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At least 145 records · Page 8

Efficient Distance-based Global Sensitivity Analysis for Terrestrial Ecosystem Modeling

Sensitivity analysis in terrestrial ecosystem modeling is important for understanding controlling processes, guiding model development, and targeting new observations to reduce parameter and prediction uncertainty. Complex and computationally expensive terrestrial ecosystem models (TEM) limit the number of ensemble simulations, requiring sophisticated and efficient methods to analyze sensitivities of multiple model responses to different types of parameter uncertainties. In this study, we propose a distance-based global sensitivity analysis (DGSA) method. DGSA first classifies model response samples into a small set of discrete classes and then calculates the distance between parameter frequency distributions in different classes to measure the parameter sensitivity. The principle is that, if the parameter distribution is the same in each class, then the model response is insensitive to the parameter, while a large difference in the distributions indicates the parameter is influential to the response. Built on this idea, DGSA can be applied to analyze sensitivity of a single and a group of responses to different kinds of parameter uncertainties including continuous, discrete and even stochastic. Besides the main-effect sensitivity from a single parameter, DGSA can also quantify the sensitivity from parameter interactions. Additionally, DGSA is computationally efficient which can use a small number of model evaluations to obtain an accurate and statistically significant result. We applied DGSA to two TEMs, one having eight parameters and three kinds of model responses, and the other having 47 parameters and a long-period response. We demonstrated that DGSA can be used for sensitivity problems with multiple responses and high-dimensional parameters efficiently.

Lu, Dan↗

An Evaluation of Teleconnections Over the United States in an Ensemble of AMIP Simulations with the MERRA-2 Configuration of the GEOS Atmospheric Model

The atmospheric general circulation model that is used in NASA's Modern Era Retrospective Analysis for Research and Applications Version 2 (MERRA-2) is evaluated with respect to the relationship between large-scale teleconnection patterns and daily temperature and precipitation over the United States (US) using a ten-member ensemble of simulations, referred to as M2AMIP. A focus is placed on four teleconnection patterns that are known to influence weather and climate in the US: El Nino Southern Oscillation, the Pacific Decadal Oscillation, the North Atlantic Oscillation, and the Pacific-North American Pattern. The monthly and seasonal indices associated with the patterns are correlated with daily temperature and precipitation statistics including: (i) monthly mean 2 m temperature and precipitation, (ii) the frequency of extreme temperature events at the 90th, 95th, and 99th percentiles, and (iii) the frequency and intensity of extreme precipitation events classified at the 90th, 95th, and 99th percentiles.Correlations obtained with M2AMIP data and thus the strength of teleconnections in the free-running model are evaluated through comparison against corresponding correlations computed from observations and from MERRA-2. Overall, the strongest teleconnections in all datasets occur during the winter and coincide with the largest agreement between the observations, MERRA-2, and M2AMIP. When M2AMIP does capture the correlation seen in observations, there is a tendency for the spatial extent to be exaggerated. The weakest agreement between the data sources, for all teleconnection patterns, is in the correlation with extreme precipitation; however there are discrepancies between the datasets in the number of days with at least 1 mm of precipitation: M2AMIP has too few days with precipitation in the Northwest and the Northern Great Plains and too many days in the Northeast. In JJA, M2AMIP has too few days with precipitation in the western two-thirds of the country and too many days with precipitation along the east coast.

JJA↗

Effects of pH on an IDP conformational ensemble explored by molecular dynamics simulation

