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At least 1,567 records · Page 87

Morphometric analysis of epidermal differentiation in primary roots of Zea mays

Epidermal differentiation in primary roots of Zea mays was divided into six cell types based on cellular shape and cytoplasmic appearance. These six cell types are: 1) apical protoderm, located at the tip of the root pole and characterized by periclinally flattened cells; 2) cuboidal protoderm, located approximately 230 microns from the root pole and characterized by cuboidal cells; 3) tabular epidermis, located approximately 450 microns from the root pole and characterized by anticlinally flattened cells; 4) cuboidal epidermis, located approximately 900 microns from the root pole and characterized by cuboidal cells having numerous small vacuoles; 5) vacuolate cuboidal epidermis, located approximately 1,500 microns from the root pole and characterized by cuboidal cells containing several large vacuoles; and 6) columnar epidermis, located approximately 2,200 microns from the root pole (i.e., at the beginning of the zone of elongation) and characterized by elongated cells. We also used stereology to quantify the cellular changes associated with epidermal differentiation. The quiescent center and the apical protoderm have significantly different ultrastructures. The relative volume of dictyosomes increases dramatically during the early stages of epidermal differentiation. This increase correlates inversely with the amount of coverage provided by the root cap and mucilage.

NASA Discipline Plant Biology↗

On the eigenvector bias of Fourier feature networks: From regression to solving multi-scale PDEs with physics-informed neural networks

Physics-informed neural networks (PINNs) are demonstrating remarkable promise in integrating physical models with gappy and noisy observational data, but they still struggle in cases where the target functions to be approximated exhibit high-frequency or multi-scale features. Here in this work we investigate this limitation through the lens of Neural Tangent Kernel (NTK) theory and elucidate how PINNs are biased towards learning functions along the dominant eigen-directions of their limiting NTK. Using this observation, we construct novel architectures that employ spatio-temporal and multi-scale random Fourier features, and justify how such coordinate embedding layers can lead to robust and accurate PINN models. Numerical examples are presented for several challenging cases where conventional PINN models fail, including wave propagation and reaction–diffusion dynamics, illustrating how the proposed methods can be used to effectively tackle both forward and inverse problems involving partial differential equations with multi-scale behavior.

42 ENGINEERING↗

Zonal gravity harmonics from long satellite arcs by a seminumeric method.

A zonal geopotential is presented to degree 21 from evaluation of mean elements for 21 satellites, including two of low (less than 20 deg) inclination. Each satellite is represented by an arc of at least one apsidal rotation. The lengths range from 50 to 660 days. Differential correction of the initial elements in all of the arcs, together with radiation pressure and atmospheric drag coefficients, is accomplished simultaneously with the correction for the zonal harmonics. The satellite orbits and their variations are generated by numerical integration of the Lagrange equations for mean elements. Disturbances due to precession and nutation, atmospheric drag, radiation pressure, and lunisolar gravity are added at 1- to 8-day intervals in the integrated orbits.

Wagner, C. A.↗

Computation of the inviscid supersonic flow over an external axial corner

A second-order finite-difference procedure is used to evaluate the inviscid supersonic flowfield surrounding an external axial corner composed of swept planar compression surfaces and representing the inlets on existing high-speed aircraft. The governing partial differential equations in conservation-law form are hyperbolic with respect to the axial coordinate and are solved iteratively by means of MacCormack's algorithm. The procedure treats both the peripheral shock wave and vortical singularities as discontinuities. Numerical results are presented for two parametric studies regarding the effects on the flowfield of varying the free-stream Mach number and the leading edge sweep of the horizontal wedge. Results of parametric Mach number study agree with the Mach number independence principle in that as the Mach number increases, such characteristics as shock shape, cross-flow sonic line location, and vortical singularity position approach an asymptote.

Kutler, P.↗

Identification evaluation methods

Methods for airplane parameter estimation, the equation error method, output error method, and two advanced methods are presented and their basic properties described. The advanced methods include the maximum likelihood and extended Kalman filter method. For a better understanding of the estimation techniques a first-order scalar differential equation is used as a model of the system under test. Application of the methods to a general multivariable linear system is briefly outlined. A note on the parameter estimation in the frequency domain is also presented. Numerical examples along with the comparison of results from various methods are given.

