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At least 145 records · Page 8
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Climatic controls on soil and saprock nitrogen distribution and persistence in the Sierra Nevada

Nitrogen (N) is an essential nutrient in soil that regulates plant growth, terrestrial sequestration of atmospheric carbon dioxide, and persistence of organic compounds. However, major knowledge gaps remain about how climate change may impact N accumulation and persistence, especially in deep soil and saprock (friable weakly weathered bedrock). Our objective was to understand how climate impacts the accumulation of N in soil and saprock and how climate impacts soil N distribution, persistence, and mechanisms of N persistence. We investigated N concentration in bulk soil and density fractions. We estimated N persistence along a bio-climatic sequence—sites range from a low-elevation oak savannah, mid-elevation pine-oak/mixed-conifer forest, to a high-elevation subalpine forest—in the southern Sierra Nevada in California. A combination of radiocarbon and elemental composition measurements along with a first-order kinetic model was used. The N concentration in the bulk soil and density fractions declined with depth, and there was a relatively greater mineral-associated heavy fraction (HF) N in deeper samples. The cooler/wetter mixed conifer site held 37% of profile N in saprock, which was greater than that of the entire soil profile at the drier/hotter oak savannah. The majority of N in soil, which was in the HF, was not influenced by climate proxies tested. However, both unprotected and occluded fractions of N were strongly influenced by climate. Soil N mean residence time (MRT) showed that drier/hotter climates have a shorter MRT, compared to mid-elevation sites with cooler/wetter climates. The effect of climate on deep saprock N storage might be indirect, primarily through climatic influence on the thickness of saprock. Overall, our findings suggest the mineral-associated HF N pool will not be vulnerable to changes in climate and will continue to contribute to the persistent soil N pool. The amount of topsoil and subsoil unprotected and occluded N can be explained by gross primary productivity and mean annual precipitation indicating that changes in climate can influence N partitioning. N stored in deep soil and saprock may be less vulnerable to climate than N stored in drier/hotter climates with less deeply stored N. It is critical to dig deeper to understand terrestrial ecosystems’ response to climate.

58 GEOSCIENCES↗
DOE OSTI2022

Improving Simulations of Vegetation Dynamics over the Tibetan Plateau: Role of Atmospheric Forcing Data and Spatial Resolution

The efficacy of vegetation dynamics simulations in offline land surface models (LSMs) largely depends on the quality and spatial resolution of meteorological forcing data. In this study, the Princeton Global Meteorological Forcing Data (PMFD) and the high spatial resolution and upscaled China Meteorological Forcing Data (CMFD) were used to drive the Simplified Simple Biosphere model version 4/Top-down Representation of Interactive Foliage and Flora Including Dynamics (SSiB4/TRIFFID) and investigate how meteorological forcing datasets with different spatial resolutions affect simulations over the Tibetan Plateau (TP), a region with complex topography and sparse observations. By comparing the monthly Leaf Area Index (LAI) and Gross Primary Production (GPP) against observations, we found that SSiB4/TRIFFID driven by upscaled CMFD improved the performance in simulating the spatial distributions of LAI and GPP over the TP, reducing RMSEs by 24.3% and 20.5%, respectively. The multi-year averaged GPP decreased from 364.68 gC m –2 yr –1 to 241.21 gC m –2 yr –1 with the percentage bias dropping from 50.2% to –1.7%. When using the high spatial resolution CMFD, the RMSEs of the spatial distributions of LAI and GPP simulations were further reduced by 7.5% and 9.5%, respectively. This study highlights the importance of more realistic and high-resolution forcing data in simulating vegetation growth and carbon exchange between the atmosphere and biosphere over the TP.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Response of Stream Metabolism to Coarse Woody Debris Additions Along a Catchment Disturbance Gradient

