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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,531 records · Page 85

Accurate and rapid acoustic damage characterization in complex structures using sparse sensor networks and deep learning models

Damage diagnosis in critical components is essential for ensuring the safety and reliability of operations across industries, spanning manufacturing, aerospace, and energy. Traditional acoustic nondestructive testing methods primarily focus on detecting defects through the direct scattering of single-mode incident waves from the damage, which limit their applicability to simple structures and small inspection areas. Our earlier research demonstrated that machine learning algorithms combined with sparse sensor networks can identify critical defect signatures even from multiply scattered, multi-mode acoustic signals, indicating the potential for improved defect inspection in complex, real-world structures. In this work, we demonstrate the successful implementation of this approach in a fixed sensor configuration to rapidly and accurately detect simulated defects in a geometrically complex, real-world structure, a brake rotor hub. Three different types of defects were physically simulated on the surface of the hub, and the collected data were used to train an autoencoder-based deep learning model. Two models were tested, one using single measurements and the other using multiple measurements taking advantage of the spatial distribution of the sensor network. After training, the multi-measurement model achieved 100 % accuracy in identifying, classifying, and locating unseen, unique damages. This work illustrates the potential of the proposed method for a wide range of industrial applications.

36 MATERIALS SCIENCE↗

CYPminer: an automated cytochrome P450 identification, classification, and data analysis tool for genome data sets across kingdoms

Background: Cytochrome P450 monooxygenases (termed CYPs or P450s) are hemoproteins ubiquitously found across all kingdoms, playing a central role in intracellular metabolism, especially in metabolism of drugs and xenobiotics. The explosive growth of genome sequencing brings a new set of challenges and issues for researchers, such as a systematic investigation of CYPs across all kingdoms in terms of identification, classification, and pan-CYPome analyses. Such investigation requires an automated tool that can handle an enormous amount of sequencing data in a timely manner. Results: CYPminer was developed in the Python language to facilitate rapid, comprehensive analysis of CYPs from genomes of all kingdoms. CYPminer consists of two procedures i) to generate the Genome-CYP Matrix (GCM) that lists all occurrences of CYPs across the genomes, and ii) to perform analyses and visualization of the GCM, including pan-CYPomes (pan- and core-CYPome), CYP co-occurrence networks, CYP clouds, and genome clustering data. The performance of CYPminer was evaluated with three datasets from fungal and bacterial genome sequences. Conclusions: CYPminer completes CYP analyses for large-scale genomes from all kingdoms, which allows systematic genome annotation and comparative insights for CYPs. CYPminer also can be extended and adapted easily for broader usage.

59 BASIC BIOLOGICAL SCIENCES↗

Ps and Qs: Quantization-Aware Pruning for Efficient Low Latency Neural Network Inference

Efficient machine learning implementations optimized for inference in hardware have wide-ranging benefits, depending on the application, from lower inference latency to higher data throughput and reduced energy consumption. Two popular techniques for reducing computation in neural networks are pruning, removing insignificant synapses, and quantization, reducing the precision of the calculations. In this work, we explore the interplay between pruning and quantization during the training of neural networks for ultra low latency applications targeting high energy physics use cases. Techniques developed for this study have potential applications across many other domains. We study various configurations of pruning during quantization-aware training, which we term quantization-aware pruning, and the effect of techniques like regularization, batch normalization, and different pruning schemes on performance, computational complexity, and information content metrics. We find that quantization-aware pruning yields more computationally efficient models than either pruning or quantization alone for our task. Further, quantization-aware pruning typically performs similar to or better in terms of computational efficiency compared to other neural architecture search techniques like Bayesian optimization. Surprisingly, while networks with different training configurations can have similar performance for the benchmark application, the information content in the network can vary significantly, affecting its generalizability.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

The emergence of microbiome centres

As microbiome science expands, academic centres scramble to fill many needs, from service provider to industry liaison. This newly created network aims to share strategies and accelerate knowledge transfer, and invites others to join the efforts.

