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At least 1,459 records · Page 81

A red-emitting carborhodamine for monitoring and measuring membrane potential

Biological membrane potentials, or voltages, are a central facet of cellular life. Optical methods to visualize cellular membrane voltages with fluorescent indicators are an attractive complement to traditional electrode-based approaches, since imaging methods can be high throughput, less invasive, and provide more spatial resolution than electrodes. Recently developed fluorescent indicators for voltage largely report changes in membrane voltage by monitoring voltage-dependent fluctuations in fluorescence intensity. However, it would be useful to be able to not only monitor changes but also measure values of membrane potentials. This study discloses a fluorescent indicator which can address both. We describe the synthesis of a sulfonated tetramethyl carborhodamine fluorophore. When this carborhodamine is conjugated with an electron-rich, methoxy (-OMe) containing phenylenevinylene molecular wire, the resulting molecule, CRhOMe, is a voltage-sensitive fluorophore with red/far-red fluorescence. Using CRhOMe, changes in cellular membrane potential can be read out using fluorescence intensity or lifetime. In fluorescence intensity mode, CRhOMe tracks fast-spiking neuronal action potentials (APs) with greater signal-to-noise than state-of-the-art BeRST 1 (another voltage-sensitive fluorophore). CRhOMe can also measure values of membrane potential. The fluorescence lifetime of CRhOMe follows a single exponential decay, substantially improving the quantification of membrane potential values using fluorescence lifetime imaging microscopy (FLIM). The combination of red-shifted excitation and emission, mono-exponential decay, and high voltage sensitivity enable fast FLIM recording of APs in cardiomyocytes. The ability to both monitor and measure membrane potentials with red light using CRhOMe makes it an important approach for studying biological voltages.

59 BASIC BIOLOGICAL SCIENCES↗

Spatial Profile and Beam Composition Measurements of the University of Wisconsin Inertial Electrostatic Confinement Laboratory Ion Guns

A custom designed and manufactured set of ion guns has been in use at the University of Wisconsin Inertial Electrostatic Confinement Laboratory for both beam fusion experiments and materials implantation experiments. For the first time, direct measurements have been made on the spatial profiles and the mass compositions of He and D ion beams produced by these guns. The results validate assumptions about the circular Gaussian spatial profiles for both He and D ion beams. Mass composition measurements of the He beam identified a pressure-dependent minimum impurity content of 15% N + . The D beam contained relative molecular ion fractions of 58% D 3 + , 32% D 2 + , and 10% D + with impurities of 15% to 20% D 2 O + . Finally, a new experimental platform, the Ion Beam and Source Analyzer was developed to perform these experiments on the ion guns used to irradiate candidate fusion materials.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Aberration-corrected STEM imaging of 2D materials: Artifacts and practical applications of threefold astigmatism

High-resolution scanning transmission electron microscopy (HR-STEM) with spherical aberration correction enables researchers to peer into two-dimensional (2D) materials and correlate the material properties with those of single atoms. The maximum intensity of corrected electron beam is confined in the area having sub-angstrom size. Meanwhile, the residual threefold astigmatism of the electron probe implies a triangular shape distribution of the intensity, whereas its tails overlap and thus interact with several atomic species simultaneously. The result is the resonant modulation of contrast that interferes the determination of phase transition of 2D materials. Here, we theoretically reveal and experimentally determine the origin of resonant modulation of contrast and its unintended impact on violating the power-law dependence of contrast on coordination modes between transition metal and chalcogenide atoms. The finding illuminates the correlation between atomic contrast, spatially inequivalent chalcogenide orientation, and residual threefold astigmatism on determining the atomic structure of emerging 2D materials.

36 MATERIALS SCIENCE↗

Classical Benchmarks for Variational Quantum Eigensolver Simulations of the Hubbard Model

Simulating the Hubbard model is of great interest to a wide range of applications within condensed matter physics, however its solution on classical computers remains challenging in dimensions larger than one. The relative simplicity of this model, embodied by the sparseness of the Hamiltonian matrix, allows for its efficient implementation on quantum computers, and for its approximate solution using variational algorithms such as the variational quantum eigensolver. While these algorithms have been shown to reproduce the qualitative features of the Hubbard model, their quantitative accuracy in terms of producing true ground state energies and other properties, and the dependence of this accuracy on the system size and interaction strength, the choice of variational ansatz, and the degree of spatial inhomogeneity in the model, remains unknown. Here we present a rigorous classical benchmarking study, demonstrating the potential impact of these factors on the accuracy of the variational solution of the Hubbard model on quantum hardware, for systems with up to 32 qubits. We find that even when using the most accurate wavefunction ansätze for the Hubbard model, the error in its ground state energy and wavefunction plateaus for larger lattices, while stronger electronic correlations magnify this issue. Concurrently, spatially inhomogeneous parameters and the presence of off-site Coulomb interactions only have a small effect on the accuracy of the computed ground state energies. Our study highlights the capabilities and limitations of current approaches for solving the Hubbard model on quantum hardware, and we discuss potential future avenues of research.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Theory of flux anisotropies in a guiding center plasma

