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At least 145 records · Page 8

Sub-Grid Model Improving Shrinking Core Simulations of Redox-Sensitive Technetium Release From Slag Cement Waste Forms - 17295

Numerical simulation of Tc transport in reducing cementitious materials undergoing oxidation is challenging because the effective solid-solute partition coefficient (K{sub d}) varies greatly between the reduced and oxidized states, assuming the Tc mass loading far exceeds that required to reach solubility in the aqueous phase, as is typical in waste disposal. In a conventional finite-volume formulation, the local aqueous concentration increases orders of magnitude when a computational cell switches from a reducing to oxidizing condition, which is an artifact of numerical discretization. In principal such artifacts can be reduced to an insignificant level by refining the computational grid. However, this approach is not feasible in typical facility scale applications due to computer runtime and storage limitations. In this paper an alternative sub-grid Tc release model is derived to approximately capture redox processes occurring at scales smaller than the computational mesh. This alternative approach introduces minimal additional computational expense, while significantly reducing numerical artifacts in the form of Tc concentration / flux spikes. The method is illustrated for two simple geometries and the Savannah River Site Saltstone waste Disposal Facility. The sub-grid model is shown to significantly reduce artificial spikes in Tc-99 release, resulting in more physically realistic numerical simulations. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

An immersed boundary method for fluid–structure interaction with compressible multiphase flows

This paper presents a two-dimensional immersed boundary method for fluid–structure interaction with compressible multiphase flows involving large structure deformations. This method involves three important parts: flow solver, structure solver and fluid–structure interaction coupling. In the flow solver, the compressible multiphase Navier–Stokes equations for ideal gases are solved by a finite difference method based on a staggered Cartesian mesh, where a fifth-order accuracy Weighted Essentially Non-Oscillation (WENO) scheme is used to handle spatial discretization of the convective term, a fourth-order central difference scheme is employed to discretize the viscous term, the third-order TVD Runge–Kutta scheme is used to discretize the temporal term, and the level-set method is adopted to capture the multi-material interface. In this work, the structure considered is a geometrically non-linear beam which is solved by using a finite element method based on the absolute nodal coordinate formulation (ANCF). The fluid dynamics and the structure motion are coupled in a partitioned iterative manner with a feedback penalty immersed boundary method where the flow dynamics is defined on a fixed Lagrangian grid and the structure dynamics is described on a global coordinate. We perform several validation cases (including fluid over a cylinder, structure dynamics, flow induced vibration of a flexible plate, deformation of a flexible panel induced by shock waves in a shock tube, an inclined flexible plate in a hypersonic flow, and shock-induced collapse of a cylindrical helium cavity in the air), and compare the results with experimental and other numerical data. The present results agree well with the published data and the current experiment. Finally, we further demonstrate the versatility of the present method by applying it to a flexible plate interacting with multiphase flows.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Simulations of Turbine Cooling Flows Using a Multiblock-Multigrid Scheme

Results from numerical simulations of air flow and heat transfer in a 'branched duct' geometry are presented. The geometry contains features, including pins and a partition, as are found in coolant passages of turbine blades. The simulations were performed using a multi-block structured grid system and a finite volume discretization of the governing equations (the compressible Navier-Stokes equations). The effects of turbulence on the mean flow and heat transfer were modeled using the Baldwin-Lomax turbulence model. The computed results are compared to experimental data. It was found that the extent of some regions of high heat transfer was somewhat under predicted. It is conjectured that the underlying reason is the local nature of the turbulence model which cannot account for upstream influence on the turbulence field. In general, however, the comparison with the experimental data is favorable.

Steinthorsson, Erlendur↗

A MIMD implementation of a parallel Euler solver for unstructured grids

A mesh-vertex finite volume scheme for solving the Euler equations on triangular unstructured meshes is implemented on a MIMD (multiple instruction/multiple data stream) parallel computer. Three partitioning strategies for distributing the work load onto the processors are discussed. Issues pertaining to the communication costs are also addressed. We find that the spectral bisection strategy yields the best performance. The performance of this unstructured computation on the Intel iPSC/860 compares very favorably with that on a one-processor CRAY Y-MP/1 and an earlier implementation on the Connection Machine.