59 BASIC BIOLOGICAL SCIENCES↗

Long-Lasting Science Returns from the Apollo Heat Flow Experiments

The Apollo astronauts deployed geothermal heat flow instruments at landing sites 15 and 17 as part of the Apollo Lunar Surface Experiments Packages (ALSEP) in July 1971 and December 1972, respectively. These instruments continuously transmitted data to the Earth until September 1977. Four decades later, the data from the two Apollo sites remain the only set of in-situ heat flow measurements obtained on an extra-terrestrial body. Researchers continue to extract additional knowledge from this dataset by utilizing new analytical techniques and by synthesizing it with data from more recent lunar orbital missions such as the Lunar Reconnaissance Orbiter. In addition, lessons learned from the Apollo experiments help contemporary researchers in designing heat flow instruments for future missions to the Moon and other planetary bodies. For example, the data from both Apollo sites showed gradual warming trends in the subsurface from 1971 to 1977. The cause of this warming has been debated in recent years. It may have resulted from fluctuation in insolation associated with the 18.6-year-cycle precession of the Moon, or sudden changes in surface thermal environment/properties resulting from the installation of the instruments and the astronauts' activities. These types of reanalyses of the Apollo data have lead a panel of scientists to recommend that a heat flow probe carried on a future lunar mission reach 3 m into the subsurface, approx 0.6 m deeper than the depths reached by the Apollo 17 experiment. This presentation describes the authors current efforts for (1) restoring a part of the Apollo heat flow data that were left unprocessed by the original investigators and (2) designing a compact heat flow instrument for future robotic missions to the Moon. First, at the conclusion of the ALSEP program in 1977, heat flow data obtained at the two Apollo sites after December 1974 were left unprocessed and not properly archived through NASA. In the following decades, heat flow data from January 1975 through February 1976, as well as the metadata necessary for processing the data (the data reduction algorithm, instrument calibration data, etc.), were somehow lost. In 2010, we located 450 original master archival tapes of unprocessed data from all the ALSEP instruments for a period of April through June 1975 at the Washington National Records Center. We are currently extracting the heat flow data packets from these tapes and processing them. Second, on future lunar missions, heat flow probes will likely be deployed by a network of small robotic landers, as recommended by the latest Decadal Survey of the National Academy of Science. In such a scenario, the heat flow probe must be a compact system, and that precludes use of heavy excavation equipment such as a rotary drill for reaching the 3-m target depth. The new heat flow system under development uses a pneumatically driven penetrator. It utilizes a stem that winds out of a reel and pushes its conical tip into the regolith. Simultaneously, gas jets, emitted from the cone tip, loosen and blow away the soil. Lab experiments have demonstrated its effectiveness in lunar vacuum.

Nagihara, S.↗

Explainable machine learning in materials science

Abstract Machine learning models are increasingly used in materials studies because of their exceptional accuracy. However, the most accurate machine learning models are usually difficult to explain. Remedies to this problem lie in explainable artificial intelligence (XAI), an emerging research field that addresses the explainability of complicated machine learning models like deep neural networks (DNNs). This article attempts to provide an entry point to XAI for materials scientists. Concepts are defined to clarify what explain means in the context of materials science. Example works are reviewed to show how XAI helps materials science research. Challenges and opportunities are also discussed.

36 MATERIALS SCIENCE↗

Science-based Region-of-Interest Image Compression

As the number of currently active space missions increases, so does competition for Deep Space Network (DSN) resources. Even given unbounded DSN time, power and weight constraints onboard the spacecraft limit the maximum possible data transmission rate. These factors highlight a critical need for very effective data compression schemes. Images tend to be the most bandwidth-intensive data, so image compression methods are particularly valuable. In this paper, we describe a method for prioritizing regions in an image based on their scientific value. Using a wavelet compression method that can incorporate priority information, we ensure that the highest priority regions are transmitted with the highest fidelity.

