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At least 1,495 records · Page 83

Rediscovering Apollo Biomedical Data to Support Artemis: The Apollo Records Synthesis Project

With the first crewed missions of the Artemis Program on the horizon, including the return of humans to another planetary surface, the space medicine and research communities have a renewed interest in buying down risk on these missions using historic Apollo datasets. Archivists with NASA’s Life Sciences Data Archive (LSDA) and epidemiologists with the Lifetime Surveillance of Astronaut Health (LSAH) are collaborating on a project aiming at improving access to historic datasets from the Apollo Program. The Apollo Records Synthesis Project (ARSP) seeks to expand the available historic biomedical knowledge base by examining physical records located across a wide range of collections, including examples such as pre-flight and post-flight physicals, lab reports, and handwritten flight surgeon and biomedical engineer logs from Apollo missions. The ARSP team has been able to identify several previously undocumented sources of biomedical information from Apollo missions. In the future, the team will modernize record storage and accessibility of these resources using digitization and natural language processing. This poster will discuss the progress of the project, give context to the dual research-clinical care nature of the records, and highlight the challenges and opportunities in using data from historical records. This poster will also provide information on how researchers can request access to datasets from these records.

life sciences↗

PDBx/mmCIF Ecosystem: Foundational Semantic Tools for Structural Biology

PDBx/mmCIF, Protein Data Bank Exchange (PDBx) macromolecular Crystallographic Information Framework (mmCIF), has become the data standard for structural biology. With its early roots in the domain of small-molecule crystallography, PDBx/mmCIF provides an extensible data representation that is used for deposition, archiving, remediation, and public dissemination of experimentally determined three-dimensional (3D) structures of biological macromolecules by the Worldwide Protein Data Bank (wwPDB, wwpdb.org). Extensions of PDBx/mmCIF are similarly used for computed structure models by ModelArchive (modelarchive.org), integrative/hybrid structures by PDB-Dev (pdb-dev.wwpdb.org), small angle scattering data by Small Angle Scattering Biological Data Bank SASBDB (sasbdb.org), and for models computed generated with the AlphaFold 2.0 deep learning software suite (alphafold.ebi.ac.uk). Community-driven development of PDBx/mmCIF spans three decades, involving contributions from researchers, software and methods developers in structural sciences, data repository providers, scientific publishers, and professional societies. Having a semantically rich and extensible data framework for representing a wide range of structural biology experimental and computational results, combined with expertly curated 3D biostructure data sets in public repositories, accelerates the pace of scientific discovery. Herein, we describe the architecture of the PDBx/mmCIF data standard, tools used to maintain representations of the data standard, governance, and processes by which data content standards are extended, plus community tools/software libraries available for processing and checking the integrity of PDBx/mmCIF data. Use cases exemplify how the members of the Worldwide Protein Data Bank have used PDBx/mmCIF as the foundation for its pipeline for delivering Findable, Accessible, Interoperable, and Reusable (FAIR) data to many millions of users worldwide.

59 BASIC BIOLOGICAL SCIENCES↗

Science of the Van Allen Probes Science Operations Centers

The Van Allen Probes mission operations materialized through a distributed model in which operational responsibility was divided between the Mission Operations Center (MOC) and separate instrument specific SOCs. The sole MOC handled all aspects of telemetering and receiving tasks as well as certain scientifically relevant ancillary tasks. Each instrument science team developed individual instrument specific SOCs proficient in unique capabilities in support of science data acquisition, data processing, instrument performance, and tools for the instrument team scientists. In parallel activities, project scientists took on the task of providing a significant modeling tool base usable by the instrument science teams and the larger scientific community. With a mission as complex as Van Allen Probes, scientific inquiry occurred due to constant and significant collaboration between the SOCs and in concert with the project science team. Planned cross-instrument coordinated observations resulted in critical discoveries during the seven-year mission. Instrument cross-calibration activities elucidated a more seamless set of data products. Specific topics include post-launch changes and enhancements to the SOCs, discussion of coordination activities between the SOCs, SOC specific analysis software, modeling software provided by the Van Allen Probes project, and a section on lessons learned. One of the most significant lessons learned was the importance of the original decision to implement individual team SOCs providing timely and well-documented instrument data for the NASA Van Allen Probes Mission scientists and the larger magnetospheric and radiation belt scientific community.

