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All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

Impact of systematic redshift errors on the cross-correlation of the Lyman-α forest with quasars at small scales using DESI Early Data

The Dark Energy Spectroscopic Instrument (DESI) will measure millions of quasar spectra by the end of its 5 year survey. Quasar redshift errors impact the shape of the Lyman-α forest correlation functions, which can affect cosmological analyses and therefore cosmological interpretations. Here, using data from the DESI Early Data Release and the first two months of the main survey, we measure the systematic redshift error from an offset in the cross-correlation of the Lyman-α forest with quasars. We find evidence for a redshift dependent bias causing redshifts to be underestimated with increasing redshift, stemming from improper modeling of the Lyman-α optical depth in the templates used for redshift estimation. New templates were derived for the DESI Year 1 quasar sample at z > 1.6 and we found the redshift dependent bias, Δr ∥ , increased from -1.94 ± 0.15 h -1 Mpc to -0.08 ± 0.04 h -1 Mpc (-205 ± 15 km s -1 to -9.0 ± 4.0 km s -1 ). These new templates will be used to provide redshifts for the DESI Year 1 quasar sample.

Lyman alpha forest↗
DOE OSTI2019

Ground-State and Thermodynamical Properties of Uranium Mononitride from Anharmonic First-Principles Theory

We report on an advanced density-functional theory (DFT) approach for investigating the ground-state and thermodynamical properties of uranium mononitride (UN). The electronic structure for UN at zero temperature is obtained from DFT that utilizes the generalized gradient approximation (GGA) for the electron exchange and correlation functional and includes spin-orbit interaction and an extension with orbital polarization. Thermodynamical properties are computed within the quasi-harmonic approximation in the Debye–Grüneisen model while anharmonicity is captured in the self-consistent ab initio lattice dynamics (SCAILD) scheme. Anharmonic phonons have heretofore never been modeled from first-principles for UN but they turn out to be important. The computed free energy compares well with that of a CALPHAD (CALculation of PHAse Diagrams) assessment of available experimental data.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
NASA NTRS1982

Application of strong fluctuation random medium theory to scattering of electromagnetic waves from a half-space of dielectric mixture

The strong fluctuation random medium theory is applied to calculate scattering from a half-space of dielectric mixture. The first and second moments of the fields are calculated, respectively, by using the bilocal and the distorted Born approximations, and the low frequency limit is taken. The singularity of the dyadic Green's function is taken into account. Expressions for the effective permittivity for the full space case are derived. It is shown that the derived result of the effect permittivity is identical to that of the Polder and van Santern mixing formula. The correlation function of the random medium is obtained by using simple physical arguments and is expressed in terms of the fractional volumes and particle sizes of the constituents of the mixture. Backscattering coefficients of a half-space dielectric mixture are also calculated. Numerical results of the effective permittivity and backscattering coefficients are illustrated using typical parameters encountered in microwave remote sensing of dry and wet snow. It is also shown that experimental data can be matched with the theory by using physical parameters of the medium as obtained from ground truth measurements.

Tsang, L.↗
NASA NTRS1985

Analysis/forecast experiments with a multivariate statistical analysis scheme using FGGE data

A three-dimensional, multivariate, statistical analysis method, optimal interpolation (OI) is described for modeling meteorological data from widely dispersed sites. The model was developed to analyze FGGE data at the NASA-Goddard Laboratory of Atmospherics. The model features a multivariate surface analysis over the oceans, including maintenance of the Ekman balance and a geographically dependent correlation function. Preliminary comparisons are made between the OI model and similar schemes employed at the European Center for Medium Range Weather Forecasts and the National Meteorological Center. The OI scheme is used to provide input to a GCM, and model error correlations are calculated for forecasts of 500 mb vertical water mixing ratios and the wind profiles. Comparisons are made between the predictions and measured data. The model is shown to be as accurate as a successive corrections model out to 4.5 days.

