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DOE OSTI2025

Defining criteria for broadly neutralizing HIV antibodies

Over the course of a few years, a small percentage of individuals with HIV-1 develop broadly neutralizing antibodies (bnAbs) capable of neutralizing diverse viruses. Although hundreds of antibodies with neutralizing activity against heterologous viruses have been referred to as bnAbs, there is no universally accepted numerical definition of a bnAb. Here, we will review important elements of HIV neutralizing antibodies and proposed definitions of bnAbs, as well as introduce a web-based tool, CAByN (Choose Antibodies by Neutralization), allowing users to identify antibodies meeting their numerical definitions of a bnAb from data in the Los Alamos HIV Databases CATNAP (Compile, Analyze and Tally NAb Panels) antibody neutralization database. Biological findings from use of CAByN are also presented here, including differential neutralizing activity for certain antibodies across viral clades, and identification of antibodies with suspected incomplete neutralization. Website address: http://hiv.lanl.gov/content/sequence/CABYN/CABYN.html.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2020

Standardized Architecture for a Mega-Biobank Phenomic Library: The Million Veteran Program (MVP)

Electronic health records (EHRs) provide a wealth of data for phenotype development in population health studies, and researchers invest considerable time to curate data elements and validate disease definitions. The ability to reproduce well-defined phenotypes increases data quality, comparability of results and expedites research. In this paper, we present a standardized approach to organize and capture phenotype definitions, resulting in the creation of an open, online repository of phenotypes. This resource captures phenotype development, provenance and process from the Million Veteran Program, a national mega-biobank embedded in the Veterans Health Administration (VHA). To ensure that the repository is searchable, extendable, and sustainable, it is necessary to develop both a proper digital catalog architecture and underlying metadata infrastructure to enable effective management of the data fields required to define each phenotype. Our methods provide a resource for VHA investigators and a roadmap for researchers interested in standardizing their phenotype definitions to increase portability.

Knight, Kathryn↗

DOE OSTI2021

Solar PV Curtailment in Changing Grid and Technological Contexts: Preprint

Solar photovoltaic (PV) systems generate electricity with no marginal costs or emissions. As a result, PV output is almost always prioritized over other fuel sources and delivered to the electric grid. At increasing levels of PV penetration situations arise where PV is curtailed, either because of local supply/demand imbalances or to maintain system flexibility. In 2018, we estimate that about 6.5 million MWh of PV output was curtailed in four key countries: Chile, China, Germany, and the United States. We find that PV curtailment peaks in the spring and fall, when PV output is relatively high but electricity demand is relatively low. Similar to the case of wind, some PV curtailment is attributable to limited transmission capacity connecting sparsely populated solar-heavy regions to load centers.Grid policies generally seek to minimize curtailment because it is viewed as an economic and environmental loss. However, we argue that changing grid and technological contexts warrant new thinking on PV curtailment. In the grid context, as grids integrate more PV and other renewable energy generation, seeking an optimal level of accepted curtailment becomes more efficient than preventing it. In the technological context, emerging technologies such as advanced inverters and low-cost battery storage are making PV systems more flexible. With flexible PV, grid operators can use withheld PV output to provide various non-generation grid services. This withheld PV output is a form of curtailment under prevailing definitions of the term. Hence, policies that aim to minimize curtailment may undercut the ability of grid operators to fully use the emerging capabilities of flexible PV systems. We argue that the changing grid and technological contexts require a re-examination of the curtailment paradigm. We argue that PV output that is withheld to provide grid services is fundamentally different from output that goes unused in response to system constraints. As a result, we propose a more exclusive definition of curtailment as unused PV output rather than the more expansive conventional definition as any reduction in system output from its technical potential. The terminological distinction is more than a question of semantics. Facilitating grid services by withholding PV output may increase the potential value of flexible PV systems to the grid. This shift in thinking may allow grid operators and policymakers to think in terms of PV curtailment management rather than minimization. Effective curtailment management may include policies that increase PV system dispatchability, alternative PV compensation schemes that decouple generator revenue from system output, and policies to increase grid flexibility.

Chile↗

DOE OSTI2020

Standardized Architecture for a Mega-Biobank Phenomic Library: The Million Veteran Program (MVP)

Knight, Kathryn↗

DOE OSTI2022

Waste Reduction Network Waste Glossary

This document contains relevant industry definitions to support partners in the Better Buildings, Better Plants Waste Reduction Network. Definitions were compiled using the CalRecycle Glossary, SWANA’s Waste Glossary, the U.S. Environmental Protection Agency, the State of Washington’s Department of Ecology, the Ellen MacArthur Foundation, and Metro Oregon. Some terms contain multiple complementary definitions.