47 OTHER INSTRUMENTATION↗

Evaluation of the VIIRS Land Algorithms at Land PEATE

The Land Product Evaluation and Algorithm Testing Element (Land PEATE), a component of the Science Data Segment of the National Polar-orbiting Operational Environmental Satellite System (NPOESS) Preparatory Project (NPP), is being developed at the NASA Goddard Space Flight Center (GSFC). The primary task of the Land PEATE is to assess the quality of the Visible Infrared Imaging Radiometer Suite (VIIRS) Land data products made by the Interface Data Processing System (IDPS) using the Operational (OPS) Code during the NPP era and to recommend improvements to the algorithms in the IDPS OPS code. The Land PEATE uses a version of the MODIS Adaptive Processing System (MODAPS), NPPDAPS, that has been modified to produce products from the IDPS OPS code and software provided by the VIIRS Science Team, and uses the MODIS Land Data Operational Product Evaluation (LDOPE) team for evaluation of the data records generated by the NPPDAPS. Land PEATE evaluates the algorithms by comparing data products generated using different versions of the algorithm and also by comparing to heritage products generated from different instrument such as MODIS using various quality assessment tools developed at LDOPE. This paper describes the Land PEATE system and some of the approaches used by the Land PEATE for evaluating the VIIRS Land algorithms during the pre-launch period of the NPP mission and the proposed plan for long term monitoring of the quality of the VIIRS Land products post-launch.

Wolfe, Robert E.↗

Land Surface Temperature Measurements from EOD MODIS Data

We made more tests of the version 2.0 daily Level 2 and Level 3 Land-Surface Temperature (LST) code (PGE 16) jointly with the MODIS Science Data Support Team (SDST). After making minor changes a few times, the PGE16 code has been successfully integrated and tested by MODIS SDST, and recently has passed the inspection at the Goddard Distributed Active Archive Center (DAAC). We conducted a field campaign in the area of Mono Lake, California on March 10, 1998, in order to validate the MODIS LST algorithm in cold and dry conditions. Two MODIS Airborne Simulator (MAS) flights were completed during the field campaign, one before noon, and another around 10 pm PST. The weather condition for the daytime flight was perfect: clear sky, the column water vapor measured by radiosonde around 0.3 cm, and wind speed less than a half meter per second. The quality of MAS data is good for both day and night flights. We analyzed the noise equivalent temperature difference (NE(delta)T) and the calibration accuracy of the seven MAS thermal infrared (TIR) bands, that are used in the MODIS day/night LST algorithm, with daytime MAS data over four flat homogeneous study areas: two on Grant Lake (covered with ice and snow, respectively), one on Mono Lake, and another on the snow field site where we made field measurements. NE(delta)T ranges from 0.2 to 0.6 k for bands 42, 45, 46, and 48. It ranges from 0.8 to 1.1 K for bands 30-32. The day and night MAS data have been used to retrieve surface temperature and emissivities in these bands. A simple method to correct the effect of night thin cirrus has been incorporated into the day/night LST algorithm in dry atmospheric conditions. We compared the retrieved surface temperatures with those measured with TIR spectrometer, radiometers and thermistors in the snow test site, and the retrieved emissivity images with topographic map. The daytime LST values match well within 1 K. The night LST retrieved from MAS data is 3.3 K colder than those from field measurements most likely because of the effect of haze at night. The good agreement among the regional averaged surface temperatures obtained from LST values retrieved at different resolutions increased our confidence in the MODIS day/night LST algorithm.

