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All sourcesNASA NTRSDOE OSTI
DOE OSTI2012

HIGH-CONTRAST IMAGING VIA MODAL CONVERGENCE OF DEFORMABLE MIRROR

For extremely high contrast imaging, such as direct observation of faint stellar companions, an adaptive optics system is required to produce low-halo and low-speckle regions in the focal plane. A method for deformable mirror control is proposed to achieve this goal. The method relies on a modal convergence of the deformable mirror driven by a focal-plane metric. The modal sets are derived from the Walsh functions. The Walsh-function modes serve two purposes: the expansion of the actuator displacements and the expansion of the phase functions. Taking advantage of the unique properties of the modal functions, a universal control algorithm is devised for the realization of high-contrast focal planes with and without the help of conventional coronagraphy. Numerical modeling is conducted to simulate complete imaging systems under various scenarios. It is shown that the proposed method reliably produces high-contrast focal planes using either a segmented or a membrane mirror. In the presence of random aberration the method is shown to be able to maintain high-contrast focal planes. Requiring neither retrieval of electric fields nor detailed knowledge of the deformable mirrors, this technique may allow high-contrast imaging in real time.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
NASA NTRS1993

A high-speed lossless data compression system for space applications

This paper reports on the integration of a lossless data compression/decompression chipset into a space data system architecture. For its compression engine, the data system incorporates the Universal Source Encoder (USE) designed for the NASA/Goddard Space Flight Center. Currently, the data compression testbed generates video frames consisting of 512 lines of 512 pixels having 8-bit resolution. Each image is passed through the USE where the lines are internally partitioned into 16-word blocks. These blocks are adaptively encoded across widely varying entropy levels using a Rice 12-option set coding algorithm. The current system operates at an Input/Output rate of 10 Msamples/s or 80 Mbits/s for each buffered input line. Frame and line synchronization for each image are maintained through the use of uniquely decodable command words. Length information of each variable length compressed image line is also included in the output stream. The data and command information are passed to the next stage of the system architecture through a serial fiber-optic transmitter. The initial segment of this stage consists of packetizer hardware which adds an appropriate CCSDS header to the received source data. An uncompressed mode is optionally available to pass image lines directly to the packetizer hardware. A data decompression testbed has also been developed to confirm the data compression operation.

Miko, Joe↗
DOE OSTI2015

MO-F-CAMPUS-J-05: Toward MRI-Only Radiotherapy: Novel Tissue Segmentation and Pseudo-CT Generation Techniques Based On T1 MRI Sequences

Purpose: To develop and validate a 4 class tissue segmentation approach (air cavities, background, bone and soft-tissue) on T1 -weighted brain MRI and to create a pseudo-CT for MRI-only radiation therapy verification. Methods: Contrast-enhanced T1-weighted fast-spin-echo sequences (TR = 756ms, TE= 7.152ms), acquired on a 1.5T GE MRI-Simulator, are used.MRIs are firstly pre-processed to correct for non uniformity using the non parametric, non uniformity intensity normalization algorithm. Subsequently, a logarithmic inverse scaling log(1/image) is applied, prior to segmentation, to better differentiate bone and air from soft-tissues. Finally, the following method is enrolled to classify intensities into air cavities, background, bone and soft-tissue:Thresholded region growing with seed points in image corners is applied to get a mask of Air+Bone+Background. The background is, afterward, separated by the scan-line filling algorithm. The air mask is extracted by morphological opening followed by a post-processing based on knowledge about air regions geometry. The remaining rough bone pre-segmentation is refined by applying 3D geodesic active contours; bone segmentation evolves by the sum of internal forces from contour geometry and external force derived from image gradient magnitude.Pseudo-CT is obtained by assigning −1000HU to air and background voxels, performing linear mapping of soft-tissue MR intensities in [-400HU, 200HU] and inverse linear mapping of bone MR intensities in [200HU, 1000HU]. Results: Three brain patients having registered MRI and CT are used for validation. CT intensities classification into 4 classes is performed by thresholding. Dice and misclassification errors are quantified. Correct classifications for soft-tissue, bone, and air are respectively 89.67%, 77.8%, and 64.5%. Dice indices are acceptable for bone (0.74) and soft-tissue (0.91) but low for air regions (0.48). Pseudo-CT produces DRRs with acceptable clinical visual agreement to CT-based DRR. Conclusion: The proposed approach makes it possible to use T1-weighted MRI to generate accurate pseudo-CT from 4-class segmentation.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

