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At least 1,441 records · Page 80

Exploring structural transitions at grain boundaries in Nb using a generalized embedded atom interatomic potential

The advancement in experimental techniques, like the atom probe tomography and high resolution electron microscopy, is fueling interest in studying structural transformations of grain boundaries in metal and alloys to uncover correlations between mechanical properties and solute or impurity segregation to grain boundaries. Atomistic modeling is an important tool that can pinpoint the intricate dynamics of grain boundary phase transitions, but the lack of accurate interatomic potentials needed to simulate the complex dynamics of grain boundary structural transitions and identify different metastable phases has been the bottleneck. To this end, we use niobium as a model body centered cubic (BCC) metal and develop an interatomic potential to study grain boundary phase transitions. The potential for Nb is based on a generalization of the embedded atomic method potential and has sufficient flexibility to learn complex energy landscapes using a small set of training structures. We systematically test and validate the using data from ab initio density functional theory calculations and experiments. Using this potential, we calculate energies of multiple symmetric-tilt grain boundaries spanning a wide range of misorientation angles. Additionally, we explore different metastable structures of the Σ 27(552) [$1\overline{1}0$] grain boundary and use molecular dynamic simulations to study the coexistence of metastable phases and grain boundary transitions at finite temperature.

36 MATERIALS SCIENCE↗

Assessing Composite Structure in Metal–Organic Framework-Polymer Mixed-Matrix Membranes

Metal-organic frameworks (MOFs) are renowned for their tunable structure, porosity, and internal chemistry, with demonstrated applications in molecular separations, storage, and conversion. While they are widely usable, the powdery characteristics of MOF materials can be limiting for large-scale processing and implementation in devices. Incorporating MOF particles into polymer supports affords engineering solutions to overcome these issues, yet the nature of the resulting composites is difficult to assess. Here, in this work, we present spectroscopic and calorimetric methods that we believe help establish a holistic physicochemical picture of the composite structure using a series of Zr MOFs with different pore sizes as a testbed. Power law decays are observed in X-ray scattering profiles in low q-space ranging between 2.4 and 3.3, which we interpret as changes in scattering due to polymer infiltrating MOF particles. This interpretation is supported by solid-state nuclear magnetic resonance spectroscopy and differential scanning calorimetry measurements that identify populations of the MOF-associated polymer. Additionally, positron annihilation lifetime spectroscopy measurements collected on a series of composites with different MOF-polymer ratios show multiple decay constants, each correlated to a different free volume elements. In combination with the spectroscopic, calorimetric, and scattering results, we utilize the trends in decay constants as a function of polymer mass fraction to hypothesize a polymer infiltration mechanism whereby large pores are preferentially filled, followed by small pores and, later still, interstitial spaces between particles. Even with vigorous investigation of polymer, MOF, and interface characteristics, the complex and heterogeneous nature of the composites makes absolute structural assertions difficult. We envision that the approaches demonstrated here will be a useful foundation to assess and ultimately guide the design of future MOF-polymer composites.

36 MATERIALS SCIENCE↗

RLMolLM: Reinforcement Learning-Enhanced Language Model Framework for Inverse Molecular Design

Inverse molecular design faces significant challenges due to vast chemical space and complex property requirements. While language models show promise for molecular generation, they struggle with validity, multi-property optimization, and structural constraints. This work presents RLMolLM, a reinforcement learning framework combining Proximal Policy Optimization (PPO) with genetic algorithms to address these limitations. Our approach optimizes multiple user-specified properties including quantitative estimates of drug-likeness (QED), synthetic accessibility (SA), and ADMET (absorption, distribution, metabolism, excretion, and toxicity) endpoints without requiring complete model retraining, while maintaining capability for scaffold-constrained generation where specific substructures must be preserved. We outperform state-of-the-art methods for molecular optimization, achieving best QED scores across GDB13, Moses, and Zinc datasets with up to 31% improvement over previous methods while maintaining excellent validity, uniqueness, and novelty metrics. For simultaneous multi-property optimization, our framework achieves substantial improvements in ADMET properties including 4.5-fold reduction in hERG toxicity and enhanced Caco-2 permeability compared to Moses dataset. Under structural constraints, the framework significantly improves molecular validity while preserving scaffolds and effectively optimizing properties. In conclusion, this versatile solution advances pharmaceutical and materials molecular design through effective integration of reinforcement learning and genetic algorithms with multi-property optimization and scaffold preservation.

