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At least 1,513 records · Page 84

Design and analysis of a fast, two-mirror soft-x-ray microscope

During the past several years, a number of investigators have addressed the design, analysis, fabrication, and testing of spherical Schwarzschild microscopes for soft-x-ray applications using multilayer coatings. Some of these systems have demonstrated diffraction limited resolution for small numerical apertures. Rigorously aplanatic, two-aspherical mirror Head microscopes can provide near diffraction limited resolution for very large numerical apertures. The relationships between the numerical aperture, mirror radii and diameters, magnifications, and total system length for Schwarzschild microscope configurations are summarized. Also, an analysis of the characteristics of the Head-Schwarzschild surfaces will be reported. The numerical surface data predicted by the Head equations were fit by a variety of functions and analyzed by conventional optical design codes. Efforts have been made to determine whether current optical substrate and multilayer coating technologies will permit construction of a very fast Head microscope which can provide resolution approaching that of the wavelength of the incident radiation.

Shealy, D. L.↗

Information, entropy and fidelity in visual communication

This paper presents an assessment of visual communication that integrates the critical limiting factors of image gathering and display with the digital processing that is used to code and restore images. The approach focuses on two mathematical criteria, information and fidelity, and on their relationships to the entropy of the encoded data and to the visual quality of the restored image.

Huck, Friedrich O.↗

Application of a distributed network in computational fluid dynamic simulations

A general-purpose 3-D, incompressible Navier-Stokes algorithm is implemented on a network of concurrently operating workstations using parallel virtual machine (PVM) and compared with its performance on a CRAY Y-MP and on an Intel iPSC/860. The problem is relatively computationally intensive, and has a communication structure based primarily on nearest-neighbor communication, making it ideally suited to message passing. Such problems are frequently encountered in computational fluid dynamics (CDF), and their solution is increasingly in demand. The communication structure is explicitly coded in the implementation to fully exploit the regularity in message passing in order to produce a near-optimal solution. Results are presented for various grid sizes using up to eight processors.

Deshpande, Manish↗

Status Of The UPS Space-Marching Flow Solver

The status of the three-dimensional parabolized Navier-Stokes solver UPS is described. The UPS code, initiated at NASA Ames Research Center in 1986, continues to develop and evolve through application to supersonic and hypersonic flow fields. Hypersonic applications have motivated enhancement of the physical modeling capabilities of the code, specifically real gas modeling, boundary conditions, and turbulence and transition modeling. The UPS code has also been modified to enhance robustness and efficiency in order to be practically used in concert with an optimization code for supersonic transport design. These developments are briefly described along with some relevant results for generic test problems obtained during verification of the enhancements. Included developments and results have previously been published and widely disseminated domestically.

Lawerence, Scott L.↗

Analysis of ISO Data

A block grant supported several astronomers who executed observing programs using the Infrared Space Observatory (ISO). The ISO project in which Harriet Dinerstein participated was a study of sulfur and neon abundances in extragalactic H II regions using the ISO Short Wavelength Spectrometer (SWS). Evans and Jaffe, along with collaborators Ewine van Dishoeck and Wing-Fai Thi, and then graduate student Wenbin Li, carried out an in-depth study of the peripheral region of the molecular cloud L1204/S140, where the far ultraviolet radiation and the density are relatively low. Their observations test theories of photon-dominated regions (PDRs) in a regime that has been little explored. One ISO program was involved with PHT-32 observations of about a dozen young stars to search for extended emission that could be modeled with our dust-modeling-code at UT. The document reports on preliminary analysis of PHT 32 scanning of 10 pre-main-sequence stars at 50 and 100 microns. A small sample of R Coronae Borealis stars was observed with the SWS.

David L. Lambert↗

A Simple Tool for the Design and Analysis of Multiple-reflector Antennas in a Multi-disciplinary Environment

The process of designing and analyzing a multiple-reflector system has traditionally been time-intensive, requiring large amounts of both computational and human time. At many frequencies, a discrete approximation of the radiation integral may be used to model the system. The code which implements this physical optics (PO) algorithm was developed at the Jet Propulsion Laboratory. It analyzes systems of antennas in pairs, and for each pair, the analysis can be computationally time-consuming. Additionally, the antennas must be described using a local coordinate system for each antenna, which makes it difficult to integrate the design into a multi-disciplinary framework in which there is traditionally one global coordinate system, even before considering deforming the antenna as prescribed by external structural and/or thermal factors. Finally, setting up the code to correctly analyze all the antenna pairs in the system can take a fair amount of time, and introduces possible human error.

