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At least 145 records · Page 8

SANs and Large Scale Data Migration at the NASA Center for Computational Sciences

Evolution and migration are a way of life for provisioners of high-performance mass storage systems that serve high-end computers used by climate and Earth and space science researchers: the compute engines come and go, but the data remains. At the NASA Center for Computational Sciences (NCCS), disk and tape SANs are deployed to provide high-speed I/O for the compute engines and the hierarchical storage management systems. Along with gigabit Ethernet, they also enable the NCCS's latest significant migration: the transparent transfer of 300 Til3 of legacy HSM data into the new Sun SAM-QFS cluster.

Salmon, Ellen M.

Thermocapillary migration of a drop: an exact solution with Newtonian interfacial rheology and stretching/shrinkage of interfacial area elements for small Marangoni numbers

In this paper we analyze the effects of the following phenomena associated with the thermocapillary migration of a drop. The first is the influence of Newtonian surface rheology of the interface and the second is that of the energy changes associated with stretching and shrinkage of the interfacial area elements, when the drop is in motion. The former occurs because of dissipative processes in the interfacial region, such as when surfactant molecules are adsorbed at the interface in sufficient concentration. The interface is typically modeled in this instance by ascribing to it a surface viscosity. This is a different effect from that of interfacial tension gradients arising from surfactant concentration gradients. The stretching and shrinkage of interfacial area elements leads to changes in the internal energy of these elements that affects the transport of energy in the fluids adjoining the interface. When an element on the interface is stretched, its internal energy increases because of the increase in its area. This energy is supplied by the neighboring fluids that are cooled as a consequence. Conversely, when an element on the interface shrinks, the adjoining fluids are warmed. In the case of a moving drop, elements of interfacial area are stretched in the forward half of the drop, and are shrunk in the rear half. Consequently, the temperature variation on the surface of the drop and its migration speed are modified. The analysis of the motion of a drop including these effects was first performed by LeVan in 1981, in the limit when convective transport of momentum and energy are negligible. We extend the analysis of LeVan to include the convective transport of momentum by demonstrating that an exact solution of the momentum equation is obtained for an arbitrary value of the Reynolds number. This solution is then used to calculate the slightly deformed shape of the drop from a sphere.

Rheology/methods

Modeling contamination migration on the Chandra X-Ray Observatory

During its first 5 years of operation, the cold (-60 C) optical blocking filter of the Advanced CCD Imaging Spectrometer (ACIS), on board the Chandra X-ray Observatory, has accumulated a contaminating layer that attenuates the low-energy x rays. To assist in assessing the likelihood of successfully baking off the contaminant, members of the Chandra Team developed contamination-migration simulation software. The simulation follows deposition onto and (temperature-dependent) vaporization from surfaces comprising a geometrical model of the Observatory. A separate thermal analysis, augmented by on-board temperature monitoring, provides temperatures for each surface of the same geometrical model. This paper describes the physical basis for the simulations, the methodologies, and the predicted migration of the contaminant for various bake-out scenarios and assumptions.

O'Dell, Stephen L.

Shorebird Migration Patterns in Response to Climate Change: A Modeling Approach

The availability of satellite remote sensing observations at multiple spatial and temporal scales, coupled with advances in climate modeling and information technologies offer new opportunities for the application of mechanistic models to predict how continental scale bird migration patterns may change in response to environmental change. In earlier studies, we explored the phenotypic plasticity of a migratory population of Pectoral sandpipers by simulating the movement patterns of an ensemble of 10,000 individual birds in response to changes in stopover locations as an indicator of the impacts of wetland loss and inter-annual variability on the fitness of migratory shorebirds. We used an individual based, biophysical migration model, driven by remotely sensed land surface data, climate data, and biological field data. Mean stop-over durations and stop-over frequency with latitude predicted from our model for nominal cases were consistent with results reported in the literature and available field data. In this study, we take advantage of new computing capabilities enabled by recent GP-GPU computing paradigms and commodity hardware (general purchase computing on graphics processing units). Several aspects of our individual based (agent modeling) approach lend themselves well to GP-GPU computing. We have been able to allocate compute-intensive tasks to the graphics processing units, and now simulate ensembles of 400,000 birds at varying spatial resolutions along the central North American flyway. We are incorporating additional, species specific, mechanistic processes to better reflect the processes underlying bird phenotypic plasticity responses to different climate change scenarios in the central U.S.