We evaluated the ecological effectiveness of an in-stream restoration project involving coarse woody debris (CWD) additions to streams along an upland soil and vegetation disturbance gradient at the Fort Benning Military Installation near Columbus, GA. We examined short-term (immediate effectiveness) and longer-term (sustainability) responses to CWD additions by measuring ecosystem metabolism rates in 8 streams quarterly over a 6-year period, including 3 years before (2001–2003) and 3 years after (2004–2006) CWD additions that were made to half of the streams. Ecosystem respiration (ER) rates in most CWD addition streams increased relative to control streams from spring 2004 through autumn 2005, suggesting heterotrophic bacteria were the initial responders to CWD additions. Gross primary production (GPP) rates remained low (typically < 0.3 g O 2 m -2 d -1 ) but increased in some CWD addition streams relative to control streams in spring 2004 and 2005. The magnitude of ER increases in CWD addition streams during the first two years post-addition increased with catchment disturbance intensity, indicating that more heavily disturbed streams responded most strongly to restorations—an important consideration when targeting future restoration locations. Because restorations did not address actual upland disturbance, continued high erosion rates resulted in 32–77% of the added CWD being buried by year two and a corresponding return of GPP and ER rates to pre-CWD addition levels by year three. If restoration projects do not adequately address the source of catchment disturbances, CWD additions will provide only short-term increases in streambed structure and stability, hydrodynamic complexity, and nutrient and organic matter processing and retention.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Aboveground and belowground contributions to ecosystem respiration in a temperate deciduous forest

In this study, we developed a three-way carbon dioxide (CO 2 ) flux-partitioning algorithm that separates net ecosystem exchange (NEE) into aboveground plant respiration (R above ), belowground root and soil respiration (R below ), and gross primary production (GPP). We applied this algorithm to a coupled dataset of continuous chamber-measured soil respiration and eddy covariance (EC)-measured NEE of CO 2 in an oak-hickory (Quercus-Carya) deciduous broadleaf forest from 2006 to 2015. We found that on annual time scale, R below dominated over R above with the former accounting for 66.9–86.4% and the latter 13.6–33.1%, of the total ecosystem respiration (R eco ). The ratio of R below to R above varied seasonally, ranging from 1.77 to 7.25 in growing season, and 1.02 to 4.57 in non-growing season. The temperature sensitivity (E 0 ) of R below was significantly higher than that of R above , and E 0 of R eco responded differently to air and soil temperature. Over the whole study period, annual mean R above , R below , and GPP were 243, 806, and 1170 g C m –2 , respectively, with annual R eco accounting for 89.6% of GPP, of which 68.8% was lost as R below and 20.8% lost as R above , and leaving only 10% of the carbon fixation in ecosystems. Furthermore, these estimates, however, did not consider potential light inhibition of leaf respiration. If we accept the presence of light inhibition, then the daytime three-way partitioning method would underestimate annual R above by 20.4% whereas the nighttime method would overestimate R above by 23.9% and GPP by 4.7%, compared with estimates accounting for light inhibition in leaves.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Drought-induced decoupling between carbon uptake and tree growth impacts forest carbon turnover time

The ability of forests to withstand, and recover from, acute drought stress is a critical uncertainty regarding the impacts of climate change on the terrestrial carbon (C) cycle, but it is unclear how drought responses scale from individual trees to whole forests. Here, we assembled a dataset of tree-ring chronologies co-located within the footprint of eddy covariance towers across North America and Europe, with the aim of quantifying the sensitivity of tree radial growth versus gross primary productivity (GPP) during and following drought. We found that drought induced a large decoupling across C cycle processes, whereby GPP was relatively resistant to water stress despite large reductions in tree-ring widths. This decoupling also occurred in the year following drought (i.e., a ‘drought legacy effect’), and was similar in magnitude in response to both summer and winter droughts. By modeling whole-forest C turnover time, we show that a radial growth-GPP decoupling has important ramifications for the forest C cycle, especially if the C not used to support radial growth is instead allocated towards pools with short residence times. Furthermore, our results demonstrate that quantifications of drought impacts that rely solely on C uptake are missing this fundamental pathway through which drought alters the forest C cycle and the resulting feedbacks to the climate system.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

What explains the year-to-year variation in growing season timing of boreal black spruce forests?