Genetic algorithms↗

Hydrodynamic Test Requirements Process Improvements

Hydrodynamic testing at Los Alamos National Laboratory would benefit from a process improvement for the requirements process. Cameo was used as a digital solution for requirements management to allow Lead Engineers to track requirements more effectively. This was identified as a process improvement throughout this Capstone project. This report includes a project proposal, business case, literature review, methodology, project plan, data analysis, decision-making report, financial analysis report, discussion, and conclusion. Initially, this project focused on figuring out a solution for the hydrotest requirement process improvements. The scope narrowed to focus on the use of Cameo for requirement capture and management. During this Capstone, four tests had digital models produced for requirements management in Cameo. The initial model was the baseline, with core requirements used across the tests. Commonalities in tests were used and the core requirements allowed for process efficiencies. In the data analysis, it was seen that overall, the implementation of using Cameo for requirements resulted in a decreasing trend for both schedule and normalized cost. Tests have different complexity levels which is also a factor in how long the requirements process will take. Additional data is needed to continue analyzing process improvements. Through decisionmaking and financial analysis, the recommendation was to use Cameo for requirements process improvement. Multiple experts provided feedback for requirements that were then captured within models. Numerous tangible and intangible benefits were identified with this process improvement. For return on investment, the metric of success was schedule reduction, which was overall seen. Four tests were analyzed, so future analysis will be needed. There is also not a great financial risk because the main cost would be purchasing more licenses. Individuals must generate requirements whether using this software or not. Overall, training is needed to help improve the skillsets of Lead Engineers but is already being supported on a regular frequency. A desktop guide was started associated with explaining the process, however, it is a work in progress. The team plans on adding additional information in the digital models to help status when requirements are met using verification methods and artifacts. From working on this project an improved understanding of Cameo and requirements was the result. There are future opportunities to extend the usage for requirements management and progress will continue after this project.

99 GENERAL AND MISCELLANEOUS↗

FY24 Task 5: Leachate Disposition

Directly feeding sludge solids to the high-level waste (HLW) Waste Treatment Plant represents an alternative flowsheet seeking to initiate sludge processing as soon as possible. Key processing functions previously captured during baseline pretreatment operations include leaching and washing prior to solids concentration. These operations should be considered in the potential direct feed flowsheets to maximize waste feed loading, minimize HLW volume, and mitigate corrosion challenges associated with vitrification of high phosphate and fluoride concentrations. Additionally, single-shell tank (SST) retrievals and waste transfers to double-shell tanks (DSTs) in a direct feed flowsheet would likely also benefit from some level of leaching, washing, and solids concentration in order to reduce DST space and mission duration. These operations could occur in a new facility or potentially in available DSTs. If washing and leaching are utilized, an effective disposition pathway for the wash water and leachate solutions are needed. Three target species that benefit significantly from leaching and washing are phosphate, fluoride and aluminum. Phosphate (PO 4 3- ) and fluoride (F - ) can contribute substantially to the amount of carrier fluid needed for dissolution, and the resulting volume of liquid generated. Disposition of this retrieval solution should be evaluated in order to prevent crystallization of these anions throughout system processing. Since there is a high probability that any retrieval solutions will be at or near their PO 4 3- and F - solubility limits, evaporation or blending with a high Na supernate (>3.5 M) is not recommended for the wash water streams without a method to remove precipitants prior to solution disposal. Additionally, aluminum present in the southeast quadrant of the Hanford site represents roughly 60% of the waste solids in the initial processing tanks. These aluminum solids are in the form of gibbsite (Al(OH) 3 ) and can pose significant challenges for processing due to the fast-settling times and high solids loading associated with these materials. Easily remediated by caustic addition to the solids, these wash solutions could be processed through crystalline silicotitanate (CST) ion exchange columns to prepare the supernate solutions for disposition. The current target for feed conditions to the Low Activity Waste (LAW) melter are waste streams that contain nominally 5-6 M Na. Fractions within the tanks contain upwards of 0.2 M phosphate and fluoride in solution at 3.5 M Na. Concentrating these solutions above 5 M Na would result in an exceedance of the solubility limits, and potential for uncontrolled precipitation of the phosphate and fluoride crystal material. The resulting crystalline salt material is typically sodium fluoride phosphate, also referred to as natrophosphate (Na 7 FPO 4 ·19H 2 O). Salt phases are of importance in tank waste due to their chemical reactivity, which can result in precipitation, dissolution, or transformation, impacting any downstream processes (Bolling et al. 2020, Russell, Snow, and Peterson 2010). Salt generation and precipitation could pose challenges by causing system plugging and melter corrosion if left in the supernate stream, or limit sodium molarity of the supernate that would be accepted without incident in waste operations. To understand the impact of this salt generation, the crystallization of natrophosphate in multiple simulant feed matrices was studied to understand the implications of various tank waste supernate chemistries. Three matrices were examined: high PO 4 3- /low F - , low PO 4 3- /high F - , and an average matrix. Subsequent testing was performed with the average matrix with the inclusion of CsNO 3 , and a final run with the average matrix including CsNO 3 and a 137 Cs spike for tracer purposes.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

