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At least 1,531 records · Page 85
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Toward designing effective exascale scientific computing workflows: experiences and best practices

Many fields within scientific computing have embraced advances in big-data analysis and machine learning, which often requires the deployment of large, distributed and complicated workflows that may combine training neural networks, performing simulations, running inference, and performing database queries and data analysis in asynchronous, parallel and pipelined execution frameworks. Such a shift has brought into focus the need for scalable, efficient workflow management solutions with reproducibility, error and provenance handling, traceability, and checkpoint-restart capabilities, among other needs. Here, we discuss challenges and best-practices for deploying exascale-generation computational science workflows on resources at the Oak Ridge Leadership Computing Facility (OLCF). We present our experiences with large-scale deployment of distributed workflows on the Summit supercomputer, including for bioinformatics and computational biophysics, materials science, and deep learning model optimization. We also present problems and solutions created by working within a Python-centric software base on traditional HPC systems, and discuss steps that will be required before the convergence of HPC, AI, and data science can be fully realized. Our results point to a wealth of exciting new possibilities for harnessing this convergence to tackle new scientific challenges.

Coletti, Mark↗
DOE OSTI2022

Integrating tactical planning, operational planning and scheduling using data-driven feasibility analysis

Supply chain operations and scheduling are well-studied problems in the literature. Although these problems are related, they are often solved sequentially. This uncoordinated approach usually leads to sub-optimal solutions. Here this paper proposes a methodology for integrating scheduling operations into the supply chain network, motivated by the available enterprise data, and feasibility analysis. Existing literature on integrated models for addressing the supply chain is reviewed and classified. Then the mathematical model formulation for each level is discussed, after which the proposed data-driven integrated framework is described. The methodology is tested on two different case studies of varying dimensions. For each case study, the solution solves a multi-objective problem with the overall aim of an optimal solution that is robust towards achieving optimal cost while keeping customer satisfaction in mind.

42 ENGINEERING↗
DOE OSTI2024

SBND Analysis using ML Reconstruction Chain

As part of the Short Baseline Neutrino (SBN) Program at Fermilab, the Short Baseline Near Detector (SBND) is positioned in the Booster Neutrino Beam (BNB) and explores neutrino-argon interactions with unprecedented statistics. SBND is a Liquid Argon Time Projection Chamber (LArTPC). Electrons produced through ionization drift toward three wire planes, providing signals that form 2D images of particle trajectories. I introduce the Scalable Particle Imaging using Neural Embeddings (SPINE) framework, which employs a Machine Learning (ML)-based 3D reconstruction using a series of neural networks. Here, we present SPINE’s reconstruction chain, analysis approaches, and results from our latest simulation samples.

43 PARTICLE ACCELERATORS↗
NASA NTRSDate not supplied

Statistical learning framework for safety and failure analysis of a DNN-based autonomous aircraft system

Deep Neural Networks (DNNs) and Machine Learning technology is increasingly used for safety-critical applications in the Aerospace domain. To ensure safe operations, the DNN and the system must undergo rigorous verification and validation, including advanced statistical analyses. Performance and safety of the DNN and system behavior must not only be analyzed for the nominal case, but under numerous off-nominal and failure cases. In this paper we will describe how our statistical learning framework SYSAI can efficiently perform such analyses using the tool’s unique combination of advanced learning modeling and statistical analysis techniques. SYSAI can effectively explore the high-dimensional state and failure space of the system under test; geometrical shape detection of safety regions and boundaries support explainability of the results to the designer. In this paper, we report experiments and results obtained with a vision-based DNN control system (ACT) that is capable of autonomously steering an aircraft down a runway.