Klein, V.↗

On a modified streamline curvature method for the Euler equations

A modification of the streamline curvature method leads to a quasilinear second-order partial differential equation for the streamline coordinate function. The existence of a stream function is not required. The method is applied to subsonic and supersonic nozzle flow, and to axially symmetric flow with swirl. For many situations, the associated numerical method is both fast and accurate.

Cordova, Jeffrey Q.↗

Constraint treatment techniques and parallel algorithms for multibody dynamic analysis

Computational procedures for kinematic and dynamic analysis of three-dimensional multibody dynamic (MBD) systems are developed from the differential-algebraic equations (DAE's) viewpoint. Constraint violations during the time integration process are minimized and penalty constraint stabilization techniques and partitioning schemes are developed. The governing equations of motion, a two-stage staggered explicit-implicit numerical algorithm, are treated which takes advantage of a partitioned solution procedure. A robust and parallelizable integration algorithm is developed. This algorithm uses a two-stage staggered central difference algorithm to integrate the translational coordinates and the angular velocities. The angular orientations of bodies in MBD systems are then obtained by using an implicit algorithm via the kinematic relationship between Euler parameters and angular velocities. It is shown that the combination of the present solution procedures yields a computationally more accurate solution. To speed up the computational procedures, parallel implementation of the present constraint treatment techniques, the two-stage staggered explicit-implicit numerical algorithm was efficiently carried out. The DAE's and the constraint treatment techniques were transformed into arrowhead matrices to which Schur complement form was derived. By fully exploiting the sparse matrix structural analysis techniques, a parallel preconditioned conjugate gradient numerical algorithm is used to solve the systems equations written in Schur complement form. A software testbed was designed and implemented in both sequential and parallel computers. This testbed was used to demonstrate the robustness and efficiency of the constraint treatment techniques, the accuracy of the two-stage staggered explicit-implicit numerical algorithm, and the speed up of the Schur-complement-based parallel preconditioned conjugate gradient algorithm on a parallel computer.

Chiou, Jin-Chern↗

On transonic flow past a wave-shaped wall

This report is an extension of a previous investigation (described in NACA rep. 1069) concerned with the solution of the nonlinear differential equation for transonic flow past a wavy wall. In the present work several new notions are introduced which permit the solution of the recursion formulas arising from the method of integration in series. In addition, a novel numerical tests of convergence, applied to the power series (in transonic similarity parameter) representing the local Mach number distribution at the boundary, indicates that smooth symmetrical potential flow past the wavy wall is no longer possible once the critical value of the stream Mach number has been exceeded.

Kaplan, Carl↗

Calculation of the Scattering Amplitude Without Partial Wave Expansion

Two developments in the direct calculation of the angular differential scattering amplitude have been implemented: (a) The integral expansion of the scattering amplitude is simplified by analytically integration over the azimuthal angle. (b) The resulting integral as a function of scattering angle is calculated by using the numerically generated wave function from a finite element method calculation. Results for electron-hydrogen scattering in the static approximation will be shown to be as accurate as a partial wave expansion with as many l's as is necessary for convergence at the incident energy being calculated.

Shertzer, J.↗

Calculation of Scattering Amplitude Without Partial Analysis: Inclusion of Exchange - II

There was a method for calculating the whole scattering amplitude, f(Omega(sub k)), directly. The idea was to calculate the complete wave function Psi numerically, and use it in an integral expression for f, which can be reduced to a 2 dimensional quadrature. The original application was for e-H scattering without exchange. There the Schrodinger reduces a 2-d partial differential equation (pde), which was solved using the finite element method (FEM). Here we extend the method to the exchange approximation. The S.E. can be reduced to a pair of coupled pde's, which are again solved by the FEM. The formal expression for f(Omega(sub k)) consists two integrals, f+/- = f(sub d) +/- f(sub e); f(sub d) is formally the same integral as the no-exchange f. We have also succeeded in reducing f(sub e) to a 2-d integral. Results will be presented at the meeting.