Wagstaff, K. L.↗

Differential Etv2 threshold requirement for endothelial and erythropoietic development

Endothelial and erythropoietic lineages arise from a common developmental progenitor. Etv2 is a master transcriptional regulator required for the development of both lineages. However, the mechanisms through which Etv2 initiates the gene-regulatory networks (GRNs) for endothelial and erythropoietic specification and how the two GRNs diverge downstream of Etv2 remain incompletely understood. Here, by analyzing a hypomorphic Etv2 mutant, we demonstrate different threshold requirements for initiation of the downstream GRNs for endothelial and erythropoietic development. We show that Etv2 functions directly in a coherent feedforward transcriptional network for vascular endothelial development, and a low level of Etv2 expression is sufficient to induce and sustain the endothelial GRN. In contrast, Etv2 induces the erythropoietic GRN indirectly via activation of Tal1, which requires a significantly higher threshold of Etv2 to initiate and sustain erythropoietic development. These results provide important mechanistic insight into the divergence of the endothelial and erythropoietic lineages.

59 BASIC BIOLOGICAL SCIENCES↗

Marshall Space Flight Center Faculty Fellowship Program

The 2018 Marshall Faculty Fellowship Program involved 16 faculty in the laboratories and departments at Marshall Space Flight Center. These faculty engineers and scientists worked with NASA collaborators on NASA projects, bringing new perspectives and solutions to bear. This Technical Memorandum is a compilation of the research reports of the 2018 Marshall Faculty Fellowship program, along with the Program Announcement (Appendix A) and the Program Description (Appendix B). The research affected the following five areas: (1) Materials (2) Propulsion (3) Spacecraft systems (4) Vehicle systems (5) Space science The materials investigations includes Lunar Regolith for habitats, friction stir welding, and composite joints. Propulsion studies included cryogenic tank pressurization, transmitted torque in a cryogenic environment, and condensation in presence of noncondensables, Europa Lander Deorbit Stage, and catalyst development for a hybrid rocket. Spacecraft systems include wireless sensor networks and printed electronic inks. Vehicle systems studies were performed on Mars ascent vehicle analysis, architecture models, and Space Launch System manual steering. Space science studies included planetary lava flow. Our goal is to continue the Marshall Faculty Fellowship Program funded by Center internal project offices. Faculty Fellows in this 2018 program represented the following minority-serving institutions: Alabama A&M University, Southern University, Delgado Community College, and Dillard University.

Six, N. F.↗

Wild Isolates of Neurospora crassa Reveal Three Conidiophore Architectural Phenotypes

The vegetative life cycle in the model filamentous fungus, Neurospora crassa, relies on the development of conidiophores to produce new spores. Environmental, temporal, and genetic components of conidiophore development have been well characterized; however, little is known about their morphological variation. We explored conidiophore architectural variation in a natural population using a wild population collection of 21 strains from Louisiana, United States of America (USA). Our work reveals three novel architectural phenotypes, Wild Type, Bulky, and Wrap, and shows their maintenance throughout the duration of conidiophore development. Furthermore, we present a novel image-classifier using a convolutional neural network specifically developed to assign conidiophore architectural phenotypes in a high-throughput manner. To estimate an inheritance model for this discrete complex trait, crosses between strains of each phenotype were conducted, and conidiophores of subsequent progeny were characterized using the trained classifier. Our model suggests that conidiophore architecture is controlled by at least two genes and has a heritability of 0.23. Additionally, we quantified the number of conidia produced by each conidiophore type and their dispersion distance, suggesting that conidiophore architectural phenotype may impact N. crassa colonization capacity.

59 BASIC BIOLOGICAL SCIENCES↗

Implementation of an Antenna Array Signal Processing Breadboard for the Deep Space Network

The Deep Space Network Large Array will replace/augment 34 and 70 meter antenna assets. The array will mainly be used to support NASA's deep space telemetry, radio science, and navigation requirements. The array project will deploy three complexes in the western U.S., Australia, and European longitude each with 400 12m downlink antennas and a DSN central facility at JPL. THis facility will remotely conduct all real-time monitor and control for the network. Signal processing objectives include: provide a means to evaluate the performance of the Breadboard Array's antenna subsystem; design and build prototype hardware; demonstrate and evaluate proposed signal processing techniques; and gain experience with various technologies that may be used in the Large Array. Results are summarized..

