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At least 1,459 records · Page 81

Integrated Steady-State System Package for Nuclear Thermal Propulsion Analysis Using Multi-Dimensional Thermal Hydraulics and Dimensionless Turbopump Treatment

Nuclear thermal propulsion is an evolving technology that can be utilized for long-distance space travel. This technology yields the advantage of a high thrust and specific impulse, but requires an examination of the potential design adjustments necessary to enhance its feasibility. The development of nuclear thermal propulsion requires a comprehensive understanding of the system-level behavior during transient and steady-state operation. This paper extends our previous research by including the proper handling of turbomachinery with multi-channel thermal hydraulic simulations only for steady-state solutions. The system-level approach presented here enables the treatment of the turbopump components through non-dimensional analysis that eliminates the assumption of constant efficiencies. All the other components within the system (e.g., reflector and core) can be discretized to multiple channels and layers, in which the full thermal hydraulic solution is established. The approach chosen here enables the realistic modeling of the propellant flow within the expander cycle by capturing the pressure losses, mass flow rate splits, and enthalpy gain for various operational conditions. The verification of the package is completed through point comparisons of previous investigations into similar system designs. Furthermore, sensitivity studies are used to benchmark the capabilities of the package and investigate solution variations due to the perturbation of operational conditions and regimes. The sensitivity studies performed here are important to capture variation in flow characteristics (e.g., temperature, pressure, mass flow rates) for different design objectives such as the thrust and specific impulse. This work demonstrates that system-level simulations lacking multi-channel capability and proper turbomachinery treatment may yield higher uncertainties in understanding the engine’s response and characteristics to changing various requirements. This is extremely important when screening the design space of such propulsion systems and when transient simulations are required.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Modeling Impacts of Resilience Architectures for Extreme-Scale Storage Systems

The Scientific Modeling and Simulation of Storage project focused on improving our ability to store information reliably. The project, done jointly at the University of Wisconsin-Madison, Los Alamos National Laboratories, and Sandia National Laboratories, had the main goal of transforming the art of reliable storage system construction into a more precise science. Along those lines, the project developed numerous tools to expose problems in existing systems; these tools, when applied to the state of the art, uncovered numerous flaws in existing approaches, showing that they both are error prone and in some cases contain serious design flaws. The project also led to the creation of new approaches in reliable system construction. One such approach shows how a storage system can adapt its behavior on the fly to deliver higher performance when there are few underlying failures, but then act more conservatively when more failures are occurring to ensure the safe storage of user data. Another approach develops a storage system consistency model which both delivers high performance but high levels of reliability, a significant advance over previous approaches. Overall, the tools developed within the project advanced the science of reliable storage design, and the new approaches that resulted advanced the science of storage system construction.

97 MATHEMATICS AND COMPUTING↗

Combining Reactive Quantum-Mechanical Molecular-Dynamics Simulations with Mutagenesis, Crystallography, and Enzyme Kinetics to Reveal Plausible Steps of Isocyanide Hydratase Catalysis

A complete understanding of enzyme mechanisms requires atomistic details of chemical reactions. Quantum-based molecular dynamics simulations (QMD) are a potential source of this information, but trade-offs between accuracy and computational cost have limited their use. We previously developed extended Lagrangian Born–Oppenheimer molecular dynamics (XL-BOMD) methods that leverage a negligible compromise in accuracy to substantially decrease the cost of QMD simulations. Here, we develop a reactive QMD approach using the latest XL-BOMD formulation, which enables efficient simulations of highly reactive systems, and use it to investigate mechanisms of intermediate formation in isocyanide hydratase (ICH) catalysis. In QMD simulations, molecular analogs of ICH active site residues reacted with para-nitrophenyl isocyanide, forming a thioimidate. Analysis of simulated atomic configurational and charge dynamics revealed a pathway where protonation of the isocyanide carbon occurs prior to thioimidate formation and suggested a possible role of Asp17 as a proton donor in the early phase of ICH catalysis. To test whether the pathway seen using the reactive QMD approach might be relevant to ICH catalysis, we performed X-ray crystallography and pre-steady-state enzyme kinetics studies of wild-type and D17N mutant ICH. Both the structure and kinetics are sensitive to the D17N mutation in a manner that is consistent with the order of the reaction steps seen in the simulations. Mobile protons play essential roles in many enzymes, yet they are difficult to observe experimentally, making the ordering of proton-dependent steps ambiguous in many enzyme mechanisms. The ability to directly simulate model reactions for the design of experiments that provide information about enzyme mechanisms involving mobile protons demonstrates the significance of our reactive QMD approach and motivates further biological applications.

