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NASA NTRS1996

Grant Proposal for the Continuation of the Voyager Interstellar Mission: LECP Investigation

This proposal documents the plans of the Low Energy Charged Particle (LECP) investigation team for participation in NASA's Voyager Interstellar Mission (VIM) as the Voyager 1 and 2 spacecraft explore the outer reaches of the heliosphere and search for the termination shock and the heliopause. The proposal covers the four year period from 1 January 1997 to 31 December 2000. The LECP instruments on Voyager 1 and 2 measure in situ intensities of charged particles with energies from about 30 keV to 100 MeV for ions, and about 20 keV to greater than 10 MeV for electrons. The instruments provide detailed spectral, angular, and compositional information about the particles. Composition is available for greater than 200 keV/nuc using multi-parameter measurements. Angular information is obtained by a mechanically scanned platform that rotates at various commanded rates. Measurements of low energy ion and electron intensities versus time and spatial location within the heliosphere contain an abundance of information regarding various transport and acceleration processes on both local (approx. 1 hr, approx. 0.01 AU) and global (approx. 11 yrs, approx. 100 AU) scales. The LECP instruments provide unique observations of such dynamical processes, and we anticipate that it will return critical information regarding the boundaries of the heliosphere. Several recent and exciting discoveries based on LECP measurements emphasize the important role that low energy charged particle distributions play in physical processes in the interplanetary medium. Yet, at the same time, these discoveries also underscore the fact that our understanding of processes in the outer heliosphere is, in most cases, incomplete, and in others, only rudimentary at best. Among the discoveries referred to above are the following: (1) Shocks: Examination of greater than 30 keV ion intensities have revealed: (a) a total absence of acceleration beyond only -100-200 keV at a strong transient shock in May 1991 at 35 AU, despite an enhanced level of seed particles; (b) a large transient shock in September 1991 of global scale, with intensities of shock-accelerated ions greater than or equal to 30 keV to approx. 30 MeV showing complex, highly energy-dependent spatial evolution, and small-scale (approx. few gyroradii), often anisotropic, micro-structures; (c) recurrent intensity increases in greater than or equal to 30 keV to -few MeV ions, with structures that, in some cases, show no correlation with the associated corotating shock. (2) Superthermal ion pressure: A global merged interaction region with a leading shock, downstream of which the superthermal ion (greater than or equal to 30 keV to approx. 4 MeV) pressure is comparable to that of the thermal plasma, and the total particle pressure yields a plasma beta of order unity. (3) Pickup ions: Measurements of the C/O ratio within transient structures at 35-45 AU showing the first clear evidence that transient shocks can pre-accelerate interstellar pickup ions from approx. 1 keV/nuc to at least 1 MeV/nuc. (4) Seed particles: Injection of ions for acceleration to high energies at the termination shock is unlikely to be a problem, since interplanetary transient and recurrent shocks are continually accelerating ions, of solar wind or interstellar origin, to highly superthermal energies. (5) Precursor electrons: Ambient solar electrons (greater than or equal to few tens of keV) that exist in the outer heliosphere ca form a broad precursor, several days wide, that is upstream of the termination shock and potentially observable a few months prior to the shock crossing. (6) Solar wind velocity at Voyager 1: We can use LECP ion data to obtain the solar wind velocity at Voyager 1, enabling us to provide critical measurement of the plasma flow as we approach and encounter the termination shock and other regions (necessary due to the partial failure of the Voyager 1 PLS experiment). The work of the LECP investigator team during the VIM will include: (1) Continuing operations with regard to the receipt, processing, verification, cataloging, display, and distribution of the data from the LECP instruments on Voyager 1 and 2, (2) Monitoring the health and performance of the LECP instruments, and evaluating and characterizing the response of the LECP instruments to various energetic particle and plasma environments, (3) Participating in, and supporting Voyager Project planning exercises and other coordinated activities relevant to exploration of the outer heliosphere, (4) Developing analysis techniques and operational procedures suitable for searching for and characterizing the boundaries and unique regions of the outher heliosphere, (5) Continuing the preparation of data sets appropriate for submission to the National Space Sciences Data Center (NSSDC) and, where appropriate, the Planetary Data System (PDS), (6) Maintaining direct Web access to online LECP data through the JHU/APL Voyager LECP home page, (7) Performing scientific evaluations of the Voyager 1 and 2 LECP data sets in conjunction with other data sets and other investigators, with particular focus on the outer regions of the heliosphere, and (8) Publishing the results of these evaluations in the scientific literature and presenting the results in scientific conferences.