TU-AB-BRA-06: BEST IN PHYSICS (JOINT IMAGING-THERAPY): An MRI Compatible Externally and Internally Deformable Lung Motion Phantom for Multi-Modality IGRT

Purpose: MRI has become an attractive tool for tumor motion management. Current MR-compatible phantoms are only capable of reproducing translational motion. This study describes the construction and validation of a more realistic, MRI-compatible lung phantom that is deformable internally as well as externally. We demonstrate a radiotherapy application of this phantom by validating the geometric accuracy of the open-source deformable image registration software NiftyReg (UCL, UK). Methods: The outer shell of a commercially-available dynamic breathing torso phantom was filled with natural latex foam with eleven water tubes. A rigid foam cut-out served as the diaphragm. A high-precision programmable, in-house, MRI-compatible motion platform was used to drive the diaphragm. The phantom was imaged on a 3T scanner (Philips, Ingenia). Twenty seven tumor traces previously recorded from lung cancer patients were programmed into the phantom and 2D+t image sequences were acquired using a sparse-sampling sequence k-t BLAST (accn=3, resolution=0.66×0.66×5mm3; acquisition-time=110ms/slice). The geometric fidelity of the MRI-derived trajectories was validated against those obtained via fluoroscopy using the on board kV imager on a Truebeam linac. NiftyReg was used to perform frame by frame deformable image registration. The location of each marker predicted by using NiftyReg was compared with the values calculated by intensity-based segmentation on each frame. Results: In all cases, MR trajectories were within 1 mm of corresponding fluoroscopy trajectories. RMSE between centroid positions obtained from segmentation with those obtained by NiftyReg varies from 0.1 to 0.21 mm in the SI direction and 0.08 to 0.13 mm in the LR direction showing the high accuracy of deformable registration. Conclusion: We have successfully designed and demonstrated a phantom that can accurately reproduce deformable motion under a variety of imaging modalities including MRI, CT and x-ray fluodoscopy, making it an invaluable research tool for validating novel motion management strategies. This work was partially supported through research funding from National Institutes of Health (R01CA169102).

60 APPLIED LIFE SCIENCES↗
NASA NTRSDate not supplied

Leveraging Resonant Terminator Orbits for the Trajectory Design of OSIRIS-APEX at (99942) Apophis

The OSIRIS-REx spacecraft has been approved for an extended mission (OSIRIS-APEX) to visit the asteroid (99942) Apophis. In this paper we outline a potential design for the spacecraft’s trajectory during the variable phase orbit segment of the APEX mission. This phase of the mission, nominally expected to begin in January2030, has the primary goal of collecting image and spectral data of the full asteroid surface at a wide variety of illumination conditions without requiring frequent firing of the spacecraft thrusters. This work will focus on leveraging resonant terminator orbits (RTOs) in order to satisfy these goals and the associated science requirements. Though this segment will occur after Apophis’ closest flyby of Earth in April 2029, the proposed design utilizes the current best estimates of the asteroid’s orbital elements and physical properties at that time when designing the spacecraft’s orbit.

Gavin M Brown↗
DOE OSTI2020

Toward Real-Time Analysis of Synchrotron Micro-Tomography Data: Accelerating Experimental Workflows with AI and HPC

ynchrotron light sources are routinely used to perform imaging experiments. In this paper, we review the relevant computational stages, identify bottlenecks, and highlight future opportunities to streamline data acquisition for experimental microscopy workflows. We demonstrate our preliminary exploration with an end-to-end scientific workflow on Summit based on micro-computed tomography data. Computational elements include: 1) reconstruction of volumetric image data; 2) denoising with deep neural networks; and 3) non-local means based segmentation and quantitative analysis.