On-policy learning-based deep reinforcement learning assessment for building control efficiency and stability

Artificial intelligence technologies have emerged as a game changer not only in specific applications such as image recognition and machine translation but also in many scientific domains. In particular, as deep reinforcement learning (DRL) has shown great success in complex control problems, DRL-based control has been considered as a potential solution to efficiently control and manage building systems. However, broad assessment of DRL-based building control is still required to characterize their pros and cons in comparison with conventional building control methods (e.g., rule-based feedback controls). In this paper, we assessed DRL-based controls with on-policy learning-based algorithms and continuous control actions for cooling control of large office buildings in the summer season to minimize whole-building energy use and occupant discomfort. We compared DRL-based control methods with two baseline control methods: (1) a pre-determined schedule with supply temperature and static pressure setpoints, and (2) advanced reset method that adjusts setpoints based on heuristic rules, i.e., ASHRAE Guideline 36. We also tested the DRL algorithms to evaluate their performances in multiple climate locations. We found that DRL-based control methods outperformed the baseline control methods in terms of energy savings while maintaining a thermal comfort. DRL reduced energy use between ~4%–22% on average compared to the baseline methods, depending on climate location. We also evaluated DRL-based control in terms of control stability and showed that DRL-based methods should address the span of hardware lifetimes in practical operations.

control stability↗

Entropy-defect synergy for dual luminescence mechanism in spinel: Time-resolved anti-counterfeiting and fingerprint visualization

Multimodal luminescent materials, while promising for anti-counterfeiting, often lack dynamic time-dependent responses and controllable spatial distribution, limiting their encryption capabilities in the spatiotemporal dimension. Here, this work presents a coordinated control strategy based on entropy and defect engineering, and uses a backpropagation (BP) neural network for material screening to successfully prepare spinel Mg 0.8 (Fe 0.04 Co 0.04 Ni 0.04 Cu 0.04 Zn 0.04 )Cr 2 O 4 (MgA 5 CO) phosphors with time-dependent dynamic luminescence behavior. This phosphor simultaneously activated the d-d transition luminescence (∼618 nm) derived from Co 2+ /Cr 3+ and the defect luminescence (∼398 nm) related to zinc vacancies (V Zn ) in a single-phase solid solution. The phosphor exhibits a time-dependent color evolution from pink to purple under fixed-wavelength excitation, due to the different excited-state dynamics and decay lifetimes associated with the d-d transition and defect luminescence. Structural characterization and spectral analysis confirmed the existence of V Zn and its significant role in defect luminescence process. The fluorescent and dynamic luminescent properties of entropy-based spinel oxide enable its use in advanced anti-counterfeiting applications like fingerprint recognition and color-changing dedicated anti-counterfeiting mark, showing promise in high-end and time-dynamic anti-counterfeiting fields. This research not only developed a new type of fluorescent dynamic anti-counterfeiting material, but also provided a new idea for constructing advanced optical functional materials with multiple luminescence mechanisms.