Katz, Daniel, S.↗

Efficiency of a Grazing-incidence Off-plane Grating in the Soft-x-ray Region

Efficiency measurements of a grazing-incidence diffraction grating in the off-plane mount were performed using polarized synchrotron radiation. The grating had 5000 grooves/mm, an effective blaze angle of 14 deg., and was gold coated. The efficiencies in the two polarization orientations (TM and TE) were measured in the 1.5-5.O nm wavelength range and were compared with the efficiencies calculated using the PCGrate-SX code. The TM and TE efficiencies differ, offering the possibility of performing unique science studies of astrophysical, solar, and laboratory sources by exploiting the polarization sensitivity of the off-plane grating.

Seely, J. F.↗

Spatially and Temporally Resolved Measurements of Velocity in a H2-air Combustion-Heated Supersonic Jet

This paper presents simultaneous measurements at multiple points of two orthogonal components of flow velocity using a single-shot interferometric Rayleigh scattering (IRS) technique. The measurements are performed on a large-scale Mach 1.6 (Mach 5.5 enthalpy) H2-air combustion jet during the 2007 test campaign in the Direct Connect Supersonic Combustion Test facility at NASA Langley Research Center. The measurements are performed simultaneously with CARS (Coherent Anti-stokes Raman Spectroscopy) using a combined CARS-IRS instrument with a common path 9-nanosecond pulsed, injection-seeded, 532-nm Nd:YAG laser probe pulse. The paper summarizes the measurements of velocities along the core of the vitiated air flow as well as two radial profiles. The average velocity measurement near the centerline at the closest point from the nozzle exit compares favorably with the CFD calculations using the VULCAN code. Further downstream, the measured axial velocity shows overall higher values than predicted with a trend of convergence at further distances. Larger discrepancies are shown in the radial profiles.

Bivolaru, Daniel↗

Application of the FUN3D Unstructured-Grid Navier-Stokes Solver to the 4th AIAA Drag Prediction Workshop Cases

FUN3D Navier-Stokes solutions were computed for the 4th AIAA Drag Prediction Workshop grid convergence study, downwash study, and Reynolds number study on a set of node-based mixed-element grids. All of the baseline tetrahedral grids were generated with the VGRID (developmental) advancing-layer and advancing-front grid generation software package following the gridding guidelines developed for the workshop. With maximum grid sizes exceeding 100 million nodes, the grid convergence study was particularly challenging for the node-based unstructured grid generators and flow solvers. At the time of the workshop, the super-fine grid with 105 million nodes and 600 million elements was the largest grid known to have been generated using VGRID. FUN3D Version 11.0 has a completely new pre- and post-processing paradigm that has been incorporated directly into the solver and functions entirely in a parallel, distributed memory environment. This feature allowed for practical pre-processing and solution times on the largest unstructured-grid size requested for the workshop. For the constant-lift grid convergence case, the convergence of total drag is approximately second-order on the finest three grids. The variation in total drag between the finest two grids is only 2 counts. At the finest grid levels, only small variations in wing and tail pressure distributions are seen with grid refinement. Similarly, a small wing side-of-body separation also shows little variation at the finest grid levels. Overall, the FUN3D results compare well with the structured-grid code CFL3D. The FUN3D downwash study and Reynolds number study results compare well with the range of results shown in the workshop presentations.

