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At least 1,549 records · Page 86

Improving the accuracy of discretisations of the vector transport equation on the lowest-order quadrilateral Raviart-Thomas finite elements

Within finite element models of fluids, vector-valued fields such as velocity or momentum variables are commonly discretised using the Raviart-Thomas elements. However, when using the lowest-order quadrilateral Raviart-Thomas elements, standard finite element discretisations of the vector transport equation typically have a low order of spatial accuracy. This paper describes two schemes that improve the accuracy of transporting such vector-valued fields on two-dimensional curved manifolds. The first scheme that is presented reconstructs the transported field in a higher-order function space, where the transport equation is then solved. The second scheme applies a mixed finite element formulation to the vector transport equation, simultaneously solving for the transported field and its vorticity. In this work, an approach to stabilising this mixed vector-vorticity formulation is presented that uses a Streamline Upwind Petrov-Galerkin (SUPG) method. These schemes are then demonstrated, along with their accuracy properties, through some numerical tests. Two new test cases are used to assess the transport of vector-valued fields on curved manifolds, solving the vector transport equation in isolation. The improvement of the schemes is also shown through two standard test cases for rotating shallow-water models.

97 MATHEMATICS AND COMPUTING↗

Global sensitivity analysis in stochastic simulators of uncertain reaction networks

Stochastic models of chemical systems are often subjected to uncertainties in kinetic parameters in addition to the inherent random nature of their dynamics. Uncertainty quantification in such systems is generally achieved by means of sensitivity analyses in which one characterizes the variability with the uncertain kinetic parameters of the first statistical moments of model predictions. In this work, we propose an original global sensitivity analysis method where the parametric and inherent variability sources are both treated through Sobol’s decomposition of the variance into contributions from arbitrary subset of uncertain parameters and stochastic reaction channels. The conceptual development only assumes that the inherent and parametric sources are independent, and considers the Poisson processes in the random-time-change representation of the state dynamics as the fundamental objects governing the inherent stochasticity. Here, a sampling algorithm is proposed to perform the global sensitivity analysis, and to estimate the partial variances and sensitivity indices characterizing the importance of the various sources of variability and their interactions. The birth-death and Schlögl models are used to illustrate both the implementation of the algorithm and the richness of the proposed analysis method. The output of the proposed sensitivity analysis is also contrasted with a local derivative-based sensitivity analysis method classically used for this type of systems.

97 MATHEMATICS AND COMPUTING↗

Dose rate verification for SNS spent structures - 25433

Residual dose rate measurements were conducted on two Spallation Neutron Source spent structures, target vessel no. 13 and proton beam window no. 5, after extraction from their service locations. These measurements were used to verify calculation methods for radionuclide inventory assessment that are typically performed for nuclear waste characterization and transportation. Neutronics analyses for predicting residual dose rates were carried out using complex and rigorous geometric models of the structures and their surroundings. Calculational results were analyzed and compared to the measured dose rates. (authors)

43 PARTICLE ACCELERATORS↗

Adaptive hybrid simulations for multiscale stochastic reaction networks

The probability distribution describing the state of a Stochastic Reaction Network (SRN) evolves according to the Chemical Master Equation (CME). It is common to estimate its solution using Monte Carlo methods such as the Stochastic Simulation Algorithm (SSA). In many cases, these simulations can take an impractical amount of computational time. Therefore, many methods have been developed that approximate sample paths of the underlying stochastic process and estimate the solution of the CME. A prominent class of these methods include hybrid methods that partition the set of species and the set of reactions into discrete and continuous subsets. Such a partition separates the dynamics into a discrete and a continuous part. Simulating such a stochastic process can be computationally much easier than simulating the exact discrete stochastic process with SSA. Moreover, the quasi-stationary assumption to approximate the dynamics of fast subnetworks can be applied for certain classes of networks. However, as the dynamics of a SRN evolves, these partitions may have to be adapted during the simulation. We develop a hybrid method that approximates the solution of a CME by automatically partitioning the reactions and species sets into discrete and continuous components and applying the quasi-stationary assumption on identifiable fast subnetworks. Our method does not require any user intervention and it adapts to exploit the changing timescale separation between reactions and/or changing magnitudes of copy-numbers of constituent species. We demonstrate the efficiency of the proposed method by considering examples from systems biology and showing that very good approximations to the exact probability distributions can be achieved in significantly less computational time. This is especially the case for systems with oscillatory dynamics, where the system dynamics change considerably throughout the time-period of interest.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

