WGISS-58 Earthdata Cloud Pain Points
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Doug Newman↗
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PhytoOracle: Scalable, modular phenomics data processing pipelines
As phenomics data volume and dimensionality increase due to advancements in sensor technology, there is an urgent need to develop and implement scalable data processing pipelines. Current phenomics data processing pipelines lack modularity, extensibility, and processing distribution across sensor modalities and phenotyping platforms. To address these challenges, we developed PhytoOracle (PO), a suite of modular, scalable pipelines for processing large volumes of field phenomics RGB, thermal, PSII chlorophyll fluorescence 2D images, and 3D point clouds. PhytoOracle aims to ( i ) improve data processing efficiency; ( ii ) provide an extensible, reproducible computing framework; and ( iii ) enable data fusion of multi-modal phenomics data. PhytoOracle integrates open-source distributed computing frameworks for parallel processing on high-performance computing, cloud, and local computing environments. Each pipeline component is available as a standalone container, providing transferability, extensibility, and reproducibility. The PO pipeline extracts and associates individual plant traits across sensor modalities and collection time points, representing a unique multi-system approach to addressing the genotype-phenotype gap. To date, PO supports lettuce and sorghum phenotypic trait extraction, with a goal of widening the range of supported species in the future. At the maximum number of cores tested in this study (1,024 cores), PO processing times were: 235 minutes for 9,270 RGB images (140.7 GB), 235 minutes for 9,270 thermal images (5.4 GB), and 13 minutes for 39,678 PSII images (86.2 GB). These processing times represent end-to-end processing, from raw data to fully processed numerical phenotypic trait data. Repeatability values of 0.39-0.95 (bounding area), 0.81-0.95 (axis-aligned bounding volume), 0.79-0.94 (oriented bounding volume), 0.83-0.95 (plant height), and 0.81-0.95 (number of points) were observed in Field Scanalyzer data. We also show the ability of PO to process drone data with a repeatability of 0.55-0.95 (bounding area).
59 BASIC BIOLOGICAL SCIENCES↗
Preliminary Findings of Inflight Icing Field Test to Support Icing Remote Sensing Technology Assessment
NASA and the National Center for Atmospheric Research have developed an icing remote sensing technology that has demonstrated skill at detecting and classifying icing hazards in a vertical column above an instrumented ground station. This technology has recently been extended to provide volumetric coverage surrounding an airport. Building on the existing vertical pointing system, the new method for providing volumetric coverage will utilize a vertical pointing cloud radar, a multifrequency microwave radiometer with azimuth and elevation pointing, and a NEXRAD radar. The new terminal area icing remote sensing system processes the data streams from these instruments to derive temperature, liquid water content, and cloud droplet size for each examined point in space. These data are then combined to ultimately provide icing hazard classification along defined approach paths into an airport.
remote sensors↗
Assessment of BQ-9000 Biodiesel Properties for 2020 (CRADA CRD-15-593)
Biodiesel producers in the United States and Canada can voluntarily participate in the industry's BQ-9000 quality assurance program. This is the fourth in a series of reports documenting biodiesel quality from participating producers. Participants in the BQ-9000 program were requested to voluntarily provide data to a third-party team. This team anonymized and randomized the data prior to providing to the National Renewable Energy Laboratory (NREL) for analysis and reporting. The critical quality parameters analyzed are: sodium and potassium, calcium and magnesium, phosphorus, flash point and alcohol control, water and sediment, cloud point, acid number, free and total glycerin, monoglycerides, sulfur, oxidation stability, and cold soak filterability test (CSFT). The statistical analysis for these parameters is presented in Table ES-1.
09 BIOMASS FUELS↗
Assessment of BQ-9000 Biodiesel Properties for 2021
This is the fifth in a series of reports documenting the quality of biodiesel from U.S. and Canadian-based producers that participate in the BQ-9000 program, the biodiesel industry voluntary quality assurance program. Participants agreed to provide monthly data on critical quality parameters for calendar year 2021. The quality data was provided to a team of experts, who removed any identifying company information and provided anonymized and randomized data to the National Renewable Energy Laboratory (NREL) for statistical analysis. The critical quality parameters analyzed were: sodium and potassium (Na+K); calcium and magnesium (Ca+Mg); phosphorus (P); flash point and alcohol control; water and sediment; cloud point; acid number; free and total glycerin; monoglycerides; sulfur; oxidation stability; and cold soak filterability test (CSFT). The data was not weighted for production volume.