The conformational ensemble of intrinsically disordered proteins, such as α-synuclein, are responsible for their function and malfunction. Misfolding of α-synuclein can lead to neurodegenerative diseases, and the ability to study their conformations and those of other intrinsically disordered proteins under varying physiological conditions can be crucial to understanding and preventing pathologies. In contrast to well-folded peptides, a consensus feature of IDPs is their low hydropathy and high charge, which makes their conformations sensitive to pH perturbation. We examine a prominent member of this subset of IDPs, α-synuclein, using a divide-and-conquer scheme that provides enhanced sampling of IDP structural ensembles. We constructed conformational ensembles of α-synuclein under neutral (pH ~ 7) and low (pH ~ 3) pH conditions and compared our results with available information obtained from smFRET, SAXS, and NMR studies. Specifically, α-synuclein has been found to in a more compact state at low pH conditions and the structural changes observed are consistent with those from experiments. We also characterize the conformational and dynamic differences between these ensembles and discussed the implication on promoting pathogenic fibril formation. We find that under low pH conditions, neutralization of negatively charged residues leads to compaction of the C-terminal portion of α-synuclein while internal reorganization allows α-synuclein to maintain its overall end-to-end distance. Here, we also observe different levels of intra-protein interaction between three regions of α-synuclein at varying pH and a shift towards more hydrophilic interactions with decreasing pH.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Enhanced climate reproducibility testing with false discovery rate correction

Simulating the Earth's climate is an important and complex problem, thus climate models are similarly complex, comprised of millions of lines of code. In order to appropriately utilize the latest computational and software infrastructure advancements in Earth system models running on modern hybrid computing architectures to improve their performance, precision, accuracy, or all three; it is important to ensure that model simulations are repeatable and robust. This introduces the need for establishing statistical or non-bit-for-bit reproducibility, since bit-for-bit reproducibility may not always be achievable. Here, we propose a short-simulation ensemble-based test for an atmosphere model to evaluate the null hypothesis that modified model results are statistically equivalent to that of the original model. We implement this test in version 2 of the US Department of Energy's Energy Exascale Earth System Model (E3SM). The test evaluates a standard set of output variables across the two simulation ensembles and uses a false discovery rate correction to account for multiple testing. The false positive rates of the test are examined using re-sampling techniques on large simulation ensembles and are found to be lower than the currently implemented bootstrapping-based testing approach in E3SM. We also evaluate the statistical power of the test using perturbed simulation ensemble suites, each with a progressively larger magnitude of change to a tuning parameter. The new test is generally found to exhibit more statistical power than the current approach, being able to detect smaller changes in parameter values with higher confidence.

Kelleher, Michael E. [Oak Ridge National Laborator↗

Arctic Sea Ice Simulation in the PlioMIP Ensemble

Eight general circulation models have simulated the mid-Pliocene warm period (mid-Pliocene, 3.264 to 3.025 Ma) as part of the Pliocene Modelling Intercomparison Project (PlioMIP). Here, we analyse and compare their simulation of Arctic sea ice for both the pre-industrial period and the mid-Pliocene. Mid-Pliocene sea ice thickness and extent is reduced, and the model spread of extent is more than twice the pre-industrial spread in some summer months. Half of the PlioMIP models simulate ice-free conditions in the mid-Pliocene. This spread amongst the ensemble is in line with the uncertainties amongst proxy reconstructions for mid-Pliocene sea ice extent. Correlations between mid-Pliocene Arctic temperatures and sea ice extents are almost twice as strong as the equivalent correlations for the pre-industrial simulations. The need for more comprehensive sea ice proxy data is highlighted, in order to better compare model performances.

simulation↗

Systematic Validation of Ensemble Cloud-Process Simulations using Polarimetric Radar Observations and Simulator over the NASA Wallops Flight Facility

