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Lattice parameters and electronic structure of BeMgZnO quaternary solid solutions: Experiment and theory

Be{sub x}Mg{sub y}Zn{sub 1−x−y}O semiconductor solid solutions are attractive for UV optoelectronics and electronic devices owing to their wide bandgap and capability of lattice-matching to ZnO. In this work, a combined experimental and theoretical study of lattice parameters, bandgaps, and underlying electronic properties, such as changes in band edge wavefunctions in Be{sub x}Mg{sub y}Zn{sub 1−x−y}O thin films, is carried out. Theoretical ab initio calculations predicting structural and electronic properties for the whole compositional range of materials are compared with experimental measurements from samples grown by plasma assisted molecular beam epitaxy on (0001) sapphire substrates. The measured a and c lattice parameters for the quaternary alloys Be{sub x}Mg{sub y}Zn{sub 1−x} with x = 0−0.19 and y = 0–0.52 are within 1%–2% of those calculated using generalized gradient approximation to the density functional theory. Additionally, composition independent ternary BeZnO and MgZnO bowing parameters were determined for a and c lattice parameters and the bandgap. The electronic properties were calculated using exchange tuned Heyd-Scuseria-Ernzerhof hybrid functional. The measured optical bandgaps of the quaternary alloys are in good agreement with those predicted by the theory. Strong localization of band edge wavefunctions near oxygen atoms for BeMgZnO alloy in comparison to the bulk ZnO is consistent with large Be-related bandgap bowing of BeZnO and BeMgZnO (6.94 eV). The results in aggregate show that precise control over lattice parameters by tuning the quaternary composition would allow strain control in Be{sub x}Mg{sub y}Zn{sub 1−x−y}O/ZnO heterostructures with possibility to achieve both compressive and tensile strain, where the latter supports formation of two-dimensional electron gas at the interface.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Wigner functions for nonclassical states of a collection of two-level atoms

The general theory of atomic angular momentum states is used to derive the Wigner distribution function for atomic angular momentum number states, coherent states, and squeezed states. These Wigner functions W(theta,phi) are represented as a pseudo-probability distribution in spherical coordinates theta and phi on the surface of a sphere of radius the square root of j(j +1) where j is the total angular momentum.

Agarwal, G. S.↗

Dimension-independent likelihood-informed MCMC

Many Bayesian inference problems require exploring the posterior distribution of high-dimensional parameters that represent the discretization of an underlying function. This work introduces a family of Markov chain Monte Carlo (MCMC) samplers that can adapt to the particular structure of a posterior distribution over functions. Two distinct lines of research intersect in the methods developed here. First, we introduce a general class of operator-weighted proposal distributions that are well defined on function space, such that the performance of the resulting MCMC samplers is independent of the discretization of the function. Second, by exploiting local Hessian information and any associated low-dimensional structure in the change from prior to posterior distributions, we develop an inhomogeneous discretization scheme for the Langevin stochastic differential equation that yields operator-weighted proposals adapted to the non-Gaussian structure of the posterior. The resulting dimension-independent and likelihood-informed (DILI) MCMC samplers may be useful for a large class of high-dimensional problems where the target probability measure has a density with respect to a Gaussian reference measure. Two nonlinear inverse problems are used to demonstrate the efficiency of these DILI samplers: an elliptic PDE coefficient inverse problem and path reconstruction in a conditioned diffusion.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Efficient sampling of free energy landscapes with functions in Sobolev spaces

Molecular simulations of biological and physical phenomena generally involve sampling complicated, rough energy landscapes characterized by multiple local minima. In this work, we introduce a new family of methods for advanced sampling that draw inspiration from functional representations used in machine learning and approximation theory. As shown here, such representations are particularly well suited for learning free energies using artificial neural networks. As a system evolves through phase space, the proposed methods gradually build a model for the free energy as a function of one or more collective variables, from both the frequency of visits to distinct states and generalized force estimates corresponding to such states. Implementation of the methods is relatively simple and, more importantly, for the representative examples considered in this work, they provide computational efficiency gains of up to several orders of magnitude over other widely used simulation techniques.

Approximation theory↗

Ellipsometry: dielectric functions of anisotropic crystals and symmetry

The optical functions of anisotropic materials can be determined using generalized ellipsometry, which can measure the cross-polarization coefficients (CPs) of the sample surface reflections. These CPs have several symmetry relations with respect to the symmetry of the crystal. This paper explores the symmetry relations of these CPs for uniaxial, orthorhombic, and monoclinic crystals and the requirements for generalized ellipsometry. Several ellipsometry measurement configurations are examined, including the requirements for the accurate measurements of the dielectric functions of anisotropic crystals.