Mcclure, James↗
DOE OSTI2018

Controlling azimuthal spoke modes in a cylindrical Hall thruster using a segmented anode

Azimuthal spoke-like modes commonly occur in E × B discharges. The natural occurrence of the spoke mode is correlated with changes of plasma parameters. Here in this paper, instead of allowing these changes to occur naturally, we report a technique for actively controlling the spoke by adjusting the boundary condition at the anode. The technique is demonstrated using a cylindrical Hall thruster equipped with a segmented anode. By varying the voltage and the relative phases of the anode segments, properties of the azimuthal mode can be altered substantially, as shown by fast camera images and probe diagnostics. This technique may be extended to other Hall discharges in order to either induce or suppress azimuthal activities, and thereby controlling the operation and the performance of the devices.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2020

Electronic Scanning Strategies in Adaptive Electrical Capacitance Volume Tomography: Tradeoffs and Prospects

Electrical Capacitance Volume Tomography (ECVT) has been applied for imaging of multiphase flows found in industrial applications. The ill-posed nature of the image reconstruction problem in ECVT and the consequent low resolution can be alleviated by employing electronic scanning enabled by electrode segmentation and reconfiguration during data acquisition. Here we study electronic scanning strategies that mimic physical rotation and shifting of the sensor along its symmetry axis. First, we study the feasibility of electronic scanning by analyzing the capacitance transducer circuit in SPICE. Then, we simulate electronic scanning using the finite element method for different electrode shapes, for which we compare the image reconstruction results and acquisition time. We find a noticeable improvement in image resolution for the scanning cases over conventional ECVT. Lastly, among the scanning cases, we emphasize a particular electrode shape that provides the best image resolution along with the minimal amount of acquisition time.

47 OTHER INSTRUMENTATION↗
DOE OSTI2014

TH-E-BRF-08: Subpopulations of Similarly-Responding Lesions in Metastatic Prostate Cancer

Purpose: In patients with multiple lesions, resistance to cancer treatments and subsequent disease recurrence may be due to heterogeneity of response across lesions. This study aims to identify subpopulations of similarly-responding metastatic prostate cancer lesions in bone using quantitative PET metrics. Methods: Seven metastatic prostate cancer patients treated with AR-directed therapy received pre-treatment and mid-treatment [F-18]NaF PET/CT scans. Images were registered using an articulated CT registration algorithm and transformations were applied to PET segmentations. Midtreatment response was calculated on PET-based texture features. Hierarchical agglomerative clustering was used to form groups of similarly-responding lesions, with the number of natural clusters (K) determined by the inconsistency coefficient. Lesion clustering was performed within each patient, and for the pooled population. The cophenetic coefficient (C) quantified how well the data was clustered. The Jaccard Index (JI) assessed similarity of cluster assignments from patient clustering and from population clustering. Results: 188 lesions in seven patients were identified for analysis (between 6 to 53 lesions per patient). Lesion response was defined as percent change relative to pre-treatment for 23 uncorrelated PET-based feature identifiers. . High response heterogeneity was found across all lesions (i.e. range ΔSUVmax =−95.98% to 775.00%). For intra-patient clustering, K ranged from 1–20. Population-based clustering resulted in 75 clusters, of 1-6 lesions each. Intra-patient clustering resulted in higher quality clusters than population clustering (mean C=0.95, range=0.89 to 1.00). For all patients, cluster assignments from population clustering showed good agreement to intra-patient clustering (mean JI=0.87, range=0.68 to 1.00). Conclusion: Subpopulations of similarly-responding lesions were identified in patients with multiple metastatic lesions. Good agreement was found between population- and patient-level clustering, indicating that PET-based response features may be used to quantify disease heterogeneity in advanced metastatic disease. This method for categorizing lesion response could help in identifying lesions with similar phenotypic- or genetic-based resistances to therapy. Research Supported by the Prostate Cancer Foundation.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

Technical Note: A fast online adaptive replanning method for VMAT using flattening filter free beams