The BiLateral Operational Storm-Scale Observation and Modeling (BLOSSOM) project was initiated to establish a long-term supersite to improve understanding of cloud physical states and processes as well as to support satellite and climate model programs over the WFF site via a bilateral approach of storm-scale observations and process modeling. This study highlights a noble systematic validation framework of the BLOSSOM ensemble cloud-process simulations through mixed-phase, light-rain, and deep-convective precipitation cases. The framework consists of creating a domain-shifted ensemble of large-scale forcing datasets, and configuring and performing cloud-process simulations with three different bulk microphysics schemes. Validation uses NASA S-band dual-POLarimetric radar (NPOL) observations in the form of statistical composites and skill scores via a polarimetric radar simulator and newly developed CfRad Data tool (CfRAD). While the simulations capture the overall structures of the reflectivity composites, polarimetric signals are still poorly simulated, mainly due to a lack of representation of ice microphysics diversity in shapes, orientation distributions, and their complex mixtures. Despite the limitation, this new ensemble-based validation framework demonstrates that 1) no particular forcing or microphysics scheme outperforms the rest and 2) the skill scores of coarse- and fine-resolution ensemble simulations with different domain-shifted forcing and microphysics schemes are highly correlated with each other with no clear improvement. On the other hand, this suggests that coarse-resolution ensemble simulations are relevant for selecting the best meteorological forcing and microphysics scheme before conducting computationally demanding large eddy simulations (LESs) in support of aircraft and satellite instrument development as well as cloud-precipitation-convection parameterizations.

54 ENVIRONMENTAL SCIENCES↗

Wind Energy Forecasting with the Weather Research and Forecasting Model

This was a collaborative effort between Lawrence Livermore National Security, LLC as manager and operator of Lawrence Livermore National Laboratory (LLNL) and Siemens Energy, Inc. (Siemens) to develop a wind resource forecasting tool. LLNL was to develop an independent high-resolution mesoscale modeling capability forecasting tool that could be implemented in conjunction with existing wind farm control and monitoring software to provide forecasting of wind resources using local observations of winds and temperature. Research with LLNL’s state-of-the-art large-eddy simulation meteorological prediction model, based on the community WRF model and innovative turbulence parameterizations, would improve that model’s applicability to large wind farms offshore and in complex terrain. The modeling capability would include uncertainty quantification. Finally, the application of the modeling tool and existing global climate change predictions would enable the delineation of the likely effects of climate change on wind resources. Siemens was to provide high time resolution hub-height wind speed and other meteorological data streams, including temperature profiles from wind farms, for LLNL to incorporate into the modeling system, to validate and tune this forecasting model for their locations of interest. These data streams would also be used for longer-term studies of correlations of wind resources to climate oscillations to indicate how long-term climate change trends may affect the available wind resource. Siemens would also provide information and observations of turbine wakes for incorporation into the modeling tool. By implementing state-of-the-art turbulence parameterizations into a simulation model and/or ensembles of simulation models, and by integrating real-time hub height wind speed and other meteorological datastreams from wind farms into that model or ensemble of models, LLNL would develop a forecasting tool that could be implemented by Siemens as an add-on to existing wind farm control and monitoring software to provide owners with useful resource forecasting. The desired outcome was that the accuracy level of the output would be sufficient to substantiate power output commitments. The final deliverable for this work would consist of a document outlining the algorithms and software tools that could be integrated into Siemens Wind Park Supervisor.

17 WIND ENERGY↗

Significant impact of forcing uncertainty in a large ensemble of climate model simulations

Forcing due to solar and volcanic variability, on the natural side, and greenhouse gas and aerosol emissions, on the anthropogenic side, are the main inputs to climate models. Reliable climate model simulations of past and future climate change depend crucially upon them. Here we analyze large ensembles of simulations using a comprehensive Earth System Model to quantify uncertainties in global climate change attributable to differences in prescribed forcings. The different forcings considered here are those used in the two most recent phases of the Coupled Model Intercomparison Project (CMIP), namely CMIP5 and CMIP6. We show significant differences in simulated global surface air temperature due to volcanic aerosol forcing in the second half of the 19th century and in the early 21st century. The latter arise from small-to-moderate eruptions incorporated in CMIP6 simulations but not in CMIP5 simulations. We also find significant differences in global surface air temperature and Arctic sea ice area due to anthropogenic aerosol forcing in the second half of the 20th century and early 21st century. These differences are as large as those obtained in different versions of an Earth System Model employing identical forcings. In simulations from 2015 to 2100, we find significant differences in the rates of projected global warming arising from CMIP5 and CMIP6 concentration pathways that differ slightly but are equivalent in terms of their nominal radiative forcing levels in 2100. Our results highlight the influence of assumptions about natural and anthropogenic aerosol loadings on carbon budgets, the likelihood of meeting Paris targets, and the equivalence of future forcing scenarios.