Jellison, Gerald E.↗

Interpretation of solution scattering data from lipid nanodiscs

The structural information contained in solution scattering data from empty lipid nanodiscs is examined in the context of a multi-component geometric model. X-ray scattering data were collected on nanodiscs of different compositions at scattering vector magnitudes up to 2.0 Å −1 . Through the calculation of the partial form factor for each of the nanodisc components before the isotropic average, structural parameters in the model were correlated to the features observed in the X-ray scattering data and to the corresponding distance distribution function. It is shown that, in general, the features at ∼0.3–0.6 Å −1 in the scattering data correlate to the bilayer structure. The data also support the argument that the elliptical shape of nanodiscs found in model fitting is physical, rather than an artefact due to the nanodisc size distribution. The lipid chain packing peak at ∼1.5 Å −1 is visible in the data and reflects the lipid bilayer phase transition. The shape change in the distance distribution function across the phase transition suggests that the nanodiscs are more circular in the fluid phase. The implication of these findings for model fitting of empty and protein-loaded nanodiscs is discussed.

36 MATERIALS SCIENCE↗

XV-15 Structural-Acoustic Data

Tiltrotor aircraft are a potentially viable means of intercity travel. The tiltrotor is able to transport passengers relatively quickly from the center of a city to destinations within a 300-mile radius. For such vehicles to be commercially viable, the interior noise and vibration levels must be acceptable to the passengers. A review of the literature revealed very little structural-acoustic data related to the tiltrotor. For this reason, structural-acoustic measurements were taken aboard an XV-15 tiltrotor. The six flight conditions included five in level flight, nominally 140-220 knots, for airplane mode (nacelle at 0 degrees) and one out-of-ground-effect (OGE) hover (nacelle at 90 degrees). The flight test measurements included nine exterior surface pressures, five structural accelerations, and two interior pressures. These sensors were located near the tip path plane on the port side of the aircraft. One minute of data was acquired at each condition. The data is presented as time histories, autospectra, coherence functions, and cross-spectra. In general, for level flight, the measured data showed very little effect of forward flight speed except to change the amplitude of the response; however, the character of the response was found to be dependent on spatial location. In contrast, in the hover mode the spatial location had very little effect on the character of the response. Additionally, the report highlights: the coherence between the transducer data and the rotor tach signal; and transfer function calculations between the exterior pressures.

Lyle, Karen H.↗

Survey on stochastic distribution systems: A full probability density function control theory with potential applications

Complex systems seen either in general engineering practice or economics are subjected to ever increased uncertainties that are mostly represented as random variables or parameters, and the characteristics of random variables are represented by their probability density functions (PDFs). Controlling their PDFs means to shape their stochastic distributions and in general it would provide a full treatment for system analysis and operational control and optimization. This leads to the development of stochastic distribution control (SDC) systems theory in the past decades, where the original aim of the controller design is to realize a shape control of the distributions of certain random variables in their PDFs sense for some engineering processes. Indeed, once the PDFs of these random variables or parameters are used to describe their distribution characters, the control task is to obtain control signals so that the output PDFs of stochastic systems are made to follow their target PDFs. The subject of SDC was initially originated for non-Gaussian stochastic control systems design but has found a wide spectrum of applications in general systems in terms of data-driven modeling, analysis, signal processing (filtering), data mining via multivariable statistics, decision-making (optimization) for systems subjected to uncertainties and even in economics. In this context, SDC constitutes an effective primer tool for complex system analysis, control and operational optimizations. In this review paper, a detailed survey of the developments on the research of SDC systems will be made together with their wide spectrum applications and future perspectives.

42 ENGINEERING↗

Super quantum measures on effect algebras with the Riesz decomposition properties

We give one basis of the space of super quantum measures on finite effect algebras with the Riesz decomposition properties (RDP for short). Then we prove that the super quantum measures and quantum interference functions on finite effect algebras with the RDP are determined each other. At last, we investigate the relationships between the super quantum measures and the diagonally positive signed measures on finite effect algebras with the RDP in detail.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

On numerical solutions to the QCD ’t Hooft equation in the limit of large quark mass