Venkatakrishnan, V.↗

Source Partitioning of Methane Emissions and its Seasonality in the U.S. Midwest

Abstract The methane (CH 4 ) budget and its source partitioning are poorly constrained in the Midwestern United States. We used tall tower (185 m) aerodynamic flux measurements and atmospheric scale factor Bayesian inversions to constrain the monthly budget and to partition the total budget into natural (e.g., wetlands) and anthropogenic (e.g., livestock, waste, and natural gas) sources for the period June 2016 to September 2017. Aerodynamic flux observations indicated that the landscape was a CH 4 source with a mean annual CH 4 flux of +13.7 ± 0.34 nmol m −2 s −1 and was rarely a net sink. The scale factor Bayesian inversion analyses revealed a mean annual source of +12.3 ± 2.1 nmol m −2 s −1 . Flux partitioning revealed that the anthropogenic source (7.8 ± 1.6 Tg CH 4 yr −1 ) was 1.5 times greater than the bottom‐up gridded United States Environmental Protection Agency inventory, in which livestock and oil/gas sources were underestimated by 1.8‐fold and 1.3‐fold, respectively. Wetland emissions (4.0 ± 1.2 Tg CH 4 yr −1 ) were the second largest source, accounting for 34% of the total budget. The temporal variability of total CH 4 emissions was dominated by wetlands with peak emissions occurring in August. In contrast, emissions from oil/gas and other anthropogenic sources showed relatively weak seasonality.

Chen, Zichong↗

CMS multicore scheduling strategy

In the next years, processor architectures based on much larger numbers of cores will be most likely the model to continue 'Moore's Law' style throughput gains. This not only results in many more jobs in parallel running the LHC Run 1 era monolithic applications, but also the memory requirements of these processes push the workernode architectures to the limit. One solution is parallelizing the application itself, through forking and memory sharing or through threaded frameworks. CMS is following all of these approaches and has a comprehensive strategy to schedule multicore jobs on the GRID based on the glideinWMS submission infrastructure. The main component of the scheduling strategy, a pilot-based model with dynamic partitioning of resources that allows the transition to multicore or whole-node scheduling without disallowing the use of single-core jobs, is described. This contribution also presents the experiences made with the proposed multicore scheduling schema and gives an outlook of further developments working towards the restart of the LHC in 2015.

Perez-Calero Yzquierdo, Antonio↗

Impact ejecta on the moon

The partitioning of energy and the distribution of the resultant ejecta on the moon is numerically modeled using a Eulerian finite difference grid. The impact of an iron meteoroid at 15 km/sec on a gabbroic anorthosite lunar crust is examined. The high speed impact induced flow is described over the entire hydrodynamic regime from a time where the peak pressures are 6 Mbar until the stresses everywhere in the flow are linearly elastic, and less than 5 kbar. Shock-induced polymorphic phase changes, (plagioclase and pyroxene to hollandite and perovskite), and the subsequent reversion to low pressure phases are demonstrated to enhance shock wave attenuation. A rate-dependent equation of state is used for describing the hysteretic effect of the phase change. Ballistic equations for a spherical planet are then applied to material with net velocity away from the moon.

Okeefe, J. D.↗

Double sweep preconditioner for optimized Schwarz methods applied to the Helmholtz problem

This paper presents a preconditioner for non-overlapping Schwarz methods applied to the Helmholtz problem. Starting from a simple analytic example, we show how such a preconditioner can be designed by approximating the inverse of the iteration operator for a layered partitioning of the domain. The preconditioner works by propagating information globally by concurrently sweeping in both directions over the subdomains, and can be interpreted as a coarse grid for the domain decomposition method. The resulting algorithm is shown to converge very fast, independently of the number of subdomains and frequency. The preconditioner has the advantage that, like the original Schwarz algorithm, it can be implemented as a matrix-free routine, with no additional preprocessing.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

PLATO (Parallel Load Assignment Tool): A Parallel Workload Partitioner for Particle-based Methods

