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DOE OSTI2022

Progress toward a universal biomedical data translator

Clinical, biomedical, and translational science has reached an inflection point in the breadth and diversity of available data and the potential impact of such data to improve human health and well-being. However, the data are often siloed, disorganized, and not broadly accessible due to discipline-specific differences in terminology and representation. To address these challenges, the Biomedical Data Translator Consortium has developed and tested a pilot knowledge graph-based “Translator” system capable of integrating existing biomedical data sets and “translating” those data into insights intended to augment human reasoning and accelerate translational science. Having demonstrated feasibility of the Translator system, the Translator program has since moved into development, and the Translator Consortium has made significant progress in the research, design, and implementation of an operational system. Herein, we describe the current system’s architecture, performance, and quality of results. We apply Translator to several real-world use cases developed in collaboration with subject-matter experts. Finally, we discuss the scientific and technical features of Translator and compare those features to other state-of-the-art, biomedical graph-based question-answering systems.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2022

Unified many-worlds browsing of arbitrary physics-based animations

Manually tuning physics-based animation parameters to explore a simulation outcome space or achieve desired motion outcomes can be notoriously tedious. This problem has motivated many sophisticated and specialized optimization-based methods for fine-grained (keyframe) control, each of which are typically limited to specific animation phenomena, usually complicated, and, unfortunately, not widely used. In this paper, we propose Unified Many-Worlds Browsing (UMWB), a practical method for sample-level control and exploration of physics-based animations. Our approach supports browsing of large simulation ensembles of arbitrary animation phenomena by using a unified volumetric WORLDPACK representation based on spatiotemporally compressed voxel data associated with geometric occupancy and other low-fidelity animation state. Beyond memory reduction, the WORLDPACK representation also enables unified query support for interactive browsing: it provides fast evaluation of approximate spatiotemporal queries, such as occupancy tests that find ensemble samples ("worlds") where material is either IN or NOT IN a user-specified spacetime region. WORLDPACKS also support real-time hardware-accelerated voxel rendering by exploiting the spatially hierarchical and temporal RLE raster data structure. Our UMWB implementation supports interactive browsing (and offline refinement) of ensembles containing thousands of simulation samples, and fast spatiotemporal queries and ranking. We show UMWB results using a wide variety of physics-based animation phenomena---not just JELL-O ® .

Computer Science↗

DOE OSTI2022

Experimental study of UV induced tensile properties deterioration and chemical aging of polyurea–POSS composites

Ultraviolet (UV) radiation present in natural sunlight degrades the chemical and mechanical properties of polymeric matrices in composites. Polyurea possess a unique set of chemical and mechanical properties due to its complex microstructure comprising of hard and soft segments (phases). The primary objective of the work presented here is to characterize the chemical and mechanical degradation of pure polyurea and polyurea - polyhedral oligomeric silsesquioxane (POSS) nanocomposites subjected to UV radiation exposure for 45 days. Control specimen in as-received condition (reference specimen) and UV-aged tensile test specimen are tested in the study. Analysis of Fourier transformed infrared (FTIR) spectra for UV-aged polyurea and polyurea-POSS composites reveals that the addition of POSS nanoparticles accelerate the deterioration of polyurea matrix by breaking the hard phase network and altering the mechanism of degradation for the soft phase present in polyurea microstructure. The deterioration of hard and soft segments cause a significant reduction in tensile properties of polyurea-POSS composites.

Materials Science↗

DOE OSTI2021

Computational Offload with BlueField Smart NICs

The recent introduction of a new generation of "smart NICs" have provided new accelerator platforms that include CPU cores or reconfigurable fabric in addition to traditional networking hardware and packet offloading capabilities. While there are currently several proposals for using these smartNICs for low-latency, in-line packet processing operations, there remains a gap in knowledge as to how they might be used as computational accelerators for traditional high-performance applications. This work aims to look at benchmarks and mini-applications to evaluate possible benefits of using a smartNIC as a compute accelerator for HPC applications. We investigate NVIDIA's current-generation BlueField-2 card, which includes eight Arm CPUs along with a small amount of storage, and we test the networking and data movement performance of these cards compared to a standard Intel server host. We then detail how two different applications, YASK and miniMD can be modified to make more efficient use of the BlueField-2 device with a focus on overlapping computation and communication for operations like neighbor building and halo exchanges. Our results show that while the overall compute performance of these devices is limited, using them with a modified miniMD algorithm allows for potential speedups of 5 to 20% over the host CPU baseline with no loss in simulation accuracy.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2026

Conduction-Cooled Operation of an SRF Multi-Cell Cavity

The development of compact, SRF-based accelerators for applications beyond research is experiencing notable advancements due to the use of cryocoolers for conduction-cooling instead of traditional liquid cryogens. Following the successful demonstration of a single-cell cavity operated through conduction cooling with three two-stage cryocoolers, Jefferson Lab (JLab) has made strides in the operation of a multi-cell resonator. This milestone paves the way for high-energy applications of compact, conduction-cooled SRF machines. The demonstration, carried out in collaboration with General Atomics, will take place in a dedicated horizontal test cryostat (HTC) at their San Diego facility. This presentation will highlight the technological developments, the latest results, and valuable lessons learned.