Lee-Rausch, Elizabeth M.↗

Towards Test Driven Development for Computational Science with pFUnit

Developers working in Computational Science & Engineering (CSE)/High Performance Computing (HPC) must contend with constant change due to advances in computing technology and science. Test Driven Development (TDD) is a methodology that mitigates software development risks due to change at the cost of adding comprehensive and continuous testing to the development process. Testing frameworks tailored for CSE/HPC, like pFUnit, can lower the barriers to such testing, yet CSE software faces unique constraints foreign to the broader software engineering community. Effective testing of numerical software requires a comprehensive suite of oracles, i.e., use cases with known answers, as well as robust estimates for the unavoidable numerical errors associated with implementation with finite-precision arithmetic. At first glance these concerns often seem exceedingly challenging or even insurmountable for real-world scientific applications. However, we argue that this common perception is incorrect and driven by (1) a conflation between model validation and software verification and (2) the general tendency in the scientific community to develop relatively coarse-grained, large procedures that compound numerous algorithmic steps.We believe TDD can be applied routinely to numerical software if developers pursue fine-grained implementations that permit testing, neatly side-stepping concerns about needing nontrivial oracles as well as the accumulation of errors. We present an example of a successful, complex legacy CSE/HPC code whose development process shares some aspects with TDD, which we contrast with current and potential capabilities. A mix of our proposed methodology and framework support should enable everyday use of TDD by CSE-expert developers.

pFUnit↗

Boundary Condition Study for the Juncture Flow Experiment in the NASA Langley 14x22-Foot Subsonic Wind Tunnel

Because future wind tunnel tests associated with the NASA Juncture Flow project are being designed for the purpose of CFD validation, considerable effort is going into the characterization of the wind tunnel boundary conditions, particularly at inflow. This is important not only because wind tunnel flowfield nonuniformities can play a role in integrated testing uncertainties, but also because the better the boundary conditions are known, the better CFD can accurately represent the experiment. This paper describes recent investigative wind tunnel tests involving two methods to measure and characterize the oncoming flow in the NASA Langley 14- by 22-Foot Subsonic Tunnel. The features of each method, as well as some of their pros and cons, are highlighted. Boundary conditions and modeling tactics currently used by CFD for empty-tunnel simulations are also described, and some results using three different CFD codes are shown. Preliminary CFD parametric studies associated with the Juncture Flow model are summarized, to determine sensitivities of the flow near the wing-body juncture region of the model to a variety of modeling decisions.

Rumsey, C. L.↗

The Detection of Aromatic Amino Acids in CR Chondrites Suggests They are Prebiotically Plausible

Amino acids (AAs) are the building blocks of proteins and are essential for life on Earth. Sources of AAs on early Earth range from exogenous sources such as delivery from extraterrestrial materials(i.e., meteorites, interplanetary dust particles, comets, etc.) to endogenous sources including chemical reactions in hydrothermal vents or atmospheric mixtures. Analyses of AAs of extraterrestrial origin from meteorites and laboratory studies of simulated prebiotic environments revealed that a diverse set of abiotically produced AAs may have been present on early Earth. However only a fraction of these AAs is found within the proteins of living organisms. Of the22 genetically encoded (proteinogenic) AAs, 20 occur in the standard genetic code (SGC) and are used by nearly all living organisms to build proteins. The universality of this AA alphabet suggests the presence and incorporation of these specific AAs occurred early in the evolution of life.

A. S. Burton↗

Measurements of the L-shell X-ray emission of fluorine-like europium

Measurements of the L-shell X-ray emission of fluorine-like europium ions (Eu 54+ ) were made under controlled laboratory conditions on the EBIT-I electron beam ion trap at Livermore using an X-ray calorimeter, extending such measurements to the middle of the rare earth elements. Comparing the calorimeter spectra with atomic data from the flexible atomic code, we have identified and analyzed several prominent n = 3 → n = 2 transitions, including one two-electron, one-photon core changing transition and one electric quadrupole transition. We find that the measured energies are typically up to several eV higher than predicted.

