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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,603 records · Page 89

Telomere-to-telomere assemblies of chromosome 10 reveal complex adaptive variation of 3-ketoacyl-CoA-synthases in Populus trichocarpa likely driven by Helitrons

The model woody plant Populus trichocarpa displays an atypical alkene-diverse wax cuticle likely driven by copy number variation (CNV) of 3-ketoacyl-CoA synthases ( KCS ), which has been difficult to confirm with short-read assemblies. Long-read sequencing enables the development of telomere-to-telomere resources to detect cryptic variation, including CNVs, which are currently missed. Integrating this information can improve genomic prediction for breeding and provide insights into the evolutionary basis of important traits. Our analysis of 78 long-read haplotypes from chromosome 10 identified more than twice as many KCS genes as previously reported, and numerous intragenic non-synonymous substitutions. Random Forest predictive models highlighted the importance of Potri.010G079500 in producing very long chain alkenes; however, its absence did not predict previously reported alkene-deficient phenotypes. Instead, alkene levels are best predicted by the combinations of KCS copies. Additionally, amino acid substitutions clustered around ligand and donor binding pockets, suggesting they contribute to differing wax cuticle composition. Finally, each KCS gene and copy was linked to a Helitron transposon. A phylogenetic analysis suggests Helitrons are the evolutionary mechanism for generating KCS tandem arrays. Long-read generated telomere-to-telomere assemblies of P. trichocarpa chromosome 10 revealed large-effect loci critical to genetic studies that are unattainable from short-reads. This new resource produced novel insights into genome structure and function, and a novel mechanism for generating tandem gene duplication. Our results highlight that, given current challenges in annotation and assembly, detailed and focused long-read sequences are key to interpreting complex genomic regions that contain tandem copy number variants.

09 BIOMASS FUELS↗

Canopy structure modulates the sensitivity of subalpine forest stands to interannual snowpack and precipitation variability

A declining spring snowpack is expected to have widespread effects on montane and subalpine forests in western North America and across the globe. The way that tree water demands respond to this change will have important impacts on forest health and downstream water subsidies. Here, we present data from a network of sap velocity sensors and xylem water isotope measurements from three common tree species (Picea engelmannii, Abies lasiocarpa and Populus tremuloides) across a hillslope transect in a subalpine watershed in the Upper Colorado River basin. We use these data to compare tree- and stand-level responses to the historically high spring snowpack but low summer rainfall of 2019 against the low spring snowpack but high summer rainfall amounts of 2021 and 2022. From the sap velocity data, we found that only 40 % of the trees showed an increase in cumulative transpiration in response to the large snowpack year (2019), illustrating the absence of a common response to interannual spring snowpack variability. The trees that increased water use during the year with the large spring snowpack were all found in dense canopy stands – irrespective of species – while trees in open-canopy stands were more reliant on summer rains and, thus, more active during the years with modest snow and higher summer rain amounts. Using the sap velocity data along with supporting measurements of soil moisture and snow depth, we propose three mechanisms that lead to stand density modulating the tree-level response to changing seasonality of precipitation: Topographically mediated convergence zones have consistent access to recharge from snowmelt which supports denser stands with high water demands that are more reliant and sensitive to changing snow. Interception of summer rain in dense stands reduces the throughfall of summer rain to surface soils, limiting the sensitivity of the dense stands to changes in summer rain. Shading in dense stands allows the snowpack to persist deeper into the growing season, providing high local reliance on snow during the fore-summer (early-summer) drought period. Combining data generated from natural gradients in stand density, like this experiment, with results from controlled forest-thinning experiments can be used to develop a better understanding of the responses of forested ecosystems to futures with reduced spring snowpack.

54 ENVIRONMENTAL SCIENCES↗

Proceedings of the UT-GOM2-2 Hydrate Pressure Coring Expedition

In the summer and fall of 2023, the University of Texas (UT) Deepwater Hydrate Coring Expedition (UT-GOM2-2) drilled, cored, made downhole measurements, and analyzed samples from the seafloor to the base of the gas hydrate stability zone at Site H, in the Walker Ridge Protracted Area Block 313 (Site H, WR313), in the Terrebonne Basin, deepwater Gulf of America (Gulf of Mexico).

03 NATURAL GAS↗

Comparisons of triple-differential cross sections for quasielastic-like $ν_μ$-hydrocarbon interactions using $\langle E_ν\rangle \sim$ 3~GeV versus $\sim$ 6~GeV beams in MINERvA

Neutrino charged-current quasielastic-like scattering, a reaction category extensively used in neutrino oscillation measurements, receives contributions from single nucleon knockout processes, multinucleon processes, and inelastic scattering with subsequent rescattering or absorption in the nucleus to produce only nucleons in the final state. In this article, comparisons are presented of the same measurement in two different wideband neutrino beams: one beam peaks near 3 GeV with few neutrinos above 6 GeV; the other peaks near 6 GeV with few neutrinos above 10 GeV. Comparisons of differential cross sections in muon and proton kinematics for these two exposures probe deviations from free-neutron scattering that arise from the processes involving the nuclear medium, and provide a test of neutrino interaction models used to infer neutrino energies in oscillation experiments. Discrepancies are observed between the data and predictions that point to overestimates of the final state interactions of both protons and charged pions in quasielastic-like events.

Ruterbories, D. [Rochester U.]↗

Effects of Minor Alloying Elements and Impurities on Long-Range Ordering in Ni-Cr-Based Alloys

There is growing concern about long-range ordered Ni2Cr phase forming during thermal aging of Ni-Cr-based alloys (e.g., 690, 625), which leads to lattice contraction, hardening, and embrittlement, possibly limiting the service life of light water reactor components. The timespan when this phase transformation occurs can vary in orders of magnitude between model and commercial alloys and is likely related to the presence of major (e.g., Fe, Mo) and minor alloying elements (e.g., Ti, Si, Nb). These minor alloying elements have been hypothesized to bind with vacancies and therefore limit diffusion. Contrarily, impurities (e.g., P, S) are believed to enhance vacancy diffusion and accelerate the Ni2Cr phase transformation because of a vacancy drag mechanism. This study implements experimental isothermal aging of model Ni-Cr binary and Ni-Cr-X ternary alloys, where X is Ti, Si, Nb, and P to help understand how each minor alloying element affects the Ni2Cr phase transformation timeline. Synchrotron-based X-ray diffraction and hardness measurements are used to quantify the evolution of the Ni2Cr phase transformation through a variety of short aging times to identify the onset of long-range order. These experimental results are compared to first principles simulations from literature to understand the mechanism by which each element impacts vacancy diffusion and the formation of the long-range ordered phase, Ni2Cr.

36 - MATERIALS SCIENCE↗