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At least 1,567 records · Page 87

Inferring protein expression changes from mRNA in Alzheimer’s dementia using deep neural networks

Identifying the molecular systems and proteins that modify the progression of Alzheimer’s disease and related dementias (ADRD) is central to drug target selection. However, discordance between mRNA and protein abundance, and the scarcity of proteomic data, has limited our ability to advance candidate targets that are mainly based on gene expression. Therefore, by using a deep neural network that predicts protein abundance from mRNA expression, here we attempt to track the early protein drivers of ADRD. Specifically, by applying the clei2block deep learning model to 1192 brain RNA-seq samples, we identify protein modules and disease-associated expression changes that were not directly observed at the mRNA level. Moreover, pseudo-temporal trajectory inference based on the predicted proteome became more closely correlated with cognitive decline and hippocampal atrophy compared to RNA-based trajectories. This suggests that the predicted changes in protein expression could provide a better molecular representation of ADRD progression. Furthermore, overlaying clinical traits on protein pseudotime trajectory identifies protein modules altered before cognitive impairment. These results demonstrate how our method can be used to identify potential early protein drivers and possible drug targets for treating and/or preventing ADRD.

60 APPLIED LIFE SCIENCES↗

Information Content of a Synergy of Ground-Based and Space-Based Infrared Sounders. Part I: Clear-Sky Environments

Abstract Profiles of atmospheric temperature and water vapor from remotely sensed platforms provide critical observations within the temporal and spatial gaps of the radiosonde network. The 2017 National Academies of Science Decadal Survey highlighted that observations of the planetary boundary layer (PBL) from the current space-based observing system are not of the necessary accuracy or resolution for monitoring and predicting high-impact weather phenomena. One possible solution to improving observations of the PBL is supplementing the existing space-based observing system with a network of ground-based profilers. A synthetic information content study is developed utilizing profiles from the Atmospheric Radiation Measurement (ARM) program sites at the Southern Great Plains (SGP), east North Atlantic (ENA), and North Slope of Alaska (NSA) to assess the benefits, in terms of degrees of freedom (DOF), vertical resolution, and uncertainties, of a synergy between the ground-based Atmospheric Emitted Radiance Interferometer (AERI) with space-based hyperspectral infrared (IR) sounders. A combination of AERI with any of the three polar-orbiting IR sounders: the Atmospheric Infrared Sounder (AIRS), the Cross-track Infrared Sounder (CrIS), or the Infrared Atmospheric Sounding Interferometer (IASI), results in a DOF increase of 30%–40% in the surface-to-700-hPa layer compared to the space-based instrument alone. Introducing AERI measurements to the observing system also results in significant improvements to vertical resolution and uncertainties in the bottom 1000 m of the atmosphere compared to CrIS measurements alone. A synergy of CrIS and AERI exceeds the 1-km-vertical-resolution goal set by the Decadal Survey in the lowest 1000 m.

54 ENVIRONMENTAL SCIENCES↗

Learning generative neural networks with physics knowledge

Deep generative neural networks have enabled modeling complex distributions, but incorporating physics knowledge into the neural networks is still challenging and is at the core of current physics-based machine learning research. To this end, we propose a physics generative neural network (PhysGNN), a new class of generative neural networks for learning unknown distributions in a physical system described by partial differential equations (PDE). PhysGNN couples PDE systems with generative neural networks. It is a fully differentiable model that allows back-propagation of gradients through both numerical PDE solvers and generative neural networks, and is trained by minimizing the discrete Wasserstein distance between generated and observed probability distributions of the PDE outputs using the stochastic gradient descent method. Moreover, PhysGNN does not require adversarial training like standard generative neural networks, which offers better stability than adversarial training. We show that PhysGNN can learn complex distributions in stochastic inverse problems, where conventional methods such as maximum likelihood estimation and momentum matching methods may be inapplicable when little knowledge is known about the form of unknown distributions or the physical model is too complex. Furthermore, our method allows physics-based generative neural network training for learning complex distributions in the context of differential equations.

