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At least 1,459 records · Page 81

National Space Science Data Center data archive and distribution service (NDADS) automated retrieval mail system user's guide

The National Space Science Data Center (NSSDC) has developed an automated data retrieval request service utilizing our Data Archive and Distribution Service (NDADS) computer system. NDADS currently has selected project data written to optical disk platters with the disks residing in a robotic 'jukebox' near-line environment. This allows for rapid and automated access to the data with no staff intervention required. There are also automated help information and user services available that can be accessed. The request system permits an average-size data request to be completed within minutes of the request being sent to NSSDC. A mail message, in the format described in this document, retrieves the data and can send it to a remote site. Also listed in this document are the data currently available.

Perry, Charleen M.↗

Software for Optical Archive and Retrieval (SOAR) user's guide, version 4.2

The optical disk is an emerging technology. Because it is not a magnetic medium, it offers a number of distinct advantages over the established form of storage, advantages that make it extremely attractive. They are as follows: (1) the ability to store much more data within the same space; (2) the random access characteristics of the Write Once Read Many optical disk; (3) a much longer life than that of traditional storage media; and (4) much greater data access rate. Software for Optical Archive and Retrieval (SOAR) user's guide is presented.

Davis, Charles↗

Configuration and Implementation

The main objectives of a Planetary Data System (PDS) are to curate planetary data - that is to store and maintain complete planetary data sets and the necessary supporting documentation to make them useful - and to facilitate scientific study of these data through improved organization and access. A hardware system, no matter how sophisticated and supportive, cannot replace the live colleague interaction needed for good science.System users with only a general knowledge of a data file or data set will need guidance in determining whether that data is most appropriate to support a theory. The PDS is meant to allow easy access to data, to provide useful presentations of that data, and to facilitate data analysis; however it is not designed to supercede the critical examination and interactions that data analysis requires. The Planetary Data System will be a powerful research tool which allows the entire planetary science community access to a complete data and will facilitate the archiving of pass, current, and future mission data sets.

Source record↗

Data for "Soil carbon dynamics during drying vs. rewetting: Importance of antecedent moisture conditions"

This dataset contains data used for the paper "Soil carbon dynamics during drying vs. rewetting: importance of antecedent moisture conditions". The Related References field will be updated with a full citation when available.Soil moisture influences soil carbon dynamics, including microbial growth and respiration. The response of such ‘soil respiration’ to moisture changes is generally assumed to be linear and reversible, i.e. to depend only on the current moisture state. Current models thus do not account for antecedent soil moisture conditions when determining soil respiration or the available substrate pool. We conducted a laboratory incubation to determine how the antecedent conditions of drought and flood influenced soil organic matter (SOM) chemistry, bioavailability, and respiration. We sampled soils from an upland coastal forest, Beaver Creek, WA USA, and subjected them to drying and rewetting treatments. For the drying treatment, field moist soils were saturated and then dried to 75, 50, 35, and 5 % saturation. In the rewetting treatment, field moist soils were air-dried and then rewet to 35, 50, 75, and 100 % saturation. We measured respiration and water extractable organic carbon (WEOC) concentrations and used 1H-NMR and FT-ICR-MS to characterize the WEOC pool across the treatments. The drying vs. wetting treatment strongly influenced SOM bioavailability, as rewet soils (with antecedent drought) had greater WEOC concentrations and respiration fluxes compared to the drying soils (with antecedent flood). In addition, air-dry soils had the highest WEOC concentrations, and the NMR-resolved peaks showed a strong contribution of protein groups in these soils. Both NMR and FT-ICR-MS analyses indicated increased contribution of complex aromatic groups/molecules in the rewet soils, compared to the drying soils. We suggest that drying introduced organic matter into the WEOC pool via desorption of aromatic molecules and/or by microbial cell lysis, and this stimulated microbial mineralization rates. Our work indicates that even short-term shifts in antecedent moisture conditions can strongly influence soil C dynamics at the core scale. The predictive uncertainties in current soil models may be reduced by a more accurate representation of soil water and C persistence that includes a mechanistic and quantitative understanding of the impact of antecedent moisture conditions.This dataset contains a compressed (.zip) archive of the data and R scripts used for this manuscript. The dataset includes files in .csv and .txt format, which can be accessed and processed using MS Excel or R. NMR data are provided as raw output data (accessed in Bruker TopSpin or MestreNova) as well as the MestreNova-processed files. This archive can also be accessed on GitHub at https://github.com/kaizadp/hysteresis_and_soil_carbon (DOI: 10.5281/zenodo.4432885).