Purpose: To develop a fast replanning algorithm based on segment aperture morphing (SAM) for online replanning of volumetric modulated arc therapy (VMAT) with flattening filter free (FFF) beams. Methods: A software tool was developed to interface with a VMAT research planning system, which enables the input and output of beam and machine parameters of VMAT plans. The SAM algorithm was used to modify multileaf collimator positions for each segment aperture based on the changes of the target from the planning (CT/MR) to daily image [CT/CBCT/magnetic resonance imaging (MRI)]. The leaf travel distance was controlled for large shifts to prevent the increase of VMAT delivery time. The SAM algorithm was tested for 11 patient cases including prostate, pancreatic, and lung cancers. For each daily image set, three types of VMAT plans, image-guided radiation therapy (IGRT) repositioning, SAM adaptive, and full-scope reoptimization plans, were generated and compared. Results: The SAM adaptive plans were found to have improved the plan quality in target and/or critical organs when compared to the IGRT repositioning plans and were comparable to the reoptimization plans based on the data of planning target volume (PTV)-V100 (volume covered by 100% of prescription dose). For the cases studied, the average PTV-V100 was 98.85% ± 1.13%, 97.61% ± 1.45%, and 92.84% ± 1.61% with FFF beams for the reoptimization, SAM adaptive, and repositioning plans, respectively. The execution of the SAM algorithm takes less than 10 s using 16-CPU (2.6 GHz dual core) hardware. Conclusions: The SAM algorithm can generate adaptive VMAT plans using FFF beams with comparable plan qualities as those from the full-scope reoptimization plans based on daily CT/CBCT/MRI and can be used for online replanning to address interfractional variations.

60 APPLIED LIFE SCIENCES↗
NASA NTRS1982

LANDSAT-D accelerated payload correction subsystem output computer compatible tape format

The NASA GSFC LANDSAT-D Ground Segment (GS) is developing an Accelerated Payload Correction Subsystem (APCS) to provide Thematic Mapper (TM) image correction data to be used outside the GS. This correction data is computed from a subset of the TM Payload Correction Data (PCD), which is downlinked from the spacecraft in a 32 Kbps data stream, and mirror scan correction data (MSCD), which is extracted from the wideband video data. This correction data is generated in the GS Thematic Mapper Mission Management Facility (MMF-T), and is recorded on a 9-track 1600 bit per inch computer compatible tape (CCT). This CCT is known as a APCS Output CCT (AOT). The AOT follows standardized corrections with respect to data formats, record construction and record identification. Applicable documents are delineated; common conventions which are used in further defining the structure, format and content of the AOT are defined; and the structure and content of the AOT are described.

Source record↗
NASA NTRS1982

LANDSAT-D Mission System Industry Briefing

Viewgraphs and photographs depict the scope and purpose of the LANDSAT 4 mission as well as all satellite systems. The components and major functions of the flight and ground segments, operational support, communication links, and the hardware and interfaces for processing MSS and TM images are covered.

Source record↗
NASA NTRS1993

Algorithms For Segmentation Of Complex-Amplitude SAR Data

Several algorithms implement improved method of segmenting highly speckled, high-resolution, complex-amplitude synthetic-aperture-radar (SAR) digitized images into regions, within each backscattering characteristics similar or homogeneous from place to place. Method provides for approximate, deterministic solution by two alternative algorithms almost always converging to local minimums: one, Iterative Conditional Modes (ICM) algorithm, which locally maximizes posterior probability density of region labels; other, Maximum Posterior Marginal (MPM) algorithm, which maximizes posterior marginal density of region labels at each pixel location. ICM algorithm optimizes reconstruction of underlying scene. MPM algorithm minimizes expected number of misclassified pixels, possibly better in remote sensing of natural scenes.

