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At least 1,549 records · Page 86

Multibody instantly centered moving Lagrangian observer schemes. I - Formulation. II - Application to vehicular simulations

A finite element modeling method employing an instantly centered moving Lagrangian observer is proposed to solve multibody problems involving several rotating components, each with its own rotational history. The present technique allows the steady-state behavior of the problem simulation to be rendered stationary and time independent. In the second part, the method is extended to model the steady and transient response of ground-based automotive-type vehicular systems, including the modeling of vehicular obstruction rollover events.

Padovan, Joseph↗

ISPAN (Interactive Stiffened Panel Analysis): A tool for quick concept evaluation and design trade studies

Interactive Stiffened Panel Analysis (ISPAN) modules, written in FORTRAN, were developed to provide an easy to use tool for creating finite element models of composite material stiffened panels. The modules allow the user to interactively construct, solve and post-process finite element models of four general types of structural panel configurations using only the panel dimensions and properties as input data. Linear, buckling and post-buckling solution capability is provided. This interactive input allows rapid model generation and solution by non finite element users. The results of a parametric study of a blade stiffened panel are presented to demonstrate the usefulness of the ISPAN modules. Also, a non-linear analysis of a test panel was conducted and the results compared to measured data and previous correlation analysis.

Hairr, John W.↗

SCITUNE: Aligning Large Language Models with Human-Curated Scientific Multimodal Instructions

Instruction finetuning is a popular paradigm to align large language models (LLM) with human intent. Despite its popularity, this idea is less explored in improving the LLMs to align existing foundation models with scientific disciplines, concepts and goals. In this work, we present SciTune as a tuning framework to improve the ability of LLMs to follow scientific multimodal instructions. To test our methodology, we use a human-generated scientific instruction tuning dataset and train a large multimodal model LLaMA-SciTune that connects a vision encoder and LLM for science-focused visual and language understanding. LLaMA-SciTune significantly outperforms the state-of-the-art models in the generated figure types and captions in multiple scientific multimodal benchmarks. In comparison to the models that are fine-tuned with machine generated data only, LLaMA-SciTune surpasses human performance on average and in many sub-categories on the ScienceQA benchmark.

• Artificial intelligence (AI) / machine learning ↗

Next-Generation Angular Distribution Models for Top-of-Atmosphere Radiative Flux Calculation from the CERES Instruments: Methodology

The top-of-atmosphere (TOA) radiative fluxes are critical components to advancing our understanding of the Earth's radiative energy balance, radiative effects of clouds and aerosols, and climate feedback. The Clouds and the Earth's Radiant Energy System (CERES) instruments provide broadband shortwave and longwave radiance measurements. These radiances are converted to fluxes by using scene-type-dependent angular distribution models (ADMs). This paper describes the next-generation ADMs that are developed for Terra and Aqua using all available CERES rotating azimuth plane radiance measurements. Coincident cloud and aerosol retrievals, and radiance measurements from the Moderate Resolution Imaging Spectroradiometer (MODIS), and meteorological parameters from Goddard Earth Observing System (GEOS) data assimilation version 5.4.1 are used to define scene type. CERES radiance measurements are stratified by scene type and by other parameters that are important for determining the anisotropy of the given scene type. Anisotropic factors are then defined either for discrete intervals of relevant parameters or as a continuous functions of combined parameters, depending on the scene type. Significant differences between the ADMs described in this paper and the existing ADMs are over clear-sky scene types and polar scene types. Over clear ocean, we developed a set of shortwave (SW) ADMs that explicitly account for aerosols. Over clear land, the SW ADMs are developed for every 1 latitude1 longitude region for every calendar month using a kernel-based bidirectional reflectance model. Over clear Antarctic scenes, SW ADMs are developed by accounting the effects of sastrugi on anisotropy. Over sea ice, a sea-ice brightness index is used to classify the scene type. Under cloudy conditions over all surface types, the longwave (LW) and window (WN) ADMs are developed by combining surface and cloud-top temperature, surface and cloud emissivity, cloud fraction, and precipitable water. Compared to the existing ADMs, the new ADMs change the monthly mean instantaneous fluxes by up to 5Wm(exp -2) on a regional scale of 1 deg. latitude x 1 deg. longitude, but the flux changes are less than 0.5Wm(exp -2) on a global scale.