54 ENVIRONMENTAL SCIENCES↗

Kinetic theory of particle-in-cell simulation plasma and the ensemble averaging technique

Abstract We derive the kinetic theory of fluctuations in physically and numerically stable particle-in-cell (PIC) simulations of electrostatic plasmas. The starting point is the single-time correlation at the start of the simulation between the statistical fluctuations of the weighted densities of macroparticle centers in the plasma particle phase-space. The fluctuations are associated with different initial conditions, typically due to the random initial conditions (in velocity space) of the macroparticles/simulation plasma, assigned according to their initial distribution of probability. The single-time correlations at all time steps and in each spatial grid cell are then determined from the Laplace–Fourier transforms of the discretized Klimontovich-like equation for the macroparticles and Maxwell’s equations for the fields, as computed by modern PIC codes. We recover the expressions for the electrostatic field and the plasma particle density fluctuation autocorrelation spectra as well as the kinetic equations describing the average evolution of PIC-simulated plasma particles, first derived by Langdon (1970b Proc. 4th Conf. Numerical Simulation of Plasmas ) using a test macroparticle approach perturbing a discretized Vlasovian plasma and then averaging the obtained physical quantity over the initial macroparticle velocity distribution. We generalize and extend these results to the modern algorithms in PIC codes using arbitrary macroparticle weights. Analytical estimates of statistical fluctuation amplitudes are derived as a function of the plasma simulation parameters, using the central limit theorem in the limit of a large number of macroparticles per cell. The theory is then used to analyze the ensemble averaging technique of PIC simulations where statistical averages are performed over ensembles of PIC simulations, modeling the same plasma physics problem but using different statistical realizations of the initial distribution functions of the macroparticles. This method is illustrated by linear Landau damping uncovering (from noise, which is usually considered numerical) the physical fluctuations driven by a single small amplitude electrostatic wave perturbing a PIC simulation plasma in equilibrium.

fluctuations correlations↗

Coupled Aerosol-Chemistry Simulations of the January 2022 Eruptions of Hunga Tonga-Hunga Ha’apai in the NASA GEOS Earth System Model

The January 2022 eruptions of the underwater Hunga Tonga-Hunga Ha’apai volcano injected more than 100 Tg of water vapor and approximately 0.5 Tg of sulfur dioxide into the stratosphere. Injected materials reached as high as ~55 km in altitude, while the main plume from the eruption travelled west over Australia and the Indian Ocean between about 20 – 30 km altitude. We investigate the transport and the impact of the erupted materials in coupled aerosol-chemistry simulations performed with the NASA Goddard Earth Observing System (GEOS) Earth system model. A sulfur mechanism introduced into the Global Modeling Initiative (GMI) stratospheric-tropospheric chemistry package allows for an interactive simulation of the water vapor-chemistry impacts, and the large water vapor perturbation results in rapid conversion of sulfur dioxide to sulfate aerosol in our aerosol mechanism. We report on the results of a multi-year ensemble of simulations performed with this system that include a control ensemble (no eruption), a water vapor-only injection ensemble, and a water vapor and sulfur dioxide injection ensemble. Simulations of the near-field aerosol and chemistry transport are compared to available measurements from OMPS-LP, OMPS-NM, CALIOP, MLS, and other sensors. The extended impact of the volcanic materials on the stratospheric composition and chemistry over the next several years is further investigated in forecast simulations.