Amplified climate warming in high latitudes is expected to affect growing season timing of the vast boreal biome. It is unclear whether the presence of permafrost (perennially frozen ground) might have an influence on changes in growing season timing. Here, this study examined how different environmental variables explained, either directly or indirectly, the variation in growing season timing of boreal forest stands with and without permafrost. We expected that environmental variables explaining the variation in growing season timing differed or had different explanatory power depending on permafrost presence or absence. The growing season was delineated from daily gross primary productivity (GPP) time series derived from 40 site-year data of net ecosystem carbon dioxide exchange measured with eddy covariance techniques over five black spruce (Picea mariana [Mill.])-dominated boreal forest stands in North America. In permafrost-free forest stands, a combination of start in canopy ‘green-up’ in spring and the timing of air and soil temperature increasing above freezing explained the start-of-season (SOS GPP ). Results from commonality analysis and structural equation modeling suggest that canopy ‘green-up’ and air temperature directly affected SOS GPP in permafrost-free forest stands. In addition, soil temperature acted as mediator for an indirect effect of air temperature on SOS GPP . In contrast, none of the environmental variables, or their combination, explained the variation in SOS GPP in forest stands with permafrost. The explanatory power of environmental variables was more consistent regarding the end-of-season (EOS GPP ). In both, forest stands with and without permafrost, EOS GPP was directly explained by mean soil water content in the fall and the first day of continuous snowpack formation. A better understanding how environmental variables control SOS GPP and EOS GPP in forest stands with and without permafrost will help to refine parameterizations of the boreal biome in Earth system models.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Causality guided machine learning model on wetland CH 4 emissions across global wetlands

Wetland CH 4 emissions are among the most uncertain components of the global CH 4 budget. The complex nature of wetland CH 4 processes makes it challenging to identify causal relationships for improving our understanding and predictability of CH 4 emissions. In this study, we used the flux measurements of CH 4 from eddy covariance towers (30 sites from 4 wetlands types: bog, fen, marsh, and wet tundra) to construct a causality-constrained machine learning (ML) framework to explain the regulative factors and to capture CH 4 emissions at sub-seasonal scale. We found that soil temperature is the dominant factor for CH 4 emissions in all studied wetland types. Ecosystem respiration (CO 2 ) and gross primary productivity exert controls at bog, fen, and marsh sites with lagged responses of days to weeks. Integrating these asynchronous environmental and biological causal relationships in predictive models significantly improved model performance. More importantly, modeled CH 4 emissions differed by up to a factor of 4 under a +1°C warming scenario when causality constraints were considered. These results highlight the significant role of causality in modeling wetland CH 4 emissions especially under future warming conditions, while traditional data-driven ML models may reproduce observations for the wrong reasons. Our proposed causality-guided model could benefit predictive modeling, large-scale upscaling, data gap-filling, and surrogate modeling of wetland CH 4 emissions within earth system land models.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Remote sensing of seasonal variation of LAI and fAPAR in a deciduous broadleaf forest