The one particle distribution function f on the scale of the bounce motion of particles in a magnetic field B is considered. The Vlasov equation is expanded through O(epsilon) in the adiabatic parameter which is the ratio of particle gyroradius to scale length of the magnetic field. Because f is directly proportional to particle flux differential in kinetic energy and solid angle, f is in principle measurable in space experiments, and the analysis is tailored to be explicitly applicable to space problems. To O(1), f is gyrotropic; its first velocity moment is (if non-vanishing) parallel to B, and hence macroscopic parallel flow is included in this term. The O(epsilon) contribution is non-gyrotropic and macroscopic flow parallel to B plus additional parallel flow results from these terms. The degree of non-gyrotropy and the amount of cross-field macroscopic flow depend on the perpendicular component of the electric field, on curvature and shear in the magnetic field, and on the spatial gradient, pitch angle derivative, and speed derivative of the lowest order distribution function.

Birmingham, T. J.↗

Optical design of a stigmatic spectroheliometer for photometric studies of dynamic phenomena at extreme-ultraviolet wavelengths

The design of a stigmatic spectroheliometer for photometric studies of dynamic phenomena in the solar atmosphere at extreme ultraviolet (EUV) wavelengths is described. The normal-incidence spectrometer requires only one reflective surface, and is equipped with a series of exit slits and associated one-dimensional detector arrays that are mounted at the secondary (vertical) foci of the concave diffraction grating. It is shown that such a spectrometer mounted at the focus of an off-axis paraboloid telescope mirror of the size employed in the EUV spectroheliometer flown on Skylab could record monochromatic images of a 2 x 2 (arcmin) sq field-of-view with a spatial resolution element of 1 x 1 (arcsec) sq in a time of 4 s, 24 s, or 4 min, depending on whether the region studied is flaring, active, or quiet. The resulting spectroheliograms would have an average photometric precision of 10% and a spectral purity of 0.1 A.

Huber, M. C. E.↗

The energetics of resistive magnetic tearing

A new treatment of the energetics of resistive magnetic tearing is presented. This instability is the only known field-reconnection mechanism which develops in time, and is thus a primary candidate for a number of astrophysical 'flare' processes occurring in stressed magnetic fields. The tearing process is elucidated by a subdivision into magnetic regions of different characteristics: first, as dominated by resistive or highly conductive dynamics, and then by function as a source or sink of the energy flux. Matching conditions between these zones provide a determination of the growth rate and its physical-parameter dependence. The observable plasma energy outputs, due mainly to two distinct magnetically driven acceleration mechanisms, are estimated and their directive spatial properties shown. Finally, the generality of resistive tearing is demonstrated by an application of the previous considerations to realistic sheared-field configurations, including the case of a solar coronal loop, for which flare-instability thresholds and energy-deposition sites are described.

Van Hoven, G.↗

System for near real-time crustal deformation monitoring

A system is described for use in detecting earth crustal deformation using an RF interferometer technique for such purposes as earthquake predictive research and eventual operational predictions. A lunar based RF transmission or transmissions from earth orbiting satellites are received at two locations on Earth, and a precise time dependent phase measurement is made of the RF signal as received at the two locations to determine two or three spatial parameters of the antenna relative positions. The received data are precisely time tagged and land-line routed to a central station for real-time phase comparison and analysis. By monitoring the antenna relative positions over an extended period of months or years, crustal deformation of the Earth can be detected.

Macdoran, P. F.↗

Measurements of light background at large depth in the ocean

The mean intensity of Cerenkov emission from the products of K(40) decay and bioluminescence was measured at depths to 5 km. The intensity of ocean light background is found to depend upon depth and at the 5 km level is equal on averaged to 300 + or - 60 quanta/sq cms into spatial angle of 2 pi sterradian in transparency window. The amplitudes, duration and number of BL flashes were measured at various depths. The intensive flashes due to BL are shown to be observed rather seldom at depths over 4 km.

