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DOE OSTI2025

Genome sequences of four novel Endozoicomonas strains associated with a tropical octocoral in a long-term aquarium facility

ABSTRACT We report the genome sequences of four Endozoicomonas sp. strains isolated from the octocoral Litophyton maintained long term at an aquarium facility. Our analysis reveals the coding potential for versatile polysaccharide metabolism; Type II, III, IV, and VI secretion systems; and the biosynthesis of novel ribosomally synthesized and post-translationally modified peptides.

Marques, Matilde (ORCID:0000000194430893)↗

DOE OSTI2021

pnnl/galas

Codebase for analyzing large atomistic simulation results using graph analytics. Analysis of large molecular simulations is difficult due to size and memory constrains in commonly used analysis software. This code was developed to analyze an ~8 million atom polycrystalline Al system under shear, with a particular emphasis on identifying defect structures. This code applies graph theory to reduce the system to components of interest and applies associated algorithms to characterize these components.

Pope, Jenna (Bilbrey)↗

DOE OSTI2020

A Review of TSUNAMI Applications

The TSUNAMI-1D and TSUNAMI-3D sequences for generating k eff sensitivity coefficients were first released in SCALE 5 in 2004. Several other tools were introduced in the same release, including primarily the TSUNAMI-IP code for uncertainty analysis and similarity assessments. The TSUNAMI sequences added capabilities for identifying important reactions and data for systems using sensitivity coefficients and also introduced new quantitative tools for rigorously assessing the similarity of systems. Over time, the capabilities of these tools have grown, and their use has expanded into other areas such as nuclear data assessment and nuclear covariance data testing. This paper discusses applications of the TSUNAMI tools for sensitivity calculations, sensitivity/uncertainty (S/U)-based validation, and nuclear data testing. This paper is one of a series of papers at this conference on the development and use of TSUNAMI tools. The other papers address the development of the TSUNAMI methods and the use of TSUNAMI for critical experiment design and optimization.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

DOE OSTI2022

How to measure the W Mass: A Theory Perspective [Slides]

CDF used ResBos code at NNLL+NLO accuracy. ResBos v2 is able to go to N 3 LL+NNLO accuracy. ResBos2 corrected major criticism of incorrect angular functions in the ResBos code. Mimic CDF analysis using pseudoexperiments at N 3 LL+NNLO accuracy. We report find shift to be consistent with 0 MeV and up to 10 MeV in worse case.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2022

How to measure the W Mass: A Theory Perspective [Slides]

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2023

Integrators

Many electromagnetic measurements detect signals that are the time derivative of the actual quantity of interest. Examples include so-called “B-dot” and “D-dot” detectors that are used for measuring transient magnetic and electric fields. Integration of these signals to recover the quantity of interest is performed either by hardware integrators in the signal line, or by software coding in the analysis programming. Hardware integration is usually done using a classic resistive-capacitive (RC) circuit, or internally in the detector by induction (L/R) or stray capacitance (RC). These hardware integration methods are only approximate, and must be corrected for distortion. This is usually called “droop correction.” In this note, we will examine this correction in some detail. Transient analysis via Laplace transforms will be used to simplify the mathematics. A rudimentary understanding of this method is assumed.

42 ENGINEERING↗

DOE OSTI2025

SCALE Analyses of Scenarios in the TRISO-based Heat Pipe Microreactor Fuel Cycle

This report documents the application of the SCALE code to the analysis of a TRistructural-ISOtropic (TRISO)-based heat pipe microreactor (HPMR) within the context of its nuclear fuel cycle stages. The evaluation was conducted in support of the US Nuclear Regulatory Commission’s ongoing efforts to assess modeling capabilities for advanced non–light-water reactor technologies. The generic HPMR selected as a representative microreactor concept features a compact core design that incorporates TRISO fuel compacts, passive heat removal via heat pipes, and a transportable configuration intended for deployment in remote environments.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