97 MATHEMATICS AND COMPUTING↗

Behavior, Energy, Autonomy, Mobility Modeling Framework (BEAM) v1.0

The Behavior, Energy, Autonomy, and Mobility (BEAM) model is an integrated, agent-based travel demand simulation framework. Individual agents express preferences through a utility- maximizing evolutionary algorithm that minimizes each individual’s cost and time spent traveling via diverse modal options, including the competition for scarce supply resources such as parking spaces and charging infrastructure. BEAM simulates the essential elements that compose a dynamic transportation system. From the road network, parking and charging infrastructure, to the transit system and a synthetic population with plans and preferences, the virtual system is an amalgamation of multiple spatially resolved layers that together represent an integrated transportation system. BEAM is an extension to the MATSim (Multi-Agent Transportation Simulation) model, where agents employ reinforcement learning across successive simulated days to maximize their personal utility through plan mutation (exploration) and selecting between previously executed plans (exploitation). The BEAM model shifts some of the behavioral emphasis in MATSim from across-day planning to within- day planning, where agents dynamically respond to the state of the system during the mobility simulation. In BEAM, agents can plan across all major modes of travel including driving, walking, biking, transit, and demand-responsive ride hailing. It is designed to integrate with other open source transportation models, such as ActivitySim.

Lazarus, Jessica↗

Networked Microgrids Optimization

This project is mainly about the operation optimization of three networked microgrids (MG), including centralized optimization and distributed optimization. The alternating direction method of multipliers (ADMM) algorithm is used for distributed optimization. In the distribution network considered here, there is a Distribution Management system (DMS) as the system coordinator and several networked microgrids. In grid-connected mode, power could be imported or exported at the distribution substation bus according to the utility rate, and the exchanged power at point of common coupling (PCC) of any microgrid has a limitation. In islanded mode, the power imports/exports at the distribution substation are zero. In both grid-connected and islanded mode, the distribution substation is taken as a slack bus with fixed voltage magnitude.

Chen, Yang [Oak Ridge National Laboratory (ORNL), ↗

A fast microprocessor communication network design for interprocessor communications for an integrated flight control system

A node design with connectivity four is presented whose communication processor handles data at four million bits/sec on each of the four channels into the node, and on each of the four channels out of the node, for a total node capacity of 32 million bits/sec. An integrated flight control system real-time application of this communication network design is discussed. It is shown that such high speed node communication hardware, arranged in the topological configuration of a minimum diameter graph with connectivity four and all links active, has good potential for real time control applications requiring reliability, availability, and survivability characteristics.

Kelly, G. L.↗

A neural based intelligent flight control system for the NASA F-15 flight research aircraft

A flight control concept that can identify aircraft stability properties and continually optimize the aircraft flying qualities has been developed by McDonnell Aircraft Company under a contract with the NASA-Dryden Flight Research Facility. This flight concept, termed the Intelligent Flight Control System, utilizes Neural Network technology to identify the host aircraft stability and control properties during flight, and use this information to design on-line the control system feedback gains to provide continuous optimum flight response. This self-repairing capability can provide high performance flight maneuvering response throughout large flight envelopes, such as needed for the National Aerospace Plane. Moreover, achieving this response early in the vehicle's development schedule will save cost.

Urnes, James M.↗

A linear method for analyzing lightning field changes

A constrained, least-squares method for analyzing multiple-station measurements of lightning field changes (delta Es) is introduced. Previous methods have attempted to fit the spatial pattern of lightning delta Es using nonlinear models, such as a point charge (Q) or a point dipole (P) model. With the linear method, the delta Es are described not by models but by a general volume charge distribution that is deposited on a large (40 x 40 x 20 cu km) Cartesian grid above the measuring network. A linear system of equations is used to relate the measured delta Es to the charges that are deposited at each grid point. With this approach, the information content of the measurements can be quantified by an eigenanalysis of the covariance matrix of the linear system. Constraints can be used to reduce the infinity of possible solutions to the linear system and also to reduce systematic biases that can be introduced by the method of solution. It is shown that a Landweber iterative method, derived from the general method of steepest descent, can be used to solve the linear system and that the resulting volume charge distributions are generally consistent with computer-simulated charge sources, when these sources are over the measuring network. The Landweber iteration has also provided solutions for natural lightning events that are consistent with Q- and P-model results.