Baker, W. E.↗
DOE OSTI2014

The ground state and electronic structure of Gd@C{sub 82}: A systematic theoretical investigation of first principle density functionals

As a representative lanthanide endohedral metallofullerene, Gd@C{sub 82} has attracted a widespread attention among theorists and experimentalists ever since its first synthesis. Through comprehensive comparisons and discussions, as well as references to the latest high precision experiments, we evaluated the performance of different computational methods. Our results showed that the appropriate choice of the exchange-correlation functionals is the decisive factor to accurately predict both geometric and electronic structures for Gd@C{sub 82}. The electronic structure of the ground state and energy gap between the septet ground state and the nonet low-lying state obtained from pure density functional methods, such as PBE and PW91, are in good agreement with current experiment. Unlike pure functionals, the popularly used hybrid functionals in previous studies, such as B3LYP, could infer the qualitative correct ground state only when small basis set for C atoms is employed. Furthermore, we also highlighted that other geometric structures of Gd@C{sub 82} with the Gd staying at different positions are either not stable or with higher energies. This work should provide some useful references for various theoretical methodologies in further density functional studies on Gd@C{sub 82} and its derivatives in the future.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2021

Importance of Van der Waals Interactions in Hydrogen Adsorption on a Silicon-carbide Nanotube Revisited with vdW-DFT and Quantum Monte Carlo

Density functional theory (DFT) is a valuable tool for calculating adsorption energies toward designing materials for hydrogen storage. However, dispersion forces being absent from the local/semi-local theory, it remains unclear as to how the consideration of van der Waals (vdW) interactions affects such calculations. For the first time, we applied diffusion Monte Carlo (DMC) to evaluate the adsorption characteristics of a hydrogen molecule on a (5,5) armchair silicon-carbide nanotube (H 2 -SiCNT). Within the DFT framework, we benchmarked various exchange-correlation functionals, including those recently developed for treating dispersion or vdW interactions. We found that the vdW-corrected DFT methods agree well with DMC, whereas the local (semilocal) functional significantly over (under)-binds. Furthermore, we fully optimized the H 2 -SiCNT geometry within the DFT framework and investigated the correlation between the structure and charge density. The vdW contribution to the adsorption was found to be non-negligible at similar to 1 kcal/mol per hydrogen molecule, which amounts to 9-29% of the ideal adsorption energy required for hydrogen storage applications.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2024

Multiplicity and event-scale dependent flow and jet fragmentation in pp collisions at $\sqrt{s}$ = 13 TeV and in p–Pb collisions at $\sqrt{s_{\textrm{NN}}}$ = 5.02 TeV

Long- and short-range correlations for pairs of charged particles are studied via two-particle angular correlations in pp collisions at $\sqrt{s}$ = 13 TeV and p–Pb collisions at $\sqrt{s_{\textrm{NN}}}$ = 5.02 TeV. The correlation functions are measured as a function of relative azimuthal angle Δφ and pseudorapidity separation Δη for pairs of primary charged particles within the pseudorapidity interval |η| < 0.9 and the transverse-momentum interval 1 < p T < 4 GeV/c. Flow coefficients are extracted for the long-range correlations (1.6 < |Δη| < 1.8) in various high-multiplicity event classes using the low-multiplicity template ft method. The method is used to subtract the enhanced yield of away-side jet fragments in high-multiplicity events. These results show decreasing flow signals toward lower multiplicity events. Furthermore, the flow coefficients for events with hard probes, such as jets or leading particles, do not exhibit any significant changes compared to those obtained from high-multiplicity events without any specific event selection criteria. The results are compared with hydrodynamic-model calculations, and it is found that a better understanding of the initial conditions is necessary to describe the results, particularly for low-multiplicity events.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2020

