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At least 163 records · Page 9

AmeriFlux US-CdM Cedar Mesa

This is the AmeriFlux version of the carbon flux data for the site US-CdM Cedar Mesa. Site Description - This site is located on Cedar Mesa in the middle of Bear's Ears National Monument. The land is occasionally grazed for a few months in the spring.

Bowling, David↗

AmeriFlux FLUXNET-1F US-Var Vaira Ranch- Ione

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Var Vaira Ranch- Ione. This is the FLUXNET version of the carbon flux data for the site US-Var Vaira Ranch- Ione produced by applying the standard ONEFlux (1F) software. Site Description - Located in the lower foothills of the Sierra Nevada Mountains on privately owned land, the Vaira Ranch site is classified as a grassland dominated by C3 annual grasses. Managed by local rancher, Fran Vaira, brush has been periodically removed for cattle grazing. Species include a variety of grasses and herbs, including purple false brome, smooth cat's ear, and rose clover. Growing season is confined to the wet season only, typically from October to early May.

Ma, Siyan↗

AmeriFlux FLUXNET-1F US-Ton Tonzi Ranch

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Ton Tonzi Ranch. This is the FLUXNET version of the carbon flux data for the site US-Ton Tonzi Ranch produced by applying the standard ONEFlux (1F) software. Site Description - The Tonzi Ranch is located on the lower foothills of the Sierra Nevada Mountains. The site is classified as an oak savanna woodland (Davis et al, 2016) and is situated on privately owned land. This site is representative of the oak savanna ecosystem that rings the Great Central Valley of California and inhabits the lower reaches of the Sierra Nevada foothills. This ecosystem is a natural laboratory for studying how ecosystem scale carbon and water fluxes respond to environmental change. The temperatures range between 0 and 40 C, the autumn, winter and spring are wet and cool, while the summer growing season is hot, dry and rainless. The overstory is dominated by blue oak trees (40% of total vegetation) with intermittent grey pine trees (3 trees/ha). Understory species include a variety of grasses and herbs, including purple false brome, smooth cat's ear, and rose clover. These two distinctive layers operate in and out of phase from one another. Growing season of the understory is confined to the wet season only, typically from October to early May. In contrast, the deciduous blue oak trees are dormant and leafless during the rainy winter months. The trees tend to leaf out in March and reach maximum LAI in April. During the rainless summers, the grasses in the understory die and the leaves experience soil moisture deficit stress References Davis, F., et al. (2016). "Oak woodlands." Ecosystems of California: 509–529.

Ma, Siyan↗

AmeriFlux FLUXNET-1F US-CdM Cedar Mesa

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-CdM Cedar Mesa. This is the FLUXNET version of the carbon flux data for the site US-CdM Cedar Mesa produced by applying the standard ONEFlux (1F) software. Site Description - This site is located on Cedar Mesa in the middle of Bear's Ears National Monument. The land is occasionally grazed for a few months in the spring.

Bowling, David↗

Impact Noise Monitoring at Site 9940: RD-24 Shots

The purpose of this sampling event was to determine if the observation point (inside the MFCP) could be relocated from 74 feet away to 21 feet from ground zero and to determine how much attenuation is provided by the MFCP. The MFCP provides noise attenuation to ensure Members of the Workforce (MOW) exposure to impact noise is below the Occupational Exposure Limit (OEL) of 140 dBC. The MFCP will be used for future tests under similar configurations. Please note that during each test shot, MOW was located inside MFCP that was 74 feet from ground zero and donned hearing protection (e.g., ear plugs with a minimum noise reduction rating of 23).

42 ENGINEERING↗

Bat Acoustic Survey Data Collected June 2024 in and near Self Sufficiency Parcel-2 (SSP2) on the Oak Ridge Reservation (ORR)