09 BIOMASS FUELS↗
Methods for Mapping of Surface Charge Density on Arbitrary Dielectric Objects
A system to map surface charge densities on dielectric objects – e.g. PTFE, PMMA, and PA6 – is described to study maximum surface charge limits discharge and decay characteristics. Two electromechanical movements are used to achieve these goals: a three-axis robotic arm with an electrostatic probe and a three-axis auxiliary movement fitted with a current viewing resistor and laser displacement sensor. Dielectric objects no larger than a cylinder of eight-inch diameter and twelve inches in height are analyzed to create surface point clouds and generate a set of scan points. The arbitrary object is positioned upon a rotational axis with a laser displacement sensor oriented radially towards the rotational axis of the platform to determine the object’s physical limits.
46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
EGS Collab Testbed 2: Laser Scanned 4100 L Drift Map
The EGS Collab project is evaluating a site for Experiment 2 (hydraulic fracturing/shearing) at a depth of 1.25 km in the Sanford Underground Research Facility (SURF) on the 4100 Level. Two early test holes were drilled in an alcove (formerly known as Battery Charging Station) near Yates Shaft. Recently, we conducted a laser survey around the Testbed 2 to capture the details of the drift. This submission package includes the laser scanned drift map around the Testbed 2. The drift map data are presented in AutoCAD (*dxf), Leapfrog mesh (*.msh), and point cloud (*.csv) file formats. Note: The coordinate system used is local Homestake Mine Coordinate (HMC) system from an old gold mine that was in operation for over 100 years.
15 GEOTHERMAL ENERGY↗
Analysis of 2015 Winter In-Flight Icing Case Studies with Ground-Based Remote Sensing Systems Compared to In-Situ SLW Sondes
National Aeronautics and Space Administration (NASA) and the National Center for Atmospheric Research (NCAR) have developed an icing remote sensing technology that has demonstrated skill at detecting and classifying icing hazards in a vertical column above an instrumented ground station. This technology has recently been extended to provide volumetric coverage surrounding an airport. Building on the existing vertical pointing system, the new method for providing volumetric coverage utilizes a vertical pointing cloud radar, a multi-frequency microwave radiometer with azimuth and elevation pointing, and a NEXRAD radar. The new terminal area icing remote sensing system processes the data streams from these instruments to derive temperature, liquid water content, and cloud droplet size for each examined point in space. These data are then combined to ultimately provide icing hazard classification along defined approach paths into an airport. To date, statistical comparisons of the vertical profiling technology have been made to Pilot Reports and Icing Forecast Products. With the extension into relatively large area coverage and the output of microphysical properties in addition to icing severity, the use of these comparators is not appropriate and a more rigorous assessment is required. NASA conducted a field campaign during the early months of 2015 to develop a database to enable the assessment of the new terminal area icing remote sensing system and further refinement of terminal area icing weather information technologies in general. In addition to the ground-based remote sensors listed earlier, in-situ icing environment measurements by weather balloons were performed to produce a comprehensive comparison database. Balloon data gathered consisted of temperature, humidity, pressure, super-cooled liquid water content, and 3-D position with time. Comparison data plots of weather balloon and remote measurements, weather balloon flight paths, bulk comparisons of integrated liquid water content and icing cloud extent agreement, and terminal-area hazard displays are presented. Discussions of agreement quality and paths for future development are also included.
aviation meteorology↗
Aerial and Processed Model Data Representing As-built Conditions in Coastal Port Arthur, Texas in May 2025
This dataset was collected by the Co-Design Team of the Southeast Texas Urban Integrated Field Lab, a research initiative led by the University of Texas at Austin and funded by the U.S. Department of Energy. The broader project focuses on developing climate-resilient design solutions for the Beaumont–Port Arthur region, with more information available at www.setx-uifl.org. Our team conducted aerial surveys of the Port Arthur coastal neighborhood in May 2025, before the start of construction scheduled for Summer 2026. These pre-construction datasets are designed to facilitate comparative analyses, including pre- and post-construction assessments and simulated inundation scenario evaluations. Aerial images were captured using DroneDeploy autonomous flight systems, with imagery processed through the DroneDeploy engine. All original aerial photographs are provided in JPG format and organized in zipped folders by area. The processed data package includes: 3D surface models Orthomosaics Geospatial and topographic mappings Point clouds For guidance on file contents, structure, and recommended usage, please refer to the included README file.