Su, W.↗

The Community Land Model Version 5: Description of New Features, Benchmarking, and Impact of Forcing Uncertainty

The Community Land Model (CLM) is the land component of the Community Earth System Model (CESM) and is used in several global and regional modeling systems. In this paper, we introduce model developments included in CLM version 5 (CLM5), which is the default land component for CESM2. We assess an ensemble of simulations, including prescribed and prognostic vegetation state, multiple forcing data sets, and CLM4, CLM4.5, and CLM5, against a range of metrics including from the International Land Model Benchmarking (ILAMBv2) package. CLM5 includes new and updated processes and parameterizations: (1) dynamic land units, (2) updated parameterizations and structure for hydrology and snow (spatially explicit soil depth, dry surface layer, revised groundwater scheme, revised canopy interception and canopy snow processes, updated fresh snow density, simple firn model, and Model for Scale Adaptive River Transport), (3) plant hydraulics and hydraulic redistribution, (4) revised nitrogen cycling (flexible leaf stoichiometry, leaf N optimization for photosynthesis, and carbon costs for plant nitrogen uptake), (5) global crop model with six crop types and time-evolving irrigated areas and fertilization rates, (6) updated urban building energy, (7) carbon isotopes, and (8) updated stomatal physiology. New optional features include demographically structured dynamic vegetation model (Functionally Assembled Terrestrial Ecosystem Simulator), ozone damage to plants, and fire trace gas emissions coupling to the atmosphere. Conclusive establishment of improvement or degradation of individual variables or metrics is challenged by forcing uncertainty, parametric uncertainty, and model structural complexity, but the multivariate metrics presented here suggest a general broad improvement from CLM4 to CLM5.

58 GEOSCIENCES↗

Predictive models of the genetic bases underlying budding yeast fitness in multiple environments

Abstract The ability of organisms to adapt and survive depends on the effects of genes and the environment on fitness. However, the multigenic nature of fitness and genotype-by-environment interactions hinder our understanding of the genetic basis of fitness. Here, we established fitness prediction models for 35 environments using machine learning and existing fitness data and different genetic variant types for a Saccharomyces cerevisiae population. Models revealed that the predictive ability of genetic variants varied across environments, with copy number variants explaining the majority of fitness variation in most cases. Model interpretation showed that different variant types identified distinct gene sets associated with predictive variants. These gene sets were significantly enriched in experimentally validated genes affecting fitness in only a subset of environments, indicating that many genes influencing fitness remain unexplored. Notably, non-experimentally validated genes were more important than validated ones for fitness predictions. Gene contributions to predictions were both isolate- and environment-dependent, pointing to gene-by-gene and gene-by-environment interactions. Furthermore, models uncovered experimentally validated and novel candidate genetic interactions for a well-characterized stress, the fungicide benomyl. These findings highlight the feasibility of identifying the genetic basis of fitness by using different genetic variant types and offer novel targets for future functional analysis.

DNA copy number variations↗

Cluster analysis of occupancy schedules in residential buildings in the United States

The energy performance of residential buildings significantly depends on the building occupants’ behavior, which can be highly variable. When the heating, ventilation and air conditioning (HVAC) system is controlled based on the presence or absence of occupants in a building, occupant behavior is of even further importance to its energy performance. In current practice, building energy simulation tools generally use a single occupancy profile to represent the building’s occupancy schedule, the schedule of which is considered to be the same, regardless of the type of household being modeled. Thus, there is significant potential for improvement to allow for more flexibility and accuracy in calculation of occupancy. The objective of this study is to assess the variations in the typical types of occupancy schedules followed by the U.S. population using cluster analysis. American Time Use Survey data, which statically represents the overall U.S. population’s activities, across 12 years (2006–2017), is used. The ATUS data is segregated into smaller groups based on age and weekday/weekend, then divided into activities that are considered “at home” and “away from home”, which are mapped to the presence or non-presence of occupants in the home. Cluster analysis is then used to identify common types of occupancy schedule patterns for each age group. Three main types of patterns are obtained from cluster analysis for each age group, which together represent approximately 88% of people in the United States. The output of the cluster analysis is further analyzed to evaluate the variation in characteristics, including the number of times leaving home, time of day when leaving the home, and the timespan of absence from the home. The results of this study provide detailed insights on how typical occupants in the United States spend their time in residential spaces which can be used to create occupancy profiles for residential buildings. Finally, these occupancy profiles could be utilized inform an assessment of the energy use impact of occupancy-based controls of energy consuming systems and technologies.