Rignot, Eric J. M.↗
NASA NTRS1996

Cirrus Cloud Optical and Morphological Variations within a Mesoscale Volume

Cirrus cloud optical and structural properties were measured above southern Wisconsin in two time segments between 18:07 and 21:20 GMT on December 1, 1989 by the volume imaging lidar (VIL) and the High Spectral Resolution Lidar (HSRL) and the visible infrared spin scan radiometer (VISSR) atmospheric sounder (VAS) on GOES. A new technique was used to calculate the cirrus cloud visible aerosol backscatter cross sections for a single channel elastic backscatter lidar. Cirrus clouds were viewed simultaneously by the VIL and the HSRL. This allowed the HSRL aerosol backscatter cross sections to be directly compared to the VIL single channel backscattered signal. This first attempt resulted in an adequate calibration. The calibration was extended to all the cirrus clouds in the mesoscale volume imaged by the VIL.

Wolf, Walter W.↗
NASA NTRSDate not supplied

Automated Tracking of Shallow Maritime Clouds on Geostationary Imagery to Extract Lifecycle Characteristics

Shallow moist convection is ubiquitous throughout the tropics and represents a key player in boundary layer processes. Satellites have provided many statistics on shallow clouds, such as size, structure, and geographical coverage, from static views of recurring cloud fields. But determining why certain cloud features appear and persist for different periods requires a time-evolving view of their behaviors. Geostationary satellites provide a unique opportunity to follow the time evolution of individual convective features, given their enhanced spatial and temporal sampling. A cloud-tracking tool was developed to identify properties of cloud lifecycle from the NASA Cloud, Aerosol, and Monsoon Processes Philippines Experiment (CAMP2EX) field campaign of 2019. The mission conducted intensive sampling of shallow cumulus in the West Pacific Ocean, in tandem with Rapid Scan imagery from the Advanced Himawari Imager (AHI) on the Japan Meteorological Agency’s (JMA) Himawari-8 satellite. Shallow cumulus was segmented according to thresholds in 0.5-km visible reflectance and with blurring techniques. Despite being limited to daytime hours, the segmentations yielded the best resolution possible for capturing cloud initiation and decay. The tracking procedure is based on a computer vision package that includes Kalman filters for motion prediction, object overlap search, and the Hungarian (or Kuhn-Munkres) matching algorithm for track designation. AHI radiances available within the tracked cloud boundaries are assembled to form individual spectral histories. The resulting catalog provides thousands of cloud histories for domains measuring only a few degrees in latitude and longitude. We present an overview of the cloud-tracking tool, strategies to identify development stages from cloud tracks, and preliminary results that document cumulus lifecycle properties from satellite. The application of AHI 0.5-km reflectance has both strengths and limitations when attempting to track lifecycles of the smallest resolvable clouds. We show that by aggregating cloud tracks from a few case studies of CAMP2EX, we can discern differences in cloud lifetime and development according to ensembles selected from areas of interest. The results demonstrate an ability to quantify lifetimes and assess rates of change in cloud characteristics that are likely controlled by the surrounding environment and meteorology.

Cloud Tracking↗
NASA NTRSDate not supplied

Automated Tracking of Shallow Maritime Clouds on Geostationary Imagery to Extract Lifecycle Characteristics