2D mapping↗
Enhancing Docking Accuracy with PECAN2, a 3D Atomic Neural Network Trained without Co-Complex Crystal Structures
Decades of drug development research have explored a vast chemical space for highly active compounds. The exponential growth of virtual libraries enables easy access to billions of synthesizable molecules. Computational modeling, particularly molecular docking, utilizes physics-based calculations to prioritize molecules for synthesis and testing. Nevertheless, the molecular docking process often yields docking poses with favorable scores that prove to be inaccurate with experimental testing. To address these issues, several approaches using machine learning (ML) have been proposed to filter incorrect poses based on the crystal structures. However, most of the methods are limited by the availability of structure data. Here, we propose a new pose classification approach, PECAN2 (Pose Classification with 3D Atomic Network 2), without the need for crystal structures, based on a 3D atomic neural network with Point Cloud Network (PCN). The new approach uses the correlation between docking scores and experimental data to assign labels, instead of relying on the crystal structures. We validate the proposed classifier on multiple datasets including human mu, delta, and kappa opioid receptors and SARS-CoV-2 Mpro. Our results demonstrate that leveraging the correlation between docking scores and experimental data alone enhances molecular docking performance by filtering out false positives and false negatives.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
GeoDAWN West Central Nevada EarthMRI Data
This submission includes both the original product resolution (OPR) and LiDAR point cloud (LPC) LiDAR data collected as part of GeoDAWN: Geoscience Data Acquisition for Western Nevada. The USGS Earth Mapping Resources Initiative (EarthMRI) and USGS 3D Elevation Program (3DEP), Department of Energy Geothermal Technologies Office, Natural Resources Conservation Services, and Bureau of Land Management have partnered to conduct airborne geophysical and 3DEP lidar surveys over parts of Nevada and California to collect information on undiscovered geothermal, critical mineral, and groundwater resources in the western Great Basin and the Walker Lane region.
15 GEOTHERMAL ENERGY↗
GeoDAWN Northwestern Elko County Nevada EarthMRI Data
This submission includes both the original product resolution (OPR) and LiDAR point cloud (LPC) LiDAR data collected as part of GeoDAWN: Geoscience Data Acquisition for Northwestern Elko County, Nevada. The USGS Earth Mapping Resources Initiative (EarthMRI) and USGS 3D Elevation Program (3DEP), Department of Energy Geothermal Technologies Office, Natural Resources Conservation Services, and Bureau of Land Management have partnered to conduct airborne geophysical and 3DEP lidar surveys over parts of Nevada and California to collect information on undiscovered geothermal, critical mineral, and groundwater resources in the western Great Basin and the Walker Lane region.
15 GEOTHERMAL ENERGY↗
Mapping Vegetation at Species Level with High-Resolution Multispectral and Lidar Data Over a Large Spatial Area: A Case Study with Kudzu
Mapping vegetation species is critical to facilitate related quantitative assessment, and mapping invasive plants is important to enhance monitoring and management activities. Integrating high-resolution multispectral remote-sensing (RS) images and lidar (light detection and ranging) point clouds can provide robust features for vegetation mapping. However, using multiple sources of high-resolution RS data for vegetation mapping on a large spatial scale can be both computationally and sampling intensive. Here, we designed a two-step classification workflow to potentially decrease computational cost and sampling effort and to increase classification accuracy by integrating multispectral and lidar data in order to derive spectral, textural, and structural features for mapping target vegetation species. We used this workflow to classify kudzu, an aggressive invasive vine, in the entire Knox County (1362 km2) of Tennessee (U.S.). Object-based image analysis was conducted in the workflow. The first-step classification used 320 kudzu samples and extensive, coarsely labeled samples (based on national land cover) to generate an overprediction map of kudzu using random forest (RF). For the second step, 350 samples were randomly extracted from the overpredicted kudzu and labeled manually for the final prediction using RF and support vector machine (SVM). Computationally intensive features were only used for the second-step classification. SVM had constantly better accuracy than RF, and the producer’s accuracy, user’s accuracy, and Kappa for the SVM model on kudzu were 0.94, 0.96, and 0.90, respectively. SVM predicted 1010 kudzu patches covering 1.29 km2 in Knox County. We found the sample size of kudzu used for algorithm training impacted the accuracy and number of kudzu predicted. The proposed workflow could also improve sampling efficiency and specificity. Our workflow had much higher accuracy than the traditional method conducted in this research, and could be easily implemented to map kudzu in other regions as well as map other vegetation species.