Krimigis, Stamatios M.↗

NASA NTRS2008

Hail Size Distribution Mapping

A 3-D weather radar visualization software program was developed and implemented as part of an experimental Launch Pad 39 Hail Monitor System. 3DRadPlot, a radar plotting program, is one of several software modules that form building blocks of the hail data processing and analysis system (the complete software processing system under development). The spatial and temporal mapping algorithms were originally developed through research at the University of Central Florida, funded by NASA s Tropical Rainfall Measurement Mission (TRMM), where the goal was to merge National Weather Service (NWS) Next-Generation Weather Radar (NEXRAD) volume reflectivity data with drop size distribution data acquired from a cluster of raindrop disdrometers. In this current work, we adapted these algorithms to process data from a cluster of hail disdrometers positioned around Launch Pads 39A or 39B, along with the corresponding NWS radar data. Radar data from all NWS NEXRAD sites is archived at the National Climatic Data Center (NCDC). That data can be readily accessed at . 3DRadPlot plots Level III reflectivity data at four scan elevations (this software is available at Open Channel Software, ). By using spatial and temporal interpolation/extrapolation based on hydrometeor fall dynamics, we can merge the hail disdrometer array data coupled with local Weather Surveillance Radar-1988, Doppler (WSR-88D) radial velocity and reflectivity data into a 4-D (3-D space and time) picture of hail size distributions. Hail flux maps can then be generated and used for damage prediction and assessment over specific surfaces corresponding to structures within the disdrometer array volume. Immediately following a hail storm, specific damage areas and degree of damage can be identified for inspection crews.

Source record↗

NASA NTRSDate not supplied

Lunar Resources Catalog (LRC): Viper Pathfinder Dataset

Introduction: A new era in lunar exploration has recently begun. Through NASA’s robotic Commercial Lunar Payload Services (CLPS) initiative, international and the human Artemis programs, multiple assets are being deployed to explore the Moon and at a rapid cadence. There will be a huge expanse in lunar surface exploration with mobility (e.g., rovers). Several missions are focused on collecting data for assessing lunar resources for potential In-Situ Resource Utilization (ISRU). With this expansion in exploration there will be a commensurate expansion in the volume and variety of data. Work has begun on establishing a measurement plan (i.e., what data is needed) for ISRU [1] but how to integrate these data into the broader Planetary Data Ecosystem (PDE) following FAIR (i.e., Findability, Accessibility, Interoperability, and Reuse) data practices has not been addressed. The VIPER team intends to engage this challenge.

VIPER↗

DOE OSTI2021

Streaming Generalized Canonical Polyadic Tensor Decompositions

In this paper, we develop a method which we call OnlineGCP for computing the Generalized Canonical Polyadic (GCP) tensor decomposition of streaming data. GCP differs from traditional canonical polyadic (CP) tensor decompositions as it allows for arbitrary objective functions which the CP model attempts to minimize. This approach can provide better fits and more interpretable models when the observed tensor data is strongly non-Gaussian. In the streaming case, tensor data is gradually observed over time and the algorithm must incrementally update a GCP factorization with limited access to prior data. In this work, we extend the GCP formalism to the streaming context by deriving a GCP optimization problem to be solved as new tensor data is observed, formulate a tunable history term to balance reconstruction of recently observed data with data observed in the past, develop a scalable solution strategy based on segregated solves using stochastic gradient descent methods, describe a software implementation that provides performance and portability to contemporary CPU and GPU architectures and integrates with Matlab for enhanced usability, and demonstrate the utility and performance of the approach and software on several synthetic and real tensor data sets.