Defect project↗

Adaptive mesh refinement for steady flows in Nek5000

Adaptive mesh refinement is performed in the framework of the spectral element method augmented by approaches to error estimation and control. The h-refinement technique is used for adapting the mesh, where selected grid elements are split by a quadtree (2D) or octree (3D) structure. Continuity between parent-child elements is enforced by high-order interpolation of the solution across the common faces. Parallel mesh partitioning and grid management respectively, are taken care of by the external libraries ParMETIS and p4est. Two methods are considered for estimating and controlling the error of the solution. The first error estimate is local and based on the spectral properties of the solution on each element. This method gives a local measure of the L-2-norm of the solution over the entire computational domain. The second error estimate uses the dual-weighted residuals method - it is based on and takes into account both the local properties of the solution and the global dependence of the error in the solution via an adjoint problem. The objective of this second approach is to optimize the computation of a given functional of physical interest. The simulations are performed by using the code Nek5000 and three steady-state test cases are studied: a two-dimensional lid-driven cavity at Re = 7, 500, a two-dimensional flow past a cylinder at Re = 40, and a three-dimensional lid-driven cavity at Re = 2,000 with a moving lid tilted by an angle of 30 degrees. Finally, the efficiency of both error estimators is compared in terms of refinement patterns and accuracy on the functional of interest. In the case of the adjoint error estimators, the trend on the error of the functional is shown to be correctly represented up to a multiplicative constant.

42 ENGINEERING↗

Investigating the Accuracy of Water Models through the Van Hove Correlation Function

In this study, we present molecular-simulation-based calculations of the Van Hove correlation function (VHF) of water using multiple modeling approaches: classical molecular dynamics with simple three-site nonpolarizable models, with a polarizable model, and with a reactive force field; density functional tight-binding molecular dynamics; and ab initio molecular dynamics. Due to the many orders of magnitude difference in the computational cost of these approaches, we investigate how small and short the simulations can be while still yielding sufficiently accurate and interpretable results for the VHF. We investigate the accuracy of the different models by comparing them to recently published inelastic X-ray scattering measurements of the VHF. We find that all of the models exhibit qualitative agreement with the experiments, and in some models and for some properties, the agreement is quantitative. This work lays the foundation for future simulation approaches to calculating the VHF for aqueous solutions in bulk and under nanoconfinement.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Poplar lignin structural changes during extraction in γ-valerolactone (GVL)

In this paper, we describe an approach for producing both high quality and high quantity of lignin through studying the structural change of lignin during treatment of poplar wood in γ-valerolactone (GVL) for a range of temperatures (from 80 to 120 °C) and reaction time at temperature (from 1 to 24 h). Throughout the study, various techniques, including nuclear magnetic resonance (NMR) spectroscopies (solution- and gel-state 1 H –13 C 2D HSQC and 31 P) and gel-permeation chromatography (GPC) were applied to characterize the lignin structures. As the GVL-extracted lignin yield increases, the level of β-ether units decreases and the level of condensation products increases. The β-ether content, the aliphatic hydroxyl group content, and the molecular weight of the GVL-extracted lignin fractions were close to the poplar lignin from other preparation methods (e.g., enzyme lignin). A two-step hydrolytic process (120 °C, 2 × 15 min) gave a higher lignin yield (56.5% vs. 54.8%) with three times higher β-ether content (31.9% vs. 10.6%) than lignin extracted from a single-step process at 120 °C for 1 h. The results demonstrate that multiple-step cycling of cosolvent-assisted hydrolysis can help preserve more of the virgin ether-bond structures of GVL-extracted poplar lignin. Such a strategy can also be applied to a fully continuous-flow reactor system in future research to further improve both the productivity and quality of GVL-extracted lignin.

2D HSQC NMR↗

Mass generation in an Abelian gauge theory with multiple scalar fields and no tree-level dimensionful couplings

We study the Abelian Higgs model with multiple scalar fields, but without mass terms. Solving the model nonperturbatively order-by-order in the number of scalar fields, we find that radiative corrections generate masses for the scalar and gauge boson, without spontaneous symmetry breaking. The mass scales are set by the Λ -parameter of the electroweak running coupling, thereby naturally avoiding the hierarchy problem. No part of our calculation employs a weak-coupling expansion, and we find that the perturbative vacuum is metastable, and hence must decay to the stable nonperturbative vacuum of the theory, which we identify. Although the field content of our Lagrangian is standard, our results predict the existence of two heavy scalar resonances in addition to the Higgs. We believe that these predicted resonances will ultimately allow experimentalists to discriminate between our method and standard solutions of the Higgs model. Published by the American Physical Society 2024

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Multimodal sensor fusion framework for residential building occupancy detection