Wan, Zheng-Ming↗

A Summary of the Quasi-Steady Acceleration Environment on-Board STS-94 (MSL-1)

The continuous free-fall state of a low Earth orbit experienced by NASA's Orbiters results in a unique reduced gravity environment. While microgravity science experiments are conducted in this reduced gravity environment, various accelerometer systems measure and record the microgravity acceleration environment for real-time and post-flight correlation with microgravity science data. This overall microgravity acceleration environment is comprised of quasi-steady, oscillatory, and transient contributions. The First Microgravity Science Laboratory (MSL-1) payload was dedicated to experiments studying various microgravity science disciplines, including combustion, fluid physics, and materials processing. In support of the MSL-1 payload, two systems capable of measuring the quasi-steady acceleration environment were flown: the Orbital Acceleration Research Experiment (OARE) and the Microgravity Measurement Assembly (MMA) system's Accelerometre Spatiale Triaxiale most evident in the quasi-steady acceleration regime. Utilizing such quasi-steady events, a comparison and summary of the quasi-steady acceleration environment for STS-94 will be presented

McPherson, Kevin M.↗

GRACE-Assimilated Drought Indicators for the U.S. Drought Monitor

The Gravity Recovery and Climate Experiment (GRACE) mission detects changes in Earth's gravity field by precisely monitoring the changes in distance between two satellites orbiting the Earth in tandem. Scientists at NASA's Goddard Space Flight Center generate GRACE-assimilated groundwater and soil moisture drought indicators each week, for drought monitor-related studies and applications. The GRACE-assimilated Drought Indicator Version 2.0 data product (GRACE-DA-DM V2.0) is archived at, and distributed by, the NASA GES DISC (Goddard Earth Sciences Data and Information Services Center). More information about the data and data access is available on the data product landing page at https://disc.gsfc.nasa.gov/datasets /GRACEDADM_CLSM0125US_7D_2.0/summary. The GRACE-DA-DM V2.0 data product contains three drought indicators: Groundwater Percentile, Root Zone Soil Moisture Percentile, and Surface Soil Moisture Percentile. The drought indicators are of wet or dry conditions, expressed as a percentile, indicating the probability of occurrence within the period of record from 1948 to 2012. These GRACE-assimilated drought indicators, with improved spatial and temporal resolutions, should provide a more comprehensive and objective identification of drought conditions. This presentation describes the basic characteristics of the data and data services at NASA GES DISC and collaborative organizations, and uses a few examples to demonstrate the simple ways to explore the GRACE-assimilated drought indicator data.

hydrology↗

Initial Operations Experience and Results from the Juno Gravity Experiment

Radio communications between the Juno spacecraft, in orbit around Jupiter, and the Earth-based observing stations of NASA’s Deep Space Network enable measurements of the Doppler shift induced on the radio signals by Juno’s motion in the Jovian environment. This measurement of the Doppler shift improves the knowledge of Jupiter’s gravitational field. As a radio science instrument, Juno’s gravity science instrument utilizes a ground component at the Deep Space Network’s DSS-25 antenna, equipped with simultaneous dual X- and Ka-band transmitters and receivers, and a spacecraft component, which includes X- and Ka-band transponders to relay the transmitted signal back to Earth. Originally planned to be in 14-day orbits around Jupiter, a risk identified in the propulsion system led to the decision to stay in the 53-day orbit period. Rapid turnaround of observation planning led to successful near-term perijove passes. Although maintaining a 53-day orbit period provides a scientific benefit to the gravity science investigation, the longer orbit period further increases the large dynamic range in Doppler shift and pointing angles induced by the geometry of each perijove. Between entering orbit at Jupiter on July 5, 2016 and September 2017, the Juno spacecraft has executed eight closest approach periods every 53 days where science data was collected. The first five perijove passes were conducted in different telecom configurations, each presenting unique challenges in data collection and processing. Perijoves PJ-01, PJ-02, PJ-03, and PJ-06 utilized the high-gain antenna and various configurations of the X- and Ka-bands. Perijoves PJ-04 and PJ-05 utilized the medium-gain antenna at X-band only while the spacecraft was off-Earth point. Additional perijoves are planned every 53-days, with an additional five by March 2018. Lessons learned from operating and collecting data at each perijove are documented and will be utilized in future perijoves. Analysis of the first two gravity science perijoves has improved the precision of Jupiter’s gravity field by a factor of five, providing crucial constraints on the interior structure of Jupiter.