Improved Predictive Tools for Structural Properties of Metal–Organic Frameworks

The accurate determination of structural parameters is necessary to understand the electronic and magnetic properties of metal–organic frameworks (MOFs) and is a first step toward accurate calculations of electronic structure and function for separations and catalysis. Theoretical structural determination of metal-organic frameworks is particularly challenging because they involve ionic, covalent, and noncovalent interactions, which must be treated in a balanced fashion. Here, we apply a diverse group of local exchange-correlation functionals (PBE, PBEsol, PBE-D2, PBE-D3, vdW-DF2, SOGGA, MN15-L, revM06-L, SCAN, and revTPSS) to a broad test set of MOFs to seek the most accurate functionals to study various structural aspects of porous solids, in particular to study lattice constants, unit cell volume, two types of pore size characteristics, bond lengths, bond angles, and torsional angles). The recently developed meta functionals revM06-L and SCAN, without adding any molecular mechanics terms, are able to predict more accurate structures than previously recommended functionals, both those without molecular mechanics terms (PBE, PBEsol, vdW-DF2, and revTPSS) and those with them (PBE-D2 and PBE-D3). To provide a broader test, these two functionals are also tested for lattice constants and band gaps of unary, binary, and ternary semiconductors.

36 MATERIALS SCIENCE↗
NASA NTRS1991

Fuzzy correlations of gamma-ray bursts

The origin of gamma-ray bursts is not known, both in the sense of the nature of the source emitting the radiation and literally, the position of the burst on the sky. Lacking unambiguously identified counterparts in any wavelength band studied to date, statistical approaches are required to determine the burster distance scale. Angular correlation analysis is one of the most powerful tools in this regard. However, poor detector resolution gives large localization errors, effectively beam smearing the positions. The resulting fuzzy angular correlation function is investigated and the generic isotropization that smearing induces on any intrinsic clustering is discussed. In particular, the extent to which gamma-ray burst observations by the BATSE detector aboard the Gamma-Ray Observatory might recover an intrinsic source correlation is investigated.

Hartmann, Dieter H.↗
NASA NTRS2001

Cross-Correlation Analysis of UV Profile Variations and Nonradial Pulsations in Be Stars

This study is an investigation of the role of photospheric nonradial pulsations in the mass loss processes of Be stars. Some 18 Be stars were the focus of intensive, multi-wavelength campaigns between 1985 and 1996 with the NASA/ESA International Ultraviolet Explorer Satellite (IUE) . The campaigns were designed to monitor variations in the UV flux and stellar wind lines with near simultaneous, high signal-to-noise, optical spectroscopy of photospheric lines. The high quality, ground-based spectra were required to record the subtle, blue-to-red moving bump patterns in spectral line profiles that result from nonradial pulsations. We found that the same fine variations in the UV photospheric lines can be extracted from noisy IUE spectra by cross-correlating each target spectrum with a narrow-lined standard spectrum. Time series analyses of the cross-correlation functions then reveal the periodic signals, amplitudes, phases, and modal identifications of the pulsations. Our goals are to compare such results from UV and optical time series in order to model the stellar photospheric temperature and velocity fluctuations, and to search for correlated UV wind line variations to determine whether there is a connection between pulsation and mass loss.

Gies, Douglas R.↗
DOE OSTI2017

Phase Equilibria and Condensed Phase Properties of Fluorinated Alkanes via First Principles Simulations

Vapor liquid equilibria (VLE) of organic compounds is governed by weak non-covalent interactions. This presents a significant challenge in predicting VLE using a first principles approach where density functional theory is used to model system potential. However, a dispersion corrected approach has significantly improved the performance of traditional density functionals. Here, we predict the VLE for a nonpolar carbon tetrafluoride (R14) and polar 1,1,1,2-tetrafluoroethane (R134a)via first principles Gibbs ensemble Monte Carlo simulations using PBED3 density functional. We find that the saturated liquid density for R14 is slightly under predicted for subcritical temperatures, while for R134a it is under predicted at lower reduced temperatures and over predicted at higher reduced temperatures. In the liquid phase, angle-resolved pair correlation functions indicate slight preference for R143a to align in parallel and antiparallel orientation in the first solvation shell.The vibrational spectra reveal peak broadening in the condensed phase due to solvothermal effects. Altogether, we find thePBED3 functional performance is better for the nonpolar molecule as compared to the polar one.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2016