Climate change is affecting the phenology of terrestrial ecosystems. In deciduous forests, phenology in leaf area index (LAI) is the primary driver of seasonal variation in the fraction of absorbed photosynthetically active radiation (fAPAR), which drives photosynthesis. Remote sensing has been widely used to estimate LAI and fAPAR. However, while many studies have examined both empirical and model-based relationships among LAI, fAPAR, and spectral vegetation indices (SVI) from remote sensing, few studies have systematically and empirically examined how relationships among these variables change over the growing season. In this study, we examine how and why seasonal-scale covariation differs among time series of remotely sensed SVIs and both LAI and fAPAR based on current understanding and theory. To do this we use newly available remote sensing data sets in combination with time series of in-situ measurements and a canopy radiative transfer model to analyze how seasonal variation in canopy and environmental conditions affect relationships among remotely sensed SVIs, LAI, and fAPAR at a temperate deciduous forest site in central Massachusetts. Our results show that accounting for seasonal variation in canopy shadowing, which is driven by variation in solar zenith angle, improved remote sensing-based estimates of LAI, fAPAR, and daily total APAR. Specifically, we show that the phenology of SVIs is strongly influenced by seasonal variation in near infrared (NIR) reflectance arising from systematic variation in the canopy shadow fraction that is independent of changes in LAI or fAPAR. Therefore, results of this work provide a refined basis for understanding how remote sensing can be used to monitor and model the phenology of LAI, fAPAR, APAR, and gross primary productivity in temperate deciduous forests.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Editorial special issue: Advancing foundational sun-induced chlorophyll fluorescence science

The first research on the possibilities offered by chlorophyll-a fluorescence to track the daily course of CO 2 assimilation by leaves dates back to the last century (Kautsky and Hirsch, 1931). In the second half of the XXth Century, the development of the field of active fluorescence, which relies mainly on the pulse amplitude modulation (PAM) fluorimetry technique, allowed the unraveling of the relationship between the yield of chlorophyll-a fluorescence and photochemistry (linear electron transport), which is modulated by a third process known as non-photochemical quenching (Genty et al., 1989). Since then, active fluorescence has been regularly used in ecophysiology, forestry, and crop sciences to understand the plant response to stress (Schreiber, 2004). Since the beginning of the 2000s, the development of portable field spectrometers allows for measuring passive sun-induced fluorescence (SIF) at strong solar or telluric absorption features, which do not rely on the use of artificial excitation light (e.g., Meroni and Colombo, 2006; Meroni et al., 2009; Perez-Priego et al., 2005). Since then, the field has rapidly evolved, and now fluorescence is measurable with automated field spectrometers in the field (Grossmann et al., 2018; Gu et al., 2019b; Rossini et al., 2010), airborne platforms (Rascher et al., 2015; Zarco-Tejada et al., 2000), and satellites (Guanter et al., 2012; Sun et al., 2018). These advances offer the potential to couple ecosystem-scale measurements of CO 2 fluxes and SIF to probe new aspects related to ecosystem structural impacts on SIF andphotosynthesis processes at different time-scales and on different ecosystems (e.g., Damm et al., 2010; Magney et al., 2019; Porcar-Castell et al., 2021). While SIF has been proven as a good proxy of gross primary productivity (GPP), mainly across large spatial and temporal gradients, a series of studies showed that different factors could confound this relationship, namely different canopy structures (e.g., Dechant et al., 2020; Migliavacca et al., 2017), stress conditions (e.g., Martini et al., 2022; Wieneke et al., 2018; Wohlfahrt et al., 2018), nutritional conditions (Cendrero-Mateo et al., 2015; Martini et al., 2019), species-specific differences (e.g., Van Wittenberghe et al., 2013) and light regimes (e.g., Liu and Liu, 2018). At the same time, the modeling of SIF developed rapidly (Gu et al., 2019a; Han et al., 2022; Han et al., 2021; van der Tol et al., 2014; van der Tol et al., 2009) and with an increasing degree of realism, offering the possibility to retrieve important vegetation parameters from remote sensing (Pacheco-Labrador et al., 2019; Verrelst et al., 2015; Verrelst et al., 2016; Zhang et al., 2014). Excellent and comprehensive reviews of the field are by (Mohammed et al., 2019; Porcar-Castell et al., 2021; Porcar-Castell et al., 2014; Sun et al., 2023a; Sun et al., 2023b). Despite the exponential increase in the number of publications in the field, significant progress is still needed. Here, this special issue aims to report foundational SIF science, including theoretical modeling and measurement-based research that is urgently needed to unleash the full potential of SIF for physiological and ecological applications at scales spanning from leaf to globe. The 14 articles collected in this special issue reported on the following specific aspects: first, technical capabilities enabling spectrally resolved SIF observations and their inter-comparability in space and time; second, theoretical developments in SIF-photosynthesis relationships to correctly interpret the signal and extract mechanistic information on vegetation structure and function; third, evaluation of the potential of SIF to track process beyond photosynthesis, such as transpiration; fourth, large scale-applications of SIF observations; and finally, upscaling fluorescence from leaf to canopy scales.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