42 ENGINEERING↗

Reweighting configurations generated by transferable, machine learned models for protein sidechain backmapping

Multiscale modeling requires the linking of models at different levels of detail, with the goal of gaining accelerations from lower fidelity models while recovering fine details from higher resolution models. Communication across resolutions is particularly important in modeling soft matter, where tight couplings exist between molecular-level details and mesoscale structures. While multiscale modeling of biomolecules has become a critical component in exploring their structure and self-assembly, backmapping from coarse-grained to fine-grained, or atomistic, representations presents a challenge, despite recent advances through machine learning. A major hurdle, especially for strategies utilizing machine learning, is that backmappings can only approximately recover the atomistic ensemble of interest. We demonstrate conditions for which backmapped configurations may be reweighted to exactly recover the desired atomistic ensemble. By training separate decoding models for each sidechain type, we develop an algorithm based on normalizing flows and geometric algebra attention to autoregressively propose backmapped configurations for any protein sequence. Critical for reweighting with modern protein force fields, our trained models include all hydrogen atoms in the backmapping and make probabilities associated with atomistic configurations directly accessible. We also demonstrate, however, that reweighting is extremely challenging despite state-of-the-art performance on recently developed metrics and generation of configurations with low energies in atomistic protein force fields. Through detailed analysis of configurational weights, we show that machine-learned backmappings must not only generate configurations with reasonable energies, but also correctly assign relative probabilities under the generative model. These are broadly important considerations in generative modeling of atomistic molecular configurations.

Monroe, Jacob I. [Univ. of Arkansas, Fayetteville,↗

Magnetic clouds and force-free fields with constant alpha

Magnetic clouds observed at 1 AU are modeled as cylindrically symmetric, constant alpha force-free magnetic fields. The model satisfactorily explains the types of variations of the magnetic field direction that are observed as a magnetic cloud moves past a spacecraft in terms of the possible orientations of the axis of a magnetic cloud. The model also explains why the magnetic field strength is observed to be higher inside a magnetic cloud than near its boundaries. However, the model predicts that the magnetic field strength profile should be symmetric with respect to the axis of the magnetic cloud, whereas observations show that this is not generally the case.

Burlaga, L. F.↗

Canopy reflectance modelling of semiarid vegetation

Three different types of remote sensing algorithms for estimating vegetation amount and other land surface biophysical parameters were tested for semiarid environments. These included statistical linear models, the Li-Strahler geometric-optical canopy model, and linear spectral mixture analysis. The two study areas were the National Science Foundation's Jornada Long Term Ecological Research site near Las Cruces, NM, in the northern Chihuahuan desert, and the HAPEX-Sahel site near Niamey, Niger, in West Africa, comprising semiarid rangeland and subtropical crop land. The statistical approach (simple and multiple regression) resulted in high correlations between SPOT satellite spectral reflectance and shrub and grass cover, although these correlations varied with the spatial scale of aggregation of the measurements. The Li-Strahler model produced estimated of shrub size and density for both study sites with large standard errors. In the Jornada, the estimates were accurate enough to be useful for characterizing structural differences among three shrub strata. In Niger, the range of shrub cover and size in short-fallow shrublands is so low that the necessity of spatially distributed estimation of shrub size and density is questionable. Spectral mixture analysis of multiscale, multitemporal, multispectral radiometer data and imagery for Niger showed a positive relationship between fractions of spectral endmembers and surface parameters of interest including soil cover, vegetation cover, and leaf area index.

Franklin, Janet↗

Flow matching beyond kinematics: Generating jets with particle identification and trajectory displacement information

We introduce the first generative model trained on the etlass dataset. Our model generates jets at the constituent level, and it is a permutation-equivariant continuous normalizing flow (CNF) trained with the flow matching technique. It is conditioned on the jet type, so that a single model can be used to generate the ten different jet types of etlass. For the first time, we also introduce a generative model that goes beyond the kinematic features of jet constituents. The etlass dataset includes more features, such as particle-ID and track impact parameter, and we demonstrate that our CNF can accurately model all of these additional features as well. Our generative model for etlass expands on the versatility of existing jet generation techniques, enhancing their potential utility in high-energy physics research, and offering a more comprehensive understanding of the generated jets. Published by the American Physical Society 2025