Supersymmetric Renyi entropy in CFT 2 and AdS 3

We show that in any two dimensional conformal field theory with (2, 2) super-symmetry one can define a supersymmetric analog of the usual Renyi entropy of a spatial region A. It differs from the Renyi entropy by a universal function (which we compute) of the central charge, Renyi parameter n and the geometric parameters of A. In the limit n → 1 it coincides with the entanglement entropy. Thus, it contains the same information as the Renyi entropy but its computation only involves correlation functions of chiral and anti-chiral operators. We also show that this quantity appears naturally in string theory on AdS3.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2023

AdS 3 orbifolds, BTZ black holes, and holography

Conical defects of the form (AdS 3 × S 3 )/Z k have an exact orbifold description in worldsheet string theory, which we derive from their known presentation as gauged Wess-Zumino-Witten models. The configuration of strings and fivebranes sourcing this geometry is well-understood, as is the correspondence to states/operators in the dual CFT 2 . One can analytically continue the construction to Euclidean AdS 3 (i.e. the hyperbolic ball $H$$^{+}_{3}$) and consider the orbifold by any infinite discrete (Kleinian) group generated by a set of elliptic elements γi ϵ SL(2, C), $γ$$^{ki}_{i}$ = 1, i = 1, . . . , K. The resulting geometry consists of multiple conical defects traveling along geodesics in $H$$^{+}_{3}$, and provides a semiclassical bulk description of correlation functions in the dual CFT involving the corresponding defect operators, which is nonperturbatively exact in α'. The Lorentzian continuation of these geometries describes a collection of defects colliding to make a BTZ black hole. We comment on a recent proposal to use such correlators to prepare a basis of black hole microstates, and elaborate on a picture of black hole formation and evaporation in terms of the underlying brane dynamics in the bulk.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2023

Structural basis of impaired disaggregase function in the oxidation-sensitive SKD3 mutant causing 3-methylglutaconic aciduria

Abstract Mitochondria are critical to cellular and organismal health. To prevent damage, mitochondria have evolved protein quality control machines to survey and maintain the mitochondrial proteome. SKD3, also known as CLPB, is a ring-forming, ATP-fueled protein disaggregase essential for preserving mitochondrial integrity and structure. SKD3 deficiency causes 3-methylglutaconic aciduria type VII (MGCA7) and early death in infants, while mutations in the ATPase domain impair protein disaggregation with the observed loss-of-function correlating with disease severity. How mutations in the non-catalytic N-domain cause disease is unknown. Here, we show that the disease-associated N-domain mutation, Y272C, forms an intramolecular disulfide bond with Cys267 and severely impairs SKD3 Y272C function under oxidizing conditions and in living cells. While Cys267 and Tyr272 are found in all SKD3 isoforms, isoform-1 features an additional α-helix that may compete with substrate-binding as suggested by crystal structure analyses and in silico modeling, underscoring the importance of the N-domain to SKD3 function.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2018

