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At least 145 records · Page 8

Release of the herpes simplex virus 1 protease by self cleavage is required for proper conformation of the portal vertex

We identify an NLS within herpes simplex virus scaffold proteins that is required for optimal nuclear import of these proteins into infected or uninfected nuclei, and is sufficient to mediate nuclear import of GFP. A virus lacking this NLS replicated to titers reduced by 1000-fold, but was able to make capsids containing both scaffold and portal proteins suggesting that other functions can complement the NLS in infected cells. We also show that Vp22a, the major scaffold protein, is sufficient to mediate the incorporation of portal protein into capsids, whereas proper portal immunoreactivity in the capsid requires the larger scaffold protein pU{sub L}26. Finally, capsid angularization in infected cells did not require the HSV-1 protease unless full length pU{sub L}26 was expressed. These data suggest that the HSV-1 portal undergoes conformational changes during capsid maturation, and reveal that full length pU{sub L}26 is required for this conformational change.

60 APPLIED LIFE SCIENCES↗

Relative importance of nonlinear electron-phonon coupling and vertex corrections in the Holstein model

Determining the range of validity of Migdal’s approximation for electron-phonon (e-ph) coupled systems is a long-standing problem. Many attempts to answer this question employ the Holstein Hamiltonian, where the electron density couples linearly to local lattice displacements. When these displacements are large, however, nonlinear corrections to the interaction must also be included, which can significantly alter the physical picture obtained from this model. Using determinant quantum Monte Carlo and the self-consistent Migdal approximation, we compared superconducting and charge-density-wave correlations in the Holstein model with and without second-order nonlinear interactions. We find a disagreement between the two cases, even for relatively small values of the e-ph coupling strength, and, importantly, that this can occur in the same parameter regions where Migdal’s approximation holds. Our results demonstrate that questions regarding the validity of Migdal’s approximation go hand in hand with questions of the validity of a linear e-ph interaction.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Vertex-finding and reconstruction of contained two-track neutrino events in the MicroBooNE detector

In this work, we describe algorithms developed to isolate and accurately reconstruct two-track events that are contained within the MicroBooNE detector. This method is optimized to reconstruct two tracks of lengths longer than 5cm. This code has applications to searches for neutrino oscillations and measurements of cross sections using quasi-elastic-like charged current events. The algorithms we discuss will be applicable to all detectors running in Fermilab's Short Baseline Neutrino program (SBN), and to any future liquid argon time projection chamber (LArTPC) experiment with beam energies ~ 1 GeV. The algorithms are publicly available on a GITHUB repository. This reconstruction offers a complementary and independent alternative to the Pandora reconstruction package currently in use in LArTPC experiments, and provides similar reconstruction performance for two-track events.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Broken vertex symmetry and finite zero-point entropy in the artificial square ice ground state

In this paper, we study degeneracy and entropy in the ground state of artificial square ice. In theoretical models, individual nanomagnets are typically treated as single spins with only two degrees of freedom, leading to a twofold degenerate ground state with intensive entropy and thus no zero-point entropy. Here, we show that the internal degrees of freedom of the nanostructures can result, through edge bending of the magnetization and breaking of local magnetic symmetry at the vertices, in a transition to a highly degenerate ground state with finite zero-point entropy, similar to that of the pyrochlore spin ices. Finally, we find that these additional degrees of freedom have observable consequences in the resonant spectrum of the lattice, and predict the occurrence of edge “melting” above a critical temperature at which the magnetic symmetry is restored.

36 MATERIALS SCIENCE↗

Orbital order in FeSe: The case for vertex renormalization

We study the structure of the orbital order Γ = † xz d xz - d † yz d yz > in FeSe in light of recent scanning tunneling microscopy and angle-resolved photoemission spectroscopy (ARPES) data, which detect the shapes of the hole and electron pockets in the nematic phase. The geometry of the pockets indicates that the sign of Γ is different between the hole and electron pockets (Γ h and Γ e ). We argue that this sign change cannot be reproduced if one solves for the orbital order within the mean-field approximation, as the mean-field analysis yields either no orbital order, or order with the same sign of Γ e and Γh. We argue that another solution with the opposite signs of Γ e and Γ h emerges if we include the renormalizations of the vertices in the d -wave orbital channel. We show that the ratio |Γ e /Γ h | is of order one, independent of the strength of the interaction. We also compute the temperature variation of the energy of d xz and d yz orbitals at the center of electron pockets and compare the results with ARPES data.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