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At least 1,603 records · Page 89

Observation of inverse Compton emission from a long γ-ray burst

Long-duration γ-ray bursts (GRBs) originate from ultra-relativistic jets launched from the collapsing cores of dying massive stars. They are characterized by an initial phase of bright and highly variable radiation in the kiloelectronvolt-to-megaelectronvolt band, which is probably produced within the jet and lasts from milliseconds to minutes, known as the prompt emission. Subsequently, the interaction of the jet with the surrounding medium generates shock waves that are responsible for the afterglow emission, which lasts from days to months and occurs over a broad energy range from the radio to the gigaelectronvolt bands. The afterglow emission is generally well explained as synchrotron radiation emitted by electrons accelerated by the external shock. Recently, intense long-lasting emission between 0.2 and 1 teraelectronvolts was observed from GRB 190114C. Here we report multi-frequency observations of GRB 190114C, and study the evolution in time of the GRB emission across 17 orders of magnitude in energy, from 5 × 10 -6 to 10 12 electronvolts. We find that the broadband spectral energy distribution is double-peaked, with the teraelectronvolt emission constituting a distinct spectral component with power comparable to the synchrotron component. This component is associated with the afterglow and is satisfactorily explained by inverse Compton up-scattering of synchrotron photons by high-energy electrons. Finally, we find that the conditions required to account for the observed teraelectronvolt component are typical for GRBs, supporting the possibility that inverse Compton emission is commonly produced in GRBs.

79 ASTRONOMY AND ASTROPHYSICS↗

Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

The genus Oryza is a model system for the study of molecular evolution over time scales ranging from a few thousand to 15 million years. Using 13 reference genomes spanning the Oryza species tree, we show that despite few large-scale chromosomal rearrangements rapid species diversification is mirrored by lineage-specific emergence and turnover of many novel elements, including transposons, and potential new coding and noncoding genes. Our study resolves controversial areas of the Oryza phylogeny, showing a complex history of introgression among different chromosomes in the young ‘AA’ subclade containing the two domesticated species. This study highlights the prevalence of functionally coupled disease resistance genes and identifies many new haplotypes of potential use for future crop protection. Finally, this study marks a milestone in modern rice research with the release of a complete long-read assembly of IR 8 ‘Miracle Rice’, which relieved famine and drove the Green Revolution in Asia 50 years ago.

59 BASIC BIOLOGICAL SCIENCES↗

Lineshape characterization of excitons in monolayer WS 2 by two-dimensional electronic spectroscopy

The optical properties of monolayer transition metal dichalcogenides (TMDCs), an important family of two-dimensional (2D) semiconductors for optoelectronic applications, are dominated by two excitons A (XA) and B (XB) located at K/K's valleys. The lineshape of the excitons is an indicator of the interaction of the excitons with other particles and also largely determines the performance of TMDC-based optoelectronic devices. In this work, we apply 2D electronic spectroscopy (2DES), which enables separation of the intrinsic homogeneous linewidth and the extrinsic inhomogeneous linewidth, to dissect the lineshape of XA in monolayer WS 2 . With a home-built broadband optical parametric amplifier, the 2D spectra give the exciton linewidth values for extensive ranges of excitation densities and temperatures, reflecting inter-exciton and exciton–phonon interactions. Meanwhile, the time-domain evolution of the lineshape reveals a similar rate of spectral diffusion to that in quantum wells (QWs) based on III–V semiconductors.