Better Buildings, waste glossary, compost, waste d↗

DOE OSTI2022

A universal method to compare parts from STEP files

Abstract Model Based Definition (MBD) captures the complete specification of a part in digital form and leverages (at least) the universal “Standard for the Exchange of Product” (STEP) file format. MBD has revolutionized manufacturing due to time and cost savings associated with containing all engineering data within a single digital source. This work presents a novel method to transform digital definitions in any given STEP file into a tensor-like structure that is unique for each part and can be used to regenerate the original STEP file completely. Resulting STEP tensors are amenable to part comparison based on various part specifications in a general and straightforward manner. Here, part similarity is evaluated among sets of parts according to specific geometry, material composition, and design intent. Importantly, specification similarity can be quantified using only the tensors’ structure. As such, this approach is not limited to families of geometric shapes, part types, or fabrication methods; nor does it require any prior knowledge about the parts being compared.

36 MATERIALS SCIENCE↗

DOE OSTI2024

Non-conservation and conservation for different formulations of moist potential vorticity

Potential vorticity (PV) is one of the most important quantities in atmospheric science. In the absence of dissipative processes, the PV of each fluid parcel is known to be conserved, for a dry atmosphere. However, a parcel's PV is not conserved if clouds or phase changes of water occur. Recently, PV conservation laws were derived for a cloudy atmosphere, where each parcel's PV is not conserved but parcel-integrated PV is conserved, for integrals over certain volumes that move with the flow. Hence a variety of different statements are now possible for moist PV conservation and non-conservation, and in comparison to the case of a dry atmosphere, the situation for moist PV is more complex. Here, in light of this complexity, several different definitions of moist PV are compared for a cloudy atmosphere. Numerical simulations are shown for a rising thermal, both before and after the formation of a cloud. These simulations include the first computational illustration of the parcel-integrated, moist PV conservation laws. The comparisons, both theoretical and numerical, serve to clarify and highlight the different statements of conservation and non-conservation that arise for different definitions of moist PV.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2020

Solar cell efficiency tables (version 57)

Abstract Consolidated tables showing an extensive listing of the highest independently confirmed efficiencies for solar cells and modules are presented. Guidelines for inclusion of results into these tables are outlined, and new entries since June 2020 are reviewed. In this issue, charts showing efficiency improvements since 1993 are included as well as cell and module area definitions and an updated list of recognized test centres.

Green, Martin↗

DOE OSTI2021

Standards development for modules in high temperature micro-environments

Photovoltaic (PV) module qualification standards, IEC 61215 and IEC 61730, were designed to apply to “general open-air climates” and IEC 61730 specifically indicated applicability of ambient air temperature of 40°C. Additionally, these standards provided allowances for so-called “open rack mounted PV modules” without a clear definition of “open-rack.” These implied restrictions and allowances meant that hotter climates or thermally restrictive installation methods may not be covered by these often customer-mandated certification standards. This is particularly salient for the significant growth regions of the Middle East and India that would be expected to operate at significantly higher temperatures. The applicability of these documents raised issues over the definition of “open rack” and the fact that the geographic location is just as important as the mounting configuration in assessing the impact of the micro-environment of a PV module. This work summarizes the scientific background for IEC Technical Specification 63126:2020 ED1, titled “Guidelines for qualifying PV modules components and materials for operation at high temperatures.” This standard was recently published by the IEC and is the first step in a systematic effort to rework these standards to address the question of temperature more directly. Instead of specifying a mounting condition, we specify different suites of tests suitable for a system (PV module, mounting style, and location) defined by the 98th percentile cell temperature. With a defined temperature regime to work from, this allowed us to use existing literature research combined with additional modeling work to determine, which tests would need to be modified. This resulted in suggested changes to material thermal indices, thermal cycling temperatures, hot spot testing, ultraviolet testing, and bypass diode testing among other tests and characteristics described in this study.

14 SOLAR ENERGY↗

DOE OSTI2021

Global Optimization of Chemical Cluster Structures: Methods, Applications, and Challenges

Chemical clusters are relevant to many applications in catalysis, separations, materials, and energy sciences. Experimentally, the structure of clusters is difficult to determine, but it is very important in understanding their chemistry and properties. Computational methods can be used to examine cluster structure, however finding the most stable structure is not simple, particularly as the cluster size increases. Global optimization techniques have long been used to tackle the problem of the most stable structure, but such approaches would have to look for a global minimum, while sampling local minima over the whole potential energy surface as well. In this review, the state-of-the-art theory of global optimization theory is summarized. First, the definition, significance, relation to experiments, and a brief history of global optimization is presented. We then discuss, in more detail, three versatile global optimization methods: the basin hopping, the artificial bee colony algorithm, and the genetic algorithm. We close with some representative application examples of global optimization of clusters since 2016 and the challenges, open questions and opportunities in this field.