36 MATERIALS SCIENCE↗

Lowering entry barriers to developing custom simulators of distributed applications and platforms with SimGrid

Researchers in parallel and distributed computing (PDC) often resort to simulation because experiments conducted using a simulator can be for arbitrary experimental scenarios, are less resource-, labor-, and time-consuming than their real-world counterparts, and are perfectly repeatable and observable. Many frameworks have been developed to ease the development of PDC simulators, and these frameworks provide different levels of accuracy, scalability, versatility, extensibility, and usability. Further, the SimGrid framework has been used by many PDC researchers to produce a wide range of simulators for over two decades. Its popularity is due to a large emphasis placed on accuracy, scalability, and versatility, and is in spite of shortcomings in terms of extensibility and usability. Although SimGrid provides sensible simulation models for the common case, it was difficult for users to extend these models to meet domain-specific needs. Furthermore, SimGrid only provided relatively low-level simulation abstractions, making the implementation of a simulator of a complex system a labor-intensive undertaking. In this work we describe developments in the last decade that have contributed to vastly improving extensibility and usability, thus lowering or removing entry barriers for users to develop custom SimGrid simulators.

97 MATHEMATICS AND COMPUTING↗

Mitigating the Sign Problem through Basis Rotations

Quantum Monte Carlo simulations of quantum many-body systems are plagued by the Fermion sign problem. The computational complexity of simulating Fermions scales exponentially in the projection time β and system size. The sign problem is basis dependent and an improved basis, for fixed errors, leads to exponentially quicker simulations. Herein, we show how to use sign-free quantum Monte Carlo simulations to optimize over the choice of basis on large two-dimensional systems. We numerically illustrate these techniques decreasing the “badness” of the sign problem by optimizing over single-particle basis rotations on one- and two-dimensional Hubbard systems. We find a generic rotation which improves the average sign of the Hubbard model for a wide range of U and densities for L×4 systems. In one example improvement, the average sign (and hence simulation cost at fixed accuracy) for the 16×4 Hubbard model at U/t=4 and n=0.75 increases by exp[8.64(6)β]. For typical projection times of β ≳ 100, this accelerates such simulation by many orders of magnitude.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