TH-CD-202-05: DECT Based Tissue Segmentation as Input to Monte Carlo Simulations for Proton Treatment Verification Using PET Imaging

Purpose: To improve agreement of predicted and measured positron emitter yields in patients, after proton irradiation for PET-based treatment verification, using a novel dual energy CT (DECT) tissue segmentation approach, overcoming known deficiencies from single energy CT (SECT). Methods: DECT head scans of 5 trauma patients were segmented and compared to existing decomposition methods with a first focus on the brain. For validation purposes, three brain equivalent solutions [water, white matter (WM) and grey matter (GM) – equivalent with respect to their reference carbon and oxygen contents and CT numbers at 90kVp and 150kVp] were prepared from water, ethanol, sucrose and salt. The activities of all brain solutions, measured during a PET scan after uniform proton irradiation, were compared to Monte Carlo simulations. Simulation inputs were various solution compositions obtained from different segmentation approaches from DECT, SECT scans, and known reference composition. Virtual GM solution salt concentration corrections were applied based on DECT measurements of solutions with varying salt concentration. Results: The novel tissue segmentation showed qualitative improvements in %C for patient brain scans (ground truth unavailable). The activity simulations based on reference solution compositions agree with the measurement within 3–5% (4–8Bq/ml). These reference simulations showed an absolute activity difference between WM (20%C) and GM (10%C) to H2O (0%C) of 43 Bq/ml and 22 Bq/ml, respectively. Activity differences between reference simulations and segmented ones varied from −6 to 1 Bq/ml for DECT and −79 to 8 Bq/ml for SECT. Conclusion: Compared to the conventionally used SECT segmentation, the DECT based segmentation indicates a qualitative and quantitative improvement. In controlled solutions, a MC input based on DECT segmentation leads to better agreement with the reference. Future work will address the anticipated improvement of quantification accuracy in patients, comparing different tissue decomposition methods with an MR brain segmentation. Acknowledgement: DFG-MAP and HIT-Heidelberg Deutsche Forschungsgemeinschaft (MAP); Bundesministerium fur Bildung und Forschung (01IB13001)

60 APPLIED LIFE SCIENCES↗

Sensitivity Calculations for Systems with Polyethylene Reflector Materials Using CLUTCH

The SCALE 6.2.4 code package contains four sequences for calculating $k_{eff}$ sensitivity coefficients. Two of these sequences use deterministic transport solvers: a one-dimensional (1D) capability based on XSDRN, and a two-dimensional (2D) capability based on NEWT. These sequences are restricted to the multigroup (MG) treatment of neutron energy. The three-dimensional (3D) sequences use the KENO V.a or KENO-VI Monte Carlo transport codes and can be used to calculate sensitivity coefficients with either MG or continuous-energy (CE) transport. The 3D sensitivities are ultimately reported in an MG structure, regardless of the method used in the transport calculations. If desired, the sensitivity coefficients can be reported with very fine energy resolution from a CE calculation, but they are calculated only in the MG library structure in the MG mode. CE TSUNAMI methods are available in SCALE starting in SCALE version 6.2. Sensitivity coefficients were generated using the 3D sequences as part of the generation of the SCALE 6.2.2 Validation Report; difficulties encountered when using the CLUTCH method for thick, fissionable-material reflectors were discussed and investigated as documented in a previous paper. This paper discusses the difficulties encountered in generating accurate sensitivity coefficients using the CLUTCH technique for polyethylene reflectors for two fast spectrum benchmarks. Direct perturbation (DP) calculations were performed to confirm the accuracy of the total sensitivity coefficient for important isotopes with large sensitivities in the system. Discrepancies were detected for CLUTCH-calculated sensitivity coefficients in the reflector of a critical experiment with a radial polyethylene reflector. A simple polyethylene-reflected plutonium sphere was then used to further investigate the discrepancy. Calculations performed using the iterated fission probability (IFP) method generated accurate sensitivity coefficients in both cases. The results of this study emphasize the need to confirm CLUTCH sensitivity results with DP calculations. IFP calculations are generally less efficient but more reliable than CLUTCH calculations. Improvements to the CLUTCH methodology that retain the greater efficiency but address identified difficulties are therefore potentially useful to analysts.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Global functions in global-local finite-element analysis of localized stresses in prismatic structures