Bannykh, A. E.↗

Cloud absorption radiometer

The Cloud Absorption Radiometer (CAR) was developed to measure spectrally how light is scattered by clouds and to determine the single scattering albedo, important to meteorology and climate studies, with unprecedented accuracy. This measurement is based on ratios of downwelling to upwelling radiation within clouds, and so is not strongly dependent upon absolute radiometric calibration of the instrument. The CAR has a 5-inch aperture and 1 degree IFOV, and spatially scans in a plane orthogonal to the flight vector from the zenith to nadir at 1.7 revolutions per second. Incoming light is measured in 13 spectral bands, using silicon, germanium, and indium-antimonide detectors. Data from each channel is digitally recorded in flight with 10-bit (0.1 percent) resolution. The instrument incorporates several novel features. These features are briefly detailed.

Strange, M. G.↗

Three-dimensional flux-split Euler schemes involving unstructured dynamic meshes

Improved algorithms for the solution of the three-dimensional time-dependent Euler equations are presented for aerodynamic analysis involving unstructured dynamic meshes. The improvements have been developed recently to the spatial and temporal discretizations used by unstructured grid flow solvers. The spatial discretization involves a flux-split approach which is naturally dissipative and captures shock waves sharply with at most one grid point within the shock structure. The temporal discretization involves either an explicit time-integration scheme using a multi-stage Runge-Kutta procedure or an implicit time-integration scheme using a Gauss-Seidel relaxation procedure which is computationally efficient for either steady or unsteady flow problems. With the implicit Gauss-Seidel procedure, very large time steps may be used for rapid convergence to steady state, and the step size for unsteady cases may be selected for temporal accuracy rather than for numerical stability. Steady flow results are presented for both the NACA 0012 airfoil and the ONERA M6 wing to demonstrate applications of the new Euler solvers. The paper presents a description of the Euler solvers along with results and comparisons which assess the capability.

Batina, John T.↗

Implicit flux-split Euler schemes for unsteady aerodynamic analysis involving unstructured dynamic meshes

Improved algorithm for the solution of the time-dependent Euler equations are presented for unsteady aerodynamic analysis involving unstructured dynamic meshes. The improvements were developed recently to the spatial and temporal discretizations used by unstructured grid flow solvers. The spatial discretization involves a flux-split approach which is naturally dissipative and captures shock waves sharply with at most one grid point within the shock structure. The temporal discretization involves an implicit time-integration scheme using a Gauss-Seidel relaxation procedure which is computationally efficient for either steady or unsteady flow problems. For example, very large time steps may be used for rapid convergence to steady state, and the step size for unsteady cases may be selected for temporal accuracy rather than for numerical stability. Steady and unsteady flow results are presented for the NACA 0012 airfoil to demonstrate applications of the new Euler solvers. The unsteady results were obtained for the airfoil pitching harmonically about the quarter chord. The resulting instantaneous pressure distributions and lift and moment coefficients during a cycle of motion compare well with experimental data. A description of the Euler solvers is presented along with results and comparisons which assess the capability.

Batina, John T.↗

Accuracy of an unstructured-grid upwind-Euler algorithm for the ONERA M6 wing

Improved algorithms for the solution of the three-dimensional, time-dependent Euler equations are presented for aerodynamic analysis involving unstructured dynamic meshes. The improvements have been developed recently to the spatial and temporal discretizations used by unstructured-grid flow solvers. The spatial discretization involves a flux-split approach that is naturally dissipative and captures shock waves sharply with at most one grid point within the shock structure. The temporal discretization involves either an explicit time-integration scheme using a multistage Runge-Kutta procedure or an implicit time-integration scheme using a Gauss-Seidel relaxation procedure, which is computationally efficient for either steady or unsteady flow problems. With the implicit Gauss-Seidel procedure, very large time steps may be used for rapid convergence to steady state, and the step size for unsteady cases may be selected for temporal accuracy rather than for numerical stability. Steady flow results are presented for both the NACA 0012 airfoil and the Office National d'Etudes et de Recherches Aerospatiales M6 wing to demonstrate applications of the new Euler solvers. The paper presents a description of the Euler solvers along with results and comparisons that assess the capability.