array↗

Engineering regulatory networks for complex phenotypes in E. coli

Regulatory networks describe the hierarchical relationship between transcription factors, associated proteins, and their target genes. Regulatory networks respond to environmental and genetic perturbations by reprogramming cellular metabolism. Here we design, construct, and map a comprehensive regulatory network library containing 110,120 specific mutations in 82 regulators expected to perturb metabolism. We screen the library for different targeted phenotypes, and identify mutants that confer strong resistance to various inhibitors, and/or enhanced production of target compounds. These improvements are identified in a single round of selection, showing that the regulatory network library is universally applicable and is convenient and effective for engineering targeted phenotypes. The facile construction and mapping of the regulatory network library provides a path for developing a more detailed understanding of global regulation in E. coli , with potential for adaptation and use in less-understood organisms, expanding toolkits for future strain engineering, synthetic biology, and broader efforts.

59 BASIC BIOLOGICAL SCIENCES↗

Pickaxe: a Python library for the prediction of novel metabolic reactions

Abstract Background Biochemical reaction prediction tools leverage enzymatic promiscuity rules to generate reaction networks containing novel compounds and reactions. The resulting reaction networks can be used for multiple applications such as designing novel biosynthetic pathways and annotating untargeted metabolomics data. It is vital for these tools to provide a robust, user-friendly method to generate networks for a given application. However, existing tools lack the flexibility to easily generate networks that are tailor-fit for a user’s application due to lack of exhaustive reaction rules, restriction to pre-computed networks, and difficulty in using the software due to lack of documentation. Results Here we present Pickaxe, an open-source, flexible software that provides a user-friendly method to generate novel reaction networks. This software iteratively applies reaction rules to a set of metabolites to generate novel reactions. Users can select rules from the prepackaged JN1224min ruleset, derived from MetaCyc, or define their own custom rules. Additionally, filters are provided which allow for the pruning of a network on-the-fly based on compound and reaction properties. The filters include chemical similarity to target molecules, metabolomics, thermodynamics, and reaction feasibility filters. Example applications are given to highlight the capabilities of Pickaxe: the expansion of common biological databases with novel reactions, the generation of industrially useful chemicals from a yeast metabolome database, and the annotation of untargeted metabolomics peaks from an E. coli dataset. Conclusion Pickaxe predicts novel metabolic reactions and compounds, which can be used for a variety of applications. This software is open-source and available as part of the MINE Database python package ( https://pypi.org/project/minedatabase/ ) or on GitHub ( https://github.com/tyo-nu/MINE-Database ). Documentation and examples can be found on Read the Docs ( https://mine-database.readthedocs.io/en/latest/ ). Through its documentation, pre-packaged features, and customizable nature, Pickaxe allows users to generate novel reaction networks tailored to their application.

59 BASIC BIOLOGICAL SCIENCES↗

(abstract) Space Science with Commercial Funding

The world-wide recession, and other factors, have led to reduced or flat budgets in real terms for space agencies around the world. Consequently space science projects and proposals have been under pressure and seemingly will continue to be pressured for some years into the future. A new concept for space science funding is underway at JPL. A partnership has been arranged with a commercial, for-profit, company that proposes to implement a (bandwidth-on-demand) information and telephone system through a network of low earth orbiting satellites (LEO). This network will consist of almost 1000 satellites operating in polar orbit at Ka-band. JPL has negotiated an agreement with this company that each satellite will also carry one or more science instruments for astrophysics, astronomy, and for earth observations. This paper discussed the details of the arrangement and the financial arrangements. It describes the technical parameters, such as the 60 GHz wideband inter-satellite links and the frequency, time, and position control, on which the science is based, and it also discusses the complementarity of this commercially funded space science with conventional space science.

observations↗

Tailoring Lifetimes and Properties of Carbodiimide-Fueled Covalently Cross-linked Polymer Networks