A key first step in many large-scale high-performance scientific computing applications is the distribution of the computational domain across all participating processors of a parallel computing platform such as a shared memory machine, cluster or a tightly-coupled supercomputer. The primary goal of such a partitioning step is to ensure that the computational work performed by each process remains load-balanced throughout the execution of the parallel application. In this project, a general-purpose parallel partitioning tool, code-named PLATO, was designed and implemented. PLATO assumes that the workload is a set of points in an n-dimensional metric space. These points are abstractions of computational units that may represent point-like computational units such as celestial objects in astrophysics, atoms in materials sciences and molecules in biology/chemistry, or may represent more abstract computational units such as grid points in finite difference methods, grid elements in finite element methods or n-dimensional points in the feature space of a host of other applications. PLATO supports several key and useful capabilities, namely: (a) multiple load partitioning strategies, (b) support for arbitrary user-defined processor topology, (c) pre-fetching data from neighboring processors based on user-defined parameters, and (d) support for arbitrary number and types of attributes associated with each point in the computational domain. PLATO is implemented in the C programming language using Message Passing Interface (MPI) for inter-processor communications and its parallel performance tested on up to 48 processors of a shared memory machine. This report includes a detailed performance study of PLATO using parallel speedup and iso-efficiency as the two main metrics of parallel performance. In addition, a user manual and DOXYGEN generated code documentation have been included for completeness.

97 MATHEMATICS AND COMPUTING↗

Data traffic reduction schemes for Cholesky factorization on asynchronous multiprocessor systems

Communication requirements of Cholesky factorization of dense and sparse symmetric, positive definite matrices are analyzed. The communication requirement is characterized by the data traffic generated on multiprocessor systems with local and shared memory. Lower bound proofs are given to show that when the load is uniformly distributed the data traffic associated with factoring an n x n dense matrix using n to the alpha power (alpha less than or equal 2) processors is omega(n to the 2 + alpha/2 power). For n x n sparse matrices representing a square root of n x square root of n regular grid graph the data traffic is shown to be omega(n to the 1 + alpha/2 power), alpha less than or equal 1. Partitioning schemes that are variations of block assignment scheme are described and it is shown that the data traffic generated by these schemes are asymptotically optimal. The schemes allow efficient use of up to O(n to the 2nd power) processors in the dense case and up to O(n) processors in the sparse case before the total data traffic reaches the maximum value of O(n to the 3rd power) and O(n to the 3/2 power), respectively. It is shown that the block based partitioning schemes allow a better utilization of the data accessed from shared memory and thus reduce the data traffic than those based on column-wise wrap around assignment schemes.

Naik, Vijay K.↗

Final Technical Report: Distributed Controls for High Penetrations of Renewables

The goal of this effort was to apply four potential control analysis/design approaches to the design of distributed grid control systems to address the impact of latency and communications uncertainty with high penetrations of photovoltaic (PV) generation. The four techniques considered were: optimal fixed structure control; Nyquist stability criterion; vector Lyapunov analysis; and Hamiltonian design methods. A reduced order model of the Western Electricity Coordinating Council (WECC) developed for the Matlab Power Systems Toolbox (PST) was employed for the study, as well as representative smaller systems (e.g., a two-area, three-area, and four-area power system). Excellent results were obtained with the optimal fixed structure approach, and the methodology we developed was published in a journal article. This approach is promising because it offers a method for designing optimal control systems with the feedback signals available from Phasor Measurement Unit (PMU) data as opposed to full state feedback or the design of an observer. The Nyquist approach inherently handles time delay and incorporates performance guarantees (e.g., gain and phase margin). We developed a technique that works for moderate sized systems, but the approach does not scale well to extremely large system because of computational complexity. The vector Lyapunov approach was applied to a two area model to demonstrate the utility for modeling communications uncertainty. Application to large power systems requires a method to automatically expand/contract the state space and partition the system so that communications uncertainty can be considered. The Hamiltonian Surface Shaping and Power Flow Control (HSSPFC) design methodology was selected to investigate grid systems for energy storage requirements to support high penetration of variable or stochastic generation (such as wind and PV) and loads. This method was applied to several small system models.