DOE OSTI2026

Understanding NBI heating and fueling in LTX-β tokamak

My work on the contract DE-SC=0023274 (July, 2022 - July, 2025) was focused on understanding the plasma fueling by NBI. On Dec. 1998 with Sergei Krasheninnikov (UCSD, San Diego, CA) we initiated the Li Wall Fusion (LiWFusion) as a new concept of magnetic fusion [1]. The new 1 2 plasma 3 4 5 6 2.1 Overview of rate coefficients, mean-free paths λH0 , and diffusions coefficients 6 2. GSV code for ⟨σv⟩ analysis of NBI fueling concept was a reaction of the lack of luck of tokamak fusion with QDT = 1 on TFTR and JET. We recognized the edge plasma cooling by recycling to be the route reason of the tokamak problems on the way to burning plasma. LiWFusion relies on plasma pumping by a lithium layer on the inner walls of the plasma chamber, combined with the plasma heating and fueling by the Neutral Beam Injection (NBI). These two innovations eliminate the route problem of the tokmak fusion. The concept became theoretically mature in 2006. In 2012, the technology of continuously Flowing Liquid Lithium (24/7-FLiLi) was invented by me for the future implementations of the LWFusion concept. At the same time, my every presentation on LiWFusion to International Symposium on Lithium Applications since 2010 was objected by some person with words “Everybody since the 1970s knows that plasma fueling by NBI is impossible”. I dropped the name of the author of this objection and ignored his views. My work on the current grant on NBI fueling of LTX-β not only clarified the issue but resolved it in an astonishing way. The NBI fueling was fully understood (thus humiliating the current dogmatic fusion community). The new future of LTX-β dedicated for decades to Li in tokamaks, as well as of the entire magnetic fusion program was envisioned, in sharp contrast with the fallure of OFES in the post-TFTR era of 21st century.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2026

NREL Hydrogen Sensor Testing Laboratory and Smart Hydrogen Wide Area Monitoring

The NREL Hydrogen sensor laboratory aims to ensure that hydrogen sensor technology is available to meet end-user needs and to foster the proper use of sensors by advancing next generation sensing and analysis techniques, supporting codes and standards development, and improving component reliability systems.

08 HYDROGEN↗

DOE OSTI2021

IEA Wind Energy Task 37 - System Engineering - Aerodynamic Optimization Case Study

This paper presents the results from the first IEA Wind Task 37 aerodynamic optimization case study. 8 participants applied their optimization tools to a purely aerodynamic problem and the results were compared. Overall, the different tools produced widely different designs, while there was better agreement in the improvement achieved. This highlights the fact that further investigation is needed to try to understand these differences and develop best practices. There were too many differences between the different analysis and optimization codes to determine the sources of these differences. However, several potential sources of discrepancy were identified for further investigation. One hypothesis is that one potential source of discrepancy is that the design problem itself is relatively flat in design directions of constant loading. This flatness would impact the convergence in the optimization, while at the same time mean that discrepancies in the design itself would be less severe.

49 EE - Wind and Water Power Program - Wind (EE-4W↗

DOE OSTI2022

Improving Residential Building Simulations Through Large-Scale Empirical Validation

Residential building energy simulations are increasingly used for energy-efficient building design, codes and standards analysis, home certifications and ratings, utility programs, and technology assessments. Various software tools exist to perform residential building simulations, and these tools often use different models, inputs, and assumptions. This leads to inconsistencies that can undermine confidence in the predicted results. Validation of these tools can increase confidence by ensuring their accuracy and consistency. One way to validate simulation tools is through empirical testing, which compares predicted energy usage to measured utility billing data. This paper describes the process of data collection, data standardization, and empirical validation, and illustrates its use with our residential EnergyPlus (R)-based software. The data and process can be extended to other simulation tools and contribute to improving residential building simulations more broadly.

empirical validation↗

DOE OSTI2026

MSD CoP Webinar: "Advances in MSD-LIVE to Support the MSD Community of Practice"