Yuning He↗
NASA NTRS0202

Rest architecture for link analysis tools portal

A web portal is under development to improve overall services provided by NASA networks that support near-­‐Earth missions. These networks are managed by Space Communication and Navigation (SCaN) Program of NASA and include the following: Deep Space Network (DSN), Space Network (SN), and Near-­‐Earth Network (NEN). DSN is a network of antennas located in three longitudinally separated sites and supports interplanetary spacecraft missions, radio science, and radar astronomy observations. SN consists of a number of geostationary Tracking and Data Relay Satellites (TDRS) and associated ground stations. NEN consists of both NASA-­‐owned ground stations and those owned by international, commercial, and academic partners. This study investigates different web access techniques for mission users to use link analysis tools that aid in operating NASA networks. We developed a web portal prototype following principles of Representational state transfer (REST) architecture to leverage scalability, independent deployment of tools, and generic interfaces. In REST architectures, requests and responses between clients and servers are built around transferring representations of resources that can be addressed in memory. We demonstrate the feasibility of using REST architecture to facilitate web-­‐service transactions via web-­‐portal.

Lee, Carlyn-­‐Ann↗
NASA NTRS1986

The study of microstrip antenna arrays and related problems

In February, an initial computer program to be used in analyzing the four-element array module was completed. This program performs the analysis of modules composed of four rectangular patches which are corporately fed by a microstrip line network terminated in four identical load impedances. Currently, a rigorous full-wave analysis of various types of microstrip line feed structures and patches is being performed. These tests include the microstrip line feed between layers of different electrical parameters. A method of moments was implemented for the case of a single dielectric layer and microstrip line fed rectangular patches in which the primary source is assumed to be a magnetic current ribbon across the line some distance from the patch. Measured values are compared with those computed by the program.

Lo, Y. T.↗
NASA NTRS1991

Electrification in winter storms and the analysis of thunderstorm overflight

The emergence of 24 hr operational lightning detection networks has led to the finding that positive lightning strokes, although still much fewer in number than the normal negative strokes, are present in summer and winter storms. Recent papers address the importance of understanding the meteorological conditions which lead to a dominance of one polarity of stroke over another; the appearance of positive strokes at the end of a storm appeared to presage the end-of-storm downdraft and subsidence leading to downburst activity. It is beginning to appear that positive strokes may be important meteorological indicators. Significant research accomplishments on the following topics are addressed: (1) a study to verify that the black boxes used in the lightning networks to detect both negative and positive strokes to ground were accurate; (2) the use of slow tails to determine the polarity of distant lightning; (3) lightning initiation in winter vs. summer storms; (4) the upgrade of sensors for the measurement of electric field signals associated with lightning; (5) the analysis of lightning flash records from storms between 40 and 125 km from the sensor; and (6) an interesting aspect of the initiation process which involves the physical processes driving the stepped leader. The focus of current research and future research plans are presented.

Brook, Marx↗
NASA NTRS2000

Demonstration of Cost-Effective, High-Performance Computing at Performance and Reliability Levels Equivalent to a 1994 Vector Supercomputer

The Affordable High Performance Computing (AHPC) project demonstrated that high-performance computing based on a distributed network of computer workstations is a cost-effective alternative to vector supercomputers for running CPU and memory intensive design and analysis tools. The AHPC project created an integrated system called a Network Supercomputer. By connecting computer work-stations through a network and utilizing the workstations when they are idle, the resulting distributed-workstation environment has the same performance and reliability levels as the Cray C90 vector Supercomputer at less than 25 percent of the C90 cost. In fact, the cost comparison between a Cray C90 Supercomputer and Sun workstations showed that the number of distributed networked workstations equivalent to a C90 costs approximately 8 percent of the C90.

Babrauckas, Theresa↗
NASA NTRS1994

Statistic analysis of annual total ozone extremes for the period 1964-1988

Annual extremes of total column amount of ozone (in the period 1964-1988) from a network of 29 Dobson stations have been examined using the extreme value analysis. The extremes have been calculated as the highest deviation of daily mean total ozone from its long-term monthly mean, normalized by the monthly standard deviations. The extremes have been selected from the direct-Sun total ozone observations only. The extremes resulting from abrupt changes in ozone (day to day changes greater than 20 percent) have not been considered. The ordered extremes (maxima in ascending way, minima in descending way) have been fitted to one of three forms of the Fisher-Tippet extreme value distribution by the nonlinear least square method (Levenberg-Marguard method). We have found that the ordered extremes from a majority of Dobson stations lie close to Fisher-Tippet type III. The extreme value analysis of the composite annual extremes (combined from averages of the annual extremes selected at individual stations) has shown that the composite maxima are fitted by the Fisher-Tippet type III and the composite minima by the Fisher-Tippet type I. The difference between the Fisher-Tippet types of the composite extremes seems to be related to the ozone downward trend. Extreme value prognoses for the period 1964-2014 (derived from the data taken at: all analyzed stations, the North American, and the European stations) have revealed that the prognostic extremes are close to the largest annual extremes in the period 1964-1988 and there are only small regional differences in the prognoses.