Peter Colarco↗

Impact of Model Resolution on Tropical Cyclone Simulation Using the HighResMIP–PRIMAVERA Multimodel Ensemble

A multimodel, multiresolution set of simulations over the period 1950–2014 using a common forcing protocol from CMIP6 HighResMIP have been completed by six modeling groups. Analysis of tropical cyclone performance using two different tracking algorithms suggests that enhanced resolution toward 25 km typically leads to more frequent and stronger tropical cyclones, together with improvements in spatial distribution and storm structure. Both of these factors reduce typical GCM biases seen at lower resolution. Using single ensemble members of each model, there is little evidence of systematic improvement in interannual variability in either storm frequency or accumulated cyclone energy as compared with observations when resolution is increased. Changes in the relationships between large-scale drivers of climate variability and tropical cyclone variability in the Atlantic Ocean are also not robust to model resolution. However, using a larger ensemble of simulations (of up to 14 members) with one model at different resolutions does show evidence of increased skill at higher resolution. The ensemble mean correlation of Atlantic interannual tropical cyclone variability increases from ~0.5 to ~0.65 when resolution increases from 250 to 100 km. In the northwestern Pacific Ocean the skill keeps increasing with 50-km resolution to 0.7. These calculations also suggest that more than six members are required to adequately distinguish the impact of resolution within the forced signal from the weather noise.

54 ENVIRONMENTAL SCIENCES↗

Changes in Annual Extremes of Daily Temperature and Precipitation in CMIP6 Models

This study presents an analysis of daily temperature and precipitation extremes with return periods ranging from 2 to 50 years in phase 6 of the Coupled Model Intercomparison Project (CMIP6) multimodel ensemble of simulations. Judged by similarity with reanalyses, the new-generation models simulate the present-day temperature and precipitation extremes reasonably well. In line with previous CMIP simulations, the new simulations continue to project a large-scale picture of more frequent and more intense hot temperature extremes and precipitation extremes and vanishing cold extremes under continued global warming. Changes in temperature extremes outpace changes in global annual mean surface air temperature (GSAT) over most landmasses, while changes in precipitation extremes follow changes in GSAT globally at roughly the Clausius–Clapeyron rate of ~7% °C –1 . Changes in temperature and precipitation extremes normalized with respect to GSAT do not depend strongly on the choice of forcing scenario or model climate sensitivity, and do not vary strongly over time, but with notable regional variations. Over the majority of land regions, the projected intensity increases and relative frequency increases tend to be larger for more extreme hot temperature and precipitation events than for weaker events. To obtain robust estimates of these changes at local scales, large initial-condition ensemble simulations are needed. Appropriate spatial pooling of data from neighboring grid cells within individual simulations can, to some extent, reduce the needed ensemble size.

54 ENVIRONMENTAL SCIENCES↗

Climates of Warm Earth-Like Planets. I. 3D Model Simulations

We present a large ensemble of simulations of an Earth-like world with increasing insolation and rotation rate. Unlike previous work utilizing idealized aquaplanet congurations we focus our simulations on modern Earth-like topography. The orbital period is the same as modern Earth, but with zero obliquity and eccentricity. The atmosphere is 1 bar N2-dominated with CO2=400 ppmv and CH4=1 ppmv. The simulations include two types of oceans; one without ocean heat transport (OHT) between grid cells as has been commonly used in the exoplanet literature, while the other is a fully coupled dynamic bathtub type ocean. The dynamical regime transitions that occur as day length increases induce climate feedbacks producing cooler temperatures, rst via the reduction of water vapor with increasing rotation period despite decreasing shortwave cooling by clouds, and then via decreasing water vapor and increasing shortwave cloud cooling, except at the highest insolations. Simulations without OHT are more sensitive to insolation changes for fast rotations while slower rotations are relatively insensitive to ocean choice. OHT runs with faster rotations tend to be similar with gyres transporting heat poleward making them warmer than those without OHT. For slower rotations OHT is directed equator-ward and no high latitude gyres are apparent. Uncertainties in cloud parameterization preclude a precise determination of habitability but do not a affect robust aspects of exoplanet climate sensitivity. This is the first paper in a series that will investigate aspects of habitability in the simulations presented herein. The datasets from this study are open source and publicly available.

Planetary systems↗