1H-NMR↗

FaceBase 3: analytical tools and FAIR resources for craniofacial and dental research

ABSTRACT The FaceBase Consortium was established by the National Institute of Dental and Craniofacial Research in 2009 as a ‘big data’ resource for the craniofacial research community. Over the past decade, researchers have deposited hundreds of annotated and curated datasets on both normal and disordered craniofacial development in FaceBase, all freely available to the research community on the FaceBase Hub website. The Hub has developed numerous visualization and analysis tools designed to promote integration of multidisciplinary data while remaining dedicated to the FAIR principles of data management (findability, accessibility, interoperability and reusability) and providing a faceted search infrastructure for locating desired data efficiently. Summaries of the datasets generated by the FaceBase projects from 2014 to 2019 are provided here. FaceBase 3 now welcomes contributions of data on craniofacial and dental development in humans, model organisms and cell lines. Collectively, the FaceBase Consortium, along with other NIH-supported data resources, provide a continuously growing, dynamic and current resource for the scientific community while improving data reproducibility and fulfilling data sharing requirements.

60 APPLIED LIFE SCIENCES↗

High Resolution Ocean Surface Wave Hindcast (US Wave) Data

The development of this dataset was funded by the U.S. Department of Energy, Office of Energy Efficiency & Renewable Energy, Water Power Technologies Office to improve our understanding of the U.S. wave energy resource and to provide critical information for wave energy project development and wave energy converter design. This high resolution publicly available long-term wave hindcast dataset will - when complete - cover the entire U.S. Exclusive Economic Zone (EEZ). Available data includes the Hawaiian Islands, West and Atlantic Coasts, with future additions including the Alaskan coasts, Gulf of Mexico and the Freely associated States. The data can be used to investigate the historical record of wave statistics at any U.S. site. As such, the dataset could also be of value to any entity with marine operations inside the U.S. EEZ. These data are available for download without login credentials through the free and publicly accessible Open Energy Data Initiative (OEDI) data viewer which allows users to browse and download individual or groups of files.

16 TIDAL AND WAVE POWER↗

Bridging Time-series Image Phenotyping and Functional–Structural Plant Modeling to Predict Adventitious Root System Architecture

Root system architecture (RSA) is an important measure of how plants navigate and interact with the soil environment. However, current methods in studying RSA must make tradeoffs between precision of data and proximity to natural conditions, with root growth in germination papers providing accessibility and high data resolution. Functional–structural plant models (FSPMs) can overcome this tradeoff, though parameterization and evaluation of FSPMs are traditionally based in manual measurements and visual comparison. Here, we applied a germination paper system to study the adventitious RSA and root phenology of Populus trichocarpa stem cuttings using time-series image-based phenotyping augmented by FSPM. We found a significant correlation between timing of root initiation and thermal time at cutting collection (P value = 0.0061, R 2 = 0.875), but little correlation with RSA. We also present a use of RhizoVision [1] for automatically extracting FSPM parameters from time series images and evaluating FSPM simulations. A high accuracy of the parameterization was achieved in predicting 2D growth with a sensitivity rate of 83.5%. This accuracy was lost when predicting 3D growth with sensitivity rates of 38.5% to 48.7%, while overall accuracy varied with phenotyping methods. Despite this loss in accuracy, the new method is amenable to high throughput FSPM parameterization and bridges the gap between advances in time-series phenotyping and FSPMs.

60 APPLIED LIFE SCIENCES↗

The Seasat algorithm development facility at JPL

The Seasat-A spacecraft, scheduled for launch in May 1978, will produce a global ocean data set covering a one-year nominal mission. Because this is a proof-of-concept mission, data processing algorithms are expected to evolve as the data base grows. To support the evolution and evaluation of algorithms, and to experiment with various techniques for processing the data, an algorithm development facility (ADF) is being developing. The ADF will provide access to the data base and to highly modularized processing programs. The processing programs will be subject to easy and frequent modification by a remote user community of sensor managers and experiment teams, who will use this capability to evaluate the overall performance of the sensors and the algorithms using surface truth data. The ADF concepts of software standardization and interface control are expected to have general applicability for adaptive data processing systems.

Brown, J. W.↗

Development of the Centralized Storm Information System (CSIS) for use in severe weather prediction

The centralized storm information system is now capable of ingesting and remapping radar scope presentations on a satellite projection. This can be color enhanced and superposed on other data types. Presentations from more than one radar can be composited on a single image. As with most other data sources, a simple macro establishes the loops and scheduling of the radar ingestions as well as the autodialing. There are approximately 60 NWS network 10 cm radars that can be interrogated. NSSFC forecasters have found this data source to be extremely helpful in severe weather situations. The capability to access lightning frequency data stored in a National Weather Service computer was added. Plans call for an interface with the National Meteorological Center to receive and display prognostic fields from operational computer forecast models. Programs are to be developed to plot and display locations of reported severe local storm events.