SIF-based GPP modeling for evergreen forests considering the seasonal variation in maximum photochemical efficiency

Solar-induced chlorophyll fluorescence (SIF) has shown great potential in estimating gross primary production (GPP). However, their quantitative relationship is not invariant, which undermines the reliability of empirical SIF-based GPP estimation at fine spatiotemporal scales, especially under extreme conditions. In this study, we developed a parsimonious mechanistic model for SIF-based GPP estimation in evergreen needle forests (ENF) by employing the Mechanistic Light Response framework and Eco-Evolutionary theory to describe the light and dark reactions during photosynthesis, respectively. Specifically, we found that considering the seasonal variation in a key parameter of the MLR framework, the maximum photochemical efficiency of photosystem II (Φ PSIImax ), can avoid the GPP overestimation in winter and early spring due to the relatively low environmental sensitivity of SIF. Compared to the estimates from other benchmark models, our GPP estimates were closer to the 1: 1 line and had higher accuracy (average R 2 = 0.86, RMSE=1.99 μmol m -2 s -1 ) across sites. Furthermore, the changes in the relationship between SIF and J (refers to the electron transport rate) contribute a lot to the dynamic SIF–GPP relationship in this study, while the J–GPP relationship is less variant when the temperature drops. Further, the seasonal variation in the SIF–J relationship, especially the reduction in its slope at low temperatures, is found largely explained by the Φ PSIImax . These results indicate the importance of the uncertainty caused by the variation in the SIF–J relationship for SIF-based GPP estimation, and the consideration of changes in Φ PSIImax under extreme conditions (such as severe winter in this study) is crucial for the improvement of GPP estimation via SIF.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Estimating soybean yields from high-temporal-resolution multi-source data using deep learning

Accurate and timely crop yield prediction is crucial for ensuring food security and maintaining stable agricultural markets. In recent years, there has been a surge in interest in leveraging high-temporal-resolution, multi-source data for effective crop growth monitoring and yield estimation. A notable challenge arises from the difficulty in capturing the intricate interactions between variables across different time steps within these high-temporal-resolution time series datasets. This complexity hinders the reliable extraction of yield information from voluminous and often noisy datasets, especially during periods of extreme weather events. Here, in this study, we propose an Attention and Graph Isomorphism Network-enhanced Bi-directional Long Short-Term Memory network (AGB-LSTM) for estimating county-level soybean yield in the United States. This model integrates a diverse set of remote sensing data, including Near-Infrared Reflectance of Vegetation (NIRv), Sun-Induced chlorophyll Fluorescence (SIF), and Gross Primary Productivity (GPP), along with environmental covariates. The AGB-LSTM effectively leverages information related to crop yield from high-temporal-resolution time series data (5-days), achieving an accuracy of R²= 0.67 and rRMSE = 14.46%. This approach significantly outperforms traditional machine learning methods such as Random Forest (RF) (R²= 0.52, rRMSE = 17.36%) and Bi-LSTM (R²= 0.58, rRMSE = 16.17%). Sensitivity experiments with different time steps and ranges demonstrated that our model could accurately and stably predict yields 1 to 2 months before harvest. Moreover, data with a finer temporal resolution consistently improved prediction performance, resulting in an approximately 20% increase in and an approximately 20% decrease in rRMSE compared to using monthly composites. We also evaluated the robustness of the model under extreme climate events and observed strong performance (R²= 0.50, rRMSE = 21.32%). Finally, yield mapping for major soybean-producing regions in North America in 2023 revealed spatial patterns that closely matched USDA yield reports. Our findings suggest that the AGB-LSTM model is a promising and effective method for estimating yield and has notable potential for global crop yield forecasting.