An important consideration in the global local finite-element method (GLFEM) is the availability of global functions for the given problem. The role and mathematical requirements of these global functions in a GLFEM analysis of localized stress states in prismatic structures are discussed. A method is described for determining these global functions. Underlying this method are theorems due to Toupin and Knowles on strain energy decay rates, which are related to a quantitative expression of Saint-Venant's principle. It is mentioned that a mathematically complete set of global functions can be generated, so that any arbitrary interface condition between the finite element and global subregions can be represented. Convergence to the true behavior can be achieved with increasing global functions and finite-element degrees of freedom. Specific attention is devoted to mathematically two-dimensional and three-dimensional prismatic structures. Comments are offered on the GLFEM analysis of NASA flat panel with a discontinuous stiffener. Methods for determining global functions for other effects are also indicated, such as steady-state dynamics and bodies under initial stress.

Dong, Stanley B.↗

Order conditions for nonlinearly partitioned Runge-Kutta methods

Recently, a new class of nonlinearly partitioned Runge–Kutta (NPRK) methods was proposed for nonlinearly partitioned systems of autonomous ordinary differential equations y' = F(y, y). The target class of problems are those in which different scales, stiffnesses, or physics are coupled in a nonlinear way, wherein the desired partition cannot be written in a classical additive or component-wise fashion. Here we use a rooted-tree analysis to derive full-order conditions for NPRKM methods, where M denotes the number of nonlinear partitions. Due to the nonlinear coupling and thereby the mixed product differentials, it turns out that the standard node-colored rooted tree analysis used in analyzing ODE integrators does not naturally apply. Instead we develop a new edge-colored rooted-tree framework to address the nonlinear coupling. The resulting order conditions are enumerated, are provided directly for up to fourth order with M = 2 and third order with M = 3, and are related to existing order conditions of additive and partitioned RK methods. We conclude with an example that shows how the nonlinear order conditions can be used to obtain an embedded estimate of the state-dependent nonlinear coupling strength in a dynamical system.

97 MATHEMATICS AND COMPUTING↗

Simulating Bubble Deformations Using the Intersection Marker (ISM) Front-Tracking method

Surface and volume tracking methods have been under continuous development over the last 50+ years since the first MAC (Marker and Cell) and SLIC (Simple Line Interface Calculation) methods appeared in the 1960's. The sustained interest in simulating multiphase flow stem from their many practical applications in the physical world; from biological systems, to chemical systems, to boiling dynamics and atmospheric heat and mass transfer. The ability to capture the details of interface evolution as well as the physics of interfacial heat and mass transfer has thus been a tempting goal for many numerical researchers. Numerical analysts, apart from the well-established and popular VOF PLIC (Volume of Fluid, Piecewise Linear Interface Construction) method, can now call upon even more computationally intensive options such as the LS (Level Set) method, the FT (Front Tracking) method, the MoF (Moment of Fluid) method and hybrid methods.

42 ENGINEERING↗

Creation of the VADER Code in SCALE [Abstract]

The VADER (Validation Analysis Data Evaluation Resource) is a new module in SCALE 6.3 that has been derived from the legacy USLSTATS program. VADER is a tool that allows the determination of bias and bias uncertainty for criticality safety computational methods. The older USLSTATS program, written in Java, existed outside of SCALE and provided tools to calculate only the confidence band with administrative margin (sometimes called USL-1) and the single-sided uniform width closed interval (USL-2). For normality testing it only offered a crude chi- squared normality test that had no user-configurable options and presented a simple pass/no-pass functionality.

