximately 0.03%, with an accuracy of 98% in classifying discrete enrichment values of UF 6 samples. Finally, the results also show that the model has performed significantly better in terms of predicting enrichments in UF 6 cylinders based on measured gamma spectra than the GEM code, with a standard deviation (of the relative errors) of 2.23% (compared with the 11.51% value for the GEM code) based on results from a set of test data.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