Buccino, Dustin↗

THz Technology for Space Communications

As space instruments become ubiquitous along with advancing capabilities, one of the central challenge is to provide more efficient communication links, between the control center and the instrument or between a cluster of satellites or instruments. Similarly, high-data rate communications between a mother ship and a lander is highly desirable not only for navigation but for science data as well. THz communications systems present a number of advantages in implementing efficient data-links between various scenarios for space applications. This review article will discuss some of the recent advances in solid-state coherent sources that has now made it possible to design and implement THz communication systems specifically for space applications. An example architecture at 240 GHz has been suggested as it is now possible to achieve >100 mW of output power at 240 GHz. With highly sensitive and linear heterodyne mixers, such a system could potentially provide higher data rate capability than in use today.

Jornet, Josep M.↗

THz technology for space communications

As space instruments become ubiquitous along with advancing capabilities, one of the central challenge is to provide more efficient communication links, between the control center and the instrument or between a cluster of satellites or instruments. Similarly, high-data rate communications between a mother ship and a lander is highly desirable not only for navigation but for science data as well. THz communications systems present a number of advantages in implementing efficient data-links between various scenarios for space applications. This review article will discuss some of the recent advances in solid-state coherent sources that has now made it possible to design and implement THz communication systems specifically for space applications. An example architecture at 240 GHz has been suggested as it is now possible to achieve >100 mW of output power at 240 GHz. With highly sensitive and linear heterodyne mixers, such a system could potentially provide higher data rate capability than in use today.

Jornet, Josep M.↗

Multidimensional Data Aggregation in the Cloud with Application to Geostationary Satellite-based Air Quality Monitoring

Scientists use satellite data for studying Earth's systems, and the remote sensing data that these satellites collect are typically separated into files of a size small enough for efficient network transfer and storage. However, researchers usually prefer to analyze the data based on real-world dimensions like time, space, or elevation. To help with this, NASA's Atmospheric Science Data Center (ASDC) developed a new cloud-based tool that combines these smaller data chunks into larger, more useful datasets. The tool works on Network Common Data Form (netCDF4) and some HDF5 formatted files, and it is available as a service in NASA's Earthdata Cloud. In this presentation, we showcase this service using data from the Tropospheric Emissions: Monitoring of Pollution (TEMPO) instrument. By combining TEMPO's continuous observations over time, we create longer and more informative analysis-ready time series to facilitate the study of air quality patterns. Insights gained will provide a more comprehensive understanding of pollution sources, transport patterns, and their effects on the environment and human health.