For several years now, smart building energy systems have been a research area of intensive activity. In light of the increasing need for sustainable buildings and energy systems, this trend motivates an increasing need for a solution to reduce carbon dioxide emissions and improve energy efficiency. This work proposes a high-performing and transferable occupancy detection framework that combines sensor data from different data modalities, including time series environmental data (temperature, humidity, and illuminance), image data, and acoustic energy data using ensemble method. To draw out the best prediction performance in each modality, the proposed framework was developed, including various models that were designed to learn the occupancy patterns reflected in the physical data streams. To tackle the time series environmental data, we designed two variants of an occupancy detection spatiotemporal pattern network (Occ-STPN) that performs both feature level and decision level fusion, respectively. We also propose a new metric; the fading memory mean square error (FMMSE), that provides a fair evaluation and penalization of delayed occupancy predictions. Multiple open-sourced datasets, including the Electricity Consumption and Occupancy and the University of California, Irvine's (UCI) building occupancy detection dataset, along with our own real data collected from six different houses, were used to validate the algorithms' performance. The experimental results presented herein break down the performance for each sensing modality, and a detailed analysis of the performance is also discussed.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Hematite Crystallization from a Two-Line Ferrihydrite Suspension

Rational design and synthesis of materials, determination of environmental conditions at the time of mineral formation, and definition of mechanisms in biomineralizing systems all require an understanding of the effect of multiple factors on modulating crystallization pathways. In this study, we investigate the influence of temperature, oxalate additive, aging time, and addition of seed crystals on hematite (α-Fe 2 O 3 , Hm) crystallization from a two-line ferrihydrite (Fe 2 O 3 ·xH 2 O, Fh) suspension. We also investigate the effect of temperature on the aging of spindle-shaped Hm mesocrystals, which we synthesize through the addition of sodium oxalate. The results show that Hm mesocrystals form in a temperature window of 45 °C-130 °C. Temperatures ≥ 140 °C favor formation of rhombohedral Hm, suggesting classical monomer-by-monomer growth dominates, whereas crystallization by particle attachment (CPA) is dominant between 45 and 90 °C, while the two processes compete in the intermediate temperature range. Aging of mesocrystals in the original solution at 90 °C or 180 °C leads to a slow morphological evolution towards rhombohedral crystals due to Ostwald ripening. Then, by utilizing rhombohedral Hm and rod-shaped goethite as substrates on which to assemble the mesocrystals, we demonstrate formation of complex heterogeneous structures.

36 MATERIALS SCIENCE↗

Evaluation of Hydrogen Production Feasibility for a Light Water Reactor in the Midwest