74 ATOMIC AND MOLECULAR PHYSICS↗

Connecting the Light Curves of Type IIP Supernovae to the Properties of Their Progenitors

Abstract Observations of core-collapse supernovae (CCSNe) reveal a wealth of information about the dynamics of the supernova ejecta and its composition but very little direct information about the progenitor. Constraining properties of the progenitor and the explosion requires coupling the observations with a theoretical model of the explosion. Here we begin with the CCSN simulations of Couch et al., which use a nonparametric treatment of the neutrino transport while also accounting for turbulence and convection. In this work we use the SuperNova Explosion Code to evolve the CCSN hydrodynamics to later times and compute bolometric light curves. Focusing on Type IIP SNe (SNe IIP), we then (1) directly compare the theoretical STIR explosions to observations and (2) assess how properties of the progenitor’s core can be estimated from optical photometry in the plateau phase alone. First, the distribution of plateau luminosities ( L 50 ) and ejecta velocities achieved by our simulations is similar to the observed distributions. Second, we fit our models to the light curves and velocity evolution of some well-observed SNe. Third, we recover well-known correlations, as well as the difficulty of connecting any one SN property to zero-age main-sequence mass. Finally, we show that there is a usable, linear correlation between iron core mass and L 50 such that optical photometry alone of SNe IIP can give us insights into the cores of massive stars. Illustrating this by application to a few SNe, we find iron core masses of 1.3–1.5 M ⊙ with typical errors of 0.05 M ⊙ . Data are publicly available online on Zenodo: doi: 10.5281/zenodo.6631964 .

79 ASTRONOMY AND ASTROPHYSICS↗

X-ray spectral signatures of photoionized plasmas

Plasma emission codes have become a standard tool for the analysis of spectroscopic data from cosmic X-ray sources. However, the assumption of collisional equilibrium, typically invoked in these codes, renders them inapplicable to many important astrophysical situations, particularly those involving X-ray photoionized nebulae. This point is illustrated by comparing model spectra which have been calculated under conditions appropriate to both coronal plasmas and X-ray photoionized plasmas. It is shown that the (3s-2p)/(3d-2p) line ratios in the Fe L-shell spectrum can be used to effectively discriminate between these two cases. This diagnostic will be especially useful for data analysis associated with AXAF and XMM, which will carry spectroscopic instrumentation with sufficient sensitivity and resolution to identify X-ray photoionized nebulae in a wide range of astrophysical environments.

Liedahl, Duane A.↗

A zonal CFD method for three-dimensional wing simulations

The primary objective of this work is to demonstrate the feasibility of a 3D potential/viscous flow coupling procedure for reducing computational effort while maintaining solution accuracy. The closed-loop, overlapped, velocity-coupling concept has been developed in a new code, ZAP3D, that couples a potential flow panel code with a Navier-Stokes method. The current ZAP3D calculation for an aspect ratio 5 wing with an outer domain radius of about 1.2 chords represents a speed-up in CPU time over the ARC3D large domain calculation by about a factor of 2.5. This improvement is achieved for less than a 0.5 percent deviation in C(L), 10 counts change in C(D), and 0.0015 variation in C(My). Additional reductions in the required computational domain for ZAP3D are expected as the method is further developed and refined.

Summa, J. M.↗

exRNA-eCLIP intersection analysis reveals a map of extracellular RNA binding proteins and associated RNAs across major human biofluids and carriers

Although the role of RNA binding proteins (RBPs) in extracellular RNA (exRNA) biology is well established, their exRNA cargo and distribution across biofluids are largely unknown. To address this gap, we extend the exRNA Atlas resource by mapping exRNAs carried by extracellular RBPs (exRBPs). This map was developed through an integrative analysis of ENCODE enhanced crosslinking and immunoprecipitation (eCLIP) data (150 RBPs) and human exRNA profiles (6,930 samples). Computational analysis and experimental validation identified exRBPs in plasma, serum, saliva, urine, cerebrospinal fluid, and cell-culture-conditioned medium. exRBPs carry exRNA transcripts from small non-coding RNA biotypes, including microRNA (miRNA), piRNA, tRNA, small nuclear RNA (snRNA), small nucleolar RNA (snoRNA), Y RNA, and lncRNA, as well as protein-coding mRNA fragments. Computational deconvolution of exRBP RNA cargo reveals associations of exRBPs with extracellular vesicles, lipoproteins, and ribonucleoproteins across human biofluids. Overall, we mapped the distribution of exRBPs across human biofluids, presenting a resource for the community.

59 BASIC BIOLOGICAL SCIENCES↗