Batina, John T.↗

Computation of three-dimensional flows using two stream functions

An approach to compute 3-D flows using two stream functions is presented. The method generates a boundary fitted grid as part of its solution. Commonly used two steps for computing the flow fields are combined into a single step in the present approach: (1) boundary fitted grid generation; and (2) solution of Navier-Stokes equations on the generated grid. The presented method can be used to directly compute 3-D viscous flows, or the potential flow approximation of this method can be used to generate grids for other algorithms to compute 3-D viscous flows. The independent variables used are chi, a spatial coordinate, and xi and eta, values of stream functions along two sets of suitably chosen intersecting stream surfaces. The dependent variables used are the streamwise velocity, and two functions that describe the stream surfaces. Since for a 3-D flow there is no unique way to define two sets of intersecting stream surfaces to cover the given flow, different types of two sets of intersecting stream surfaces are considered. First, the metric of the (chi, xi, eta) curvilinear coordinate system associated with each type is presented. Next, equations for the steady state transport of mass, momentum, and energy are presented in terms of the metric of the (chi, xi, eta) coordinate system. Also included are the inviscid and the parabolized approximations to the general transport equations.

Greywall, Mahesh S.↗

Microwave emission from a sunspot. II - The center-to-limb variation

The center-to-limb variation of both the spectral and spatial brightness distributions is investigated using a series of microwave observations of a sunspot in the active region NOAA 4741. Depending on the heliocentric position of the sunspot, the microwave emission appears in two typical profiles: either a ring structure near the center of the disk or a single-peak structure near the limb. Due to the increase of the gyroresonance opacity of the field lines near the spot center as the viewing angle increases, the brightness temperature at high, optically thin frequencies increases slightly as the spot approaches the limb. In addition, a change of effective harmonic, which accompanies a discontinuous change in the degree of polarization, characterizes the center-to-limb variation of the gyroresonance spectrum. Finally, the height of the gyroresonance layer, low in the corona of the active region, is determined from a change of spectrum from gyroresonance to free-free emission as the spot passes over the solar limb.

Lee, Jeongwoo W.↗

Estimation of the fractional coverage of rainfall in climate models

The fraction of the grid cell area covered by rainfall, mu, is an essential parameter in descriptions of land surface hydrology in climate models. A simple procedure is presented for estimating this fraction, based on extensive observations of storm areas and rainfall volumes. Storm area and rainfall volume are often linearly related; this relation can be used to compute the storm area from the volume of rainfall simulated by a climate model. A formula is developed for computing mu, which describes the dependence of the fractional coverage of rainfall on the season of the year, the geographical region, rainfall volume, and the spatial and temporal resolution of the model. The new formula is applied in computing mu over the Amazon region. Significant temporal variability in the fractional coverage of rainfall is demonstrated. The implications of this variability for the modeling of land surface hydrology in climate models are discussed.

Eltahir, E. A. B.↗

Streamwise computation of three-dimensional flows using two stream functions

An approach to compute 3D flows using two stream functions is presented. The independent variables used are chi, a spatial coordinate, and xi and eta, values of stream functions along two sets of suitably chosen intersecting stream surfaces. The dependent variables used are the streamwise velocity, and two functions that describe the stream surfaces. Since the value of a stream function is constant along the solid boundaries, this choice of variables makes it easy to satisfy the boundary conditions. To illustrate the approach, computations of incompressible potential flow through a circular-to-rectangular transition duct are also presented.

Greywall, M. S.↗

In-Flight Flow Visualization Using Infrared Thermography

The feasibility of remote infrared thermography of aircraft surfaces during flight to visualize the extent of laminar flow on a target aircraft has been examined. In general, it was determined that such thermograms can be taken successfully using an existing airplane/thermography system (NASA Dryden's F-18 with infrared imaging pod) and that the transition pattern and, thus, the extent of laminar flow can be extracted from these thermograms. Depending on the in-flight distance between the F-18 and the target aircraft, the thermograms can have a spatial resolution of as little as 0.1 inches. The field of view provided by the present remote system is superior to that of prior stationary infrared thermography systems mounted in the fuselage or vertical tail of a subject aircraft. An additional advantage of the present experimental technique is that the target aircraft requires no or minimal modifications. An image processing procedure was developed which improves the signal-to-noise ratio of the thermograms. Problems encountered during the analog recording of the thermograms (banding of video images) made it impossible to evaluate the adequacy of the present imaging system and image processing procedure to detect transition on untreated metal surfaces. The high reflectance, high thermal difussivity, and low emittance of metal surfaces tend to degrade the images to an extent that it is very difficult to extract transition information from them. The application of a thin (0.005 inches) self-adhesive insulating film to the surface is shown to solve this problem satisfactorily. In addition to the problem of infrared based transition detection on untreated metal surfaces, future flight tests will also concentrate on the visualization of other flow phenomena such as flow separation and reattachment.

vanDam, C. P.↗