Krzyscin, Janusz W.↗
DOE OSTI2021

Exploration of multifidelity UQ sampling strategies for computer network applications.

Network modeling is a powerful tool to enable rapid analysis of complex systems that can be challenging to study directly using physical testing. Here, two approaches are considered: emulation and simulation. The former runs real software on virtualized hardware, while the latter mimics the behavior of network components and their interactions in software. Although emulation provides an accurate representation of physical networks, this approach alone cannot guarantee the characterization of the system under realistic operative conditions. Operative conditions for physical networks are often characterized by intrinsic variability (payload size, packet latency, etc.) or a lack of precise knowledge regarding the network configuration (bandwidth, delays, etc.); therefore uncertainty quantification (UQ) strategies should be also employed. UQ strategies require multiple evaluations of the system with a number of evaluation instances that roughly increases with the problem dimensionality, i.e., the number of uncertain parameters. It follows that a typical UQ workflow for network modeling based on emulation can easily become unattainable due to its prohibitive computational cost. In this paper, a multifidelity sampling approach is discussed and applied to network modeling problems. The main idea is to optimally fuse information coming from simulations, which are a low-fidelity version of the emulation problem of interest, in order to decrease the estimator variance. By reducing the estimator variance in a sampling approach it is usually possible to obtain more reliable statistics and therefore a more reliable system characterization. Several network problems of increasing difficulty are presented. For each of them, the performance of the multifidelity estimator is compared with respect to the single fidelity counterpart, namely, Monte Carlo sampling. For all the test problems studied in this work, the multifidelity estimator demonstrated an increased efficiency with respect to MC.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2024

Investigating the impacts of solid phase extraction on dissolved organic matter optical signatures and the pairing with high‐resolution mass spectrometry data across a freshwater stream network

Abstract Advancing our understanding of dissolved organic matter (DOM) chemistry in aquatic systems necessitates the integration of data streams from multiple analytical platforms. Some measurements require pretreatment with solid phase extraction (SPE), while others are performed directly on whole water samples. Evidence has suggested that SPE will be biased against select DOM fractions, leading to concerns over the ability to establish data linkages across platforms with variable needs for SPE pretreatment, such as those from optical measurements and those that provide high‐resolution molecular information. Here, we directly addressed this concern by assessing the impact of SPE on DOM optical properties through excitation–emission matrices with parallel factor analysis (PARAFAC) for 47 samples across a stream network within a single watershed reflective of variable DOM sources. PARAFAC data was further paired with molecular information obtained by Fourier transform ion cyclotron resonance mass spectrometry (FTICR‐MS). A comparison of PARAFAC models first revealed no systematic qualitative differences in major components between whole water DOM and DOM isolated by SPE (SPE‐DOM); however, quantitative biases against select components were observed. Further linkages with FTICR‐MS data revealed that the molecular fingerprint associated with each PARAFAC component was consistent between the whole water DOM and SPE‐DOM. Our results suggest that bulk scale linkages across these analytical platforms could be inferred irrespective of the observed quantitative biases resulting from SPE for samples within this example watershed. This work represents a key step toward the systematic evaluation of linkages between optical and high‐resolution mass spectrometry datasets in freshwater lotic environments.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2026

Comparability of Liquid Chromatography Tandem Mass Spectrometry Analysis of Dissolved Organic Matter across Laboratories