Temkin, Aaron↗

Extended Analytic Device Optimization Employing Asymptotic Expansion

Analytic optimization of a thermoelectric junction often introduces several simplifying assumptionsincluding constant material properties, fixed known hot and cold shoe temperatures, and thermallyinsulated leg sides. In fact all of these simplifications will have an effect on device performance,ranging from negligible to significant depending on conditions. Numerical methods, such as FiniteElement Analysis or iterative techniques, are often used to perform more detailed analysis andaccount for these simplifications. While numerical methods may stand as a suitable solution scheme,they are weak in gaining physical understanding and only serve to optimize through iterativesearching techniques. Analytic and asymptotic expansion techniques can be used to solve thegoverning system of thermoelectric differential equations with fewer or less severe assumptionsthan the classic case. Analytic methods can provide meaningful closed form solutions and generatebetter physical understanding of the conditions for when simplifying assumptions may be valid.In obtaining the analytic solutions a set of dimensionless parameters, which characterize allthermoelectric couples, is formulated and provide the limiting cases for validating assumptions.Presentation includes optimization of both classic rectangular couples as well as practically andtheoretically interesting cylindrical couples using optimization parameters physically meaningful toa cylindrical couple. Solutions incorporate the physical behavior for i) thermal resistance of hot andcold shoes, ii) variable material properties with temperature, and iii) lateral heat transfer through legsides.

Thermoelectric Generators↗

Radiation Transport Around Axisymmetric Blunt Body Vehicles Using a Modified Differential Approximation

A moment method for computing 3-D radiative transport is applied to axisymmetric flows in thermochemical nonequilibrium. Such flows are representative of proposed aerobrake missions. The method uses the P-1 approximation to reduce the governing system of integro-di erential equations to a coupled set of partial di erential equations. A numerical solution method for these equations given actual variations of the radiation properties in thermochemical nonequilibrium blunt body flows is developed. Initial results from the method are shown and compared to tangent slab calculations. The agreement between the transport methods is found to be about 10 percent in the stagnation region, with the difference increasing along the flank of the vehicle.

Hartung, Lin C.↗

SUNDIALS time integrators for exascale applications with many independent systems of ordinary differential equations

Many complex systems can be accurately modeled as a set of coupled time-dependent partial differential equations (PDEs). However, solving such equations can be prohibitively expensive, easily taxing the world’s largest supercomputers. One pragmatic strategy for attacking such problems is to split the PDEs into components that can more easily be solved in isolation. This operator splitting approach is used ubiquitously across scientific domains, and in many cases leads to a set of ordinary differential equations (ODEs) that need to be solved as part of a larger “outer-loop” time-stepping approach. The SUNDIALS library provides a plethora of robust time integration algorithms for solving ODEs, and the U.S. Department of Energy Exascale Computing Project (ECP) has supported its extension to applications on exascale-capable computing hardware. In this paper, we highlight some SUNDIALS capabilities and its deployment in combustion and cosmology application codes (Pele and Nyx, respectively) where operator splitting gives rise to numerous, small ODE systems that must be solved concurrently.

97 MATHEMATICS AND COMPUTING↗

Efficient numerical algorithm for multi-level ionization of high-atomic-number gases

An efficient numerical algorithm for laser driven multi-level ionization of high-atomic-number gases is proposed and implemented in an electromagnetic particle-in-cell code SPACE. The algorithm is based on analytical solutions to the system of differential equations describing ionization evolution. Using analytical solutions resolves the multiscale issue of ionization due to different characteristic time scales of ionization processes and the main code time step. Algorithm efficiency and memory requirements are significantly improved by using a locally reduced system of differential equations. The algorithm also assigns proper orbital quantum numbers and their projections to ionization states. The algorithm is verified and validated using experimental data.