97 MATHEMATICS AND COMPUTING↗

NASA NTRS1988

A design for a ground-based data management system

An initial design for a ground-based data management system which includes intelligent data abstraction and cataloging is described. The large quantity of data on some current and future NASA missions leads to significant problems in providing scientists with quick access to relevant data. Human screening of data for potential relevance to a particular study is time-consuming and costly. Intelligent databases can provide automatic screening when given relevent scientific parameters and constraints. The data management system would provide, at a minimum, information of availability of the range of data, the type available, specific time periods covered together with data quality information, and related sources of data. The system would inform the user about the primary types of screening, analysis, and methods of presentation available to the user. The system would then aid the user with performing the desired tasks, in such a way that the user need only specify the scientific parameters and objectives, and not worry about specific details for running a particular program. The design contains modules for data abstraction, catalog plan abstraction, a user-friendly interface, and expert systems for data handling, data evaluation, and application analysis. The emphasis is on developing general facilities for data representation, description, analysis, and presentation that will be easily used by scientists directly, thus bypassing the knowledge acquisition bottleneck. Expert system technology is used for many different aspects of the data management system, including the direct user interface, the interface to the data analysis routines, and the analysis of instrument status.

Lambird, Barbara A.↗

NASA NTRS2004

Web-Based Satellite Products Database for Meteorological and Climate Applications

The need for ready access to satellite data and associated physical parameters such as cloud properties has been steadily growing. Air traffic management, weather forecasters, energy producers, and weather and climate researchers among others can utilize more satellite information than in the past. Thus, it is essential that such data are made available in near real-time and as archival products in an easy-access and user friendly environment. A host of Internet web sites currently provide a variety of satellite products for various applications. Each site has a unique contribution with appeal to a particular segment of the public and scientific community. This is no less true for the NASA Langley's Clouds and Radiation (NLCR) website (http://www-pm.larc.nasa.gov) that has been evolving over the past 10 years to support a variety of research projects This website was originally developed to display cloud products derived from the Geostationary Operational Environmental Satellite (GOES) over the Southern Great Plains for the Atmospheric Radiation Measurement (ARM) Program. It has evolved into a site providing a comprehensive database of near real-time and historical satellite products used for meteorological, aviation, and climate studies. To encourage the user community to take advantage of the site, this paper summarizes the various products and projects supported by the website and discusses future options for new datasets.

Phan, Dung↗

NASA NTRS2005

An Interoperable, Agricultural Information System Based on Satellite Remote Sensing Data

Monitoring global agricultural crop conditions during the growing season and estimating potential seasonal production are critically important for market development of US. agricultural products and for global food security. The Goddard Space Flight Center Earth Sciences Data and Information Services Center Distributed Active Archive Center (GES DISC DAAC) is developing an Agricultural Information System (AIS), evolved from an existing TRMM Online Visualization and Analysis System (TOVAS), which will operationally provide satellite remote sensing data products (e.g., rainfall) and services. The data products will include crop condition and yield prediction maps, generated from a crop growth model with satellite data inputs, in collaboration with the USDA Agricultural Research Service. The AIS will enable the remote, interoperable access to distributed data, by using the GrADS-DODS Server (GDS) and by being compliant with Open GIS Consortium standards. Users will be able to download individual files, perform interactive online analysis, as well as receive operational data flows. AIS outputs will be integrated into existing operational decision support systems for global crop monitoring, such as those of the USDA Foreign Agricultural Service and the U.N. World Food Program.