First we give a short informal introduction to the theory behind the ’t Hooft equation. Then we consider numerical solutions to this equation in the limit of large fermion masses. It turns out that the spectrum of eigenvalues coincides with that of the Airy differential equation. Moreover when we take the Fourier transform of eigenfunctions, they look like the corresponding Airy functions with appropriate symmetry. It is known that these functions correspond to solutions of a one dimensional Schrodinger equation for a particle in a triangular potential well. So we find the analogy between this problem and the ’t Hooft equation. We also present a simple intuition behind these results.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Chapter 6 - Biokinetic Models

A biokinetic model is a set of mathematical functions that describe the time-dependent behavior of material that enters the body via a number of possible routes of intake. Biokinetic models are used to predict the time-dependent distribution of materials in the body and their rates of elimination along specific excretion pathways. The biokinetic models illustrated in this chapter are from published or upcoming reports of the International Commission on Radiological Protection (ICRP). The ICRP’s biokinetic models are generally first-order compartment models, with movement between compartments defined by transfer coefficients. A separate model for the intravenous injection case is not provided by the ICRP; this case can be addressed by assigning material to a blood compartment of the appropriate ICRP biokinetic model at time zero. The systemic biokinetic models used in Publication 30 are generally in the form of retention functions that may be interpreted as first-order compartmental models with one-directional flow of activity.

Leggett, Richard Wayne↗

Soil microbiome predictability increases with spatial and taxonomic scale

Soil microorganisms shape ecosystem function, yet it remains an open question whether we can predict the composition of the soil microbiome in places before observing it. Furthermore, it is unclear whether the predictability of microbial life exhibits taxonomic- and spatial-scale dependence, as it does for macrobiological communities. Here, we leverage multiple large-scale soil microbiome surveys to develop predictive models of bacterial and fungal community composition in soil, then test these models against independent soil microbial community surveys from across the continental United States. We find remark- able scale dependence in community predictability. The predictability of bacterial and fungal communities increases with the spatial scale of observation, and fungal predictability increases with taxonomic scale. These patterns suggest that there is an increasing importance of deterministic versus stochastic processes with scale, consistent with findings in plant and animal communities, suggesting a general scaling relationship across biology. Biogeochemical functional groups and high-level taxonomic groups of microorganisms were equally predictable, indicating that traits and taxonomy are both powerful lenses for understanding soil communities. Here, by focusing on out-of-sample prediction, these findings suggest an emerging generality in our understanding of the soil microbiome, and that this understanding is fundamentally scale dependent

Biogeography↗

Analysis of the Spectral Stability of the Generalized Runge–Kutta Methods Applied to Initial-Boundary-Value Problems for Equations of the Parabolic Type. II. Implicit Methods

We consider specific realizations of different implicit generalized Runge–Kutta methods as applied to the numerical integration with respect to time of initial-boundary-value problems for the second-order parabolic equations and investigate their spectral stability. It is shown that all implicit generalized Runge–Kutta methods are unconditionally spectrally stable but some of them have the conditional property of monotonicity of the numerical solution with respect to time. The functions of spectral stability of the implicit generalized Runge–Kutta methods are rational. We compare the analytic solution of the nonstationary one-dimensional problem of heat conduction with the numerical solutions of this problem obtained by different implicit generalized Runge–Kutta methods. It is shown that, in this case, the application of the one-stage Radau methods with subsequent discretization of the problem with respect to the space variable leads to the classical forward finite difference scheme (Laasonen scheme), whereas the use of the one-stage Gauss–Legendre method leads to a six-point symmetric scheme (Crank–Nicolson scheme). It is shown that diagonally implicit generalized Nørsett and Burrage methods are realized in almost the same way as the one-stage Radau and Gauss–Legendre methods but their accuracy in the time step is 10–1000 times higher. On the basis of comparison of the numerical and analytic solutions, we conclude that, in order to get practically suitable numerical solutions without any restrictions on the time step, it is reasonable to use one- and three-stage generalized Radau methods or two- and four-stage Lobatto IIIC methods. All other explicit and implicit generalized Runge–Kutta methods require certain restrictions imposed on the time step.

42 ENGINEERING↗

Quasinormal modes, echoes and the causal structure of the Green's function

Quasinormal modes describe the return to equilibrium of a perturbed system, in particular the ringdown phase of a black hole merger. But as globally-defined quantities, the quasinormal spectrum can be highly sensitive to global structure, including distant small perturbations to the potential. In what sense are quasinormal modes a property of the resulting black hole? We explore this question for the linearized perturbation equation with two potentials having disjoint bounded support. We give a composition law for the Wronskian that determines the quasinormal frequencies of the combined system. We show that over short time scales the evolution is governed by the quasinormal frequencies of the individual potentials, while the sensitivity to global structure can be understood in terms of echoes. We introduce an echo expansion of the Green’s function and show that, as expected on general grounds, at any finite time causality limits the number of echoes that can contribute. We illustrate our results with the soluble example of a pair of -function potentials. We explicate the causal structure of the Green’s function, demonstrating under what conditions two very different quasinormal spectra give rise to very similar ringdown waveforms.