High Solids Performance Testing in a Scaled TSCR System

The Tank Side Cesium Removal (TSCR) project is a technology demonstration that will pretreat Hanford tank waste supernatant in support of the Direct Feed Low-Activity Waste (DFLAW) mission. The TSCR system employs two key separation technologies: dead-end filtration (DEF) and ion exchange (IX) using crystalline silicotitanate (CST) media. DEF will be used to remove undissolved solids from tank waste to protect the functionality of the IX columns and the IX system will remove Cs-137 from tank waste. The separation technologies (DEF and IX) used in TSCR are technically mature and have also been successfully deployed at the Savannah River site in a similar facility known as the Tank Closure Cesium Removal (TCCR) system. While testing with simulants and real waste has been successfully performed under conditions expected during the initial operation of TSCR, test data is absent for assessing off normal high solids loading that may be in the TSCR waste feed. Normal TSCR treatment operations are expected to handle wastes with solids content on the order of 200 ppm, and off normal solids loading could be much larger than the nominal level. The testing program described in this report was conducted to understand the consequence of operating the TSCR system at elevated solids loadings up to the high-solids limit of 15,000 ppm [i.e., 1.5-wt%] identified in the TSCR design basis. Although the system is not required to make throughput above the nominal solids loading, the testing was intended to provide important information related to potential off normal operations. At off normal levels near the high-solids limit, there are potential implications for TSCR performance in the areas of throughput, DEF pressure drop, filter backflush frequency, and IX column pressure drop. In addition, intrusion of solids into the IX column was postulated to impact the Cs-137 loading behavior by promoting channeling or flow maldistribution in the column; since the magnitude of the postulated effect was unknown, assessing it was also of interest. The testing was performed using representative waste simulants and a prototypic, integrated TSCR system designed and assembled specifically to conduct the high solids performance assessment. Overall, the scaled TSCR testing demonstrated that full-scale unit operations can succeed in fulfilling their processing objectives in the presence of solids up to 3,000 ppm, but there are potential performance challenges to filtration operations at solids loadings as low as ~500 ppm. The severity of the challenge is likely to be dependent on the type and size distribution of solids, of which the current testing only examined a single type and size distribution. To provide some flexibility for future full-scale operations, the results of the testing suggest two possible risk reduction strategies that can be implemented without any changes in TSCR design or configuration. One option would be to enact an administrative limit on the solids loading to protect TSCR from feeds that are likely to require a high DEF swap frequency. Another option is to permit operation of the DEFs at differential pressures greater than 2 psid before swapping filters. The selection of a higher differential pressure target is not anticipated to adversely impact DEF backflushing efficacy and would reduce both swap frequency and the amount of waste sent to AP-108.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Adjusting the Energy Profile for CH–O Interactions Leads to Improved Stability of RNA Stem-Loop Structures in MD Simulations

The role of ribonucleic acid (RNA) in biology continues to grow, but insight into important aspects of RNA behavior is lacking, such as dynamic structural ensembles in different environments, how flexibility is coupled to function, and how function might be modulated by small molecule binding. In the case of proteins, much progress in these areas has been made by complementing experiments with atomistic simulations, but RNA simulation methods and force fields are less mature. It remains challenging to generate stable RNA simulations, even for small systems where well-defined, thermostable structures have been established by experiments. Further many different aspects of RNA energetics have been adjusted in force fields, seeking improvements that are transferable across a variety of RNA structural motifs. In this work, the role of weak CH···O interactions is explored, which are ubiquitous in RNA structure but have received less attention in RNA force field development. By comparing data extracted from high-resolution RNA crystal structures to energy profiles from quantum mechanics and force field calculations, it is shown that CH···O interactions are overly repulsive in the widely used Amber RNA force fields. A simple, targeted adjustment of CH···O repulsion that leaves the remainder of the force field unchanged was developed. Then, the standard and modified force fields were tested using molecular dynamics (MD) simulations with explicit water and salt, amassing over 300 μs of data for multiple RNA systems containing important features such as the presence of loops, base stacking interactions as well as canonical and noncanonical base pairing. In this work and others, standard force fields lead to reproducible unfolding of the NMR-based structures. Including a targeted CH···O adjustment in an otherwise identical protocol dramatically improves the outcome, leading to stable simulations for all RNA systems tested.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Response of a quantum disordered spin system to a local periodic drive

We consider a one-dimensional spin chain system with quenched disorder and in the presence of a local periodic drive. We study the time evolution of the system in the Floquet basis and evaluate the fidelity susceptibility, which is a measure of how a given state changes under a small perturbation, of states to a weak periodic drive. In this work, we demonstrate that the statistical properties of the fidelity susceptibility over different disorder realizations can be used to identify two phases of the system: (1) the many-body localized phase, in which the susceptibility exhibits long tails while its average value decreases rapidly as disorder increases, and (2) the ergodic phase, in which the susceptibility distribution is narrow and its average value weakly depends on disorder. This distinction in the average value of the susceptibility between the two phases develops readily for systems with ten or more spins. Therefore, recently built networks of qubits subject to a local drive can simulate dynamics of a system in the many-body localization regime. We also show that the spin accumulation speed is correlated with the fidelity susceptibility and can also be used to distinguish the two phases.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Automated Realistic Testbed Synthesis for Power System Communication Networks based on Graph Metrics