Mosher, F. R.↗

MST data exchange through the NCAR incoherent-scatter radar data base

One means of making MST (mesosphere stratosphere troposphere) radar data more easily accessible for scientific research by the general scientific community is through a centralized data base. Such a data base can be designed to readily provide information on data availability and quality, and to provide copies of data from any radar in a common format to the user. The ionospheric incoherent scatter community has established a centralized data base at NCAR that may serve not only as a model for a possible MST data base, but also as a catalyst for getting an MST data base started. (Some key elements of the NCAR data base are given.) The NCAR data base can include MST data in the same framework with relatively little extra effort. They are willing to handle MST data on a limited basis in order to permit assessment of community interest and in order to provide some experience with a centralized data base for MST data.

Richmond, A. D.↗

S-Chart - Scheduling-Chart Program

Schedule Chart Program (S-Chart) produces quickly, through array of simple menu choices, high-quality Gantt-type scheduling and production time-line charts with minimal data-entry requirements. Significant features include: speed and ease of use with menu-driven selections from start to finish; storage and catalogs of all sets of data for rapid access and manipulation; compact program to permit storage of dozens of sets of data on program disk; and creation of ASCII text files of graphs for rapid printing. Written in ASCII code.

Klinkner, Eric R.↗

PNNL DataHub NIAID Program Project: Modeling Host Responses to Understand Severe Human Virus Infections, Multi-Omic Viral Dataset Catalog Collection

The National Institute of Allergy and Infectious Diseases (NIAID) "Modeling Host Responses to Understand Severe Human Virus Infections" program project was a highly integrated and comprehensive systems biology research core, funded by the National Institute of Health (U19AI106772) from 2013-06-01 to 2018-05-31, investigating the complex host response to category A, B, and C priority pathogen infections. Resulting project deliverables include an extensive comprehensive collections of linked primary and secondary transformation viral experimental infection data. Here we provide a never before released comprehensive infectious disease collection of primary and secondary transformation multi-Omics data profiling a series of priority pathogen primary experimental studies for enhanced open access to viral Omics lifecycle datasets and project metadata. Using a highly integrated and multidisciplinary approach, linked primary data and metadata supporting secondary normalization datasets, provide critical information necessary for research reproducibility and long-term preservation. Enabling on-demand data access for research community consumption and developer reuse, serves to support new mechanistic insights and discoveries into host-pathogen interactions for aiding future biohazard data preparedness efforts in emergency response to global health crises involving viral infection.

59 BASIC BIOLOGICAL SCIENCES↗

dCache - Keeping up With the Evolution of Science

The dCache project provides open-source software deployed internationally to satisfy ever more demanding storage requirements of various scientific communities. Its multifaceted approach provides an integrated way of supporting different use-cases with the same storage, from high throughput data ingest, through wide access and easy integration with existing systems, including event driven workflow management. With this presentation, we will show some of the recent developments that optimize data management and access to maximise the gain from stored data.

Mkrtchyan, Tigran↗

Tidal Turbine Test, Downeast Turbines, July 12, 2021

Downeast Turbines tested a tidal turbine prototype with novel rotor/channel system and lateral effluent discharge apparatus (LEDA), during five days of testing in the flume at Alden Lab. Three days of testing (July 12-14, 2021) focused on turbine power metrics of torque and rpm, which were low, and then two days of follow-up testing (July 27-28, 2021) focused on LEDA performance metrics of pressure differential and rates of volumetric flow, with encouraging results. Next step is to to characterize, and even optimize, configurations of the LEDA, using 3D-CFD as a helpful tool, to refine its shape and explore its limits of performance as a means of effluent discharge that augments performance of an instream turbine. An improved configuration of the LEDA will be re-combined with the rotor/channel system of the turbine prototype, and ultimately, the rotor will be re-sized (enlarged), to better match the LEDA's performance capabilities in drawing through a rate of volumetric flow. This submission is Downeast Turbines' Post Access Report for the test event. It includes the files described here (next below), and several reference links. "Downeast TEAMER-Post-Access-Report...docx" is a document file containing the report. "Appendices A, B, and C" are included in this file, and so are "Figures #1-7." "Appendix D - Test Data Workbooks.zip" is an archive file containing all post access data (raw data tables, calculating tables, and graphs), presented in fourteen Excel workbooks as described in the report. "Appendix E - Post Access Figures.zip" is an archive file containing "Figures #8-52," of the report.