Smith, James A.

Modelling the Future Hydroclimatology of the Lower Fraser River and its Impacts on the Spawning Migration Survival of Sockeye Salmon

Short episodic high temperature events can be lethal for migrating adult Pacific salmon (Oncorhynchus spp.). We downscaled temperatures for the Fraser River, British Columbia to evaluate the impact of climate warming on the frequency of exceeding thermal thresholds associated with salmon migratory success. Alarmingly, a modest 1.0 C increase in average summer water temperature over 100 years (1981-2000 to 2081-2100) tripled the number of days per year exceeding critical salmonid thermal thresholds (i.e. 19.0 C). Refined thresholds for two populations (Gates Creek and Weaver Creek) of sockeye salmon (Oncorhynchus nerka) were defined using physiological constraint models based on aerobic scope. While extreme temperatures leading to complete aerobic collapse remained unlikely under our warming scenario, both populations were increasingly forced to migrate upriver at reduced levels of aerobic performance (e.g. in 80% of future simulations, => 90% of salmon encountered temperatures exceeding population specific thermal optima for maximum aerobic scope; T(sub opt)) = 16.3 C for Gates Creek and T(sub sopt)=14.5 C for Weaver Creek). Assuming recent changes to river entry timing persist, we also predicted dramatic increases in the probability of freshwater mortality for Weaver Creek salmon due to reductions in aerobic, and general physiological, performance (e.g. in 42% of future simulations =>50% of Weaver Creek fish exceeded temperature thresholds associated with 0 - 60% of maximum aerobic scope). Potential for adaptation via directional selection on run-timing was more evident for the Weaver Creek population. Early entry Weaver Creek fish experienced 25% (range: 15 - 31%) more suboptimal temperatures than late entrants, compared with an 8% difference (range: 0 - 17%) between early and late Gates Creek fish. Our results emphasize the need to consider daily temperature variability in association with population-specific differences in behaviour and physiological constraints when forecasting impacts of climate change on migratory survival of aquatic species.

Hague, M. J.

Investigating Delamination Migration in Composite Tape Laminates

A modification to a recently developed test specimen designed to investigate migration of a delamination between neighboring ply interfaces in tape laminates is presented. The specimen is a cross-ply laminated beam consisting of 40 plies with a polytetrafluoroethylene insert spanning part way along its length. The insert is located between a lower 0-degree ply (specimen length direction) and a stack of four 90-degree plies (specimen width direction). The modification involved a stacking sequence that promotes stable delamination growth prior to migration, and included a relocation of the insert from the specimen midplane to the interface between plies 14 and 15. Specimens were clamped at both ends onto a rigid baseplate and loaded on their upper surface via a piano hinge assembly, resulting in a predominantly flexural loading condition. Tests were conducted with the load-application point positioned at various locations along a specimen's span. This position affected the sequence of damage events during a test.

Ratcliffe, James G.

Nanopore Device for Reversible Ion and Molecule Sensing or Migration

Disclosed are methods and devices for detection of ion migration and binding, utilizing a nanopipette adapted for use in an electrochemical sensing circuit. The nanopipette may be functionalized on its interior bore with metal chelators for binding and sensing metal ions or other specific binding molecules such as boronic acid for binding and sensing glucose. Such a functionalized nanopipette is comprised in an electrical sensor that detects when the nanopipette selectively and reversibly binds ions or small molecules. Also disclosed is a nanoreactor, comprising a nanopipette, for controlling precipitation in aqueous solutions by voltage-directed ion migration, wherein ions may be directed out of the interior bore by a repulsing charge in the bore.