Communication networks are integral to modern power grid operations and are becoming increasingly critical as grid dynamics speed up and as more controls become closed-loop in form. Focusing on the interdependence between the physical grid and the communication system, we identify several key characteristics and typical graph properties based on analysis of a real communication system for a power grid. Moreover, an automated process was provided for synthetic testbed in the NS-3 simulator for the power system test case, and its network characteristics have been further derived for power system monitoring and control applications

Graph Analysis, Synthetic Testbed, communication n↗

Nonlinear Virtual Inertia Control of WTGs for Enhancing Primary Frequency Response and Suppressing Drivetrain Torsional Oscillations

Virtual inertia controllers (VICs) for wind turbine generators (WTGs) have been recently developed to compensate the reduction of inertia in power systems. However, VICs can induce drivetrain torsional oscillations of WTGs. This paper addresses this issue and develops a novel nonlinear VIC based on objective holographic feedback theory and the definition of a completely controllable system of Brunovsky type. Simulation results under various scenarios demonstrate that the proposed technique outperforms existing VICs in terms of enhancement of system frequency nadir, suppression of WTG drivetrain torsional oscillations, fast and smooth recovery of WTG rotor speed to the original maximum power point (MPP) before the disturbance as well as preventing secondary frequency dip caused by traditional VIC. The proposed technique is also able to adaptively coordinate multiple WTGs to enhance the frequency support and the dynamic performance of each WTG.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Design Paradigm for Modular Multilevel Converter-Based Generator Rectifier Systems

Modular Multilevel Converters (MMC) are being widely considered for medium to high voltage DC applications. Designing such converters through multi-objective optimization is of interest because such an approach allows the trade-off between competing objectives (for example mass and loss) to be explicitly and quantitatively identified. In this work, an optimization based design paradigm for MMC based generator rectifier systems is proposed. Such development typically requires detailed component design and simulation models for the electric machine and converter which are computationally expensive. As an alternative, the proposed work utilizes an electric machine metamodel, inductor metamodel, and high-speed steady-state simulation model for the MMC to facilitate multi-objective optimization minimizing system metrics of interest while satisfying system constraints. A case study is undertaken to demonstrate the functionality of the proposed design paradigm.

42 ENGINEERING↗

Linear Discriminant Analysis-Based Machine Learning and All-Atom Molecular Dynamics Simulations for Probing Electro-Osmotic Transport in Cationic-Polyelectrolyte-Brush-Grafted Nanochannels

Deciphering the correct mechanisms governing certain phenomena in polyelectrolyte (PE) brush grafted systems, revealed through atomistic simulations, is an extremely challenging problem. In a recent study, our all-atom molecular dynamics (MD) simulations revealed a non-linearly large electroosmotic (EOS) flow (in the presence of an applied electric field) in nanochannels grafted with PMETAC [Poly(2-(methacryloyloxy)ethyl trimethylammonium chloride] brushes. Given the lack of any formal procedure that would have directed us to identify the correct factors responsible for such an occurrence, we needed to spend several months and devote significant analyses to unravel the involved mechanisms. In this paper, we propose a Linear Discriminant Analysis (LDA) based Machine Learning (ML) approach to address this gap. At first, we obtain data on certain basic features from the all-atom MD data. These basic features represent the number of atoms of certain species around one atom of another (or same) species. Here, we obtain such data on basic features for a reference case (case of an EOS flow in PMETAC-brush-grafted nanochannels with a smaller electric field) and a perturbed case (case of an EOS flow in PMETAC-brush-grafted nanochannels with a larger electric field) in bins in which the nanochannel half height has been divided into. These datasets are high-dimensional dataset, to which the LDA is applied. This leads to the projection of the data (between the reference and the perturbed states) in a highly separated form on a 1D line. From such LDA calculations, we are able to identify the relative importance of the different basic features in ensuring this separation of the data (between the reference and the perturbed states) on the 1D line. This relative importance of the different basic features is quantified as “importance scores” for the different features, which in turn tell us what to study and where to study. Such knowledge enables us to rapidly identify the key factors responsible for the non-linearly large EOS transport in PMETAC-brush-grafted nanochannels.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Data-driven equation-free dynamics applied to many-protein complexes: The microtubule tip relaxation