Global optimization, Chemical clusters, Artificial↗

DOE OSTI2023

Perspective: Performance Loss Rate in Photovoltaic Systems

Photovoltaic systems may underperform expectations for several reasons, including inaccurate initial estimates, suboptimal operations and maintenance, or component degradation. Accurate assessment of these loss factors aids in addressing root causes of underperformance and in realizing accurate expectations and models. The performance loss rate (PLR) is a commonly cited high‐level metric for the change in system output over time, but there is no precise, standard definition. Herein, an annualized definition of PLR that is inclusive of all loss factors and that can capture nonlinear changes to performance over time is proposed. The importance of distinguishing between recoverable and nonrecoverable losses which underly PLR is highlighted.

14 SOLAR ENERGY↗

DOE OSTI2024

Flavor fragmentation function factorization

A definition of partonic jet flavor that is both theoretically well-defined and experimentally robust would have profound implications for measurements and predictions especially for heavy flavor applications. Recently, a definition of jet flavor was introduced as the net flavor flowing along the direction of the Winner-Take-All axis of a jet which is soft safe to all orders, but not collinear safe. Here, we exploit the lack of collinear safety and propose a factorization theorem of perturbative flavor fragmentation functions that resum collinear divergences and describe the evolution of flavor from the short distance of jet production to the long distance at which hadronization occurs. Collinear flavor evolution is governed by a small modification of the DGLAP equations. We present a detailed all-orders analysis and identify exact relations that must hold amongst the various anomalous dimensions by probability conservation and the existence of fixed points of the renormalization group flow. We explicitly validate the factorization theorem at one-loop order, and demonstrate its consistency at two loops in particular flavor channels. Starting at two-loops, constraints on phase space imposed by flavor measurements potentially allow for non-trivial soft contributions, but we demonstrate that they are scaleless and so explicitly vanish, ensuring that soft particles are summed inclusively and all divergences are exclusively collinear in nature. This factorization theorem opens the door to precision calculations with identified flavor in the infrared.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2022

Nonperturbative negative geometries: amplitudes at strong coupling and the amplituhedron

The amplituhedron determines scattering amplitudes in planar N = 4 super Yang-Mills by a single “positive geometry” in the space of kinematic and loop variables. We study a closely related definition of the amplituhedron for the simplest case of four-particle scattering, given as a sum over complementary “negative geometries”, which provides a natural geometric understanding of the exponentiation of infrared (IR) divergences, as well as a new geometric definition of an IR finite observable F(g, z) — dually interpreted as the expectation value of the null polygonal Wilson loop with a single Lagrangian insertion — which is directly determined by these negative geometries. This provides a long-sought direct link between canonical forms for positive (negative) geometries, and a completely IR finite post-loop-integration observable depending on a single kinematical variable z, from which the cusp anomalous dimension Γ cusp (g) can also be straightforwardly obtained. We study an especially simple class of negative geometries at all loop orders, associated with a “tree” structure in the negativity conditions, for which the contributions to F(g, z) and Γ cusp can easily be determined by an interesting non-linear differential equation immediately following from the combinatorics of negative geometries. This lets us compute these “tree” contributions to F(g, z) and Γ cusp for all values of the ‘t Hooft coupling. The result for Γ cusp remarkably shares all main qualitative characteristics of the known exact results obtained using integrability.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2020

Sign flip triangulations of the amplituhedron

We present new triangulations of the m = 4 amplituhedron relevant for scattering amplitudes in planar N = 4 super-Yang-Mills, obtained directly from the combinatorial definition of the geometry. Using the “sign flip” characterization of the amplituhedron, we reproduce the canonical forms for the all-multiplicity next-tomaximally helicity violating (NMHV) and next-to-next-to-maximally helicity violating (N2MHV) tree-level as well as the NMHV one-loop cases, without using any input from traditional amplitudes methods. Our results provide strong evidence for the equivalence of the original definition of the amplituhedron [1] and the topological one [2], and suggest a new path forward for computing higher loop amplitudes geometrically. In particular, we realize the NMHV one-loop amplituhedron as the intersection of two amplituhedra of lower dimensionality, which is reflected in the novel structure of the corresponding canonical form.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