Efficient reactive Brownian dynamics

We develop a Split Reactive Brownian Dynamics (SRBD) algorithm for particle simulations of reaction-diffusion systems based on the Doi or volume reactivity model, in which pairs of particles react with a specified Poisson rate if they are closer than a chosen reactive distance. In our Doi model, we ensure that the microscopic reaction rules for various association and dissociation reactions are consistent with detailed balance (time reversibility) at thermodynamic equilibrium. The SRBD algorithm uses Strang splitting in time to separate reaction and diffusion and solves both the diffusion-only and reaction-only subproblems exactly, even at high packing densities. To efficiently process reactions without uncontrolled approximations, SRBD employs an event-driven algorithm that processes reactions in a time-ordered sequence over the duration of the time step. A grid of cells with size larger than all of the reactive distances is used to schedule and process the reactions, but unlike traditional grid-based methods such as reaction-diffusion master equation algorithms, the results of SRBD are statistically independent of the size of the grid used to accelerate the processing of reactions. We use the SRBD algorithm to compute the effective macroscopic reaction rate for both reaction-limited and diffusion-limited irreversible association in three dimensions and compare to existing theoretical predictions at low and moderate densities. We also study long-time tails in the time correlation functions for reversible association at thermodynamic equilibrium and compare to recent theoretical predictions. Finally, we compare different particle and continuum methods on a model exhibiting a Turing-like instability and pattern formation. Our studies reinforce the common finding that microscopic mechanisms and correlations matter for diffusion-limited systems, making continuum and even mesoscopic modeling of such systems difficult or impossible. We also find that for models in which particles diffuse off lattice, such as the Doi model, reactions lead to a spurious enhancement of the effective diffusion coefficients.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2022

Shape-induced superstructure formation in concentrated ferrofluids under applied magnetic fields

The field-induced ordering of concentrated ferrofluids based on spherical and cuboidal maghemite nanoparticles is studied using small-angle neutron scattering, revealing a qualitative effect of the faceted shape on the interparticle interactions as shown in the structure factor and correlation lengths. Whereas a spatially disordered hard-sphere interaction potential with a short correlation length is found for ~9 nm spherical nanoparticles, nanocubes of a comparable particle size exhibit a more pronounced interparticle interaction and the formation of linear arrangements. Analysis of the anisotropic two-dimensional pair distance correlation function gives insight into the real-space arrangement of the nanoparticles. On the basis of the short interparticle distances found here, oriented attachment, i.e. a face-to-face arrangement of the nanocubes, is likely. The unusual field dependence of the interparticle correlations suggests a field-induced structural rearrangement.

36 MATERIALS SCIENCE↗
DOE OSTI2025

Optimal intrinsic alignment estimators in the presence of redshift-space distortions

We present estimators for quantifying intrinsic alignments in large spectroscopic surveys that efficiently capture line-of-sight (LOS) information while being relatively insensitive to redshift-space distortions (RSD). We demonstrate that changing the LOS integration range, pimax, as a function of transverse separation outperforms the conventional choice of a single pimax value. This is further improved by replacing the flat pimax cut with a LOS weighting based on shape projection and RSD. Although these estimators incorporate additional LOS information, they are projected correlations that exhibit signal-to-noise ratios comparable to 3D correlation functions, such as the IA quadrupole. Using simulations from Abacus Summit, we evaluate these estimators and provide recommended pimax values and weights for projected separations of 1 - 100 Mpc/h. These will improve measurements of intrinsic alignments in large cosmological surveys and the constraints they provide for both weak lensing and direct cosmological applications.

cosmology↗
NASA NTRS2001

Design and Implementation of a Parallel Multivariate Ensemble Kalman Filter for the Poseidon Ocean General Circulation Model

A multivariate ensemble Kalman filter (MvEnKF) implemented on a massively parallel computer architecture has been implemented for the Poseidon ocean circulation model and tested with a Pacific Basin model configuration. There are about two million prognostic state-vector variables. Parallelism for the data assimilation step is achieved by regionalization of the background-error covariances that are calculated from the phase-space distribution of the ensemble. Each processing element (PE) collects elements of a matrix measurement functional from nearby PEs. To avoid the introduction of spurious long-range covariances associated with finite ensemble sizes, the background-error covariances are given compact support by means of a Hadamard (element by element) product with a three-dimensional canonical correlation function. The methodology and the MvEnKF configuration are discussed. It is shown that the regionalization of the background covariances; has a negligible impact on the quality of the analyses. The parallel algorithm is very efficient for large numbers of observations but does not scale well beyond 100 PEs at the current model resolution. On a platform with distributed memory, memory rather than speed is the limiting factor.

Keppenne, Christian L.↗