36 MATERIALS SCIENCE↗

Interpreting anomalies observed in oxide semiconductor TFTs under negative and positive bias stress

Oxide semiconductor thin-film transistors can show anomalous behavior under bias stress. Two types of anomalies are discussed in this paper. The first is the shift in threshold voltage (V{sub TH}) in a direction opposite to the applied bias stress, and highly dependent on gate dielectric material. We attribute this to charge trapping/detrapping and charge migration within the gate dielectric. We emphasize the fundamental difference between trapping/detrapping events occurring at the semiconductor/dielectric interface and those occurring at gate/dielectric interface, and show that charge migration is essential to explain the first anomaly. We model charge migration in terms of the non-instantaneous polarization density. The second type of anomaly is negative V{sub TH} shift under high positive bias stress, with logarithmic evolution in time. This can be argued as electron-donating reactions involving H{sub 2}O molecules or derived species, with a reaction rate exponentially accelerated by positive gate bias and exponentially decreased by the number of reactions already occurred.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Deceleration-stage Rayleigh–Taylor growth in a background magnetic field studied in cylindrical and Cartesian geometries

Experiments have identified the Rayleigh–Taylor (RT) instability as one of the greatest obstacles to achieving inertial confinement fusion. Consequently, mitigation strategies to reduce RT growth and fuel–ablator mixing in the hotspot during the deceleration phase of the implosion are of great interest. In this work, the effect of seed magnetic fields on deceleration-phase RT growth are studied in planar and cylindrical geometries under conditions relevant to the National Ignition Facility (NIF) and Omega experiments. The magnetohydrodynamic (MHD) and resistive-MHD capabilities of the FLASH code are used to model imploding cylinders and planar blast-wave-driven targets. Realistic target and laser parameters are presented that suggest the occurrence of morphological differences in late-time RT evolution in the cylindrical NIF case and a measurable difference in spike height of single-mode growth in the planar NIF case. The results of this study indicate the need for target designs to utilize an RT-unstable foam–foam interface in order to achieve sufficient magnetic field amplification to alter RT evolution. Benchmarked FLASH simulations are used to study these magnetic field effects in both resistive and ideal MHD.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

NBI optimization on SMART and implications for scenario development

Abstract The SMall Aspect Ratio Tokamak (SMART) under commissioning at the University of Seville, Spain, aims to explore confinement properties and possible advantages in confinement for compact/spherical tokamaks operating at negative vs. positive triangularity. This work explores the benefits of auxiliary heating through Neutral Beam Injection (NBI) for SMART scenarios beyond the initial Ohmic phase of operations, in support of the device’s mission. Expected values of electron and ion temperature achievable with NBI heating are first predicted for the current flat-top phase, including modeling to optimize the NBI injection geometry to maximize NBI absorption and minimize losses for a given equilibrium. Simulations are then extended for a selected case to cover the current ramp-up phase. Differences with results obtained for the flat-top phase indicate the importance of determining the plasma evolution over time, as well as self-consistently determining the edge plasma parameters for reliable time-dependent simulations. Initial simulation results indicate the advantage of auxiliary NBI heating to achieve nearly double values of pressure and stored energy compared to Ohmic discharges, thus significantly increasing the device’s performance. The scenarios developed in this work will also contribute to diagnostic development and optimization for SMART, as well as providing test cases for initial predictions of macro- and micro-instabilities.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Jamming and Tiling in Aggregation of Rectangles

We study a random aggregation process involving rectangular clusters. In each aggregation event, two rectangles are chosen at random and if they have a compatible side, either vertical or horizontal, they merge along that side to form a larger rectangle. Starting with N identical squares, this elementary event is repeated until the system reaches a jammed state where each rectangle has two unique sides. The average number of frozen rectangles scales as N α in the large-N limit. The growth exponent α = 0.229 ± 0.002 characterizes statistical properties of the jammed state and the time-dependent evolution. We also study an aggregation process where rectangles are embedded in a plane and interact only with nearest neighbors. In the jammed state, neighboring rectangles are incompatible, and these frozen rectangles form a tiling of the two-dimensional domain. Here in this case, the final number of rectangles scales linearly with system size.