59 BASIC BIOLOGICAL SCIENCES↗
CoURAGE KAZR b1 Processing: Corrections, Calibrations, and Processing Report
The U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) User Facility supports atmospheric and earth system research through a comprehensive network of fixed and mobile observatories. These facilities provide long-term and intensive campaign-based observations of clouds, aerosols, precipitation, radiation, and meteorological state variables. ARM observations are designed to improve the physical understanding and numerical representation of atmospheric processes in earth system models, with particular emphasis on cloud-radiation interactions and precipitation processes. The Coast-Urban-Rural Atmospheric Gradient Experiment (CoURAGE) deploys one of the ARM Mobile Facilities (AMF) to the Mid-Atlantic region surrounding Baltimore, Maryland, for the period 1 December 2024 through 30 November 2025. This deployment focuses on characterizing atmospheric structure, cloud properties, and precipitation processes across strong land-use and surface heterogeneity gradients associated with urban, rural, and coastal (Chesapeake Bay) environments. The CoURAGE deployment complements the Baltimore Social-Environmental Collaborative (BSEC), a DOE Urban Integrated Field Laboratory (UIFL), by providing high-quality atmospheric observations needed to connect urban surface processes, emissions, and meteorology to cloud and precipitation responses. In addition to the central urban site, ancillary observing sites were deployed to rural Maryland northwest of Baltimore and to an island site in Chesapeake Bay. These measurements further complement a long-term atmospheric observatory operated in Beltsville, Maryland, by Howard University in collaboration with the Maryland Department of the Environment. Together, these assets form a four-node regional atmospheric observatory network representing Baltimore and its three primary surrounding environments—urban, rural, and coastal/bay. This coordinated observational strategy enables investigation of spatial gradients in boundary-layer structure, cloud occurrence, precipitation evolution, and aerosol-cloud interactions across complex surface regimes. Within this network, vertically pointing cloud radars play a critical role by providing continuous, high-resolution measurements of cloud and precipitation vertical structure.
54 ENVIRONMENTAL SCIENCES↗
Vision-based inspection of prefabricated components using camera poses: Addressing inherent limitations of image-based 3D reconstruction
Modular construction can lead to additional cost overruns and delays when a defect is found on the construction site and is not easily repairable. Researchers have developed various methods that use image-based 3D reconstruction for quality assessment, but they have inherent limitations, such as inconsistency and dealing with surfaces with reflectivity and limited visual features. Therefore, this paper presents a vision-based quality assessment method using cameras for prefabricated components by addressing these limitations. Specifically, this paper proposes a novel quality inspection method with sub-millimeter accuracy using cameras focused on leveraging camera poses (as opposed to 3D point clouds that are often not consistent in quality) from the image-based 3D reconstruction. The 3D point estimation by computing triangulation was used for achieving accurate measurement. The proposed method is validated using six different variances and two case studies – an aluminum pipe with a reflective surface and a fabricated concrete column. Furthermore, the results demonstrate the accuracy and effectiveness of the proposed method.
42 ENGINEERING↗
The Kinematic Navigation and Cartography Knapsack (KNaCK) LiDAR System: Overview and Applications.