Vennekate, J. [Thomas Jefferson National Accelerat↗

DOE OSTI2025

Conduction-Cooled Operation of an SRF Multi-Cell Cavity

Vennekate, J. [Thomas Jefferson National Accelerat↗

DOE OSTI2020

Preload Characterization of Short Models of MQXF the Nb 3 Sn Low-β Quadrupole for the Hi-Lumi LHC

MQXF is the Nb3Sn Low-β Quadrupole magnet that the HL-LHC project is planning to install in the LHC interaction regions in 2026 as part of an upgrade to increase the LHC inte-grated luminosity by about a factor of ten. The magnet will be fab-ricated in two different lengths: 4.2 m for MQXFA, built in the US by the Accelerator Upgrade Project (AUP), and 7.15 m for MQXFB, fabricated by CERN. In order to qualify the magnet de-sign and characterize its performance with different conductors, cable geometries and pre-load configuration, five short model magnets, called MQXFS, were fabricated, assembled and tested. The latest model, MQXFS6, uses a new powder-in-tube (PIT) su-perconducting wire, featuring a bundle barrier surrounding the filaments. The coil and the support structure were equipped with strain gauges and optical fibres to monitor strain during assembly, cool-down and excitation. In this paper we further develop the conventional azimuthal preload analysis and introduce a new set of tools for MQXF coil pack characterization which we use to an-alyse the behaviour of MQXFS6 room temperature preload and to reanalyse all the short models tested at CERN. A comparison is made between all the studied magnets revealing new characteriz-ing preload parameters.

43 PARTICLE ACCELERATORS↗

DOE OSTI2022

Multiphysics Simulation of the Thermal Response of a Nanofibrous Target in a High-Intensity Beam

Nanofibrous structures are of high interest to the fields of engineering and materials science, and investigation of their properties as well as discovery of novel applications for them both constitute lively areas of research. A very promising application of nanofiber mats lies in the field of accelerator technology: beam targets made from nanofiber mats offer a solution to the problem of advancing the "intensity frontier"–-the limit on the beam intensities that can be realized in fixed target experiments and neutrino production facilities. However, testing has shown that the survivability of these nanofiber targets depends strongly on their manufacturing parameters, such as the packing density of fibers. In this work, we will use multiphysics simulations to perform a thermal study on how nanofiber targets react to high intensity beams, so that the dependency of the targets’ lifetime on their construction parameters can be better understood.

43 PARTICLE ACCELERATORS↗

DOE OSTI2023

Commissioning, Performance, and Effect of the Quench Current-Boosting Device on a Dedicated Superconducting Magnet

Superconducting magnet training is one of the accelerator related issues attracting attention due to significant operational costs and time budget associated to it. It is especially worrisome that magnets based on the “next-generation” Nb 3 Sn technology are affected by long training. While various efforts are underway to better understand and resolve the problem a parallel path could also be investigated, a path bypassing the issue. Following the concept of fast induced over-current during magnet powering, FNAL has developed an upgradable capacitor-based device to discharge through a superconducting magnet at quench detection or operator chosen time. The 0.4 F/1 kV device has been tested on a 1-m-long dipole-coil in a “mirror” magnet configuration and conclusive results on magnet training elimination have been observed. Here in this paper we discuss the main characteristics of the device, compare simulated response and actual performance, elaborate on test drivers and outcomes. Next steps and perspectives for future use are debated.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2023

A sensitivity analysis to predict the neutronics behavior of samples irradiated in the VTR rabbit system

We report a low-order neutronics model is developed to carry out hundreds of simulations efficiently and investigate the neutronics behavior of samples being irradiated in a test reactor setting under different geometrical constraints. The low-order model allowed for simulations that yield the expected neutronics behavior of any irradiated sample in any environment and allows for the calculation of highly accurate spatially averaged statistics and idealized spatial distributions in the neutron flux. Several benchmarks are performed to evaluate the performance and limitations of the low-order model revealing many important findings. The low-order model predicted the LHGR in the EBR-II driver fuel to within 2.34% by only simulating the fuel rod by itself, which served as a validation for the model. Sensitivity studies investigated 3% enriched UO 2 and U-10Zr being irradiated in the Versatile Test Reactor rabbit system. The analyses investigated a range of combinations of 15 radii and 5 heights for each sample in the rabbit system. Similar data sets are also provided for irradiations in the Advanced Test Reactor’s B-10 irradiation position, which is a thermal neutron spectrum environment. Generalized fits and fit coefficients are obtained for sample heating, reaction rate densities, and local multiplication rate characteristics, allowing the predictions of the neutronics behavior of the samples based on their geometrical constraints. The analyses and fits laid the groundwork for developing a user-end Multiphysics analysis framework to assist and accelerate irradiation experiment design and optimization.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