Pourmand, Nader

Multicore Considerations for Legacy Flight Software Migration

In this paper we will discuss potential benefits and pitfalls when considering a migration from an existing single core code base to a multicore processor implementation. The results of this study present options that should be considered before migrating fault managers, device handlers and tasks with time-constrained requirements to a multicore flight software environment. Possible future multicore test bed demonstrations are also discussed.

legacy flight software

Effects of Angular Frequency During Clinorotation on Mesenchymal Stem Cell Morphology and Migration

Background/Objectives: Ground-based microgravity simulation can reproduce the apparent effects of weightlessness in spaceflight using clinostats that continuously reorient the gravity vector on a specimen, creating a time-averaged nullification of gravity. In this work, we investigated the effects of clinorotation speed on the morphology, cytoarchitecture, and migration behavior of human mesenchymal stem cells (hMSCs). Methods: We compared cell responses at clinorotation speeds of 0, 30, 60, and 75 rpm over 8 hours in a recently developed lab-on-chip-based clinostat system. Time lapse light microscopy was used to visualize changes in cell morphology during and after cessation of clinorotation. Cytoarchitecture was assessed by actin and vinculin staining, and chemotaxis was examined using time lapse light microscopy of cells in NGF (100 ng/ml) gradients. Results: Among clinorotated groups, cell area distributions indicated a greater inhibition of cell spreading with higher angular frequency (p is less than 0.005), though average cell area at 30 rpm after 8 hours became statistically similar to control (p = 0.794). Cells at 75rpm clinorotation remained viable and were able to re-spread after clinorotation. In chemotaxis chambers clinorotation did not alter migration patterns in elongated cells, but most clinorotated cells exhibited cell retraction, which strongly compromised motility.

microgravity

Technical Challenges and Lessons from the Migration of the GLOBE Data and Information System to Utilize Cloud Computing Service

The Global Learning and Observation to Benefit the Environment (GLOBE) Data and Information System supports an international science and education program with capabilities to accept local environment observations, archive, display and visualize them along with global satellite observations. Since its inception twenty years ago, the Web and database system has been upgraded periodically to accommodate the changes in technology and the steady growth of GLOBEs education community and collection of observations. Recently, near the end-of-life of the system hardware, new commercial computer platform options were explored and a decision made to utilize Cloud services. Now the GLOBE DIS has been fully deployed and maintained using Amazon Cloud services for over two years now. This paper reviews the early risks, actual challenges, and some unexpected findings as a result of the GLOBE DIS migration. We describe the plans, cost drivers and estimates, highlight adjustments that were made and suggest improvements. We present the trade studies for provisioning, for load balancing, networks, processing, storage, as well as production, staging and backup systems. We outline the migration teams skills and required level of effort for transition, and resulting changes in the overall maintenance and operations activities. Examples include incremental adjustments to processing capacity and frequency of backups, and efforts previously expended on hardware maintenance that were refocused onto application-specific enhancements.

GLOBE

Technical Challenges and Lessons from the Migration of the GLOBE Data and Information System to Utilize Cloud Computing Service

The Global Learning and Observation to Benefit the Environment (GLOBE) Data and Information System supports an international science and education program with capabilities to accept local environment observations, archive, display and visualize them along with global satellite observations. Since its inception twenty years ago, the Web and database system has been upgraded periodically to accommodate the changes in technology and the steady growth of GLOBEs education community and collection of observations. Recently, near the end-of-life of the system hardware, new commercial computer platform options were explored and a decision made to utilize Cloud services. Now the GLOBE DIS has been fully deployed and maintained using Amazon Cloud services for over two years now. This paper reviews the early risks, actual challenges, and some unexpected findings as a result of the GLOBE DIS migration. We describe the plans, cost drivers and estimates, highlight adjustments that were made and suggest improvements. We present the trade studies for provisioning, for load balancing, networks, processing, storage, as well as production, staging and backup systems. We outline the migration teams skills and required level of effort for transition, and resulting changes in the overall maintenance and operations activities. Examples include incremental adjustments to processing capacity and frequency of backups, and efforts previously expended on hardware maintenance that were refocused onto application-specific enhancements.