Teng, William↗

NASA NTRS2011

Applying Geospatial Technologies for International Development and Public Health: The USAID/NASA SERVIR Program

Background: SERVIR -- the Regional Visualization and Monitoring System -- helps people use Earth observations and predictive models based on data from orbiting satellites to make timely decisions that benefit society. SERVIR operates through a network of regional hubs in Mesoamerica, East Africa, and the Hindu Kush-Himalayas. USAID and NASA support SERVIR, with the long-term goal of transferring SERVIR capabilities to the host countries. Objective/Purpose: The purpose of this presentation is to describe how the SERVIR system helps the SERVIR regions cope with eight areas of societal benefit identified by the Group on Earth Observations (GEO): health, disasters, ecosystems, biodiversity, weather, water, climate, and agriculture. This presentation will describe environmental health applications of data in the SERVIR system, as well as ongoing and future efforts to incorporate additional health applications into the SERVIR system. Methods: This presentation will discuss how the SERVIR Program makes environmental data available for use in environmental health applications. SERVIR accomplishes its mission by providing member nations with access to geospatial data and predictive models, information visualization, training and capacity building, and partnership development. SERVIR conducts needs assessments in partner regions, develops custom applications of Earth observation data, and makes NASA and partner data available through an online geospatial data portal at SERVIRglobal.net. Results: Decision makers use SERVIR to improve their ability to monitor air quality, extreme weather, biodiversity, and changes in land cover. In past several years, the system has been used over 50 times to respond to environmental threats such as wildfires, floods, landslides, and harmful algal blooms. Given that the SERVIR regions are experiencing increased stress under larger climate variability than historic observations, SERVIR provides information to support the development of adaptation strategies for nations affected by climate change. Conclusions: SERVIR is a platform for collaboration and cross-agency coordination, international partnerships, and delivery of web-based geospatial information services and applications. SERVIR makes a variety of geospatial data available for use in studies of environmental health outcomes.

Hemmings, Sarah↗

NASA NTRS2013

Web Based Prognostics and 24/7 Monitoring

We created a general framework for analysts to store and view data in a way that removes the boundaries created by operating systems, programming languages, and proximity. With the advent of HTML5 and CSS3 with JavaScript the distribution of information is limited to only those who lack a browser. We created a framework based on the methodology: one server, one web based application. Additional benefits are increased opportunities for collaboration. Today the idea of a group in a single room is antiquated. Groups will communicate and collaborate with others from other universities, organizations, as well as other continents across times zones. There are many varieties of data gathering and condition-monitoring software available as well as companies who specialize in customizing software to individual applications. One single group will depend on multiple languages, environments, and computers to oversee recording and collaborating with one another in a single lab. The heterogeneous nature of the system creates challenges for seamless exchange of data and ideas between members. To address these limitations we designed a framework to allow users seamless accessibility to their data. Our framework was deployed using the data feed on the NASA Ames' planetary rover testbed. Our paper demonstrates the process and implementation we followed on the rover.

CSS3↗

NASA NTRSDate not supplied

The Satellite Flythrough and Reconstruction Softwares at CCMC

The next-generation of model data visualization to be offered at the Community Coordinated Modeling Center (CCMC) will be based on Kamodo, an open source python package. To increase the usefulness of our services, we are also developing new capabilities based on this software, called the satellite flythrough and the reconstruction tools, to be offered both as packages for offline analysis and through an online interface (coming soon). The satellite flythrough software ‘flies’ a satellite trajectory, whether real or imaginary, through either model data hosted at CCMC or on a personal machine. This service greatly simplifies the complexity of users’ access to model data, abstracting away the time-consuming details of model data formats and interpolation. We demonstrate execution times of a few seconds to a few minutes for several example flythroughs of a trajectory stretching over a few days, depending on the parameters chosen. We also demonstrate a reconstruction tool built on top of the satellite flythrough software, for use with mission planning and model-data comparisons. This tool, based on reconstructions provided for the GDC Science and Technology Definition Team, converts multiple, simultaneous satellite flythroughs into two-dimensional reconstructions. The reconstruction tool provides a software capability for satellite constellations to determine how many satellites are needed and in what configuration to resolve the desired features in the model data. Both tools are currently available through GitHub for a selection of CCMC-hosted ITM models. Finally, we present initial results from work in progress and plans for future work, including an expansion of the reconstruction tool to provide 3D reconstruction capabilities and a line-of-sight calculation tool.