14 SOLAR ENERGY↗

Analysis of TRMM-LIS Lightning and Related Microphysics Using a Cell-Scale Database

Previous studies of tropical lightning activity using Tropical Rainfall Measurement Mission (TRMM) Lightning Imaging Sensor (LIS) data performed analyses of lightning behavior over mesoscale "feature" scales or over uniform grids. In order to study lightning and the governing ice microphysics intrinsic to thunderstorms at a more process-specific scale (i.e., the scale over which electrification processes and lightning occur in a "unit" thunderstorm), a new convective cell-scale database was developed by analyzing and refining the University of Utah's Precipitation Features database and retaining precipitation data parameters computed from the TRMM precipitation radar (PR), microwave imager (TMI) and LIS instruments. The resulting data base was to conduct a limited four-year study of tropical continental convection occurring over the Amazon Basin, Congo, Maritime Continent and the western Pacific Ocean. The analysis reveals expected strong correlations between lightning flash counts per cell and ice proxies, such as ice water path, minimum and average 85GHz brightness temperatures, and 18dBz echo top heights above the freezing level in all regimes, as well as regime-specific relationships between lighting flash counts and PR-derived surface rainfall rates. Additionally, radar CFADs were used to partition the 3D structure of cells in each regime at different flash counts. The resulting cell-scale analyses are compared to previous mesoscale feature and gridded studies wherever possible.

Leroy, Anita↗

Improved techniques for outgoing wave variational principle calculations of converged state-to-state transition probabilities for chemical reactions

Improved techniques and well-optimized basis sets are presented for application of the outgoing wave variational principle to calculate converged quantum mechanical reaction probabilities. They are illustrated with calculations for the reactions D + H2 yields HD + H with total angular momentum J = 3 and F + H2 yields HF + H with J = 0 and 3. The optimization involves the choice of distortion potential, the grid for calculating half-integrated Green's functions, the placement, width, and number of primitive distributed Gaussians, and the computationally most efficient partition between dynamically adapted and primitive basis functions. Benchmark calculations with 224-1064 channels are presented.

Mielke, Steven L.↗

Updated Observations of Clouds By MODIS for Global Model Assessment

This paper describes a new global dataset of cloud properties observed by MODIS relying on the current (collection 6.1) processing of MODIS data and produced to facilitate comparison with results from the MODIS observational proxy used in climate models. The dataset merges observations from the two MODIS instruments into a single netCDF file. Statistics (mean, standard deviation, and number of observations) are accumulated over daily and monthly timescales on an equal-angle grid for viewing and illumination geometry, cloud detection, cloud-top pressure, and cloud properties (optical thickness, effective particle size, and water path) partitioned by thermodynamic phase and an assessment as to whether the underlying observations come from fully or partly cloudy pixels. Similarly partitioned joint histograms are available for (1) optical thickness and cloud-top pressure, (2) optical thickness and particle size, and (3) cloud water path and particle size. Differences with standard data products, caveats for data use, and guidelines for comparison to the MODIS simulator are described.

Robert Pincus↗

Reliable Broadcast under Cascading Failures in Interdependent Networks

Reliable broadcast is an essential tool to disseminate information among a set of nodes in the presence of failures. We present a novel study of reliable broadcast in interdependent networks, in which the failures in one network may cascade to another network. In particular, we focus on the interdependency between the communication network and power grid network, where the power grid depends on the signals from the communication network for control and the communication network depends on the grid for power. In this paper, we build a resilient solution to handle crash failures in the communication network that may cause cascading failures and may even partition the network. In order to guarantee that all the correct nodes deliver the messages, we use soft links, which are inactive backup links to non-neighboring nodes that are only active when failures occur. At the core of our work is a fully distributed algorithm for the nodes to predict and collect the information of cascading failures so that soft links can be maintained to correct nodes prior to the failures. In the presence of failures, soft links are activated to guarantee message delivery and new soft links are built accordingly for long term robustness. Our evaluation results show that the algorithm achieves low packet drop rate and handles cascading failures with little overhead.