79 ASTRONOMY AND ASTROPHYSICS↗

Numerical results for the thermal scattering functions

A recent formulation in radiative transfer defined the thermal scattering functions that characterize radiative transfer from a general plane-parallel finite medium driven solely by an internal distribution of thermal sources. Exiting diffuse intensities are expressed as space convolutions of the thermal scattering functions with any thermal source distribution. A parametric study is presented to obtain the basic structure of these scattering functions. The independent variables of these azimuthally independent functions are the direction cosine and source location, while the parameters are the single-scattering albedo, total optical depth, and the asymmetry factor in the Henyey-Greenstein phase function. The basic functional trends are discussed by using various parametric plots, and selected results are given to allow numerical checks. The computational method is invariant imbedding.

Cogley, A. C.↗

A design for an intelligent monitor and controller for space station electrical power using parallel distributed problem solving

The emphasis is on defining a set of communicating processes for intelligent spacecraft secondary power distribution and control. The computer hardware and software implementation platform for this work is that of the ADEPTS project at the Johnson Space Center (JSC). The electrical power system design which was used as the basis for this research is that of Space Station Freedom, although the functionality of the processes defined here generalize to any permanent manned space power control application. First, the Space Station Electrical Power Subsystem (EPS) hardware to be monitored is described, followed by a set of scenarios describing typical monitor and control activity. Then, the parallel distributed problem solving approach to knowledge engineering is introduced. There follows a two-step presentation of the intelligent software design for secondary power control. The first step decomposes the problem of monitoring and control into three primary functions. Each of the primary functions is described in detail. Suggestions for refinements and embelishments in design specifications are given.

Morris, Robert A.↗

Local conformational perturbations of the DNA molecule in the SG-model

Within the formalism of the Fokker–Planck equation, the influence of nonstationary external force, random force, and dissipation effects on dynamics local conformational perturbations (kink) propagating along the DNA molecule is investigated. Such waves have an important role in the regulation of important biological processes in living systems at the molecular level. As a dynamic model of DNA was used a modified sine-Gordon equation, simulating the rotational oscillations of bases in one of the chains DNA. The equation of evolution of the kink momentum is obtained in the form of the stochastic differential equation in the Stratonovich sense within the framework of the well-known McLaughlin and Scott energy approach. The corresponding Fokker–Planck equation for the momentum distribution function coincides with the equation describing the Ornstein–Uhlenbek process with a regular nonstationary external force. The influence of the nonlinear stochastic effects on the kink dynamics is considered with the help of the Fokker– Planck nonlinear equation with the shift coefficient dependent on the first moment of the kink momentum distribution function. Expressions are derived for average value and variance of the momentum. Examples are considered which demonstrate the influence of the external regular and random forces on the evolution of the average value and variance of the kink momentum. Within the formalism of the Fokker–Planck equation, the influence of nonstationary external force, random force, and dissipation effects on the kink dynamics is investigated in the sine–Gordon model. The equation of evolution of the kink momentum is obtained in the form of the stochastic differential equation in the Stratonovich sense within the framework of the well-known McLaughlin and Scott energy approach. The corresponding Fokker–Planck equation for the momentum distribution function coincides with the equation describing the Ornstein–Uhlenbek process with a regular nonstationary external force. The influence of the nonlinear stochastic effects on the kink dynamics is considered with the help of the Fokker–Planck nonlinear equation with the shift coefficient dependent on the first moment of the kink momentum distribution function. Expressions are derived for average value and variance of the momentum. Examples are considered which demonstrate the influence of the external regular and random forces on the evolution of the average value and variance of the kink momentum.

60 APPLIED LIFE SCIENCES↗

Two-loop beta function for complex scalar electroweak multiplets

We present the general form of the renormalizable four-point interactions of a complex scalar field furnishing an irreducible representation of SU(2), and derive a set of algebraic identities that facilitates the calculation of higher-order radiative corrections. As an application, we calculate the two-loop beta function for the SM extended by a scalar multiplet, and provide the result explicitly in terms of the group invariants. Our results include the evolution of the Higgs-portal couplings, as well as scalar “minimal dark matter”. We present numerical results for the two-loop evolution of the various couplings.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