software, python↗

NASA NTRSDate not supplied

An Oveview of TROPESS Data Products and Services at the NASA GES DISC

The TRopospheric Ozone and Precursors from Earth System Sounding (TROPESS) project generates Earth System Data Records (ESDRs) of ozone, and other atmospheric constituents (CH4,CO, H2O, HDO, NH3, PAN and temperature) by processing data from multiple satellites through a common retrieval algorithm and ground data system. Satellite Level-1B input data used in generating the TROPESS L2 data products include CrIS NOAA-20 (JPSS-1), CrIS SNPP, AIRS Aqua, OMI Aura, and TROPOMI S5P. The common retrieval framework is known as the MUlti-SpEctra, MUlti-SpEcies, Multi-SEnsors (MUSES) science data processing system (MUSES-SDPS). Several of the TROPESS data products are now available from the NASA Goddard Earth Sciences Data and Information Service Center (GES DISC) for users to download. In this presentation we provide an overview of the various TROPESS data products. These data products can be divided into the following Forward Stream types: Standard Products, Summary Products, and Full-Archival Products. Standard Products are for users that are doing full analysis with avenging kernel and covariance corresponding to retrieved vertical profiles. Summary products have a smaller file size and are more convenient for first-look and rapid analysis, include total and partial columns, as well as column averaging kernels. The Full-Archival Products will contain all information used in creating the data. TROPESS also creates Special Products, provided on an as-needed and as-available basis to support NASA field missions and individual-investigator requests over specific regions. Eventually, TROPESS will also produce and deliver a set of Reanalysis Stream products. Data at the GES DISC are being transitioned into the "Cloud". This will allow users with "Cloud” access to perform data analysis directly on the data without downloading the data to their system. Services, such as subsetting and data visualization, will also be provided for TROPESS data products at the GES DISC.

James Johnson↗

NASA NTRSDate not supplied

Bringing Research to New Heights: How CASEI Integrates Data Curation, Discovery, and Education in Earth and Atmospheric Science

A challenging aspect of any project is finding all the relevant data and information needed to address the research objective. Searching for data and its contextual metadata can become overwhelming for both undergraduate and graduate students, potentially hindering their work and affecting the scientific discoveries that could be made in the long run. To ease this, the NASA Airborne Data Management Group (ADMG), part of the Interagency Implementation and Advanced Concepts Team (IMPACT), has developed the new Catalog of Archived Suborbital Earth science Investigations (CASEI). CASEI includes a web portal that users, be they professionals or students, can use to search, browse, discover, and locate relevant observations associated with NASA’s airborne and field campaigns. Users are able to query data in a variety of ways (via keywords, locations, timeframe, etc) from one online portal, minimizing the amount of time needed to search. CASEI also allows access to key contextual metadata and data from a wide array of Earth and Atmospheric Science topics such as aerosols and boundary layer processes, as well as ice and glacial properties or processes. Users are able to access the data via DOI links to data set landing pages. This presentation will demonstrate how CASEI can be used for classwork and student research. Teachers can provide CASEI to their students as a tool for their studies, or use it to find data themselves while constructing their curriculums. Additionally, users can leverage CASEI to learn about NASA’s Earth and Atmospheric Science research efforts and to find data relevant for assignments or other research projects. The metadata in CASEI has been carefully curated, and highlights important information about the campaigns and their data. Students can explore and learn about the scientific objectives of the campaigns, as well as descriptions of the campaign’s best research days. Having access to contextual metadata in an easy to understand way can help plant the seeds of new ideas in students at any point in their academic journey. From class projects to theses/dissertations and other research, CASEI is a valuable emerging tool for data discovery, giving access to all users and guiding researchers to NASA’s unique airborne data to answer the burning Earth Science questions of our time.

education↗

DOE OSTI2023

Chemical Blast Standard (1 kg)