Birk, Joschka (ORCID:0000000219310127)↗

Benchmarking the performance of uncertainty quantification methods for neural network-based interatomic potentials

Machine-learned interatomic potentials (ML-IAPs) continue to gain popularity as accurate, computationally efficient replacements for traditional, physics-based interatomic potentials and expensive ab initio methods. Uncertainty quantification (UQ) of ML-IAPs is a growing area of research as UQ is critical in many applications of IAPs, such as developing curated datasets, active learning-based data augmentation, self-improving models, and estimating the uncertainty of molecular dynamics simulations. In this paper, we construct and benchmark a series of different neural network potentials (NNPs) with varying network architectures to determine the performance of these models with respect to both the mean and uncertainty calibration error. Each NNP method is specifically designed to predict either epistemic or aleatoric uncertainty with particular focus on the differences in behavior between the epistemic and aleatoric uncertainty estimates. We benchmark these methods using multiple datasets common in the ML-IAP literature. The results show that the aleatoric uncertainty from single-shot model architectures is a competitive alternative to ensemble-based epistemic uncertainty predictions in regions of sufficient data-density. However, in regions where the representative data is sparse, aleatoric uncertainty models tend to overpredict and epistemic methods tend to underpredict the actual model error. We conclude that the type of UQ is crucial when discussing performance of probabilistic model results as different methods have different performance characteristics depending on the regime in which they are evaluated. Therefore, the type of UQ method should be carefully evaluated against both the data characteristics and requirements for the intended application.

97 MATHEMATICS AND COMPUTING↗

City and County Commercial Building Inventories

The Commercial Building Inventories provide modeled data on commercial building type, vintage, and area for each U.S. city and county. Please note this data is modeled and more precise data may be available through county assessors or other sources. Commercial building stock data is estimated using CoStar Realty Information, Inc. building stock data. This data is part of a suite of state and local energy profile data available at the "State and Local Energy Profile Data Suite" link below and builds on Cities-LEAP energy modeling, available at the "EERE Cities-LEAP Page" link below. Examples of how to use the data to inform energy planning can be found at the "Example Uses" link below.

Array↗

Estimation of Regional Evapotranspiration Using Remotely Sensed Land Surface Temperature. Part 2: Application of Equilibrium Evaporation Model to Estimate Evapotranspiration by Remote Sensing Technique

In a humid region like Japan, it seems that the radiation term in the energy balance equation plays a more important role for evapotranspiration then does the vapor pressure difference between the surface and lower atmospheric boundary layer. A Priestley-Taylor type equation (equilibrium evaporation model) is used to estimate evapotranspiration. Net radiation, soil heat flux, and surface temperature data are obtained. Only temperature data obtained by remotely sensed techniques are used.

Kotoda, K.↗

Stratospheric Heterogeneous Chemistry and Microphysics: Model Development, Validation and Applications

The objectives of this project are to: define the chemical and physical processes leading to stratospheric ozone change that involve polar stratospheric clouds (PSCS) and the reactions occurring on the surfaces of PSC particles; study the formation processes, and the physical and chemical properties of PSCS, that are relevant to atmospheric chemistry and to the interpretation of field measurements taken during polar stratosphere missions; develop quantitative models describing PSC microphysics and heterogeneous chemical processes; assimilate laboratory and field data into these models; and calculate the extent of chemical processing on PSCs and the impact of specific microphysical processes on polar composition and ozone depletion. During the course of the project, a new coupled microphysics/physical-chemistry/ photochemistry model for stratospheric sulfate aerosols and nitric acid and ice PSCs was developed and applied to analyze data collected during NASA's Arctic Airborne Stratospheric Expedition-II (AASE-II) and other missions. In this model, detailed treatments of multicomponent sulfate aerosol physical chemistry, sulfate aerosol microphysics, polar stratospheric cloud microphysics, PSC ice surface chemistry, as well as homogeneous gas-phase chemistry were included for the first time. In recent studies focusing on AASE measurements, the PSC model was used to analyze specific measurements from an aircraft deployment of an aerosol impactor, FSSP, and NO(y) detector. The calculated results are in excellent agreement with observations for particle volumes as well as NO(y) concentrations, thus confirming the importance of supercooled sulfate/nitrate droplets in PSC formation. The same model has been applied to perform a statistical study of PSC properties in the Northern Hemisphere using several hundred high-latitude air parcel trajectories obtained from Goddard. The rates of ozone depletion along trajectories with different meteorological histories are presently being systematically evaluated to identify the principal relationships between ozone loss and aerosol state. Under this project, we formulated a detailed quantitative model that predicts the multicomponent composition of sulfate aerosols under stratospheric conditions, including sulfuric, nitric, hydrochloric, hydrofluoric and hydrobromic acids. This work defined for the first time the behavior of liquid ternary-system type-1b PSCS. The model also allows the compositions and reactivities of sulfate aerosols to be calculated over the entire range of environmental conditions encountered in the stratosphere (and has been incorporated into a trajectory/microphysics model-see above). Important conclusions that derived from this work over the last few years include the following: the HNO3 content of liquid-state aerosols dominate PSCs below about 195 K; the freezing of nitric acid ice from sulfate aerosol solutions is likely to occur within a few degrees K of the water vapor frost point; the uptake and reactions of HCl in liquid aerosols is a critical component of PSC heterogeneous chemistry. In a related application of this work, the inefficiency of chlorine injection into the stratosphere during major volcanic eruptions was explained on the basis of nucleation of sulfuric acid aerosols in rising volcanic plumes leading to the formation of supercooled water droplets on these aerosols, which efficiently scavenges HCl via precipitation.