GLOBE Data

Modeling Contamination Migration on the Chandra X-Ray Observatory - IV

During its first 18 years of operation, the cold (about -60degC) optical blocking filters of the Advanced CCD Imaging Spectrometer (ACIS), aboard the Chandra X-ray Observatory, has accumulated a growing layer of molecular contamination, which attenuates low-energy x rays. Over the past several years, the accumulation rate, spatial distribution, and composition have changed. This evolution has motivated further analysis of contamination migration within and near the ACIS cavity, in part to evaluate potential bake-out scenarios intended to reduce the level of contamination. This paper, the fourth on this topic, reports the results of recent contamination-migration simulations and their relevance to a decision whether to bake-out the ACIS instrument.

X-ray astronomy CCDs

Downward Migration of the Zonal‐Mean Circulation in the Tropical Atmosphere

The annular modes of the extratropical atmosphere have received much attention for quantifying variability of the jet streams and storm tracks, despite the fact that the midlatitude circulation itself does not vary uniformly with longitude. While tropical fluctuations in geopotential height have lower amplitude than in the extratropics, they exhibit stronger zonal coherence, or dynamical annularity. A simple index is developed to characterize zonal‐mean anomalies of the tropical circulation. It reveals that anomalies in geopotential height and zonal wind migrate downward from the upper troposphere to the surface on a time scale of about 10 days. These features are distinguishable from known modes of tropical variability, the Madden‐‐Julian Oscillation in particular. Evidence from reanalysis and idealized model experiments confirms that this downward migration is quite generic and driven by mechanically forced variations in the strength of the Hadley circulation on subseasonal time scales.

Atmospheric dynamics

Delaware Ecological Forecasting: Assessing Land Cover and Soil to Identify Suitable Sites for Tidal Marsh Migration in Delaware

Tidal wetlands provide vital resources for the state of Delaware, crucial not only for maintaining important ecosystem functions, but also for providing human populations with substantial services. Healthy wetland networks offer protection from severe weather, reduce flooding, improve water quality, and provide opportunities for education and recreation. However, human activities in combination with natural events, continue to cause substantial loss of wetland cover and damage wetland health. Over the last thirty years, the state of Delaware has experienced a net loss of roughly 5,000 acres of wetland. In collaboration with the Delaware Department of Natural Resources and Environmental Control (DNREC), the team used NASA Earth observations including Landsat 5 Thematic Mapper (TM), Landsat 8 Operational Land Imager (OLI), Terra Moderate Resolution Imaging Spectroradiometer (MODIS), and Global Precipitation Measurement Integrated Multi-Satellite Retrievals (GPM IMERG) to develop a methodology to monitor recent changes in wetland cover and forecast landward marsh migration due to sea-level rise, changes to climate, and human development. Trend analysis of current and past climate conditions in precipitation and temperature revealed an overall increase in both metrics. Using Land Change Modeler in TerrSet and Suitability Modeler in ArcGIS Pro, the team visualized landcover shifts over the last 20 years, indicating a general pattern of net wetland loss and identified locations where marsh migration could potentially occur in the future. These observations will enable better planning for restoration activities and in form decision-making to preserve wetland health and ecosystem functions.

McKenna Brahler

Applications of MERRA-2 data for avian migration, biomass burning, and dusty atmospheric rivers

Three different applications of MERRA-2 data are presented. 1) Using radar data, we introduced a new concept for spatial patterns of bird migration across the contiguous U.S. This approach allowed us to use MERRA-2 data and learn that remote forcing in the tropical Pacific—through a chain of processes including atmospheric Rossby wave trains— controls the climatic conditions, associated with bird migration in North America. 2) We showed that emissions from biomass burning in the Congo Basin are partly controlled by the low-level winds, which are in turn associated with the intensity of the subtropical high in the Indian Ocean. Using back-trajectory analysis, we found that these emissions combined with their transport mechanism explain the interannual variability of black carbon in West Africa. 3) Our analysis showed that atmospheric rivers in the Middle East contribute to both heavy flood and dust transport within their corridor. We also found that warm advection and rain-on-snow effect of dusty atmospheric rivers further enhance the chance of flood through rapid snowmelt processes.