Koshak, William J.↗

The Electric Power System of the International Space Station: A Platform for Power Technology Development

The electrical power system developed for the International Space Station represents the largest space-based power system ever designed and, consequently, has driven some key technology aspects and operational challenges. The full U.S.-built system consists of a 160-Volt dc primary network, and a more tightly regulated 120-Volt dc secondary network. Additionally, the U.S. system interfaces with the 28-Volt system in the Russian segment. The international nature of the Station has resulted in modular converters, switchgear, outlet panels, and other components being built by different countries, with the associated interface challenges. This paper provides details of the architecture and unique hardware developed for the Space Station, and examines the opportunities it provides for further long-term space power technology development, such as concentrating solar arrays and flywheel energy storage systems.

Gietl, Eric B.↗

Supporting Weather Data

Since its founding in 1992, Global Science & Technology, Inc. (GST), of Greenbelt, Maryland, has been developing technologies and providing services in support of NASA scientific research. GST specialties include scientific analysis, science data and information systems, data visualization, communications, networking and Web technologies, computer science, and software system engineering. As a longtime contractor to Goddard Space Flight Center s Earth Science Directorate, GST scientific, engineering, and information technology staff have extensive qualifications with the synthesis of satellite, in situ, and Earth science data for weather- and climate-related projects. GST s experience in this arena is end-to-end, from building satellite ground receiving systems and science data systems, to product generation and research and analysis.

Source record↗

Systems and Methods for Collaboratively Controlling at Least One Aircraft

An unmanned vehicle management system includes an unmanned aircraft system (UAS) control station controlling one or more unmanned vehicles (UV), a collaborative routing system, and a communication network connecting the UAS and the collaborative routing system. The collaborative routing system being configured to receive flight parameters from an operator of the UAS control station and, based on the received flight parameters, automatically present the UAS control station with flight plan options to enable the operator to operate the UV in a defined airspace.

Estkowski, Regina I.↗

Analyzing Cyber Security Threats on Cyber-Physical Systems Using Model-Based Systems Engineering

The spectre of cyber attacks on aerospace systems can no longer be ignored given that many of the components and vulnerabilities that have been successfully exploited by the adversary on other infrastructures are the same as those deployed and used within the aerospace environment. An important consideration with respect to the mission/safety critical infrastructure supporting space operations is that an appropriate defensive response to an attack invariably involves the need for high precision and accuracy, because an incorrect response can trigger unacceptable losses involving lives and/or significant financial damage. A highly precise defensive response, considering the typical complexity of aerospace environments, requires a detailed and well-founded understanding of the underlying system where the goal of the defensive response is to preserve critical mission objectives in the presence of adversarial activity. In this paper, a structured approach for modeling aerospace systems is described. The approach includes physical elements, network topology, software applications, system functions, and usage scenarios. We leverage Model-Based Systems Engineering methodology by utilizing the Object Management Group's Systems Modeling Language to represent the system being analyzed and also utilize model transformations to change relevant aspects of the model into specialized analyses. A novel visualization approach is utilized to visualize the entire model as a three-dimensional graph, allowing easier interaction with subject matter experts. The model provides a unifying structure for analyzing the impact of a particular attack or a particular type of attack. Two different example analysis types are demonstrated in this paper: a graph-based propagation analysis based on edge labels, and a graph-based propagation analysis based on node labels.

MBSE↗

Advance Local Mobility Through Energy Efficient Mobility Systems Technologies

Everyone deserves reliable, affordable, and safe transportation to connect people to jobs, healthcare, education, and recreation. Our transportation systems are interconnected, multimodal networks working together to move people and goods. These systems are dynamic and are being reshaped by factors such as population trends, new technologies, shifting labor models, economic forces, and changing climate. Energy efficient mobility systems (EEMS) technologies can help transportation planners ensure changes in our transportation systems are equitable and sustainable by improving energy efficiency, travel time, and affordability, as well as overall access to mobility. Transportation planners and decision makers can use the following EEMS tools and strategies to advance local mobility.