Turco, Richard P.↗

Benchmarking CME Arrival Time and Impact: Progress on Metadata, Metrics, and Events

Accurate forecasting of the arrival time and subsequent geomagnetic impacts of coronal mass ejections (CMEs) at Earth is an important objective for space weather forecasting agencies. Recently, the CME Arrival and Impact working team has made significant progress toward defining communit yagreed metrics and validation methods to assess the current state of CME modeling capabilities. This will allow the community to quantify our current capabilities and track progress in models over time. First, it is crucial that the community focuses on the collection of the necessary metadata for transparency and reproducibility of results. Concerning CME arrival and impact we have identified six different metadata types: 3D CME measurement, model description, model input, CME (non)arrival observation, model output data, and metrics and validation methods. Second, the working team has also identified a validation time period, where all events within the following two periods will be considered: 1 January 2011 to 31 December 2012 and January 2015 to 31 December 2015. Those two periods amount to a total of about 100 hit events at Earth and a large amount of misses. Considering a time period will remove any bias in selecting events and the event set will represent a sample set that will not be biased by user selection. Lastly, we have defined the basic metrics and skill scores that the CME Arrival and Impact working team will focus on.

Verbeke, C.↗

An efficient solution of low-frequency magnetic problems with voltage sources using all-frequency stable formulation

The modeling and simulation of magnetic problems at low frequencies are considered in this paper. When excited with a voltage source, conduction current is induced in the circuit of interest, which generates the magnetic field. This type of problems is modeled using the all-frequency stable formulation, which employs the potential description of fields with an inhomogeneous Coulomb gauge. With the aid of the stable formulation, the low-frequency breakdown problem is circumvented and both electric and magnetic fields can be solved in a single simulation. To solve large magnetic problems efficiently, it is necessary to employ an iterative solver with an efficient preconditioner. In this work, a preconditioner based on the incomplete LU decomposition is constructed and applied in a wide frequency range. Several numerical examples are given to demonstrate the performance of the proposed method.

Mekonnen, Minyechil↗

Current Activities in the Advanced Exploration Systems ISRU Project

Media Filter MOXIE support: completed flow performance tests and initial dust loading tests of the MOXIE HEPA filter in the Mars Flow Loop Designed and fabricated prototype full-scale scroll filter for testing of renewable filter performance Mars Flow Loop upgrades: installed more sensitive instrumentation, improved imaging, and increased run duration capability Electrostatic Precipitator (ESP) Plasma-physics based model predicts particle charge and trajectory Characterizing dust environment from fluidized-bed injection dust environment using laser sheet visualization and Fine Particle Analyzer Sabatier Design Study Defined the Sabatier design space, including reactor type, thermal management, gas recycling/separation Modeled Sabatier systems with one or two reactors with different types of thermal management Adding thermal management schemes and recycling and gas separation to model Catalyst Screening Performing compression testing on new and used catalyst pellets Performing vibration testing on different catalyst pellet types under different load conditions Preparing to test catalysts for performance and degradation

In-Situ Resource Utilization↗