FRAM In-Depth [Slides]
FRAM is an isotopic analysis code nominally designed for plutonium and uranium. It can also analyze other materials such as spent fuel (off all ages), medical isotopes.
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FRAM is an isotopic analysis code nominally designed for plutonium and uranium. It can also analyze other materials such as spent fuel (off all ages), medical isotopes.
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Legacy seismic data is used to characterize the subsurface geologic structure with a focus on permafrost extension on the North Slope of Alaska.
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Abstract not provided.
Abstract not provided.
Genomic DNA was isolated from soil and rhizosphere samples using the Zymo Quick-DNA fecal/soil microbe miniprep kit (catalog no. D6010) according to the manufacturer’s instructions (Zymo Research; Irvine, CA) with the modification of eluting in 100 uL elution buffer. Sample concentrations were quantified using the Qubit dsDNA HS assay kit (Thermo Fisher). For rhizosphere samples only, DNA was subsequently purified using Zymo’s ZR-96 DNA Clean & Concentrator kit (catalog no. D4024) to account for low DNA concentrations of these samples. . In each replicate block, there were five drip irrigation treatments (T1 = 100% normal irrigation, T2 = 56.25%, T3 = 37.5%, T4 = 18.75% and T5=no irrigation. On July 20, the strength of the drought treatments was increased: T1 remained at 100%, whereas T2 changed from 75% to 56.25%, T2 changed from 50% to 37.5%, and T4 changed from 25% to 18.75%. Sequencing was performed as described previously (Naylor, Fansler, et al. 2020). Sequences were amplified on the MiSeq platform (Illumina, San Diego, CA) using 16S primers (515F and 806R) specific to the V4 region. Raw sequence data was processed with the pipeline Hundo for amplicon quality control and annotation. Downstream statistical analyses on 16S datasets were performed using the program R and the packages ‘phyloseq’ and ‘vegan’.
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Closely related strains of thermophilic Synechococcus were cultivated from the microbial mats found in the effluent channels of Mushroom Spring, Yellowstone National Park (YNP). These strains have identical or nearly identical 16S rRNA sequences but are representative of separate, predicted putative ecotype (PE) populations, which were identified by using the more highly resolving psaA locus and which predominate at different vertical positions within the 1-mm-thick upper-green layer of the mat. Pyrosequencing confirmed that each strain contained a single, predominant psaA genotype. Strains differed in growth rate as a function of irradiance. A strain with a psaA genotype corresponding to a predicted PE that predominates near the mat surface grew fastest at high irradiances, whereas strains with psaA genotypes representative of predominant subsurface populations grew faster at low irradiance and exhibited greater sensitivity to abrupt shifts to high light. The high-light-adapted and low-light-adapted strains also exhibited differences in pigment content and the composition of the photosynthetic apparatus (photosystem ratio) when grown under different light intensities. Cells representative of the different strains had similar morphologies under low-light conditions, but under high-light conditions, cells of lowlight-adapted strains became elongated and formed short chains of cells. Collectively, the results presented here are consistent with the hypothesis that closely related, but distinct, ecological species of Synechococcus occupy different light niches in the Mushroom Spring microbial mat and acclimate differently to changing light environments.
Agrivoltaics integrates agricultural production with solar energy generation to address challenges related to land use, food security, and renewable energy development. This study provides the most comprehensive evaluation to date of global agrivoltaic research, aiming to classify the literature, identify strengths and gaps, and guide future work. We systematically screened over 3000 English-language publications through 2023 for relevant agrivoltaic publications. A total of 670 studies were categorized in the InSPIRE Data Portal across five agrivoltaic activities and multiple hierarchical themes, including physical, biological, technological, social, and crosscutting domains. We found that research was concentrated on crop production, microclimate dynamics, and PV performance, with gaps in areas like human health, wildlife, policy, and standardized methodologies. Although the U.S. emphasizes animal grazing and habitat-based systems in practice, most U.S.-based studies focused disproportionately on crop production. The analysis revealed uneven geographic and topical representation and highlighted a lack of integrated, interdisciplinary approaches. This study concludes that while agrivoltaic research has grown rapidly, more coordinated efforts could support standardized data collection, address overlooked ecological and social impacts, and align research focus with real-world system implementation, ultimately improving the scalability and successful deployment of agrivoltaic systems.