Cheng, A. (ORCID:000000021945282X)↗

Linearised Fokker–Planck collision model for gyrokinetic simulations

We introduce a gyrokinetic, linearised Fokker–Planck collision model that satisfies conservation laws and is accurate at arbitrary collisionalities. The differential test-particle component of the operator is exact; the integral field-particle component is approximated using a spherical harmonic and a modified Laguerre polynomial expansion developed by Hirshman and Sigmar (1976 Phys. Fluids 19 1532). The numerical methods of the implementation in the δf-gyrokinetic code stella (Barnes et al 2019 J. Comput. Phys. 391 365–80) are discussed, and conservation properties of the operator are demonstrated. The collision model is then benchmarked against the collision model of the gyrokinetic solver GS2 in the limiting cases of a reduced test-particle collision operator and energy- and momentum-conserving operator. The accuracy of the full collision model is investigated by solving the parallel Spitzer-Härm problem for the transport coefficients. It is shown that retaining collisional energy flux and higher-order terms in the field-particle operator reduces errors in the transport coefficients from 10%–25% for a simple momentum- and energy-conserving model to under 1%.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Competition between roughness and strength for scale-dependent surfaces

Rocks famously have scale-dependent strength, yet the actual dependence is notoriously hard to measure or incorporate into any theoretical framework. Natural rough surfaces present an opportunity to solve the problem. Surfaces sliding in shear evolve as protrusions collide. These asperities can deform or break, thus creating a new surface shape. In particular, natural surfaces have roughness at all scales as well as scale-dependent strength. Based on a scaling analysis, we have previously suggested that the scale-dependent aspect ratio of steady-state surfaces should be proportional to the scale-dependent shear strain at yield. If true, scale-dependent strength could easily be inferred from natural surfaces. Thus, moving beyond the scaling argument to a rigorous treatment of scale-dependent strength for multiscale rough surfaces in shear is important. However, analytic frameworks for analyzing multiscale problems are challenging, as conventional continuum mechanics typically involves a single value for a material property across scales. Here, in this work, we build on the formalism of Persson (2001) that presents a method to compute contact area for rough surfaces with a prescribed topographic spectrum using a stochastic differential equation. The Persson formalism allows for plastic yield under normal loading of otherwise elastic materials and leaves open the possibility of scale-dependent yield stress. In this study, we pursue this route to develop a theory and numerical results for the yielding of a rough, elastoplastic surface with scale-dependent yield stress. Here, we examine surfaces for which the power spectrum of the topography 𝐶 and yield stress 𝑌 follow power laws as a function of scale 𝜆, such that 𝐶∼𝜆 −𝑚 and 𝑌∼𝜆 −𝑛 , respectively. In this formal treatment of the problem, we focus on surfaces in contact and the resulting yield and do not impose shear. Numerical solutions show that the deviation from the elastic scaling solution is bounded as expected by the prior 1D heuristic scaling argument that anticipates the Hurst exponent as 1−𝑛. We also show that the plasticity is expected to erode the contacts if 𝑚 is lower than 𝑛−3, which corresponds to a Hurst exponent lower than 1−𝑛/2. This result is rigorously sound for 2D, i.e., realistic surfaces, and quantitatively different than the prior scaling argument. The theory now permits a correspondingly quantitative approach to interpreting natural surfaces.

elasticity↗

Generic Discretization Library

The GenDiL library is a collection of C++ software abstractions designed to discretize and solve partial differential equations (PDEs) for high-performance computing (HPC) applications. Its primary focus is on modern C++ generic programming, which helps ensure portability across various hardware architectures. The central idea behind the library is to provide building blocks for numerical algorithms-such as discretization methods and iteration patterns-so that domain experts can focus on the math, rather than the low-level details of hardware or implementation. By defining abstractions for data types, iteration over computational grids, and scheduling of operations, the library isolates the high-level PDE algorithms from the platform-specific optimizations needed to achieve efficient performance.

Dudouit, Yohann [Lawrence Livermore National Labor↗

Analytical Study of the Tumbling Motions of Vehicles Entering Planetary Atmospheres

The tumbling motion of vehicles entering planetary atmospheres is analyzed. A differential equation governing the tumbling motion, its arrest, and the subsequent oscillatory motion is obtained and identified as the equation for the fifth Painleve transcendant. An approximate analytical solution for the transcendant is derived. Comparisons with results obtained from numerical integration of the exact equations of motion indicate that the solution for the angle-of-attack history is sufficiently accurate to be of practical use.

PLANETARY ENTRY↗