The US Department of Energy (DOE) Oak Ridge Reservation (ORR) is located in Anderson and Roane Counties, Tennessee. A portion of the ORR, known as Self-Sufficiency Parcel 2 (SSP2) is planned for transfer for private use. The SSP2 Site is approximately 670 acres (Figure 1-1), although the current plan is to only clear and develop a portion of this acreage. Any inquiries about the land transfer and future development should be directed to DOE Oak Ridge Environmental Management, as this is beyond the scope of the Natural Resources Management Team (NRMT). NRMT records bat data for the entire ORR, including acoustic monitoring, mist netting and cave surveys. A few surveys have previously been conducted for small land transfers adjacent to SSP2 (See Appendix A), but not for the entire SSP2 area. Since bats have a large range, it was decided that collecting data while SSP2 was still accessible would be beneficial for the NRMT dataset. Acoustic data was therefore collected within and near SSP2 during the summer of 2024. This write-up is not a Biological Assessment (BA). However, the data and information provided can be used during the creation of a BA and consultations with US Fish and Wildlife Service (USFWS) in order to comply with federal directives of the Endangered Species Act of 1973 (16 U. S. C. 153 et seq.). The SSP2 site was surveyed during summer roosting/maternity season of 2024 using ultrasonic acoustic monitors to record calls from all bat species whose home ranges include the ORR. Special note was taken for presence of Federally listed Endangered and Threatened (T&E) bat species, as well as bat species which are Proposed for Federal listing, Candidate for federal listing, and state listed. Summer roosting season, from May 15 to August 15, is crucial to forest-dwelling T&E bat species for rearing young and foraging. Results of these surveys indicate the presence of three Federally listed bat species: Gray bat (Myotis grisescens--Endangered), Indiana bat (Myotis sodalis--Endangered), and Northern long-eared bat (Myotis septentrionalis--Endangered). Two additional bat species were present on the SSP2 Site: Tricolored bat (Perimyotis subflavus--Proposed for Federal listing) and Little brown bat (Myotis lucifugus—Candidate for Federal listing).

54 ENVIRONMENTAL SCIENCES↗

Investigation and Expression Analysis of R2R3-MYBs and Anthocyanin Biosynthesis-Related Genes during Seed Color Development of Common Bean ( Phaseolus vulgaris )

Anthocyanins are responsible for the coloration of common bean seeds, and their accumulation is positively correlated with the expression level of anthocyanin biosynthetic genes. The MBW (MYB-bHLH-WD40) complex is thought to regulate the expression of these genes, and MYB proteins, which are a key factor in activating anthocyanin pathway genes, have been identified in several plants. This study demonstrated gene structures, chromosomal placements, gene duplications of R2R3-MYBs, miRNAs associated with R2R3-MYBs, and the interaction of these genes with other flavonoid regulatory genes. qRT-PCR was used to investigate the role of specific R2R3-MYBs and flavonoid genes in common bean seed color development. As a result of a comprehensive analysis with the help of in silico tools, we identified 160 R2R3-MYB genes in the common bean genome. We divided these genes into 16 classes on the basis of their intron-exon and motif structures. Except for three, the rest of the common bean R2R3-MYB members were distributed to all chromosomes with different densities, primarily located on chromosomes 3 and 8. We identified a total of 44 duplicated gene pairs dispersed across 11 chromosomes and evolved under purifying selection (Ka/Ks < 1), 19 of which were derived from a whole-genome duplication. Our research uncovered 25 putative repressor PvMYB proteins that contain the EAR motif. Additionally, fifty different cis-regulatory elements regulated by light, stress, and hormone were identified. Within the genome of the common bean, we discovered a total of 36 microRNAs that target a total of 72 R2R3-MYB transcripts. The effect of 16 R2R3-MYB genes and 16 phenylpropanoid pathway genes, selected on the basis of their interaction in the protein-protein interaction map, playing role in the regulation of seed coat color development was evaluated using qRT-PCR in 5 different tissues at different developmental stages. The results revealed that these specific genes have different expression levels during different developmental periods, with higher levels in the pod filling and early pod stages than in the rest of the developmental periods. Furthermore, it was shown that PvTT8 (bHLH), PvTT2 (PvMYB42), PvMYB113, PvTTG1, and PvWD68 genes have effects on the regulation of seed coat color. The findings of this study, which is the first to use whole-genome analysis to identify and characterize the R2R3-MYB genes in common bean, may serve as a reference for future functional research in the legume.