Increased electricity production from renewable energy resources coupled with low natural gas prices has caused existing light-water reactor (LWRs) to experience ever diminishing returns from the electricity market. Via partnership among Idaho National Laboratory (INL), The National Renewable Energy Laboratory (NREL), Argonne National Laboratory (ANL), Exelon, and Fuel Cell Energy a techno-economic analysis on the viability of retrofitting existing pressurized water reactors (PWRs) to produce hydrogen (H2) via high temperature steam electrolysis (HTSE) has been conducted. Such integration would allow nuclear facilities to expand into additional markets that may be more profitable in the long-term. To accommodate such an integration, a detailed analysis of HTSE process operation, requirements, and flexibility was conducted. Technical analysis includes proposed nuclear system control scheme modifications to allow dynamic operation of the HTSE via both thermal and electrical connection to the nuclear plant. High fidelity Modelica simulations showcase the viability of such control schemes. However, due to limited knowledge of solid oxide fuel cell (SOFC) stack degradation due to thermal gradients; thermal cycling of the HTSE was not included. Therefore, the control schemes proposed are only utilized to re-distribute steam at startup and only the portion of electricity utilized in the electrolyzers is cycled. From the detailed analysis of the nuclear integration and the HTSE process design, a comprehensive cost estimation was conducted in the APEA and H2A models to elucidate capital and operational costs associated with the production, compression, and distribution of hydrogen from a nuclear facility. Alongside this costing analysis, market analyses were conducted by NREL and ANL on the electric and hydrogen markets respectively in the PJM interconnect. Utilizing the electricity data market projections in the PJM interconnect from NREL and hydrogen demand/pricing projections from ANL a five variable sweep over component capacities, discount rates, and hydrogen pricing was completed using the stochastic framework RAVEN (Risk Analysis Virtual ENVironment) through its resource dispatch plugin HERON (Heuristic Energy Resource Optimization Network). Each combination of variables was evaluated stochastically four times over a seventeen year timespan from 2026-2042 (inclusive) to determine the most economically advantageous solution. Following the five variable sweep an optimization was conducted about the best sweep point to determine optimal component sizing and setpoints. Results suggest positive gain is achievable at all projected hydrogen market pricing levels and at all discount rates. However, exact component sizing and net returns vary based on these values and if incorrect sizing is selected; major net losses can occur. The optimal result occurred with set points as follows: high hydrogen prices, the largest possible HTSE unit in the sweep set at 7.47 kg/sec [645.4 tpd], a contractual hydrogen market agreement 7.29 kg/sec [629.8 tpd], and a hydrogen storage size 115,188 kg. The analysis suggested that with a discount rate of 8%, a ΔNPV = 1.2 billion over the seventeen year span can be achieved. The results illuminate that by operating in multiple markets the nuclear facility is capable of avoiding sale of electricity during times of low electricity market pricing, while maintaining the ability to capitalize on the high electricity market pricing. It should be noted that the analysis conducted in this report is a differential cash flow analysis and as such does not present profit levels. Instead it highlights the net benefit between building and competing in the hydrogen market utilizing nuclear facilities and conducting business as usual in the electricity markets. Additionally, results presented in this report exhibit conservatism due to four key assumptions: Given the limited knowledge on SOFC stack degradation due to thermal gradients the high temperature steam electrolysis plant is not allowed to thermally cycle. This limitation decreases electricity generation capacity in the nuclear plant, reducing capacity payments and the maximum output to the electrical grid. This analysis considers building a separate hydrogen pipeline for use in the nuclear facility. Research is currently being conducted to determine if existing natural gas pipelines can accommodate direct hydrogen injection. If hydrogen can be integrated into existing natural gas pipelines then a capital savings of ~$19,000,000 per kg/sec [1 kg/sec = 86.4 tpd] of installed HTSE capacity could be realized. Fast transients in the electric grid are typically served by flywheels and electric batteries. With electrolysis only operation the nuclear plant can flex its electricity just as quickly. However, for this analysis, the ancillary services market has been neglected. Should the nuclear plant have the ability to operate in the ancillary services market during periods when it is producing hydrogen, an additional substantial income stream that would increase overall system profitability could be considered. Subsidies for non-emitting generation technologies are not introduced in the cash flow analysis, but instead are completed assuming zero subsidies. Profitability is based solely on electricity pricing. Electric pricing is assumed to never go negative. Instead, it is assumed overall system curtailment by the Independent System Operator (ISO) will occur in such a manner that pricing remains at or above zero. This assumption inflates the “business as usual” scenario, thus decreasing the ΔNPV calculated. If negative pricing scenarios continue to occur as they do today, one would expect a further increase in ΔNPV. Overall, results advocate that, through market diversification, nuclear power plants have the potential to substantially increase current profit margins, increase market penetration, and ultimately solidify their place as a mainstay in energy production.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

22 GeV CEBAF with Novel Fixed Field Alternating Gradient Design

Extending the energy reach of CEBAF up to 22 GeV within the existing tunnel is being explored. Proposed energy upgrade can be achieved by increasing the number of recirculations, while using the existing CEBAF SRF cavity system. Presented scheme is based on an exciting new approach to acceleratie electrons efficiently with multiple passes in a single FFA beam line. Encouraged by recent success of the CBETA Test Accelerator, a proposal was formulated raise CEBAF energy by replacing the highest-energy arcs with Fixed Field Alternating Gradient (FFA) arcs. The new pair of arcs configured with FFA lattice would support simultaneous transport of additional 6 passes with energies spanning a factor of two, using the non-scaling FFA principle implemented with Halbach-derived permanent magnets - a novel magnet technology that significantly saves energy and lowers operating costs. One of the challenges of the multi-pass (11) linac optics is to provide uniform focusing in a vast range of energies, using fixed field lattice. Here, we propose a triplet lattice scaled up with increasing momentum along the linac. This would provide a stable periodic solution covering energy ratio of 1:33. The current CEBAF configured with a 123 MeV injector, makes optical matching in the first linac virtually impossible due to extremely high energy span ratio (1:175). Therefore, we envision replacement of the current injector with a 650 MeV 3-pass recirculating injector based on the existing LERF facility. Finally, the 22 GeV CEBAF would promise to deliver in 10-passes a beam with normalized emittance of 80 mm·mrad and with a relative energy spread of 1.5 × 10-3. Further recirculation beyond 22 GeV is limited by large, 974 MeV per electron, energy loss due to synchrotron radiation.