16 TIDAL AND WAVE POWER↗

Urban Parameters Maricopa County 100m Grid Spacing

132 urban parameters for Maricopa County are provided in WRF-readable binary form at 100m grid spacing with index. These parameters allow regional weather modelers to account for the contribution of built structures in modeling the urban heat island. This data is also provided in CSV format. Data are generated using 2023 Model America Version 1 data (https://www.osti.gov/biblio/1774134) and will be used to represent the urban morphology in Maricopa County to the WRF model for experiments conducted for the Southwest Urban Corridor Integrated Field Laboratory (SW-IFL). Three files associated with these parameters are included in this repository: index, binary file 00001-01549.00001-01796, Maricopa_Parameters_03072024.csv . To use the binary file with the Weather Research and Forecasting (WRF) model, the binary file and the index file must be placed in their own directory in WRF_GEOG and accessed in the same way the National Urban Database and Access Portal Tool data (NUDAPT44) would be accessed. The name of the binary file must be in the format: 00001-02715.00001-01803. If, upon download, the binary filename has additional or different characters, please change them to match this format.

54 ENVIRONMENTAL SCIENCES↗

Digital Earth Initiative: A Joint Interagency Program

The Digital Earth is a virtual representation of our planet that enables a person to explore and interact with the vast amounts of natural and cultural information gathered about the Earth. The Digital Earth comprises data interfaces and standards enabling access to geo-referenced data from remote sensing, cartographic, demographic, medical, and other sources to respond to questions posed by the user. In a recent address at the California Science Center in Los Angeles, Vice President Al Gore articulated a Digital Earth Vision. That vision spoke to developing a multi-resolution, three-dimensional representation of the planet, into which we can roam and zoom into vast quantities of embedded geo-referenced data. The vision was not limited to moving through space but also allowing travel over a time-line, which can be set for days, years, centuries, or even geological epochs. As prototypes become available, it would also be possible to interact with the Digital Earth in multiple places around the country with access to high-speed networks and at a more limited level of access over the Internet. NASA was asked by the Vice President to lead an interagency initiative that would take steps to bring this vision to the public. This talk describes the start-up and plans of the Digital Earth Interagency Working Group in the formulation of its charter, an architecture reference model for Digital Earth, public/private partnerships, cooperative agreement notices, Digital Earth prototypes, and testbeds. Animations employing technologies for virtual roaming and zooming through multi-resolution satellite data set as prototype systems will be presented along with examples of potential user scenarios. Plans for engaging academia and industry in implementing the Digital Earth initiative will be discussed.

Halem, Milton↗

The EXOSAT database and archive

The EXOSAT database provides on-line access to the results and data products (spectra, images, and lightcurves) from the EXOSAT mission as well as access to data and logs from a number of other missions (such as EINSTEIN, COS-B, ROSAT, and IRAS). In addition, a number of familiar optical, infrared, and x ray catalogs, including the Hubble Space Telescope (HST) guide star catalog are available. The complete database is located at the EXOSAT observatory at ESTEC in the Netherlands and is accessible remotely via a captive account. The database management system was specifically developed to efficiently access the database and to allow the user to perform statistical studies on large samples of astronomical objects as well as to retrieve scientific and bibliographic information on single sources. The system was designed to be mission independent and includes timing, image processing, and spectral analysis packages as well as software to allow the easy transfer of analysis results and products to the user's own institute. The archive at ESTEC comprises a subset of the EXOSAT observations, stored on magnetic tape. Observations of particular interest were copied in compressed format to an optical jukebox, allowing users to retrieve and analyze selected raw data entirely from their terminals. Such analysis may be necessary if the user's needs are not accommodated by the products contained in the database (in terms of time resolution, spectral range, and the finesse of the background subtraction, for instance). Long-term archiving of the full final observation data is taking place at ESRIN in Italy as part of the ESIS program, again using optical media, and ESRIN have now assumed responsibility for distributing the data to the community. Tests showed that raw observational data (typically several tens of megabytes for a single target) can be transferred via the existing networks in reasonable time.

Reynolds, A. P.↗

A System for Standardizing and Combining U.S. Environmental Protection Agency Emissions and Waste Inventory Data

The U.S. Environmental Protection Agency (USEPA) provides databases that agglomerate data provided by companies or states reporting emissions, releases, wastes generated, and other activities to meet statutory requirements. These databases, often referred to as inventories, can be used for a wide variety of environmental reporting and modeling purposes to characterize conditions in the United States. Yet, users are often challenged to find, retrieve, and interpret these data due to the unique schemes employed for data management, which could result in erroneous estimations or double-counting of emissions. To address these challenges, a system called Standardized Emission and Waste Inventories (StEWI) has been created. The system consists of four python modules that provide rapid access to USEPA inventory data in standard formats and permit filtering and combination of these inventory data. When accessed through StEWI, reported emissions of carbon dioxide to air and ammonia to water are reduced approximately two- and four-fold, respectively, to avoid duplicate reporting. StEWI will greatly facilitate the use of USEPA inventory data in chemical release and exposure modeling and life cycle assessment tools, among other things. To date, StEWI has been used to build the recent USEEIO model and the baseline electricity life cycle inventory database for the Federal LCA Commons.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