The mechanical properties of nonequilibrium polymer hydrogels obtained from the transient cross-linking of polymer chains by a chemical fuel were investigated. Aqueous polymers featuring pendant carboxylic acids were treated with a carbodiimide to give anhydride-cross-linked gels. The anhydrides spontaneously hydrolyze back to the polymer solution, and the cycle can be repeated multiple times. Oscillatory rheology was employed to study the effects of temperature, fuel concentration, chain length, and polymer composition on the storage and loss moduli of the polymeric materials as well as the time taken for the polymers to undergo decross-linking. Regardless of the temperature used, at constant carbodiimide concentration, degelation times are more sensitive to experimental temperature than are the peak storage moduli. Decross-linking times decrease with increasing temperature. As carbodiimide concentration decreases, there is a decrease in moduli and decross-linking times. Within the scope of materials studied, the polymer structure was found to have a relatively small impact on the transient properties of gel networks compared to the fuel concentration and temperature. Furthermore, these findings facilitate the design of tunable on-demand networks and gels.

36 MATERIALS SCIENCE↗

Organic Matrix Derived from Host–Microbe Interplay Contributes to Pathological Renal Biomineralization

Matrix stones are a rare form of kidney stones. They feature a high percentage of hydrogel-like organic matter, and their formation is closely associated with urinary tract infections. Herein, comprehensive materials and biochemical approaches were taken to map the organic-inorganic interface and gather insights into the host-microbe interplay in pathological renal biomineralization. Surgically extracted soft and slimy matrix stones were examined using micro-X-ray computed tomography and various microspectroscopy techniques. Higher-mineral-density laminae were positive for calcium-bound Alizarin red. Lower-mineral-density laminae revealed periodic acid-Schiff-positive organic filamentous networks of varied thickness. These organic filamentous networks, which featured a high polysaccharide content, were enriched with zinc, carbon, and sulfur elements. Neutrophil extracellular traps (NETs) along with immune response-related proteins, including calprotectin, myeloperoxidase, CD63, and CD86, also were identified in the filamentous networks. Expressions of NETs and upregulation of polysaccharide-rich mucin secretion are proposed as a part of the host immune defense to "trap" pathogens. These host-microbe derived organic matrices can facilitate heterogeneous nucleation and precipitation of inorganic particulates, resulting in macroscale aggregates known as "matrix stones". These insights into the plausible aggregation of constituents through host-microbe interplay underscore the unique "double-edged sword" effect of the host immune response to pathogens and the resulting renal biominerals.

59 BASIC BIOLOGICAL SCIENCES↗

Towards Cross-Facility Workflows Orchestration through Distributed Automation

Modern science relies on end-to-end workflows that incorporate experimental instruments and utilize edge, cloud, or high-performance computing and storage resources. These components are geographically dispersed across various user facilities and interconnected through high-speed networks. In this paper, we present Zambeze, an automated distributed framework designed to facilitate this new class of cross-facility workflows. Utilizing swarm intelligence principles, Zambeze orchestrates science campaigns by managing distributed autonomous agents. These agents can offer a suite of services, including computing, storage, and data management. We demonstrate the feasibility of Zambeze through a real-world application involving electron microscopy, enhanced with Artificial Intelligence capabilities.

Skluzacek, Tyler↗

Expediting DECam Multimessenger Counterpart Searches with Convolutional Neural Networks

Searches for counterparts to multimessenger events with optical imagers use difference imaging to detect new transient sources. However, even with existing artifact-detection algorithms, this process simultaneously returns several classes of false positives: false detections from poor-quality image subtractions, false detections from low signal-to-noise images, and detections of preexisting variable sources. Currently, human visual inspection to remove the false positives is a central part of multimessenger follow-up observations, but when next generation gravitational wave and neutrino detectors come online and increase the rate of multimessenger events, the visual inspection process will be prohibitively expensive. We approach this problem with two convolutional neural networks operating on the difference imaging outputs. The first network focuses on removing false detections and demonstrates an accuracy of 92% on our data set. The second network focuses on sorting all real detections by the probability of being a transient source within a host galaxy and distinguishes between various classes of images that previously required additional human inspection. We find the number of images requiring human inspection will decrease by a factor of 1.5 using our approach alone and a factor of 3.6 using our approach in combination with existing algorithms, facilitating rapid multimessenger counterpart identification by the astronomical community.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