Deep learning↗
DOE OSTI2025

Linking groundwater variability to ecosystem carbon and water use efficiencies across India

Carbon use efficiency (CUE) and water use efficiency (WUE) are important indicators of ecosystem health, reflecting the balance between carbon uptake and allocation, and the relationship between carbon assimilation and water loss. Although India shows large spatiotemporal variation in water table depth (WTD), and increasing groundwater stress, the influence of WTD on ecosystem functioning remains underexplored. This study uses satellite-based, modeled, and in-situ datasets to (1) quantify variations in CUE and WUE under shallow (SWTD) and deep (DWTD) WTD conditions across six homogeneous meteorological regions (HMRs), (2) evaluate temporal roles of gross primary productivity (GPP), net primary productivity (NPP), and evapotranspiration (ET) in driving these efficiencies, and (3) examine temporal responses to WTD shifts. SWTD regions generally showed 12 to 18 % higher GPP, 10 to 15 % higher NPP, and 10 to 20 % higher ET than DWTD zones, especially in semi-arid croplands and forests, leading to 8 to 12 % higher CUE and WUE. However, in humid and heavily irrigated regions such as northeastern and hilly India, CUE was up to 10 % higher in DWTD zones, possibly due to reduced respiration and better soil aeration compared to SWTD areas affected by waterlogging. During the Kharif (wet) season, DWTD croplands in humid zones had higher efficiencies, while in the Rabi (dry) season, SWTD croplands in northern India benefited from irrigation and cooler temperatures. These results highlight strong influence of WTD on carbon and water use processes and support the need for region-specific groundwater strategies.

Carbon use efficiency↗
DOE OSTI2020

A radiative transfer model for solar induced fluorescence using spectral invariants theory

Solar Induced chlorophyll Fluorescence (SIF) shows promise as an approach for estimating gross primary production (GPP) remotely. However, sun-target-sensor geometry and within-canopy absorption of SIF can alter the relationship between measured SIF and GPP, because sensors can only retrieve some unknown fraction of the total emitted SIF. Radiative transfer models that allow for variation in canopy structure and sensor angles are therefore needed to properly interpret SIF measurements. Spectral invariants allow decoupling of the wavelength-independent canopy structure and the wavelength-dependent leaf and soil spectrum in the radiative transfer process. Here we develop a simple analytical Fluorescence Radiative Transfer model based on Escape and Recollision probability (FluorRTER) to investigate the impact of canopy structure and sun-target-sensor geometry on SIF emissions. SIF simulations using the FluorRTER model agreed well the one-dimensional Soil-Canopy Observation of Photochemistry and Energy balance (SCOPE) model and the three-dimensional Fluorescence model with Weighted Photon Spread (FluorWPS) model. The fractional vegetation cover (FVC) and clumping effect have a large influence the SIF emission of 3D discontinuous canopies. For a moderate solar zenith angle (30°) and a clumped canopy (FVC?=?0.6), the difference between the directional observed SIF of a 3D discontinuous canopy and a 1D homogeneous canopy was as large as 43.2% and 38.4% for Photosystem I?+?II fluorescence at 685?nm and at 740?nm, respectively. By bridging the gap between observed SIF and total emitted SIF over 3D heterogeneous vegetation canopies, the FluorRTER model can assist with the angular normalization of SIF measurements and enable the more robust interpretation of how variations in SIF from directional and hemispherical in-situ, airborne and satellite observations relate to leaf and whole-canopy physiological processes.