97 MATHEMATICS AND COMPUTING↗

Computing Relative Joint Positions of Robot Arms

Vector-algebra method developed for extracting Denavit-Hartenberg parameters for any assembled robot arm. Method for extracting relative joint geometry of robot arms useful to researchers who need data for existing robot arms for either validation of mathematical models or for studies involving actual control of these devices. Method, does not require robot arm to be disassembled, also useful in recalibration of misalined or bent robot arm and becomes useful industrial procedure. Merit of method is errors not propagated.

Barker, L. K.↗

Balanced Placement Of Vibration Sensors And Actuators

Mathematical approach that involves Hankel singular values leads to method for estimation of optimal placement of relatively few vibration sensors and actuators in multivariable flexible structure. Approach extends and complements previous developments regarding approximate decomposition, to Hankel singular values, of singular values of controllability and observability grammian matrices of multivariable flexible structure. Mathematical constructs also described in "Designing An Approximately Balanced LQG Compensator" (NPO-19000).

Gawronski, Wodek↗

Universal Method of Modeling Linear Stationary Physical Fields

The aim of this paper is to develop a method, described earlier, of solving quantum-mechanical problems into a universal numerical method of modeling fields of various physical nature. This method is based on reducing the initial equation of mathematical physics describing a given physical field to a simpler inhomogeneous equation with a known fundamental solution. This equation is then transformed into an inhomogeneous integral equation with a kernel expressed in terms of the known fundamental solution. The obtained integral equation with boundary conditions is solved numerically. To confirm the efficiency of the proposed numerical method, a two-dimensional and a three-dimensional boundary value problem with known solutions have been solved. Another important illustration of the efficiency of the proposed method is the solution of quantum-mechanical problems for one-dimensional and two-dimensional quantum oscillators. It is shown that the considered method allows one to find the energy eigenvalues and the eigenfunctions with acceptable accuracy.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Adaptive-in-temperature method for fast on-the-fly sampling of thermal neutron scattering data in MCNP6 [Slides]

The project objective and motivation is to develop thermal data libraries for selected isotopes in MCNP6 to support on-the-fly S(alpha, beta) sampling for temperature ranges applicable to nuclear criticality safety, thereby enhancing the physics treatment in MCNP6 so that it can perform fast on-the-fly sampling of S(alpha, beta) data at arbitrary temperature.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Sensitivity Calculations for Systems with Polyethylene Reflector Materials Using CLUTCH [Slides]

CLUTCH is a CE TSUNAMI method that uses a single forward calculation to determine sensitivities. An F*(r) function provides the importance of each voxel in a mesh over all regions where fission can occur. A sufficient number of fissions must be simulated in each voxel in which fission is possible to generate an accurate estimate of the importance of a fission in that voxel.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Sensitivity/Uncertainty Comparison Study: Oak Ridge National Laboratory Results

Various methods and tools have been developed over the years to assist Nuclear Criticality Safety practitioners in determining a safe upper subcritical limit (USL) for an application of interest. The Nuclear Criticality Safety Program has funded a task to compare calculated USL methods developed at three laboratories—Oak Ridge National Laboratory (ORNL), Los Alamos National Laboratory (LANL), and the Institute for Radiological Protection and Nuclear Safety (IRSN)—on a small set of benchmark problems. The purpose of this paper is to present the ORNL results using the Tools for Sensitivity Uncertainty Analysis Methodology Implementation (TSUNAMI) from the SCALE 6.2.3 code suite.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Solving Graph Laplacian Systems Through Recursive Bisections and Two-Grid Preconditioning

We present a parallelizable direct method for computing the solution to graph Laplacian-based linear systems derived from graphs that can be hierarchically bipartitioned with small edge cuts. For a graph of size n with constant-size edge cuts, our method decomposes a graph Laplacian in time O(n log n), and then uses that decomposition to perform a linear solve in time O(n log n). We then use the developed technique to design a preconditioner for graph Laplacians that do not have this property. Finally, we augment this preconditioner with a two-grid method that accounts for much of the preconditioner's weaknesses. We present an analysis of this method, as well as a general theorem for the condition number of a general class of two-grid support graph-based preconditioners. Numerical experiments illustrate the performance of the studied methods.

97 MATHEMATICS AND COMPUTING↗