Non-targeted liquid chromatography tandem highresolution mass spectrometry (LC−MS/MS) is increasingly applied for the structure-resolved chemical analysis of dissolved organic matter (DOM). With new developments in MS instrumentation and analysis software, the approach has gained substantial momentum over the past decade. However, achieving high-quality analytical data that is reproducible and comparable across laboratories can be a bottleneck in non-targeted metabolomics and organic matter chemical analysis, especially for data reuse in repository-scale analyses. Understanding the capabilities as well as challenges of comparing LC−MS/MS data from different laboratories is necessary for inferring global trends from public data sets. To illuminate instrumentation factors that drive differences and variability, we used a standardized data analysis pipeline, including classical (CMN) and featurebased molecular networking (FBMN), to analyze data from a ring trial by 24 laboratories on identical sample sets of algal and DOM extracts that were mixed in predefined concentrations and spiked with standards. Our results showed that data sets from similar mass spectrometer types with unified instrument parameters were qualitatively comparable, resolving the same general trends and shared mass spectral features. Interlaboratory comparability was best for high-intensity features, while low-intensity features showed greater detection variability. Our analysis also highlights challenges when comparing data from instruments with different acquisition rates or operating with less standardized methods. Lastly, we provide recommendations for data integration, public data sharing, standardization, and best practices for standardized LC−MS/MS data acquisition, which will be critical for long-term time series and intercomparability of DOM chemical analyses.

DOM↗
NASA NTRS2003

Modeling beta-adrenergic control of cardiac myocyte contractility in silico

The beta-adrenergic signaling pathway regulates cardiac myocyte contractility through a combination of feedforward and feedback mechanisms. We used systems analysis to investigate how the components and topology of this signaling network permit neurohormonal control of excitation-contraction coupling in the rat ventricular myocyte. A kinetic model integrating beta-adrenergic signaling with excitation-contraction coupling was formulated, and each subsystem was validated with independent biochemical and physiological measurements. Model analysis was used to investigate quantitatively the effects of specific molecular perturbations. 3-Fold overexpression of adenylyl cyclase in the model allowed an 85% higher rate of cyclic AMP synthesis than an equivalent overexpression of beta 1-adrenergic receptor, and manipulating the affinity of Gs alpha for adenylyl cyclase was a more potent regulator of cyclic AMP production. The model predicted that less than 40% of adenylyl cyclase molecules may be stimulated under maximal receptor activation, and an experimental protocol is suggested for validating this prediction. The model also predicted that the endogenous heat-stable protein kinase inhibitor may enhance basal cyclic AMP buffering by 68% and increasing the apparent Hill coefficient of protein kinase A activation from 1.0 to 2.0. Finally, phosphorylation of the L-type calcium channel and phospholamban were found sufficient to predict the dominant changes in myocyte contractility, including a 2.6x increase in systolic calcium (inotropy) and a 28% decrease in calcium half-relaxation time (lusitropy). By performing systems analysis, the consequences of molecular perturbations in the beta-adrenergic signaling network may be understood within the context of integrative cellular physiology.

Non-NASA Center↗
NASA NTRS2008

Determination of a Limited Scope Network's Lightning Detection Efficiency

This paper outlines a modeling technique to map lightning detection efficiency variations over a region surveyed by a sparse array of ground based detectors. A reliable flash peak current distribution (PCD) for the region serves as the technique's base. This distribution is recast as an event probability distribution function. The technique then uses the PCD together with information regarding: site signal detection thresholds, type of solution algorithm used, and range attenuation; to formulate the probability that a flash at a specified location will yield a solution. Applying this technique to the full region produces detection efficiency contour maps specific to the parameters employed. These contours facilitate a comparative analysis of each parameter's effect on the network's detection efficiency. In an alternate application, this modeling technique gives an estimate of the number, strength, and distribution of events going undetected. This approach leads to a variety of event density contour maps. This application is also illustrated. The technique's base PCD can be empirical or analytical. A process for formulating an empirical PCD specific to the region and network being studied is presented. A new method for producing an analytical representation of the empirical PCD is also introduced.