Daniel Kaufman↗

Work on Planetary Atmospheres and Planetary Atmosphere Probes

A major objective of the grant was to complete the fabrication, test, and evaluation of the atmosphere structure experiment on the Galileo Probe, and to receive, analyze, and interpret data received from the spacecraft. The grantee was competitively selected to be Principal Investigator of Jupiter's atmosphere structure on the Galileo Probe. His primary motivation was to learn as much as possible about Jupiter's atmosphere by means of a successful atmosphere structure experiment, and to support the needs and schedule of the Galileo Project. After a number of launch delays, the Flight instrument was shipped to Kennedy Space Center 2 years after the start of this collaboration, on April 14, 1989, at which time it was determined from System level tests of the ASI on the Probe that the instrument was in good working order and ready for flight. The spacecraft was launched on October 18, 1989. Data analysis of test and calibration data taken over a period of years of instrument testing was continued in preparation for the encounter. The initial instrument checkout in space was performed on October 26, 1989. The data set received by telemetry was thoroughly analyzed, and a report of the findings was transmitted to the Probe Operations Office on Feb. 28, 1990. Key findings reported were that the accelerometer biases had shifted by less than 1 mg through launch and since calibration at Bell Aerospace in 1983; accelerometer scale factors, evaluated by means of calibration currents, fell on lines of variation with temperature established in laboratory calibrations; pressure sensor offsets, correlated as a function of temperature, fell generally within the limits of several years of ground test data; atmospheric and engineering temperature sensor data were internally consistent within a few tenths of a degree; and the instrument electronics performed all expected functions without any observable fault. Altogether, this checkout was highly encouraging of the prospects of instrument performance, although performed greater than 5 years prior to Jupiter encounter. Capability of decoding the science data from the Experiment Data Record to be provided at encounter was developed and exercised using the tape recording of the first Cruise Checkout data. A team effort was organized to program the selection and combination of data words defining pressure, temperature, acceleration, turbulence, and engineering quantities; to apply decalibration algorithms to convert readings from digital numbers to physical quantities; and to organize the data into a suitable printout. A paper on the Galileo Atmosphere Structure Instrument was written and submitted for publication in a special issue of Space Science Reviews. At the Journal editor's request, the grantee reviewed other Probe instrument papers submitted for this special issue. Calibration data were carefully taken for all experiment sensors and accumulated over a period of 10 years. The data were analyzed, fitted with algorithms, and summarized in a calibration report for use in analyzing and interpreting data returned from Jupiter's atmosphere. The sensors included were the primary science pressure, temperature, and acceleration sensors, and the supporting engineering temperature sensors. This report was distributed to experiment coinvestigators and the Probe Project Office.

Seiff, Alvin↗

Data and information system requirements for Global Change Research

Efforts to develop local information systems for supporting interdisciplinary Global Change Research are described. A prototype system, the Interdisciplinary Science Data and Information System (IDS-DIS), designed to interface the larger archives centers of EOS-DIS is presented. Particular attention is given to a data query information management system (IMS), which has been used to tabulate information of Landsat data worldwide. The use of these data in a modeling analysis of deforestation and carbon dioxide emissions is demonstrated. The development of distributed local information systems is considered to be complementary to the development of central data archives. Global Change Research under the EOS program is likely to result in proliferation of data centers. It is concluded that a distributed system is a feasible and natural way to manage data and information for global change research.

Skole, David L.↗

Global Long-Term SeaWiFS Deep Blue Aerosol Products available at NASA GES DISC

Long-term climate data records about aerosols are needed in order to improve understanding of air quality, radiative forcing, and for many other applications. The Sea-viewing Wide Field-of-view Sensor (SeaWiFS) provides a global well-calibrated 13- year (1997-2010) record of top-of-atmosphere radiance, suitable for use in retrieval of atmospheric aerosol optical depth (AOD). Recently, global aerosol products derived from SeaWiFS with Deep Blue algorithm (SWDB) have become available for the entire mission, as part of the NASA Making Earth Science data records for Use in Research for Earth Science (MEaSUREs) program. The latest Deep Blue algorithm retrieves aerosol properties not only over bright desert surfaces, but also vegetated surfaces, oceans, and inland water bodies. Comparisons with AERONET observations have shown that the data are suitable for quantitative scientific use [1],[2]. The resolution of Level 2 pixels is 13.5x13.5 km2 at the center of the swath. Level 3 daily and monthly data are composed by using best quality level 2 pixels at resolution of both 0.5ox0.5o and 1.0ox1.0o. Focusing on the southwest Asia region, this presentation shows seasonal variations of AOD, and the result of comparisons of 5-years (2003- 2007) of AOD from SWDB (Version 3) and MODIS Aqua (Version 5.1) for Dark Target (MYD-DT) and Deep Blue (MYD-DB) algorithms.