DOE OSTI2024

Field-Emission Properties of Vertically Aligned Carbon Nanotube Cathodes of Varying Geometries

This work characterizes the bulk emission properties of carbon nanotube (CNT) forest cathodes fabricated with various geometries. Geometries explored include dense nanotube forests of varying height grown on 5×5 mm silicon (Si) substrates and discrete, patterned CNT pillars fabricated using UV photolithography. Dense forests heights ranged from 526 μ m to 1.41 mm, with packing fraction for dense forest calculated to be 4e10 nanotubes/cm2 based on an average nanotube separation distance of 100 nm for fixed growth dense forests. Patterned sample micro pillar heights ranged from 47 to 393 μ m with pillar widths on tested samples ranging from 250 to 270 μ m . Properties explored include emission current, turn-on field, and emission current performance over time. A parallel plate electron beam diode with a 100- μ m A-K gap and an automated test apparatus were developed to provide a configurable experiment that provides accurate and repeatable measurements for dc, dc sweep, and timed performance testing. Operating voltages for the voltage sweeps spanned from 0 to −350 V. Furthermore, testing has shown evidence of a hysteresis effect on the emission current tied to the applied field history as well as shifting of the turn-on field magnitude throughout the testing period, suggesting a conditioning effect during use. Three separate emission regions in the I–V curves during sweep testing have also been observed. In the geometric study, dense forests and patterned samples were sweep tested up to a peak applied voltage of −250 V, with the taller samples generally performing better. Currents produced in the geometric study from the dense forest emitters ranged from 36.8 to 572.34 μ A , with current densities ranging from 15 to 2.29 mA/cm2. Currents produced from the patterned micropillar emitters ranged from 39.4 to 317.51 μ A , with current densities ranging from 67 to 3 mA/cm2. DC time testing s...

36 MATERIALS SCIENCE↗

DOE OSTI2022

Second Target Station Project (STS) Steerable Optic Design & Testing Report

Multiple neutron scattering instrument concepts for the Spallation Neutron Source's Second Target Station (STS) incorporate advanced neutron optic designs which incorporate discrete mirrors rather than continuous neutron guides that were the standard for instruments in the First Target Station. These mirrors can be a few to several meters in length and must be stably supported and aligned as a single optic. In addition, due to the length of the STS instruments and the small size of the STS neutron beams, installation and alignment at the micron level of precision will be required, which is beyond the ability of today's survey & alignment technology. Thus, a means of remotely adjusting these mirrors with single digit micron resolution is needed. A Steerable Optic System was designed to provide the precision and resolution required to support and manipulate these large, heavy optics under beamline shielding. A mockup was developed to demonstrate and validate this system for use in neutron optic applications, and this document describes the design and testing results of that mockup.

43 PARTICLE ACCELERATORS↗

DOE OSTI2025

Study and improvement of the trigger system in ICARUS

In recent years, intriguing experimental neutrino anomalies have emerged. If confirmed, they could hint at the presence of additional sterile neutrino states playing in neutrino mixing. The Short-Baseline Neutrino project at Fermilab aims to delve into these anomalies, utilizing three Liquid Argon Time Projection Chamber detectors along the Booster Neutrino Beam. The SBND detector serves as nearby instruments, while MicroBooNE and ICARUS function as far detectors and also explore the NuMI beam off-axis. A relevant aspect in the functioning of all SBN detectors is the trigger system, that determines which interactions are recorded. In particular, in ICARUS, it relies on the synchronization of prompt signals from scintillation light within the LAr-TPC, detected by a system of Photo-Multiplier Tubes, with the proton beam’s spill extraction. The existing majority-based logic of the trigger system could potentially be enhanced through adder boards that sum analog signals from PMTs in groups of 15. This sum-based triggering might aid in identifying events near TPC walls, where light is abundant but captured by only a few PMTs, potentially bypassing the majority condition. Comprehensive tests have been performed to characterize these adder boards.

43 PARTICLE ACCELERATORS↗

DOE OSTI2025

A Solid Polarized Target Development Facility at Jefferson Lab

Solid polarized targets are a crucial tool used in scattering experiments to investigate different properties of the nucleon. The equipment used to produce, measure, and maintain conditions for the polarized material is complex in comparison to nonpolarized targets. This, in combination with the frequency of polarized experiments run at Jefferson Lab, limits the opportunity to refine and build upon experience gained from previously constructed targets. To address this, the Jefferson Lab Target Group has begun the construction of a permanent facility dedicated to creating and testing material for Dynamic Nuclear Polarization. The design elements and manufacture of the test cryostat along with the incorporation of other DNP associated equipment will be presented.