Rompala, John T.↗
DOE OSTI2026

Enhancing the EVI-X National Framework to Address Emerging Energy Questions

This project advances the state-of-the-art in infrastructure analysis to better inform deployment strategies. It enhances NLR's EVI-X Suite, a set of tools supporting national network planning, local site design, and financial evaluation. These capabilities will position DOE to provide timely analysis and inform the strategic buildout of the national charging network. EVI-X development is closely coordinated with other DOE-funded efforts to ensure consistent, integrated use of key inputs and outputs, including EV adoption scenarios from NLR's TEMPO model.

24 POWER TRANSMISSION AND DISTRIBUTION↗
DOE OSTI2023

Indoor Occupancy Sensing via Networked Nodes (2012–2022): A Review

In the past decade, different sensing mechanisms and algorithms have been developed to detect or estimate indoor occupancy. One of the most recent advancements is using networked sensor nodes to create a more comprehensive occupancy detection system where multiple sensors can identify human presence within more expansive areas while delivering enhanced accuracy compared to a system that relies on stand-alone sensor nodes. The present work reviews the studies from 2012 to 2022 that use networked sensor nodes to detect indoor occupancy, focusing on PIR-based sensors. Methods are compared based on pivotal ADPs that play a significant role in selecting an occupancy detection system for applications such as Health and Safety or occupant comfort. These parameters include accuracy, information requirement, maximum sensor failure and minimum observation rate, and feasible detection area. We briefly describe the overview of occupancy detection criteria used by each study and introduce a metric called “sensor node deployment density” through our analysis. This metric captures the strength of network-level data filtering and fusion algorithms found in the literature. It is hinged on the fact that a robust occupancy estimation algorithm requires a minimal number of nodes to estimate occupancy. This review only focuses on the occupancy estimation models for networked sensor nodes. It thus provides a standardized insight into networked nodes’ occupancy sensing pipelines, which employ data fusion strategies, network-level machine learning algorithms, and occupancy estimation algorithms. This review thus helps determine the suitability of the reviewed methods to a standard set of application areas by analyzing their gaps.

Emad-Ud-Din, Muhammad (ORCID:0000000279515538)↗
NASA NTRS1980

Integrated computer-aided design using minicomputers

Computer-Aided Design/Computer-Aided Manufacturing (CAD/CAM), a highly interactive software, has been implemented on minicomputers at the NASA Langley Research Center. CAD/CAM software integrates many formerly fragmented programs and procedures into one cohesive system; it also includes finite element modeling and analysis, and has been interfaced via a computer network to a relational data base management system and offline plotting devices on mainframe computers. The CAD/CAM software system requires interactive graphics terminals operating at a minimum of 4800 bits/sec transfer rate to a computer. The system is portable and introduces 'interactive graphics', which permits the creation and modification of models interactively. The CAD/CAM system has already produced designs for a large area space platform, a national transonic facility fan blade, and a laminar flow control wind tunnel model. Besides the design/drafting element analysis capability, CAD/CAM provides options to produce an automatic program tooling code to drive a numerically controlled (N/C) machine. Reductions in time for design, engineering, drawing, finite element modeling, and N/C machining will benefit productivity through reduced costs, fewer errors, and a wider range of configuration.

Storaasli, O. O.↗
DOE OSTI2021

REopt ® Lite Overview - Resilience Analysis: Clear Sky Tampa Bay [Slides]

Through the Solar Energy Innovation Network (SEIN), the Clear Sky Tampa Bay team, led by the Tampa Bay Regional Planning Council (TBRPC), developed a toolkit to help local governments prioritize sites for solar photovoltaics (PV) and battery energy storage in the context of resilience and emergency management. At a high level, the Clear Sky Tampa Bay process involves: (1) Identifying sites based on community resilience needs and priorities ("Where do we need a resilient energy solution?"); (2) Screening and prioritizing sites for solar PV and storage suitability based on site conditions and other factors; and (3) Using REopt Lite to screen down-selected facilities to prioritize sites based on resilience project economics. This slide deck focuses on Step 3 above, and provides a general overview of REopt Lite and suggestions and examples tailored to the Clear Sky Tampa Bay team about how to use REopt Lite for additional analysis.

14 SOLAR ENERGY↗