Microtubules (MTs) constitute the largest components of the eukaryotic cytoskeleton and play crucial roles in various cellular processes, including mitosis and intracellular transport. The property allowing MTs to cater to such diverse roles is attributed to dynamic instability, which is coupled to the hydrolysis of GTP (guanosine-5'-triphosphate) to GDP (guanosine-5'-diphosphate) within the β-tubulin monomers. Understanding the equilibrium dynamics and the structural features of both GDP- and GTP-complexed MT tips, especially at an all-atom level, remains challenging for both experimental and computational methods because of their dynamic nature and the prohibitive computational demands of simulating large, many-protein systems. This study employs the “equation-free” multiscale computational method to accelerate the relaxation of all-atom simulations of MT tips toward their putative equilibrium conformation. Using large MT lattice systems (14 protofilaments × 8 heterodimers) comprising ~21-38 million atoms, we applied this multiscale approach to leapfrog through time and nearly double the computational efficiency in realizing relaxed all-atom conformations of GDP- and GTP-complexed MT tips. Commencing from an initial 4 μs unbiased all-atom simulation, we interleave coarse projective “equation-free” jumps with short bursts of all-atom molecular dynamics simulation to realize an additional effective simulation time of 1.875 μs. Our 5.875 μs of effective simulation trajectories for each system expose the subtle yet essential differences in the structures of MT tips as a function of whether β-tubulin monomer is complexed with GDP or GTP, as well as the lateral interactions within the MT tip, offering a refined understanding of features underlying MT dynamic instability. Furthermore, the approach presents a robust and generalizable framework for future explorations of large biomolecular systems at atomic resolution.

Wu, Jiangbo [University of Chicago, IL (United Sta↗

Large-scale simulations of Floquet physics on near-term quantum computers

Abstract Periodically driven quantum systems exhibit a diverse set of phenomena but are more challenging to simulate than their equilibrium counterparts. Here, we introduce the Quantum High-Frequency Floquet Simulation (QHiFFS) algorithm as a method to simulate fast-driven quantum systems on quantum hardware. Central to QHiFFS is the concept of a kick operator which transforms the system into a basis where the dynamics is governed by a time-independent effective Hamiltonian. This allows prior methods for time-independent simulation to be lifted to simulate Floquet systems. We use the periodically driven biaxial next-nearest neighbor Ising (BNNNI) model, a natural test bed for quantum frustrated magnetism and criticality, as a case study to illustrate our algorithm. We implemented a 20-qubit simulation of the driven two-dimensional BNNNI model on Quantinuum’s trapped ion quantum computer. Our error analysis shows that QHiFFS exhibits not only a cubic advantage in driving frequency ω but also a linear advantage in simulation time t compared to Trotterization.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Simulations of Quantum Approximate Optimization Algorithm on HPC-QC Integrated Systems

The Quantum Approximate Optimization Algorithm (QAOA) has emerged as a promising tool for accelerating optimization processes in the Noisy Intermediate-Scale Quantum (NISQ) era. Compared to classical methods, QAOA efficiently solves optimization problems, often formulated as Quadratic Unconstrained Binary Optimization (QUBO) problems. Classical quantum simulators are crucial for evaluating quantum algorithms due to limited quantum resources. However, QAOA's performance can vary with different simulation methods. This study analyzes QAOA's performance using various quantum simulators (e.g., density _matrix, statevector, and matrix_product_state) and demonstrates the benefits of HPC-QC integrated systems in solving QUBO problems on an active learning workflow. By simulating QAOA on dense, large-matrix QUBO problems, we evaluate accuracy and problem-solving time. We also assess QAOA's performance on local computers and HPC-QC inte-grated systems, using Oak Ridge Leadership Computing Facility (OLCF)'s Frontier supercomputer with local Qiskit Aer and remote IBM Quantum simulators.