ADVANCED PROPULSION SYSTEMS↗

Distributed Conditions for Small-signal Stability of Power Grids and Local Control Design

Operating modern power grids with stability guarantees is markedly important. Typical methods for analyzing and certifying power grid stability are largely centralized relying on the ability of the system operator to gather network-wide information and accurately compute the system's eigenvalues. These methods are oftentimes not privacy-preserving and computationally burdensome. They are therefore, not well-suited to modern power grids where small-signal stability has to be evaluated timely, efficiently and in a privacy-preserving fashion. Herein, we introduce a distributed methodology for certifying small-signal stability of power grids and designing the local controllers. First, we analytically derive distributed conditions for network-wide stability that bus agents can inspect using local information. By leveraging these conditions, we then introduce a distributed control design algorithm (DCDA) that can guide the local control design so that stability of the interconnected system is guaranteed. The agents that adopt the proposed distributed algorithm are responsible for tuning their local controllers, producing their local control commands and ensuring that their local stability condition is met. The system operator is only responsible for verifying network-wide stability upon receiving affirmative responses from all agents and, announcing, that the overall system is stable. The proposed DCDA algorithm is numerically validated via simulations using the IEEE 39-bus system.

24 POWER TRANSMISSION AND DISTRIBUTION↗

pyflowline: a mesh-independent river network generator for hydrologic models

River networks are crucial in hydrologic and Earth system models. Accurately representing river networks in spatially distributed hydrologic models requires considering the model's spatial discretization and computational mesh. However, current methods of generating river networks for hydrologic models do not typically support unstructured meshes. Unstructured meshes offer numerous advantages over traditional, structured meshes. To overcome this limitation, we developed PyFlowline, a Python package that generates mesh-independent river networks. With PyFlowline, hydrologic modelers can generate conceptual river networks and their topological relationships for both structured and unstructured meshes.

47 OTHER INSTRUMENTATION↗

Engineering monitoring expert system's developer

This research project is designed to apply artificial intelligence technology including expert systems, dynamic interface of neural networks, and hypertext to construct an expert system developer. The developer environment is specifically suited to building expert systems which monitor the performance of ground support equipment for propulsion systems and testing facilities. The expert system developer, through the use of a graphics interface and a rule network, will be transparent to the user during rule constructing and data scanning of the knowledge base. The project will result in a software system that allows its user to build specific monitoring type expert systems which monitor various equipments used for propulsion systems or ground testing facilities and accrues system performance information in a dynamic knowledge base.

Lo, Ching F.↗

Parkes radio science system design and testing for Voyager Neptune encounter

The Radio Science System installed at Parkes, Australia for the Voyager Neptune encounter was specified to meet the same stringent requirements that were imposed upon the Deep Space Network Radio Science System. The system design and test methodology employed to meet these requirements at Parkes are described, and data showing the measured performance of the system are presented. The results indicate that the system operates with a comfortable margin on the requirements. There was a minor problem with frequency-dependent spurious signals which could not be fixed before the encounter. Test results characterizing these spurious signals are included.

Rebold, T. A.↗

Assessment of Microphysical Models in the National Combustion Code (NCC) for Aircraft Particulate Emissions: Particle Loss in Sampling Lines

This paper at first describes the fluid network approach recently implemented into the National Combustion Code (NCC) for the simulation of transport of aerosols (volatile particles and soot) in the particulate sampling systems. This network-based approach complements the other two approaches already in the NCC, namely, the lower-order temporal approach and the CFD-based approach. The accuracy and the computational costs of these three approaches are then investigated in terms of their application to the prediction of particle losses through sample transmission and distribution lines. Their predictive capabilities are assessed by comparing the computed results with the experimental data. The present work will help establish standard methodologies for measuring the size and concentration of particles in high-temperature, high-velocity jet engine exhaust. Furthermore, the present work also represents the first step of a long term effort of validating physics-based tools for the prediction of aircraft particulate emissions.

Wey, Thomas↗