Chemical explosions create blast waves with large overpressure disturbances. It is important to develop a standard blast model based on data to accurately predict acoustic blast-wave amplitudes near detonations and invert for explosion energy from distant observations of blast-wave signals. However, open data from large, controlled chemical explosions with reliable ground truth can be challenging to find. The lack of access to such data could limit the number of contributions to related research and potentially stifle the rate of discoveries or validation of existing models. Here, to address these data scarcity problem, we have curated and compiled a standardized set of 817 blast-wave waveforms from 19 distinct high-explosive events. The blast-wave waveforms are standardized to a 1 kg trinitrotoluene explosion using scaling laws and corrections for location effects. A brief overview of the dataset is presented along with explosion feature models as well as recommendations for extracting explosion features. The resulting dataset is distributed to an open repository in both Seismic Analysis Code and pandas DataFrame formats containing the waveforms, the scaled distances, and the sample rates.

58 GEOSCIENCES↗

DOE OSTI2025

Mapping and Synthesis of International Biomass Supply Assessments

This report, Mapping and Synthesis of International Biomass Supply Assessments (or Global Biomass Resource Assessment) is the first step in a long-term process to assemble data from around the globe into a virtual repository that can be updated and provide user-friendly access to the data. The Clean Energy Ministerial (CEM) Biofuture Platform Initiative recommended that research be completed to “address the need for internationally accepted benchmarks quantifying sustainable biomass feedstock supplies.” To act upon the CEM Biofuture recommendation, in 2024, the U.S. Department of Energy (DOE) commissioned Oak Ridge National Laboratory (ORNL) to prepare this report as the primary deliverable for a one-year assignment to assemble data into a citable form that could help resolve the persistent question presented related to bioenergy policy, “Is there enough sustainable biomass?” In response to that query, this report includes information received by August 2024 from national CEM representatives, collaborators, and public sources on current and future sustainable biomass supplies in 62 nations,and subsequently documents (a) the approach used by ORNL to analyze and categorize the information received in a manner that enables aggregation and comparability; and (b) recommendations for next steps and guidelines to help others update and harmonize future assessments of global sustainable biomass supplies.

09 BIOMASS FUELS↗

NASA NTRS1975

Trophic status of inland lakes from LANDSAT

A first-cut assessment of the trophic status of inland lakes in Wisconsin was obtained from LANDSAT data. To satisfy the criteria of the project, a large and versatile computer program was developed to gain access to LANDSAT data. This analysis technique has proven to be a cost-effective method of classifying inland lakes in Wisconsin.

Fisher, L. T.↗

NASA NTRS2006

Sensor Management for Applied Research Technologies (SMART)-On Demand Modeling (ODM) Project

NASA requires timely on-demand data and analysis capabilities to enable practical benefits of Earth science observations. However, a significant challenge exists in accessing and integrating data from multiple sensors or platforms to address Earth science problems because of the large data volumes, varying sensor scan characteristics, unique orbital coverage, and the steep learning curve associated with each sensor and data type. The development of sensor web capabilities to autonomously process these data streams (whether real-time or archived) provides an opportunity to overcome these obstacles and facilitate the integration and synthesis of Earth science data and weather model output. A three year project, entitled Sensor Management for Applied Research Technologies (SMART) - On Demand Modeling (ODM), will develop and demonstrate the readiness of Open Geospatial Consortium (OGC) Sensor Web Enablement (SWE) capabilities that integrate both Earth observations and forecast model output into new data acquisition and assimilation strategies. The advancement of SWE-enabled systems (i.e., use of SensorML, sensor planning services - SPS, sensor observation services - SOS, sensor alert services - SAS and common observation model protocols) will have practical and efficient uses in the Earth science community for enhanced data set generation, real-time data assimilation with operational applications, and for autonomous sensor tasking for unique data collection.