Zeng, Yelu↗
DOE OSTI2023

Generating high-resolution total canopy SIF emission from TROPOMI data: Algorithm and application

Solar-induced chlorophyll fluorescence (SIF) is a rapidly advancing front in modeling global terrestrial gross primary production (GPP). Canopy total SIF emissions (SIF total ) are mechanistically linked to the plant photosynthesis, and can be estimated from satellite observed SIF (SIF obs ) through radiative transfer modeling. However, the current satellite SIF obs and thus SIF total are available only at coarse spatial resolutions from several kilometers to tens of kilometers, inhibiting the application at fine spatial scales. Here, in this work, we proposed an algorithm to generate both global high-resolution SIF total (HSIF total ) and high-resolution SIF obs (HSIF obs ) at 1 km from low-resolution SIF obs (LSIF obs ) from the TROPOspheric Monitoring Instrument (TROPOMI), which has a spatial resolution at nadir of 3.5 km by 5.6–7 km. Our statistical method is based on the law of energy conservation and uses satellite derived fraction of absorbed photosynthetically active radiation, fluorescence efficiency, and the escape probability of fluorescence. We evaluated the accuracy of our HSIF total using the Orbiting Carbon Observatory-2 SIF (R 2 = 0.78). We found that the spatial resolution had clear effects on the relationship between HSIF total and GPP. We also compared HSIF total to 8-day averaged tower GPP from 135 flux sites and found that they were better correlated when HSIF total was averaged over a 1-km radius around the tower than when averaged over a larger radius. Our study provided a unique high-resolution HSIF total product, which will advance the estimation of GPP by extrapolating site-level relationships to the global scale.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

A decreasing carbon allocation to belowground autotrophic respiration in global forest ecosystems

Belowground autotrophic respiration (RAsoil) depends on carbohydrates from photosynthesis flowing to roots and rhizospheres, and is one of the most important but least understood components in forest carbon cycling. Carbon allocation plays an important role in forest carbon cycling and reflects forest adaptation to changing environmental conditions. However, carbon allocation to RAsoil has not been fully examined at the global scale. To fill this knowledge gap, first, the spatio-temporal patterns of RAsoil from 1981 to 2017 were predicted by a Random Forest (RF) algorithm using the most updated Global Soil Respiration Database (v5) with global environmental variables; second, carbon allocation from photosynthesis to RAsoil (CAB), was calculated as the ratio of RAsoil to gross primary production; and its temporal and spatial patterns were assessed in global forest ecosystems. . Globally, mean RAsoil from forests was 8.9 ± 0.08 Pg C yr-1 (mean ± standard deviation) from 1981 to 2017 with strong spatial variabilities. Temporally, RAsoil increased at a rate of 0.0059 Pg C yr-2, paralleling broader soil respiration changes and indicating increasing carbon respired by roots. Mean CAB was 0.243 ± 0.016 and decreased over time. The temporal trend of CAB varied greatly in space, reflecting uneven responses of CAB to environmental changes. This study is the first attempt to predict global CAB and analyze its temporal and spatial patterns. With the linkage of carbon use efficiency, the developed CAB offers an completely independent approach to quantify global aboveground autotropic respiration spatially and temporally, which could provide crucial insights into carbon flux partition and global carbon cycling under climate change.

Tang, Xiaolu↗
DOE OSTI2020

Tracking Seasonal and Interannual Variability in Photosynthetic Downregulation in Response to Water Stress at a Temperate Deciduous Forest