Amin Dezfuli

Alaska Ecological Conservation: Using NASA Earth Observations to Identify Recent Changes in River Ice Phenology and Its Impacts on Caribou Migration

Each fall, caribou (Rangifer tarandus) in the Western Arctic Herd migrate hundreds of kilometers across northwestern Alaska to acquire seasonal resources and reach wintering grounds. Various rivers intersect migration paths, and caribou can only cross over open water or high-ice extents but are unable to cross rivers in stages of partial freezing. Recent temperature increases in Alaska can alter the timing and duration of ice formation periods, impeding migratory patterns. The Massachusetts NASA DEVELOP team partnered with the National Park Service in Alaska to detect river ice onset dates and formation periods using Landsat 8 Operational Land Imager and Landsat 9 Operational Land Imager-2, Sentinel-1 C-band Synthetic Aperture Radar and Sentinel-2A/B MultiSpectral Instrument imagery in Google Earth Engine. This feasibility analysis measured ice coverage using the Normalized Difference Infrared Index, Relative Difference River Ice, and Vertical-Vertical/Vertical-Horizontal backscatter values based on the spectral and surface characteristics of rivers. The team produced annual freezing timelines, time series plots, and maps at three river stretches to analyze river ice phenology changes. Radar imagery assessed ice coverage more accurately, while optical imagery better identified ice onset dates. Meanwhile indices were unable to robustly establish ice formation thresholds across the study period. These study results can help the National Park Service to better evaluate spatiotemporal migratory shifts and contextualize recent regional caribou declines.

river phenology

Alaska Ecological Conservation II: Using NASA Earth Observations to Identify Recent Changes in Vegetation Phenology and Its Impacts on Caribou Calving and Migration

Caribou are known for their long-distance migrations from wintering grounds to specified calving zones. Notably, the Western Arctic Herd (WAH) is the largest caribou herd in Northwestern Alaska that exhibits this behavior. These calving zones are highly predictable, and research suggests that calving and the availability of high-quality vegetation are correlated. We partnered with the U.S. National Park Service in Northwestern Alaska to use Terra and Aqua Moderate Resolution Imaging Spectroradiometer(MODIS)and Harmonized Landsat and Sentinel-2 (HLS) imagery to derive Normalized Difference Vegetated Index (NDVI) values and assess vegetation phenology in calving zones from 2000 –2024. Our partners seek to understand if observed changes in caribou migration patterns and calving events correlate with shifts in the availability of nutrient-rich vegetation. Our results showed spatial variations of highly vegetated zones and annual shifts in the timing and length of growing seasons. While limitations existed in the MODIS and HLS datasets, we demonstrated feasibility using National Aeronautics and Space Administration (NASA)Earth observations for NDVI analysis over the study region. Using location data, our results may further research into caribou calving behaviors.

NDVI

Applications of MERRA-2 Data for Avian Migration, Biomass Burning, and Dusty Atmospheric Rivers

Three different applications of MERRA-2 data are presented. 1) Using radar data, we introduced a new concept for spatial patterns of bird migration across the contiguous U.S. This approach allowed us to use MERRA-2 data and learn that remote forcing in the tropical Pacific—through a chain of processes including atmospheric Rossby wave trains— controls the climatic conditions, associated with bird migration in North America. 2) We showed that emissions from biomass burning in the Congo Basin are partly controlled by the low-level winds, which are in turn associated with the intensity of the subtropical high in the Indian Ocean. Using back-trajectory analysis, we found that these emissions combined with their transport mechanism explain the interannual variability of black carbon in West Africa. 3) Our analysis showed that atmospheric rivers in the Middle East contribute to both heavy flood and dust transport within their corridor. We also found that warm advection and rain-on-snow effect of dusty atmospheric rivers further enhance the chance of flood through rapid snowmelt processes.

Amin Dezfuli