Goodman, M.↗

NASA NTRS2012

Explanatory Supplement to the WISE All-Sky Release Products

The Wide-field Infrared Survey Explorer (WISE; Wright et al. 2010) surveyed the entire sky at 3.4, 4.6, 12 and 22 microns in 2010, achieving 5-sigma point source sensitivities per band better than 0.08, 0.11, 1 and 6 mJy in unconfused regions on the ecliptic. The WISE All-Sky Data Release, conducted on March 14, 2012, incorporates all data taken during the full cryogenic mission phase, 7 January 2010 to 6 August 20l0,that were processed with improved calibrations and reduction algorithms. Release data products include: (1) an Atlas of 18,240 match-filtered, calibrated and coadded image sets; (2) a Source Catalog containing positions and four-band photometry for over 563 million objects, and (3) an Explanatory Supplement. Ancillary products include a Reject Table that contains 284 million detections that were not selected for the Source Catalog because they are low signal-to-noise ratio or spurious detections of image artifacts, an archive of over 1.5 million sets of calibrated WISE Single-exposure images, and a database of 9.4 billion source extractions from those single images, and moving object tracklets identified by the NEOWISE program (Mainzer et aI. 2011). The WISE All-Sky Data Release products supersede those from the WISE Preliminary Data Release (Cutri et al. 2011). The Explanatory Supplement to the WISE All-Sky Data Release Products is a general guide for users of the WISE data. The Supplement contains an overview of the WISE mission, facilities, and operations, a detailed description of WISE data processing algorithms, a guide to the content and formals of the image and tabular data products, and cautionary notes that describe known limitations of the All-Sky Release products. Instructions for accessing the WISE data products via the services of the NASA/IPAC Infrared Science Archive are provided. The Supplement also provides analyses of the achieved sky coverage, photometric and astrometric characteristics and completeness and reliability of the All-Sky Release data products. The WISE All-Sky Release Explanatory Supplement is an on-line document that is updated frequently to provide the most current information for users of the WISE data products. The Explanatory Supplement is maintained at: http://wise2.ipac.caltech.edu/docs/release/allsky/expsup/index.html WISE is a joint project of the University of California, Los Angeles and the Jet Propulsion Laboratory/California Institute of Technology, funded by the National Aeronautics and Space Administration. NEOWISE is a project of the Jet Propulsion Laboratory/California Institute of Technology, funded by the Planetary Science Division of the National Aeronautics and Space Administration.

Source record↗

NASA NTRS2018

GeneLab Analysis Working Group Kick-Off Meeting

Goals to achieve for GeneLab AWG - GL vision - Review of GeneLab AWG charter Timeline and milestones for 2018 Logistics - Monthly Meeting - Workshop - Internship - ASGSR Introduction of team leads and goals of each group Introduction of all members Q/A Three-tier Client Strategy to Democratize Data Physiological changes, pathway enrichment, differential expression, normalization, processing metadata, reproducibility, Data federation/integration with heterogeneous bioinformatics external databases The GLDS currently serves over 100 omics investigations to the biomedical community via open access. In order to expand the scope of metadata record searches via the GLDS, we designed a metadata warehouse that collects and updates metadata records from external systems housing similar data. To demonstrate the capabilities of federated search and retrieval of these data, we imported metadata records from three open-access data systems into the GLDS metadata warehouse: NCBI's Gene Expression Omnibus (GEO), EBI's PRoteomics IDEntifications (PRIDE) repository, and the Metagenomics Analysis server (MG-RAST). Each of these systems defines metadata for omics data sets differently. One solution to bridge such differences is to employ a common object model (COM) to which each systems' representation of metadata can be mapped. Warehoused metadata records are then transformed at ETL to this single, common representation. Queries generated via the GLDS are then executed against the warehouse, and matching records are shown in the COM representation (Fig. 1). While this approach is relatively straightforward to implement, the volume of the data in the omics domain presents challenges in dealing with latency and currency of records. Furthermore, the lack of a coordinated has been federated data search for and retrieval of these kinds of data across other open-access systems, so that users are able to conduct biological meta-investigations using data from a variety of sources. Such meta-investigations are key to corroborating findings from many kinds of assays and translating them into systems biology knowledge and, eventually, therapeutics.

GeneLab↗