Kim, Seongmin [ORNL] (ORCID:0000000159063004)↗

Understanding processes that control dust spatial distributions with global climate models and satellite observations

Dust aerosol is important in modulating the climate system at local and global scales, yet its spatiotemporal distributions simulated by global climate models (GCMs) are highly uncertain. In this study, we evaluate the spatiotemporal variations of dust extinction profiles and dust optical depth (DOD) simulated by the Community Earth System Model version 1 (CESM1) and version 2 (CESM2), the Energy Exascale Earth System Model version 1 (E3SMv1), and the Modern-Era Retrospective analysis for Research and Applications version 2 (MERRA-2) against satellite retrievals from Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP), Moderate Resolution Imaging Spectroradiometer (MODIS), and Multi-angle Imaging SpectroRadiometer (MISR). We find that CESM1, CESM2, and E3SMv1 underestimate dust transport to remote regions. E3SMv1 performs better than CESM1 and CESM2 in simulating dust transport and the northern hemispheric DOD due to its higher mass fraction of fine dust. CESM2 performs the worst in the Northern Hemisphere due to its lower dust emission than in the other two models but has a better dust simulation over the Southern Ocean due to the overestimation of dust emission in the Southern Hemisphere. DOD from MERRA-2 agrees well with CALIOP DOD in remote regions due to its higher mass fraction of fine dust and the assimilation of aerosol optical depth. The large disagreements in the dust extinction profiles and DOD among CALIOP, MODIS, and MISR retrievals make the model evaluation of dust spatial distributions challenging. Our study indicates the importance of representing dust emission, dry/wet deposition, and size distribution in GCMs in correctly simulating dust spatiotemporal distributions.

54 ENVIRONMENTAL SCIENCES↗

cyquandyn

CyQuanDyn is a collection of codes developed for modelling the phonon-induced carrier pumping in ZrTe5 system. Codes in the collection include 1) TLS: time-dependent two-orbital spinless fermion Bogoliubov-de Gennes Hamiltonian simulation, 2) TDSE: ab initio time-dependent Schrödinger equation simulation of the ZrTe5 system under the periodic modulation of A1g Raman mode. Associated publication is T. Jiang, P. P. Orth, L. Luo, L.-L. Wang, F. Zhang, C.-Z. Wang, J. Zhao, K.-M. Ho, J. Wang, and Y.-X. Yao, Ab-Initio Simulations of Coherent Phonon-Induced Pumping of Carriers in ZrTe5. [arXiv:2304.08449 (2023).](https://arxiv.org/abs/2304.08449)

Yao, Yongxin↗

DSS-SimPy-RL (Open-DSS and SimPy based Cyber-Physical RL environment) [SWR-23-29]

Recently, numerous data-driven approaches to control an electric grid using machine learning techniques have been investigated. With the advancement of reinforcement learning (RL) based techniques, gradually the conventional optimization based solvers are being replaced with RL approach where there is uncertainty in the environment such as renewable generation or cyber system emulation. However, to train an agent efficiently, it requires numerous interactions with an environment to learn the best policies. There are numerous RL environments for the power systems based on some well-known simulators, similarly there are environment for communication domains. While majority of the cyber emulators are based in an UNIX environment, the power simulators are based in the Windows-based operating system, the generation of cyber-physical mixed domain RL environment has been challenging. Existing co-simulation methods are efficient but resource and time intensive to generate large scale data set for training RL agents. Hence, this software focuses on development and validation of a mixed domain RL environment using Open DSS for the physical side and leverages a discrete event simulator python package, SimPy, for cyber-side emulation which is Operating Systems agnostic. Further utilizing this software co-simulation and training RL agents for re-routing based resilient control for network reconfiguration and volt-var control in power distribution feeder are performed.

Sahu, Abhijeet↗