Shallow moist convection is ubiquitous throughout the tropics and represents a key player in boundary layer processes. Satellites have provided valuable insight on shallow clouds, such as size, structure, and geographical coverage, from static views of recurring cloud fields. But determining why certain cloud features appear and persist for different periods requires a time-evolving view of their behaviors. Geostationary satellites provide a unique opportunity to follow the time evolution of individual convective features, given their enhanced spatial and temporal sampling. A cloud-tracking tool was developed to identify properties of cloud lifecycle from the NASA Cloud, Aerosol, and Monsoon Processes Philippines Experiment (CAMP2EX) field campaign of 2019. The mission conducted intensive sampling of shallow cumulus in the West Pacific Ocean, in tandem with Rapid Scan imagery from the Advanced Himawari Imager (AHI) on the Japan Meteorological Agency’s (JMA) Himawari-8 satellite. Shallow cumulus were segmented according to thresholds in 0.5-km visible reflectance and with blurring techniques. Despite being limited to daytime hours, the segmentations yielded the best resolution available for capturing cloud initiation, growth, and decay. The tracking procedure is based on a computer vision package that includes Kalman filters for motion prediction, object overlap search, and the Hungarian (or Kuhn-Munkres) matching algorithm for track designation. AHI radiances available within the tracked cloud boundaries are assembled to form individual spectral histories. The resulting catalog provides thousands of cloud histories for domains measuring only a few degrees in latitude and longitude. We present an overview of the cloud-tracking tool and its results for cloud fields sampled throughout CAMP2EX by the airborne P-3. Cloud tracks were selected from about 10 flights to form ensembles, specific groups of tracks occurring in a region with airborne sampling. Cloud lifecycle properties, including duration and maximum area, are calculated for all ensemble members, and analyzed for cloud behavior and P-3 coincidences. By following this strategy, we quantitatively assess the degree of airborne sampling for specific cloud classes defined by the lifecycle calculations. We can summarize which cloud classes had more sampling, the stage of development during sampling, and general differences in character (e.g., isolated congestus vs. cold-pool producer).

Cloud Tracking↗
NASA NTRSDate not supplied

Automated Tracking of Shallow Cu Growth Rates on Geostationary Imagery and Linkages to Cloud Organization

Shallow moist convection is ubiquitous throughout the tropics and represents a key player in boundary layer processes. Common tropical cloud features, such as convective rolls and cold pool fronts, form and persist for different periods within environments that support such development. Determining differences in lifecycle amongst these features in varying environments requires viewing their evolution from initiation to decay. Geostationary satellites provide a means to follow the clouds with enhanced spatiotemporal sampling from space. We apply a cloud-tracking tool to study lifecycle properties of shallow cumulus sampled during the NASA Cloud, Aerosol, and Monsoon Processes Philippines Experiment (CAMP2Ex) field campaign of 2019. The mission conducted airborne and shipborne operations over the West Pacific Ocean, in tandem with Rapid Scan imagery from the Advanced Himawari Imager (AHI) on the Japan Meteorological Agency’s (JMA) Himawari-8 satellite. Shallow cumulus was segmented on AHI 0.5-km visible reflectance and tracked during the daylit hours of several research flights that exhibited ideal atmospheric conditions for tracking. The resulting cloud tracks were collected according to regions containing airborne sampling of individual clouds at various stages of their lifecycles, yielding ensembles of tracks in separate environments. We present an analysis on lifecycle properties extracted from the cloud-track ensembles and their potential connections to cloud organizations observed throughout CAMP2Ex. Each ensemble is evaluated by calculating cloud-layer growth rates and comparing to spatial parameters, including track-achieved area and cloud-top height. The apparent clustering of growth rates for specific ensembles is then compared against overall cloud organizations, such as isolated congestus and cold pool fronts, that are observed with the airborne data. Finally, we consider how such differences in cloud growth appear in the airborne radar observations of intercepted cloud tracks.

Cloud Tracking↗
NASA NTRS1975

Faults on Skylab imagery of the Salton Trough area, Southern California

The author has identified the following significant results. Large segments of the major high angle faults in the Salton Trough area are readily identifiable in Skylab images. Along active faults, distinctive topographic features such as scarps and offset drainage, and vegetation differences due to ground water blockage in alluvium are visible. Other fault-controlled features along inactive as well as active faults visible in Skylab photography include straight mountain fronts, linear valleys, and lithologic differences producing contrasting tone, color or texture. A northwestern extension of a fault in the San Andreas set, is postulated by the regional alignment of possible fault-controlled features. The suspected fault is covered by Holocene deposits, principally windblown sand. A northwest trending tonal change in cultivated fields across Mexicali Valley is visible on Skylab photos. Surface evidence for faulting was not observed; however, the linear may be caused by differences in soil conditions along an extension of a segment of the San Jacinto fault zone. No evidence of faulting could be found along linears which appear as possible extensions of the Substation and Victory Pass faults, demonstrating that the interpretation of linears as faults in small scale photography must be corroborated by field investigations.

Merifield, P. M.↗