cascading failures↗

RANS-MP: A Portable Parallel Navier-Stokes Solver

RANS-MP, a new implementation of a single-grid Navier-Stokes solver using the diagonalized Beam-Warming approximate-factorization scheme, is presented. This first release of the completely rewritten solver employs the following optimizations: (1) Bi-directional multi-partition method for the ADI solver part; this improves granularity and load balance; (2) Improved cache usage through elimination of non-unit-stride array access (possible in part due to multi-partitioning); (3) Preprocessing of communicating boundary conditions to streamline logic during time stepping; (4) Truly parallel, high-performance I/O using the newly-developed MPI-IO library; (5) Elimination of large amounts of redundant operations through efficient use of workspace. Results of some realistic wing computations on the IBM SP2 computer will be presented. We will demonstrate that excellent absolute performance and scalability are obtained with RANS-MP, even for relatively small grid sizes. Besides high performance, an outstanding feature of RANS-MP is its true portability, due to the use of the portable message passing and I/O libraries MPI and MPI-IO.

VanderWijngaart, Rob F.↗

An efficient parallel implementation of explicit multirate Runge–Kutta schemes for discontinuous Galerkin computations

Although explicit time integration schemes require small computational efforts per time step, their efficiency is severely restricted by their stability limits. Indeed, the multi-scale nature of some physical processes combined with highly unstructured meshes can lead some elements to impose a severely small stable time step for a global problem. Multirate methods offer a way to increase the global efficiency by gathering grid cells in appropriate groups under local stability conditions. These methods are well suited to the discontinuous Galerkin framework. The parallelization of the multirate strategy is challenging because grid cells have different workloads. The computational cost is different for each sub-time step depending on the elements involved and a classical partitioning strategy is not adequate any more. In this paper, we propose a solution that makes use of multi-constraint mesh partitioning. It tends to minimize the inter-processor communications, while ensuring that the workload is almost equally shared by every computer core at every stage of the algorithm. Particular attention is given to the simplicity of the parallel multirate algorithm while minimizing computational and communication overheads. Our implementation makes use of the MeTiS library for mesh partitioning and the Message Passing Interface for inter-processor communication. Performance analyses for two and three-dimensional practical applications confirm that multirate methods preserve important computational advantages of explicit methods up to a significant number of processors.

97 MATHEMATICS AND COMPUTING↗

Linking Deep and Shallow Convective Mass Fluxes via an Assumed Entrainment Distribution in CAM5‐CLUBB: Parameterization and Simulated Precipitation Variability

Abstract We modify the Zhang‐McFarlane (ZM) deep convection scheme in the Community Atmosphere Model version 5 to couple it with a unified parameterization for boundary‐layer turbulence and shallow convection, that is, Cloud Layers Unified by Binormals (CLUBB). By assuming a lognormal distribution of entrainment rate across the entire moist convective regimes, we link mass fluxes between shallow and deep convection, which are partitioned by the entrainment rate of the shallowest deep convective plume. Hence, a new deep convective closure is established which is coupled to the sub‐grid vertical motion variability in CLUBB. The convection feedback (or memory) effects are also considered to decrease the entrainment spectrum width and enhance the vertical velocity variability that further affect deep convection. Results show that the revised scheme improves the precipitation simulations in terms of the mean state and variability at various timescales, such as the alleviated double‐intertropical convergence zone and more realistic simulations of the seasonal variation of monsoon precipitation over East Asia, Madden‐Julian Oscillation, and precipitation diurnal phase propagations downstream of large terrains. The improvements are still seen in many aspects such as the mean‐state precipitation when turning off the convection feedback impacts in the revised scheme, emphasizing the benefits of using the modified mass‐flux closure. However, the convection feedbacks have considerable effects on the precipitation diurnal cycle simulations over regions with late‐afternoon precipitation peaks. Overall, the revised scheme provides a unified treatment for sub‐grid vertical motions across regimes of boundary‐layer turbulence, shallow convection, and deep convection, leading to better‐simulated precipitation at various timescales.

54 ENVIRONMENTAL SCIENCES↗