Genome-scale metabolic models (GEMs) enable the mathematical simulation of the metabolism of archaea, bacteria, and eukaryotic organisms. GEMs quantitatively define a relationship between genotype and phenotype by contextualizing different types of Big Data (e.g., genomics, metabolomics, and transcriptomics). In this review, we analyze the available Big Data useful for metabolic modeling and compile the available GEM reconstruction tools that integrate Big Data. We also discuss recent applications in industry and research that include predicting phenotypes, elucidating metabolic pathways, producing industry-relevant chemicals, identifying drug targets, and generating knowledge to better understand host-associated diseases. In addition to the up-to-date review of GEMs currently available, we assessed a plethora of tools for developing new GEMs that include macromolecular expression and dynamic resolution. Finally, we provide a perspective in emerging areas, such as annotation, data managing, and machine learning, in which GEMs will play a key role in the further utilization of Big Data.
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We present the first results of the Gould’s Belt Distances Survey (GOBELINS), a project aimed at measuring the proper motion and trigonometric parallax of a large sample of young stars in nearby regions using multi-epoch Very Long Baseline Array (VLBA) radio observations. Enough VLBA detections have now been obtained for 16 stellar systems in Ophiuchus to derive their parallax and proper motion. This leads to distance determinations for individual stars with an accuracy of 0.3 to a few percent. In addition, the orbits of six multiple systems were modelled by combining absolute positions with VLBA (and, in some cases, near-infrared) angular separations. Twelve stellar systems are located in the dark cloud Lynds 1688; the individual distances for this sample are highly consistent with one another and yield a mean parallax for Lynds 1688 of ϖ=7.28±0.06 mas, corresponding to a distance d=137.3±1.2 pc. This represents an accuracy greater than 1%. Three systems for which astrometric elements could be measured are located in the eastern streamer (Lynds 1689) and yield an estimate of ϖ=6.79±0.16 mas, corresponding to a distance d=147.3±3.4 pc. This suggests that the eastern streamer is located about 10 pc farther than the core, but this conclusion needs to be confirmed by observations of additional sources in the eastern streamer (currently being collected). From the measured proper motions, we estimate the one-dimensional velocity dispersion in Lynds 1688 to be 2.8 ± 1.8 and 3.0 ± 2.0 km s{sup −1}, in R.A. and decl., respectively; these are larger than, but still consistent within 1σ of, those found in other studies.
Here, we report on the analysis of 34 years of photometric observations of the pulsating helium atmosphere white dwarf GD358. The complete data set includes archival data from 1982 to 2006, and 1195.2 hr of new observations from 2007 to 2016. From this data set, we extract 15 frequencies representing g-mode pulsation modes, adding 4 modes to the 11 modes known previously. We present evidence that these 15 modes are ℓ = 1 modes, 13 of which belong to a consecutive sequence in radial overtone k. We perform a detailed asteroseismic analysis using models that include parameterized, complex, carbon and oxygen core composition profiles to fit the periods. Recent spectroscopic analyses place GD358 near the red edge of the DBV instability strip, at 24,000 ± 500 K and a $\mathrm{log}\,{\text{}}g$ of 7.8 ± 0.08 dex. The surface gravity translates to a mass range of 0.455–0.540 ${M}_{\odot }$. Our best-fit model has a temperature of 23,650 K and a mass of 0.5706 ${M}_{\odot }$. That is slightly more massive than what is suggested by the most recent spectroscopy. We find a pure helium layer mass of 10–5.50, consistent with the result of previous studies and the outward diffusion of helium over time.
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