Bogacz, Slawomir↗

Structural and genetic convergence of HIV-1 neutralizing antibodies in vaccinated non-human primates

A primary goal of HIV-1 vaccine development is the consistent elicitation of protective, neutralizing antibodies. While highly similar neutralizing antibodies (nAbs) have been isolated from multiple HIV-infected individuals, it is unclear whether vaccination can consistently elicit highly similar nAbs in genetically diverse primates. Here, we show in three outbred rhesus macaques that immunization with Env elicits a genotypically and phenotypically conserved nAb response. From these vaccinated macaques, we isolated four antibody lineages that had commonalities in immunoglobulin variable, diversity, and joining gene segment usage. Atomic-level structures of the antigen binding fragments of the two most similar antibodies showed nearly identical paratopes. The Env binding modes of each of the four vaccine-induced nAbs were distinct from previously known monoclonal HIV-1 neutralizing antibodies, but were nearly identical to each other. The similarities of these antibodies show that the immune system in outbred primates can respond to HIV-1 Env vaccination with a similar structural and genotypic solution for recognizing a particular neutralizing epitope. These results support rational vaccine design for HIV-1 that aims to reproducibly elicit, in genetically diverse primates, nAbs with specific paratope structures capable of binding conserved epitopes.

59 BASIC BIOLOGICAL SCIENCES↗

Hindsight logging for model training

In modern Machine Learning, model training is an iterative, experimental process that can consume enormous computation resources and developer time. To aid in that process, experienced model developers log and visualize program variables during training runs. Exhaustive logging of all variables is infeasible, so developers are left to choose between slowing down training via extensive conservative logging, or letting training run fast via minimalist optimistic logging that may omit key information. As a compromise, optimistic logging can be accompanied by program checkpoints; this allows developers to add log statements post-hoc, and "replay" desired log statements from checkpoint---a process we refer to as hindsight logging. Unfortunately, hindsight logging raises tricky problems in data management and software engineering. Done poorly, hindsight logging can waste resources and generate technical debt embodied in multiple variants of training code. In this paper, we present methodologies for efficient and effective logging practices for model training, with a focus on techniques for hindsight logging. Our goal is for experienced model developers to learn and adopt these practices. To make this easier, we provide an open-source suite of tools for Fast Low-Overhead Recovery (flor) that embodies our design across three tasks: (i) efficient background logging in Python, (ii) adaptive periodic checkpointing, and (iii) an instrumentation library that codifies hindsight logging for efficient and automatic record-replay of model-training. Model developers can use each flor tool separately as they see fit, or they can use flor in hands-free mode, entrusting it to instrument their code end-to-end for efficient record-replay. Our solutions leverage techniques from physiological transaction logs and recovery in database systems. Evaluations on modern ML benchmarks demonstrate that flor can produce fast checkpointing with small user-specifiable overheads (e.g. 7%), and still provide hindsight log replay times orders of magnitude faster than restarting training from scratch.

Computer Science↗

Applying the Aboveground-Belowground Interaction Concept in Agriculture: Spatio-Temporal Scales Matter

Interactions between aboveground and belowground organisms are important drivers of plant growth and performance in natural ecosystems. Making practical use of such above-belowground biotic interactions offers important opportunities for enhancing the sustainability of agriculture, as it could favor crop growth, nutrient supply, and defense against biotic and abiotic stresses. However, the operation of above- and belowground organisms at different spatial and temporal scales provides important challenges for application in agriculture. Aboveground organisms, such as herbivores and pollinators, operate at spatial scales that exceed individual fields and are highly variable in abundance within growing seasons. In contrast, pathogenic, symbiotic, and decomposer soil biota operate at more localized spatial scales from individual plants to patches of square meters, however, they generate legacy effects on plant performance that may last from single to multiple years. The challenge is to promote pollinators and suppress pests at the landscape and field scale, while creating positive legacy effects of local plant-soil interactions for next generations of plants. Here, we explore the possibilities to improve utilization of above-belowground interactions in agro-ecosystems by considering spatio-temporal scales at which aboveground and belowground organisms operate. We identified that successful integration of above-belowground biotic interactions initially requires developing crop rotations and intercropping systems that create positive local soil legacy effects for neighboring as well subsequent crops. These configurations may then be used as building blocks to design landscapes that accommodate beneficial aboveground communities with respect to their required resources. For successful adoption of above-belowground interactions in agriculture there is a need for context-specific solutions, as well as sound socio-economic embedding.

54 ENVIRONMENTAL SCIENCES↗