Context: This webinar was hosted by the MultiSector Dynamics Community of Practice (MSD CoP; https://multisectordynamics.org). Advances in MSD-LIVE to Support the MSD Community of Practice Presenters: Casey Burleyson and Zoe Guillen (Pacific Northwest National Laboratory) Abstract: The MultiSector Dynamics Living, Intuitive, Value-adding, Environment (MSD-LIVE; msdlive.org) is a cloud-based data management system and advanced computing platform that enables MSD researchers to document and archive their data, run their models and analysis tools, and share their data, software, and workflows within the MSD Community of Practice. Recently, several high-profile datasets have attracted many new users to MSD-LIVE. This webinar has two goals: 1) To refamiliarize the MSD community and new users with the components of the platform (e.g., the data repository, model training notebooks, and data dashboards) and to highlight examples of how these components are advancing MSD science and 2) To demonstrate new features in v3 of the platform, released in late 2025. The main new feature in v3 is the ability to interactively explore data in MSD-LIVE without downloading it. MSD-LIVE users can now click a button in our data repository and launch a blank Jupyter notebook with access to the underlying data on AWS. Users can use the notebook to write analysis, visualization, or subsetting routines that process the data directly on the AWS cloud. We also added a GitHub integration feature that allows users to share analysis or visualization code they develop with the community of MSD-LIVE users. The webinar will wrap up with a look at what's coming next for MSD-LIVE in 2026. Moderator: Patrick M. Reed (MSD CoP Facilitation Team) This webinar was held on: May 12th, 2026 from 1-2 PM EST.

Open Science↗

DOE OSTI2024

Y1000 gene family

All relative analysis data and codes used in this study are available on the Figshare data repository. You can also find the codes on the Github repository at https://github.com/vnuii/Y1000_gene_family.

budding yeast↗

DOE OSTI2024

Microbes’ effect on switchgrass germination and growth under drought depends on life stage

Repository for code used for analysis of effects of the belowground microbiome on switchgrass responses to drought.

drought↗

NASA NTRS1970

Neutron ages computed from experimental activation data

Computer program reduces time manually required to compute neutron age and to provide definite plan of procedural choices. Program allows convenient comparison of several fitting and error analysis procedures. Program code provides for error estimation of various integration options.

Semler, T. T.↗

NASA NTRS1975

Bringing wings of change - NASA's airfoil research program

A review is presented of progress in attaining technical objectives in three areas of semiautomatic airfoil development: software, hardware, and applications. Software objectives seek improved mathematical models and computer codes for flow analysis and design optimization for a variety of conditions. The 17-step iterative computer model used in designing the GA (W)-1 airfoil is effective but not yet fully automated; with present methods only single-point computer optimization is possible. Hardware objectives calling for improvement in test facilities and techniques are met in part by the introduction of the Langley (F-3C) wind tunnel for independent evaluation of transonic Mach number and Reynolds effects up to 12-16 million, and by a two-dimensional test section for the Langley 1/3 transonic cryogenic tunnel which will extend the Reynolds number to 50 million. The current status of low-speed, thin, and rotorcraft airfoil development programs is discussed.

Pierpont, P. K.↗

NASA NTRS1977

A survey of compiler development aids

A theoretical background was established for the compilation process by dividing it into five phases and explaining the concepts and algorithms that underpin each. The five selected phases were lexical analysis, syntax analysis, semantic analysis, optimization, and code generation. Graph theoretical optimization techniques were presented, and approaches to code generation were described for both one-pass and multipass compilation environments. Following the initial tutorial sections, more than 20 tools that were developed to aid in the process of writing compilers were surveyed. Eight of the more recent compiler development aids were selected for special attention - SIMCMP/STAGE2, LANG-PAK, COGENT, XPL, AED, CWIC, LIS, and JOCIT. The impact of compiler development aids were assessed some of their shortcomings and some of the areas of research currently in progress were inspected.

Buckles, B. P.↗

NASA NTRS1976

Implementation on a nonlinear concrete cracking algorithm in NASTRAN

A computer code for the analysis of reinforced concrete structures was developed using NASTRAN as a basis. Nonlinear iteration procedures were developed for obtaining solutions with a wide variety of loading sequences. A direct access file system was used to save results at each load step to restart within the solution module for further analysis. A multi-nested looping capability was implemented to control the iterations and change the loads. The basis for the analysis is a set of mutli-layer plate elements which allow local definition of materials and cracking properties.

Herting, D. N.↗