97 MATHEMATICS AND COMPUTING↗

Solving Newton’s equations of motion with large timesteps using recurrent neural networks based operators

Classical molecular dynamics simulations are based on solving Newton’s equations of motion. Using a small timestep, numerical integrators such as Verlet generate trajectories of particles as solutions to Newton’s equations. We introduce operators derived using recurrent neural networks that accurately solve Newton’s equations utilizing sequences of past trajectory data, and produce energy-conserving dynamics of particles using timesteps up to 4000 times larger compared to the Verlet timestep. We demonstrate significant speedup in many example problems including 3D systems of up to 16 particles.

Newton’s equations↗

A Unified Resource for Tracking Anti-CRISPR Names

In the battle between CRISPR-Cas* prokaryotic immune systems and the elements that they target, a diverse array of “anti-CRISPR” proteins have evolved. These proteins appear to have arisen independently multiple times in evolution and function through diverse mechanisms to inhibit CRISPR-Cas immunity. For comprehensive reviews on anti-CRISPRs, we direct readers to recent publications.

59 BASIC BIOLOGICAL SCIENCES↗

Complex Evolutionary History of Translation Elongation Factor 2 and Diphthamide Biosynthesis in Archaea and Parabasalids

Diphthamide is a modified histidine residue which is uniquely present in archaeal and eukaryotic elongation factor 2 (EF-2), an essential GTPase responsible for catalyzing the coordinated translocation of tRNA and mRNA through the ribosome. In part due to the role of diphthamide in maintaining translational fidelity, it was previously assumed that diphthamide biosynthesis genes (dph) are conserved across all eukaryotes and archaea. Here, comparative analysis of new and existing genomes reveals that some archaea (i.e., members of the Asgard superphylum, Geoarchaea, and Korarchaeota) and eukaryotes (i.e., parabasalids) lack dph. In addition, while EF-2 was thought to exist as a single copy in archaea, many of these dph-lacking archaeal genomes encode a second EF-2 paralog missing key residues required for diphthamide modification and for normal translocase function, perhaps suggesting functional divergence linked to loss of diphthamide biosynthesis. Interestingly, some Heimdallarchaeota previously suggested to be most closely related to the eukaryotic ancestor maintain dph genes and a single gene encoding canonical EF-2. Our findings reveal that the ability to produce diphthamide, once thought to be a universal feature in archaea and eukaryotes, has been lost multiple times during evolution, and suggest that anticipated compensatory mechanisms evolved independently.

59 BASIC BIOLOGICAL SCIENCES↗

A framework to measure the properties of intergalactic metal systems with two-point flux statistics

ABSTRACT The abundance, temperature, and clustering of metals in the intergalactic medium are important parameters for understanding their cosmic evolution and quantifying their impact on cosmological analysis with the Ly α forest. The properties of these systems are typically measured from individual quasar spectra redward of the quasar’s Ly α emission line, yet that approach may provide biased results due to selection effects. We present an alternative approach to measure these properties in an unbiased manner with the two-point statistics commonly employed to quantify large-scale structure. Our model treats the observed flux of a large sample of quasar spectra as a continuous field and describes the one-dimensional, two-point statistics of this field with three parameters per ion: the abundance (column density distribution), temperature (Doppler parameter), and clustering (cloud–cloud correlation function). We demonstrate this approach on multiple ions (e.g. ${\rm C\, \small {\rm IV}}$ , ${\rm Si\, \small {\rm IV}}$ , and ${\rm Mg\, \small {\rm II}}$ ) with early data from the Dark Energy Spectroscopic Instrument (DESI) and high-resolution spectra from the literature. Our initial results show some evidence that the ${\rm C\, \small {\rm IV}}$ abundance is higher than previous measurements and evidence for abundance evolution over time. The first full year of DESI observations will have over an order of magnitude more quasar spectra than this study. In a future paper, we will use those data to measure the growth of clustering and its impact on the Ly α forest, as well as test other DESI analysis infrastructure such as the pipeline noise estimates and the resolution matrix.