Abstract The understanding and modeling of photosynthetic dynamics affected by climate variability can be highly uncertain. In this paper, we examined a well‐characterized eddy covariance site in a drought‐prone temperate deciduous broadleaf forest combining tower measurements and satellite observations. We find that an increase in spring temperature usually leads to enhanced spring gross primary production (GPP), but a GPP reduction in late growing season due to water limitation. We evaluated how well a coupled fluorescence‐photosynthesis model (SCOPE) and satellite data sets track the interannual and seasonal variations of tower GPP from 2007 to 2016. In SCOPE, a simple stress factor scaling of Vcmax as a linear function of observed predawn leaf water potential ( ψ pd ) shows a good agreement between modeled and measured interannual variations in both GPP and solar‐induced chlorophyll fluorescence (SIF) from the Global Ozone Monitoring Experiment‐2 (GOME‐2). The modeled and satellite‐observed changes in SIF yield are ~30% smaller than corresponding changes in light use efficiency (LUE) under severe stress, for which a common linear SIF to GPP scaling would underestimate the stress reduction in GPP. Overall, GOME‐2 SIF tracks interannual tower GPP variations better than satellite vegetations indices (VIs) representing canopy “greenness.” However, it is still challenging to attribute observed SIF variations unequivocally to greenness or physiological changes due to large GOME‐2 footprint. Higher‐resolution SIF data sets (e.g., TROPOMI) already show the potential to well capture the downregulation of late‐season GPP and could pave the way to better disentangle canopy structural and physiological changes in the future.

He, Liyin↗
DOE OSTI2020

Seasonal Evolution of Canopy Stomatal Conductance for a Prairie and Maize Field in the Midwestern United States from Continuous Carbonyl Sulfide Fluxes

Abstract There are inherent challenges in scaling stomatal conductance (g ) from leaf to canopy particularly over seasonal time scales when species distribution and canopy structure evolve. We address this gap using carbonyl sulfide (OCS) and CO fluxes from a predominantly C3 prairie and C4 maize field in the midwestern United States. The g derived from OCS fluxes captured a transition in the stomatal limitation on gross primary productivity (GPP) through the growing season as well as seasonally persistent g dynamics such as temperature optimum and a positive response of nighttime g to vapor pressure deficit. Near the termination of the prairie growing season, we observed a decrease in the relative OCS to CO flux that we hypothesize emerged from a rising contribution of C4 plants to productivity. The results show how plot‐scale OCS and CO fluxes can be used as a trace gas diagnostic for transitions in the limiting factors for community GPP.

Berkelhammer, M.↗
DOE OSTI2020

Varying Contributions of Drivers to the Relationship Between Canopy Photosynthesis and Far‐Red Sun‐Induced Fluorescence for Two Maize Sites at Different Temporal Scales

Abstract Sun‐induced fluorescence (SIF) has been found to be strongly correlated with gross primary production (GPP) in a quasi‐linear pattern at the scales beyond leaves. However, the causes of the GPP:SIF relationship deviating from a linear pattern remain unclear. In the current study conducted at two maize sites in Nebraska in 2017 summer growing season, we investigated the relationship between GPP and SIF at 760 nm (F 760 ) at two temporal scales and quantified the contributions of incoming photosynthetically active radiation (PAR in ), fraction of absorbed PAR (fPAR), light use efficiency (LUE), and F 760 yield (F 760,y , defined as F 760 /(PAR in ×fPAR)) to GPP and F 760 variabilities to further understand the linearity and deviations in the GPP:F 760 relationship. We found the following: (1) For individual growth stages when canopy structure and chlorophyll content were stable, GPP and F 760 were strongly controlled by PAR in , while LUE and F 760,y had much lower contributions to the GPP:F 760 relationship; during this period, LUE and F 760,y had either a slightly negative or no clear relationship, which explained some deviations in the GPP:SIF relationship. (2) At the seasonal scale, the contribution of LUE to GPP variability as well as the contribution of F 760,y to F 760 variability increased and was comparable to the contribution of PAR in ; the LUE:F 760,y relationship showed a strong linear relationship, which strengthened the linear GPP:F 760 relationship. Both maize sites showed similar patterns. A framework was applied to estimate LUE at individual stages and as a result, significantly improved the GPP estimation, thus enhancing the SIF potential for inferring photosynthesis.

Miao, Guofang↗