59 BASIC BIOLOGICAL SCIENCES↗

National Prevalence of Caprine Prion Protein Genetic Variability at Codons 146, 211, and 222 in Goat Herds in the United States

Scrapie is a neurodegenerative disease that impacts sheep and goats, characterized by gradual and progressive changes in neurological function. Recent research shows that the scrapie incubation period is significantly influenced by specific variations in amino acids within the prion protein gene (PRNP). The objective of this study was to estimate the national prevalence of caprine PRNP genetic variability at codons 146, 211, and 222 in goat populations across the United States. A total of 3052 blood, ear tissue, and brain tissue samples were collected from goats from 50 states. The participating states were categorized into four Veterinary Service (VS) district regions. The samples underwent DNA extraction, and the PRNP variants corresponding to codons 146, 211, and 222 were amplified and sequenced. The analysis of PRNP variants, when compared to the PRNP reference sequence, revealed seven alleles in twelve genotypes. The homozygous 146NN, 211RR, and 222QQ alleles, which have been linked to an increased risk of scrapie, were found to be the most prevalent among all the goats. The heterozygous 222QK, 211RQ, 146SD, 146ND, and 146NS alleles and the homozygous 222KK, 146SS, and 146DD alleles, known to be associated with reduced scrapie susceptibility and a prolonged incubation period after experimental challenge, were found in 1.098% (222QK), 2.33% (211RQ), 0.58% (146SD), 3.13% (146ND), 20.68% (146NS), 0.005% (222KK), 3.31% (146SS), and 0.67% (146DD) of goats, respectively. The 222QK allele was found most frequently in goats tested from the east (VS District 1, 1.59%) and southwest (VS District 4, 1.08%) regions, whereas the 211RQ allele was found most often in goats tested from the Midwest (VS District 2, 8.03%) and east (VS District 1, 6.53%) regions. The 146NS allele was found most frequently in goats tested from the northwest (VS District 3, 29.02%) and southwest (VS District 4, 20.69%) regions. Our results showed that the prevalence of less susceptible genotypes at PRNP codon 146 may be sufficient to use genetic susceptibility testing in some herds. This may reduce the number of goats removed as part of a herd clean-up plan and may promote the selective breeding goats for less susceptible alleles in high-risk herds at the national level.

59 BASIC BIOLOGICAL SCIENCES↗

High-Frequency 3D Photoacoustic Computed Tomography Using an Optical Microring Resonator

3D photoacoustic computed tomography (3D-PACT) has made great advances in volumetric imaging of biological tissues, with high spatial-temporal resolutions and large penetration depth. The development of 3D-PACT requires high-performance acoustic sensors with a small size, large detection bandwidth, and high sensitivity. In this work, we present a new high-frequency 3D-PACT system that uses a microring resonator (MRR) as the acoustic sensor. The MRR sensor has a size of 80 μ m in diameter and was fabricated using the nanoimprint lithography technology. Using the MRR sensor, we have developed a transmission-mode 3D-PACT system that has achieved a detection bandwidth of ~23 MHz, an imaging depth of ~8 mm, a lateral resolution of 114 μ m, and an axial resolution of 57 μ m. We have demonstrated the 3D PACT’s performance on in vitro phantoms, ex vivo mouse brain, and in vivo mouse ear and tadpole. The MRR-based 3D-PACT system can be a promising tool for structural, functional, and molecular imaging of biological tissues at depths.

47 OTHER INSTRUMENTATION↗

Hard X-Ray Emission from the Eastern Jet of SS 433 Powering the W50 “Manatee” Nebula: Evidence for Particle Reacceleration

We present a broadband X-ray study of W50 (the “Manatee” nebula), the complex region powered by the microquasar SS 433, that provides a test bed for several important astrophysical processes. The W50 nebula, a Galactic PeVatron candidate, is classified as a supernova remnant but has an unusual double-lobed morphology likely associated with the jets from SS 433. Using NuSTAR, XMM-Newton, and Chandra observations of the inner eastern lobe of W50, we have detected hard nonthermal X-ray emission up to ~30 keV, originating from a few-arcminute-sized knotty region (“Head”) located ≲18' (29 pc for a distance of 5.5 kpc) east of SS 433, and constrained its photon index to 1.58 ± 0.05 (0.5–30 keV band). The index gradually steepens eastward out to the radio “ear” where thermal soft X-ray emission with a temperature kT ~ 0.2 keV dominates. The hard X-ray knots mark the location of acceleration sites within the jet and require an equipartition magnetic field of the order of ≳12 μG. The unusually hard spectral index from the “Head” region challenges classical particle acceleration processes and points to particle injection and reacceleration in the subrelativistic SS 433 jet, as seen in blazars and pulsar wind nebulae.

79 ASTRONOMY AND ASTROPHYSICS↗

Thermal protective visor for entering high temperature areas

Chamber observer suit visor protects the eyes and ears of the wearer while he is performing rescue operations during a fire. The visor is a simple curved sandwich of selected glass plates, gold coated polyester plastic film, and a dead air space, all mounted in an aluminum frame.

Burgett, F. A.↗