79 ASTRONOMY AND ASTROPHYSICS↗

A matched-filter approach to radio variability and transients: searching for orphan afterglows in the VAST Pilot Survey

Radio transient searches using traditional variability metrics struggle to recover sources whose evolution time-scale is significantly longer than the survey cadence. Motivated by the recent observations of slowly evolving radio afterglows at gigahertz frequency, we present the results of a search for radio variables and transients using an alternative matched-filter approach. We designed our matched-filter to recover sources with radio light curves that have a high-significance fit to power-law and smoothly broken power-law functions; light curves following these functions are characteristic of synchrotron transients, including ‘orphan’ gamma-ray burst afterglows, which were the primary targets of our search. Applying this matched-filter approach to data from Variables and Slow Transients Pilot Survey conducted using the Australian SKA Pathfinder, we produced five candidates in our search. Subsequent Australia Telescope Compact Array observations and analysis revealed that: one is likely a synchrotron transient; one is likely a flaring active galactic nucleus, exhibiting a flat-to-steep spectral transition over 4 months; one is associated with a starburst galaxy, with the radio emission originating from either star formation or an underlying slowly evolving transient; and the remaining two are likely extrinsic variables caused by interstellar scintillation. The synchrotron transient, VAST J175036.1–181454, has a multifrequency light curve, peak spectral luminosity, and volumetric rate that is consistent with both an off-axis afterglow and an off-axis tidal disruption event; interpreted as an off-axis afterglow would imply an average inverse beaming factor $\langle f^{-1}_{\text{b}} \rangle = 860^{+1980}_{-710}$, or equivalently, an average jet opening angle of $\langle \theta _{\textrm {j}} \rangle = 3^{+4}_{-1}\,$ deg.

79 ASTRONOMY AND ASTROPHYSICS↗

Origin and limit of the recovery of damaged information by time reversal

Recently it was found that scrambled information can be partially recovered by a time-reversed evolution, even after being damaged by an intruder. Here we reconsider the origin of the information recovery, and argue that the presence of classical chaos does not preclude it and only leads to a quantitative reduction of the recovery ratio. We also show how decoherence (i.e., entanglement with the intruder) limits the recovery, by proving an upper bound on the recovery ratio in terms of the entangling power of the intruder's action.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Recovering noise-free quantum observables

We introduce a technique for recovering noise-free observables in noisy quantum systems by combining the results of many slightly different experiments. Our approach is applicable to a variety of quantum systems, but we illustrate it with applications to quantum information and quantum sensing. The approach corresponds to repeating the same quantum evolution many times with known variations on the underlying systems' error properties, e.g., the spontaneous emission and dephasing times $T_1$ and $T_2$. As opposed to standard quantum error correction methods, which have an overhead in the number of qubits (many physical qubits must be added for each logical qubit), our method has only an overhead in the number of evaluations, allowing the overhead to, in principle, be hidden via parallelization. We show that the effective spontaneous emission $T_1$ and dephasing $T_2$ times can be increased using this method in both simulation and experiments on an actual quantum computer. We also show how to correct more complicated entangled states and how Ramsey fringes relevant to quantum sensing can be significantly extended in time.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Vortex cutting in superconductors

Vortex cutting and reconnection is an intriguing and still-unsolved problem central to many areas of classical and quantum physics, including hydrodynamics, astrophysics, and superconductivity. Here, in this paper, we describe a comprehensive investigation of the crossing of magnetic vortices in superconductors using time dependent Ginsburg-Landau modeling. Within a macroscopic volume, we simulate initial magnetization of an anisotropic high temperature superconductor followed by subsequent remagnetization with perpendicular magnetic fields, creating the crossing of the initial and newly generated vortices. The time resolved evolution of vortex lines as they approach each other, contort, locally conjoin, and detach, elucidates the fine details of the vortex-crossing scenario under practical situations with many interacting vortices in the presence of weak pinning. Finally, our simulations also reveal left-handed helical vortex instabilities that accompany the remagnetization process and participate in the vortex crossing events.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Comparing models for a unitary black hole S matrix