Shen, Suhung↗

In-depth analysis on parallel processing patterns for high-performance Dataframes

The Data Science domain has expanded monumentally in both research and industry communities during the past decade, predominantly owing to the Big Data revolution. Artificial Intelligence (AI) and Machine Learning (ML) are bringing more complexities to data engineering applications, which are now integrated into data processing pipelines to process terabytes of data. Typically, a significant amount of time is spent on data preprocessing in these pipelines, and hence improving its efficiency directly impacts the overall pipeline performance. The community has recently embraced the concept of Dataframes as the de-facto data structure for data representation and manipulation. However, the most widely used serial Dataframes today (R, pandas) experience performance limitations while working on even moderately large data sets. We believe that there is plenty of room for improvement by taking a look at this problem from a high-performance computing point of view. In a prior publication, we presented a set of parallel processing patterns for distributed dataframe operators and the reference runtime implementation, Cylon. In this paper, we are expanding on the initial concept by introducing a cost model for evaluating the said patterns. Furthermore, we evaluate the performance of Cylon on the ORNL Summit supercomputer.

97 MATHEMATICS AND COMPUTING↗

Exascale applications: skin in the game

As noted in Wikipedia, skin in the game refers to having ‘incurred risk by being involved in achieving a goal’, where ‘ skin is a synecdoche for the person involved, and game is the metaphor for actions on the field of play under discussion’. For exascale applications under development in the US Department of Energy Exascale Computing Project, nothing could be more apt, with the skin being exascale applications and the game being delivering comprehensive science-based computational applications that effectively exploit exascale high-performance computing technologies to provide breakthrough modelling and simulation and data science solutions. These solutions will yield high-confidence insights and answers to the most critical problems and challenges for the USA in scientific discovery, national security, energy assurance, economic competitiveness and advanced healthcare. This article is part of a discussion meeting issue ‘Numerical algorithms for high-performance computational science’.

97 MATHEMATICS AND COMPUTING↗

Curating Carbon Storage Data for Reuse: Enabling Research and Modeling from Earth’s Surface to Subsurface

The volume of public geologic carbon storage (GCS) data resources has continued to increase in recent years as the result of an increase in funding from government, industry, and academia towards national, basin, regional and field scale studies to ensure carbon capture and storage becomes a commercially viable operation. Despite the increasing volume of data, GCS data applied towards analyses such as geologic, cost, and risk modeling continues to be multi-sourced and often disparate in nature, published across government agencies, websites, data repositories and buried in derivative reports and documents. Much of the time preparing for an analysis and derivative product development is spent collecting, aggregating, transforming and preparing input data. There have been significant efforts within the DOE National Energy Technology Laboratory’s Carbon Storage Program to optimize multi-source, multi-scale subsurface geologic data curation and aggregation to support data discovery, interoperability, and reuse. Methods include the use of artificial intelligence, machine learning, and data science techniques. This talk will discuss the workflows, best practices, and processes developed to support the aggregation and curation of data through the whole system – surface to subsurface data - that support multi-scale, multi-purpose analysis for carbon storage research.

Morkner, Paige↗

Optimizing Batch Crystallization with Model-based Design of Experiments

Adaptive and self-optimizing intelligent systems such as digital twins are increasingly important in science and engineering. Digital twins utilize mathematical models to provide added precision to decision-making. However, physics-informed models are challenging to build, calibrate, and validate with existing data science methods. Model-based design of experiments (MBDoE) is a popular framework for optimizing data collection to maximize parameter precision in mathematical models and digital twins. In this work, we apply MBDoE, facilitated by the open-source package Pyomo.DoE, to train and validate mathematical models for batch crystallization. We quantitatively examined the estimability of the model parameters for experiments with different cooling rates. This analysis provides a quantitative explanation for the heuristic of using multiple experiments at different cooling rates.

Lynch, Hailey↗