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At least 1,531 records · Page 85

Assembly of Repeat Content Using Next Generation Sequencing Data

Repetitive organisms pose a challenge for short read assembly, and typically only unique regions and repeat regions shorter than the read length, can be accurately assembled. Recently, we have been investigating the use of Pacific Biosciences reads for de novo fungal assembly. We will present an assessment of the quality and degree of repeat reconstruction possible in a fungal genome using long read technology. We will also compare differences in assembly of repeat content using short read and long read technology.

09 BIOMASS FUELS↗

Catalytic conversion of alcohols to hydrocarbons with low benzene content

A method for converting an alcohol to a hydrocarbon fraction having a lowered benzene content, the method comprising: converting said alcohol to a hydrocarbon fraction by contacting said alcohol, under conditions suitable for converting said alcohol to said hydrocarbon fraction, with a metal-loaded zeolite catalyst catalytically active for converting said alcohol to said hydrocarbon fraction, and contacting said hydrocarbon fraction with a benzene alkylation catalyst, under conditions suitable for alkylating benzene, to form alkylated benzene product in said hydrocarbon fraction. Also described is a catalyst composition useful in the method, comprising a mixture of (i) a metal-loaded zeolite catalyst catalytically active for converting said alcohol to said hydrocarbon, and (ii) a benzene alkylation catalyst, in which (i) and (ii) may be in a mixed or separated state. A reactor for housing the catalyst and conducting the reaction is also described.

10 SYNTHETIC FUELS↗

Catalytic conversion of alcohols to hydrocarbons with low benzene content

A method for converting an alcohol to a hydrocarbon fraction having a lowered benzene content, the method comprising: converting said alcohol to a hydrocarbon fraction by contacting said alcohol, under conditions suitable for converting said alcohol to said hydrocarbon fraction, with a metal-loaded zeolite catalyst catalytically active for converting said alcohol to said hydrocarbon fraction, and contacting said hydrocarbon fraction with a benzene alkylation catalyst, under conditions suitable for alkylating benzene, to form alkylated benzene product in said hydrocarbon fraction. Also described is a catalyst composition useful in the method, comprising a mixture of (i) a metal-loaded zeolite catalyst catalytically active for converting said alcohol to said hydrocarbon, and (ii) a benzene alkylation catalyst, in which (i) and (ii) may be in a mixed or separated state. A reactor for housing the catalyst and conducting the reaction is also described.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A High Performance Content Based Recommender System Using Hypernym Expansion

There are two major limitations in content-based recommender systems, the first is accurately measuring the similarity of preferred documents to a large set of general documents, and the second is over-specialization which limits the "interesting" documents recommended from a general document set. To address these issues, we propose combining linguistic methods and term frequency methods to improve overall performance and recommendation.

Potok, Thomas E↗

Atom Interferometry for Dark Contents of the Vacuum Searches

A cold atom interferometer is being developed using 85Rb atoms towards a search for the dark contents of the vacuum, and as a test stand for inertial sensing applications. Here we outline the current status of the experiment and report the observation of Ramsey interference fringes in the apparatus.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Temporal Methods to Detect Content-Based Anomalies in Social Media

Here, we develop a method for time-dependent topic tracking and meme trending in social media. Our objective is to identify time periods whose content differs signifcantly from normal, and we utilize two techniques to do so. The first is an information-theoretic analysis of the distributions of terms emitted during different periods of time. In the second, we cluster documents from each time period and analyze the tightness of each clustering. We also discuss a method of combining the scores created by each technique, and we provide ample empirical analysis of our methodology on various Twitter datasets.

97 MATHEMATICS AND COMPUTING↗

Prussian blue analogue electrodes without zeolitic water content

A battery is provided with a hexacyanometallate cathode. The battery cathode is made from hexacyanometallate particles overlying a current collector. The hexacyanometallate particles have the chemical formula AXM1MM2N(CN)Z.d[H2O]ZEO.e[H2O]BND, where A is a metal from Groups 1A, 2A, or 3A of the Periodic Table, where M1 and M2 are each a metal with 2+ or 3+ valance positions, where “ZEO” and “BND” indicate zeolitic and bound water, respectively, where d is 0, and e is greater than 0 and less than 8. The anode material may primarily be a material such as hard carbon, soft carbon, oxides, sulfides, nitrides, silicon, metals, or combinations thereof. The electrolyte is non-aqueous. A method is also provided for fabricating hexacyanometallate with no zeolitic water content in response to dehydration annealing at a temperature of greater than 120 degrees C. and less than 200 degrees C.

Lu, Yuhao↗

Increasing the content of long chain fatty acids in seed oil

Provided are plants that express, or overexpress, a pPLAIIIδ protein. Constitutive or seed-specific expression of pPLAIIIδ protein in Arabidopsis increases seed oil content, the amount of C20 and C22 fatty acids, and the amount of C56, C58, and C60 triacylglycerols, effectively resulting in significantly higher oil yield per plant. Use of pPLAIIIδ is therefore an effective biotechnological tool to significantly increase plant yield, including oil, and the amount of high value long chain fatty acids in agricultural and horticultural crops, especially oilseed crops.

Wang, Xuemin↗

High content screening workflows for microscope imaging

Disclosed herein are systems methods for high content screening for microscope imaging. In some embodiments, the system comprises: a microscope; and a processor configured to implement: a slide loader module; a reference imager module; a slide imager module; a region of interest (ROI) finder module; a compare imager module; a calibrator module; and an image stitcher module.

42 ENGINEERING↗

Increased caloric and nutritional content of plant biomass

As described herein, plants expressing algal Diacylglycerol Acyltransferase Type Two (DGTT) from heterologous nucleic acids can alter acyl carbon partitioning in plant vegetative tissues and increase acyl-CoA-dependent triacylglycerol synthesis, thereby increasing the lipid content of the plants' tissues.

09 BIOMASS FUELS↗

Grasses with enhanced starch content

Methods and compositions for the production of monocot plants with increased starch content in stems are provided. In accordance with the invention, novel promoters and regulatory elements with specific temporal and spatial expression patterns are disclosed together with methods for the production of plants having desirable stem composition at harvest.

59 BASIC BIOLOGICAL SCIENCES↗

Compositions and methods for engineering oil content in plants

Compositions and methods for producing plants with enhanced oil content and higher seed yield are disclosed. The transgenic plant comprises a polynucleotide encoding a monoacylglycerol O-acyltransferase 1 (MGAT1) operatively linked to a plant-expressible promoter; a polynucleotide encoding a phosphatidylcholine diacylglycerol cholinephosphotransferase 1 (PDCT1) operatively linked to a plant-expressible promoter; a polynucleotide encoding a suppressor of expression of Sugar Dependent 1 (SPD1) operatively linked to a plant-expressible promoter; a polynucleotide encoding a diacylglyerol acyltransferase (DGAT1) operatively linked to a plant-expressible promoter and a polynucleotide encoding a glycerol-3-phosphate dehydrogenase (GPD1) operatively linked to a plant-expressible promoter; or a combination thereof.

Dhankher, Om Parkash↗