This paper compares features, challenges, and puzzles of different models for a unitary black hole S -matrix, focusing on both recent nonisometric models, as well as “nonviolent unitarization,” which is based on new quantum interactions of a black hole. As a foundation for comparison, the description of real-time Hawking evolution is first overviewed, including leading effects of gravitational dressing and backreaction. Connection is then made to qubit models for evolution, and some technology is outlined to facilitate their description. Important features of both nonisometric models and nonviolent unitarization are investigated in qubit models, which illustrate essential differences between the respective approaches. The nonisometric models present puzzles for understanding evolution of internal outgoing excitations, which can be excited by interactions such as particle decay. Qubit models for nonviolent unitarization are further developed, and nicely illustrate aspects of that approach. Some remaining questions in generalizing to more complete models for evolution are discussed. Published by the American Physical Society 2024

Astronomy & Astrophysics↗

Nonintrusive reduced order modeling framework for quasigeostrophic turbulence

In this study, we present a nonintrusive reduced order modeling (ROM) framework for large-scale quasistationary systems. The framework proposed in this work exploits the time series prediction capability of long short-term memory (LSTM) recurrent neural network architecture such that (1) in the training phase, the LSTM model is trained on the modal coefficients extracted from the high-resolution data snapshots using proper orthogonal decomposition (POD) transform, and (2) in the testing phase, the trained model predicts the modal coefficients for the total time recursively based on the initial time history. Hence, no prior information about the underlying governing equations is required to generate the ROM. To illustrate the predictive performance of the proposed framework, the mean flow fields and time series response of the field values are reconstructed from the predicted modal coefficients by using an inverse POD transform. As a representative benchmark test case, we consider a two-dimensional quasigeostrophic ocean circulation model which, in general, displays an enormous range of fluctuating spatial and temporal scales. We first demonstrate that the conventional Galerkin projection-based reduced order modeling of such systems requires a high number of POD modes to obtain a stable flow physics. In addition, ROM-Galerkin projection (ROM-GP) does not seem to capture the intermittent bursts appearing in the dynamics of the first few most energetic modes. However, the proposed nonintrusive ROM framework based on LSTM (ROM-LSTM) yields a stable solution even for a small number of POD modes. We also observe that the ROM-LSTM model is able to capture quasiperiodic intermittent bursts accurately, and yields a stable and accurate mean flow dynamics using the time history of a few previous time states, denoted as the lookback time window in this paper. We show several features of ROM-LSTM framework such as significantly higher accuracy than ROM-GP, and faster performance using larger time step size. Throughout the paper, we demonstrate our findings in terms of time series evolution of the field values and mean flow patterns, which suggest that the proposed fully nonintrusive ROM framework is robust and capable of predicting chaotic nonlinear fluid flows in an extremely efficient way compared to the conventional projection-based ROM framework.

42 ENGINEERING↗

Thermodynamic Phase Transition in Magnetic Reconnection

By examining the entropy production in fully kinetic simulations of collisional plasmas, it is shown that the transition from collisional Sweet-Parker reconnection to collisionless Hall reconnection may be viewed as a thermodynamic phase transition. The phase transition occurs when the reconnection electric field satisfies E = $E_{D}\sqrt{m{e}/{m}_i}$ , where ${m{e}/{m}_i}$ is the electron-to-ion mass ratio and E D is the Dreicer electric field. This condition applies for all ${m{e}/{m}_i}$, including ${m{e}/{m}_i}$ = 1 , where the Hall regime vanishes and a direct phase transition from the collisional to the kinetic regime occurs. In the limit ${m{e}/{m}_i}$ → 0, this condition is equivalent to there being a critical electron temperature $Te ≈ m_iΩ^{2}_{i}δ^{2}$, where $Ω_i$ is the ion cyclotron frequency and δ is the current sheet half-thickness. The heat capacity of the current sheet changes discontinuously across the phase transition, and a critical power law is identified in an effective heat capacity. A model for the time-dependent evolution of an isolated current sheet in the collisional regime is derived.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