Improved terrain characterization and navigation sensors and methods are needed to enhance crew safety, ISRU return, and scientific understanding of future landing sites. Specific to the Artemis Program and sustained exploration at the lunar South Pole, extreme low-angle solar illumination conditions pose significant challenges to existing photogrammetry-based robotic navigation. Additionally, a major challenge for navigation on the Moon and other planetary surfaces is the lack of Global Positioning and Navigation Systems (GPS or GNSS). Thus, there is a need for an alternative to image-based navigation that allow for precise and accurate mapping in GPS-denied environments on any planetary body. Here, we describe the Kinematic Navigation and Cartography Knapsack (KNaCK) LiDAR system; a backpack-mounted, mobile navigation and terrain mapping system that uses a velocity-sensing coherent light detection and ranging (LiDAR) system based on a frequency modulated continuous wave (FMCW) technique, contains minimal moving parts, and employs sophisticated positioning algorithms. During a traverse, this instrument emits light pulses to continually scan a scene to build a three-dimensional point cloud representation of topography. A measure of the Doppler-velocity at each of millions of range points sampled per second allows for a 6 degree of freedom (6- DoF) estimate of the sensor’s position and the development of novel position-from-velocity mapping and positioning algorithms for loop-closure in GPS denied environments. Included with paper is the video presentation for the Figure 2: FMCW-LiDAR sensor on Kinematic Navigation and Cartography Knapsack (KNaCK) (Aeva Aeries 1)
M. Zanetti↗
Screening of Potential Biomass-Derived Streams as Fuel Blendstocks for Mixing Controlled Compression Ignition Combustion
Mixing controlled compression ignition or diesel engines are highly efficient and are likely to continue to be the primary means for movement of goods for many years to come. Low-carbon biofuels have the potential to significantly reduce the carbon footprint of diesel combustion and could potentially have advantageous properties for combustion such as high cetane number and reduced engine out particle emissions. In this study, we developed a list of potential biomass-derived diesel blendstocks. An online database of properties and characteristics of these bioblendstocks was populated with data. Fuel properties were determined by measurement, model prediction, or literature review. Screening criteria were developed to determine if a bioblendstock met the basic requirements for handling in the diesel distribution system and use as a blend with conventional diesel. Criteria included cetane number =40, flashpoint =52 degrees C, and boiling point or final boiling point <338 degrees C. Blendstocks needed to be soluble in diesel fuel, have a toxicity no worse than conventional diesel, and not be corrosive. Additionally, cloud point or freezing point below 0 degrees C was required. This screening produced a list of 27 potential bioblendstocks. Of these candidates, 13 were available commercially or could be synthesized by biofuels production researchers and included 11 nominally pure components and two mixtures. These 13 candidates were then subjected to further study based on how they impact fuel properties upon blending. Blend properties included cetane number, lubricity, conductivity, oxidation stability and viscosity. Results indicate that all thirteen candidates can meet the basic requirements for diesel fuel blending and are likely to reduce particle emissions from diesel combustion.
09 BIOMASS FUELS↗
Establishing an Urban Heat Exposure Severity Index for Infrastructure Prioritization in Tempe, Arizona, Using NASA Earth Observations and LiDAR
Located on the banks of the Salt River in the Sonoran Desert, Tempe, Arizona, features a semi-arid climate with summer daily maximum temperatures regularly exceeding 37.8°C. Tempe is also subject to the southwestern monsoon season from July-September and the humidity exacerbates the high temperatures. Furthermore, the rapid urbanization experienced in Tempe has resulted in an intensification of the urban heat island. The summer of 2020 shattered the previous record of days exceeding 43.4°C, leading to higher energy and water costs, lower comfort, and increased risk of heat stroke for residents. Recognizing the impacts of extreme heat, the City of Tempe partnered with the Healthy Urban Environments initiative and NASA DEVELOP to identify census tracts that experience a higher mean land surface temperature than the city average. The NASA DEVELOP team used remotely sensed land surface temperature (LST), normalized difference vegetation index (NDVI), normalized difference built-up index (NDBI), normalized difference water index (NDWI), and albedo data calculated from Aqua Moderate Resolution Imaging Spectroradiometer (MODIS) and Landsat 8 Operational Land Imager (OLI) and Thermal Infrared Sensor (TIRS) instruments from 2015 to 2020 to create heat hazard and exposure maps. LiDAR point cloud data, provided by the United States Geological Survey through Arizona State University’s Map and Geospatial Hub, were used to derive 3D buildings, building footprints, and tree point data for a shading analysis of walking paths, roads, and buildings at the census tract level. In situ meteorological measurements including air temperature and humidity were used to compare the macro-scale temperature measurements. The team worked with the City of Tempe to develop a methodology to process available data and identify areas of highest concern for urban heat effects within the city. With these insights, Tempe, Arizona can better address these issues with data-driven information to make decisions regarding heat mitigation and adaptation efforts.
John Dialesandro↗