Brock, James [Thomas Jefferson National Accelerato↗

DOE OSTI2022

Fabrication experience of the pre-production PIP-II SSR2 cavities at Fermilab

The Proton Improvement Plan-II (PIP-II, [1]) linac will include 35 Single Spoke Resonators type 2 (SSR2). A total of eight pre-production SSR2 jacketed cavities will be procured and five installed in the first pre-production cryomodule. The mechanical design of the jacketed cavity has been finalized and it will be presented in this paper along with fabrication and processing experience. The importance of interfaces, quality controls and procurement aspects in the design phase will be remarked as well as lessons learned during the fabrication process. Furthermore, development studies will be presented together with other design validation tests.

43 PARTICLE ACCELERATORS↗

DOE OSTI2023

Long-term ultrasonic monitoring of concrete affected by alkali-silica reaction

This article presents continuous monitoring results of alkali-silica reaction (ASR) development in concrete specimens for over 400 days using ultrasonic testing and expansion measurements. Eight concrete specimens with nonreactive aggregate (Control), reactive coarse aggregate, and reactive fine aggregates were cast with two reinforced confinement conditions. The specimens were conditioned in an environmental chamber with high temperature and humidity (38°C and 90% relative humidity) to accelerate the ASR development. A multichannel ultrasonic monitoring system was developed to collect ultrasonic signals automatically, and the expansions in three directions were measured periodically. Results showed that the relative velocity change could detect the ASR initiation in all reactive specimens and show a correlation with expansion in the early stage. However, these correlations are inconsistent for different ASR specimens, and the velocity change becomes less sensitive to ASR damage in the late stage (after 300 days). Irrecoverable velocity drop was observed during every chamber shutdown period, especially in specimens with higher levels of ASR damage. This phenomenon suggests that the nonlinear ultrasonic response caused by the ambient temperature variation may indicate the ASR damage.

Engineering↗

DOE OSTI2023

Long-term durability test of highly efficient membrane electrode assemblies for anion exchange membrane seawater electrolyzers

Direct seawater electrolysis faces fundamental electrochemical challenges, such as suppression of chlorine adsorption and/or evolution reactions that poison the current state-of-the-art anode catalysts and accelerate the degradation of the anion exchange membrane (AEM). The technically favored solution path for addressing these issues includes development of novel selective catalysts and implementation of limited operating conditions. Therefore, development of highly active, selective, cost-effective, and stable seawater-splitting catalysts is required for a successful commercialization of the AEM water electrolyzers (AEMWEs). In this work, we report for the first-time an extended operation for over 1000 h of advanced AEMWEs, operating directly with seawater. To fabricate the membrane electrode assemblies (MEAs), catalyst coated electrodes (CCEs) are assembled with Sustainion® X37-50 grade T anion exchange membranes. The anode CCEs are fabricated by spraying an ink prepared from nanostructured NiFe-layered double hydroxide (LDH) catalyst that are synthesized by the solvothermal method and deposited directly onto platinized titanium porous transport layers (PTLs). The cathode CCEs are prepared by spraying an ink prepared from commercial Renay-Nickel catalyst onto a nickel fiber felt. As prepared AEM electrolyzer cells operated with seawater and demonstrated better than previously reported in the literature performance of over 1000 h of operation at a constant current density of 300 mA cm –2 .

25 ENERGY STORAGE↗

DOE OSTI2024

Turbulently Driven Detonation Initiation in Electron-degenerate Matter with Helium

Abstract Type Ia supernovae (SNe Ia) are standardizable cosmological candles that led to the discovery of the accelerating Universe. However, the physics of how white dwarfs (WDs) explode and lead to SNe Ia is still poorly understood. The initiation of the detonation front that rapidly disrupts the WD is a crucial element of the puzzle, and global 3D simulations of SNe Ia cannot resolve the requisite length scales to capture detonation initiation. In this work, we elucidate a theoretical criterion for detonation initiation in the distributed burning regime. We test this criterion against local 3D driven turbulent hydrodynamical simulations within electron-degenerate WD matter consisting initially of pure helium. We demonstrate a novel pathway for detonation, in which strong turbulent dissipation rapidly heats the helium, and forms carbon nuclei sufficient to lead to a detonation through accelerated burning via α captures. Simulations of strongly driven turbulent conditions lead to detonations at a mean density of 10 6 g cm −3 and mean temperature of 1.4–1.8 × 10 9 K, but fail to detonate at a lower density of 10 5 g cm −3 , in excellent agreement with theoretical predictions.

Astronomy & Astrophysics↗