DOE OSTI2020

The hidden geometry of particle collisions

We establish that many fundamental concepts and techniques in quantum field theory and collider physics can be naturally understood and unified through a simple new geometric language. The idea is to equip the space of collider events with a metric, from which other geometric objects can be rigorously defined. Our analysis is based on the energy mover’s distance, which quantifies the “work” required to rearrange one event into another. This metric, which operates purely at the level of observable energy flow information, allows for a clarified definition of infrared and collinear safety and related concepts. A number of well-known collider observables can be exactly cast as the minimum distance between an event and various manifolds in this space. Jet definitions, such as exclusive cone and sequential recombination algorithms, can be directly derived by finding the closest few-particle approximation to the event. Several area- and constituent-based pileup mitigation strategies are naturally expressed in this formalism as well. Finally, we lift our reasoning to develop a precise distance between theories, which are treated as collections of events weighted by cross sections. In all of these various cases, a better understanding of existing methods in our geometric language suggests interesting new ideas and generalizations.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2024

Algebraic ER=EPR and complexity transfer

We propose an algebraic definition of ER=EPR in the G N → 0 limit, which associates bulk spacetime connectivity/disconnectivity to the operator algebraic structure of a quantum gravity system. The new formulation not only includes information on the amount of entanglement, but also more importantly the structure of entanglement. We give an independent definition of a quantum wormhole as part of the proposal. This algebraic version of ER=EPR sheds light on a recent puzzle regarding spacetime disconnectivity in holographic systems with $\mathcal{O}$(1/G N ) entanglement. We discuss the emergence of quantum connectivity in the context of black hole evaporation and further argue that at the Page time, the black hole-radiation system undergoes a transition involving the transfer of an emergent type III 1 subalgebra of high complexity operators from the black hole to radiation. We argue this is a general phenomenon that occurs whenever there is an exchange of dominance between two competing quantum extremal surfaces.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2023

Tree-level Unitarity in $$ \textrm{SU}{(2)}_L\times \textrm{U}{(1)}_Y\times \textrm{U}{(1)}_{Y^{\prime }} $$ Models

Abstract In models with a U(1) gauge extension beyond the Standard Model, one can derive sum rules for the couplings of the theory that are a consequence of tree-level unitarity. In this paper, we provide a comprehensive list of coupling sum rules for a general$$ \textrm{SU}{(2)}_L\times \textrm{U}{(1)}_Y\times \textrm{U}{(1)}_{Y^{\prime }} $$ SU 2 L × U 1 Y × U 1 Y ′ gauge theory coupled to an arbitrary set of fermion and scalar multiplets. These results are of particular interest for models of dark matter that employ an extended gauge sector mediated by a new (dark)Z ′ gauge boson. For the case of a minimal extension of the Standard Model with a$$ \textrm{U}{(1)}_{Y^{\prime }} $$ U 1 Y ′ gauge boson, we clarify the definitions of the weak mixing angle and the electroweakρparameter. We demonstrate the utility of a generalizedρparameter (denoted byρ ′ ) whose definition naturally follows from the unitarity sum rules developed in this paper.

Physics↗

DOE OSTI2022

Unconventional lignin monomers—Extension of the lignin paradigm

Lignin is largely produced by the oxidative radical coupling of the three monolignols, pcoumaryl, coniferyl, and sinapyl alcohols, which form the p-hydroxyphenyl, guaiacyl, and syringyl lignin units in the lignin polymer. However, it is increasingly appreciated that other “unconventional” phenolic compounds can also behave as lignin monomers participating in oxidative radical reactions during the lignification process and being also integrated into the lignin polymer in some plants. Various phenolic compounds have been found incorporated into the lignin, including phenolic compounds derived from the monolignol biosynthetic pathway (e.g., monolignol ester conjugates, caffeyl and 5-hydroxyconiferyl alcohols, hydroxycinnamaldehydes, among others). More fascinating still was the discovery in some plants of a series of phenolic compounds arising from other polyphenolic biosynthetic pathways, including flavonoids (tricin, dihydrotricin, naringenin, naringenin chalcone), hydroxystilbenes (resveratrol, piceatannol, and isorhapontigenin, and their O-glucosylated counterparts piceid, astringin, and isorhapontin), and ferulic acid amides (feruloyltyramine, and diferuloylputrescine), that are integrated into the lignin polymer. All of these discoveries indicate that the lignin structure is far more complex than previously thought, that the definition of lignin should not be restricted to a polymer derived solely from the three traditional monolignols, and that other unconventional lignin monomers must be considered, thus expanding the established definition of lignin. Here, the overriding factor remains, however, that lignification, the process of polymerization to the lignin polymer, allows this compositional flexibility because it is a simple chemical process.

59 BASIC BIOLOGICAL SCIENCES↗