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At least 1,423 records · Page 79

Satellite solar-induced chlorophyll fluorescence and near-infrared reflectance capture complementary aspects of dryland vegetation productivity dynamics

Mounting evidence indicates dryland ecosystems play an important role in driving the interannual variability and trend of the terrestrial carbon sink. Nevertheless, our understanding of the seasonal dynamics of dryland ecosystem carbon uptake through photosynthesis [gross primary productivity (GPP)] remains relatively limited due in part to the limited availability of long-term data and unique challenges associated with satellite remote sensing across dryland ecosystems. Here, we comprehensively evaluated longstanding and emerging satellite vegetation proxies in their ability to capture seasonal dryland GPP dynamics. Specifically, we evaluated: 1) reflectance-based proxies normalized difference vegetation index (NDVI), soil adjusted vegetation index (SAVI), near infrared reflectance index (NIR v ), and kernel NDVI (kNDVI) from the MODerate resolution Imaging Spectroradiometer (MODIS); and 2) newly available physiologically-based proxy solar-induced chlorophyll fluorescence (SIF) from the TROPOspheric Monitoring Instrument (TROPOMI). As a performance benchmark, we used GPP estimates from a robust network of 21 western United States eddy covariance tower sites that span representative gradients in dryland ecosystem climate and functional composition. We found that NIR v and SIF were the best performing GPP proxies and captured complementary aspects of seasonal GPP dynamics across dryland ecosystem types. NIR v offered better performance than the other proxies across relatively low-productivity, sparsely non-evergreen vegetated sites (R 2 = 0.59 ± 0.13); whereas SIF best captured seasonal dynamics across relatively high-productivity sites, including evergreen-dominated sites (R 2 = 0.74 ± 0.07). Notably, across grass-dominated sites, all reflectance-based proxies (NDVI, SAVI, NIRv and kNDVI) showed significant seasonal bias (hysteresis) that strengthened with the total fraction of woody vegetation cover, likely due to seasonal patterns in woody vegetation reflectance that are unrelated to or decoupled from GPP. In conclusion, future efforts to fully integrate the complementary strengths of NIR v and SIF could significantly improve our understanding and representation of dryland GPP dynamics in satellite-based models.

54 ENVIRONMENTAL SCIENCES↗

Sub-picosecond Production of Solute Radical Cations in Tetrahydrofuran after Radiolysis

Ultrafast hole transfer from solvent radical cations produced by radiolysis with ~10 ps, 9 MeV electron pulses to solutes was investigated in tetrahydrofuran (THF). Because of rapid fragmentation of initially produced THF +• , solute radical cations are not expected and have not previously been reported. Using 9,9-Dihexyl-2,7-dibromofluorene (Br 2 F) at 5 to 1000 mM, Br 2 F +• was observed with radiation chemical yields up to G = 2.23 / 100 eV absorbed. While more than half of this was the result of direct solute ionization, the results highlight the importance of capture of holes from THF +• prior to solvation and fragmentation. The observed data show a time-resolution limited (15 ps) rise in transient absorption of Br 2 F +• , identical in form to reports of pre-solvated or dry electron capture in water and a few organic liquids, including THF. The results were thus interpreted with a similar formalism, finding C 37 = 1.7 M, the concentration at which 37% of holes escape capture. The yield of solvent hole capture can be accounted for by the formation of solvent holes adjacent to solute molecules reacting faster than they can fragment, however mechanisms such as delocalized holes or rapid hopping may play a role. Finally, low temperature results find over two times more capture, supporting the speculation that if THF +• was longer lived, the yield of capture in under 15 ps would have been at least 2x larger at 1 M Br 2 F, possibly capturing nearly all available holes from the solvent.

38 RADIATION CHEMISTRY, RADIOCHEMISTRY, AND NUCLEA↗

STEPs-SOL, a Peptoid Force Field Parameterization to Include Solvent Effects

As peptoids (N-substituted glycines) continue to gain popularity as a class of biomimetic polymers, the importance and demand for accurate force fields in molecular simulations also grow. Building on the vacuum-optimized Systematic and Extensible Force Field for Peptoids (STEPs) force field, here we present STEPs-SOL, a novel peptoid force field parametrization that effectively incorporates solvent effects to enhance the accuracy of peptoid simulations. The development of STEPs-SOL is based on the need for precise electrostatic modeling achieved through solvent-specific partial charge optimization. Here, our systematic approach significantly improves agreement with experimental measurements, reducing the mean absolute error in cis/trans ratio predictions (ΔG c/t ) by an average of 38% across multiple peptoid residues and solvent environments. This improved parametrization addresses computational challenges associated with nonbonded energies while maintaining a workflow that relies on high-level quantum mechanical data rather than depending solely on limited experimental equilibrium properties. By evaluating the effects of conformational bias in restrained electrostatic potential (RESP) charge generation and examining their impact on peptoid conformations in various solvents, we enhance our understanding of peptoid structural dynamics while providing a more accurate modeling framework.

force field↗

Optimizing Seasonal‐To‐Decadal Analog Forecasts With a Learned Spatially‐Weighted Mask

Abstract Seasonal‐to‐decadal climate prediction is crucial for decision‐making in a number of industries, but forecasts on these timescales have limited skill. Here, we develop a data‐driven method for selecting optimal analogs for seasonal‐to‐decadal analog forecasting. Using an interpretable neural network, we learn a spatially‐weighted mask that quantifies how important each grid point is for determining whether two climate states will evolve similarly. We show that analogs selected using this weighted mask provide more skillful forecasts than analogs that are selected using traditional spatially‐uniform methods. This method is tested on two prediction problems using the Max Planck Institute for Meteorology Grand Ensemble: multi‐year prediction of North Atlantic sea surface temperatures, and seasonal prediction of El Niño Southern Oscillation. This work demonstrates a methodical approach to selecting analogs that may be useful for improving seasonal‐to‐decadal forecasts and understanding their sources of skill.

Geology↗

Congo Basin Water Balance and Terrestrial Fluxes Inferred From Satellite Observations of the Isotopic Composition of Water Vapor

Large spatio-temporal gradients in the Congo basin vegetation and rainfall are observed. However, its water-balance (evapotranspiration minus precipitation, or ET - P) is typically measured at basin-scales, limited primarily by river-discharge data, spatial resolution of terrestrial water storage measurements, and poorly constrained ET. We use observations of the isotopic composition of water vapor to quantify the spatio-temporal variability of net surface water fluxes across the Congo Basin between 2003 and 2018. These data are calibrated at basin scale using satellite gravity and total Congo river discharge measurements and then used to estimate time-varying ET - P over four quadrants representing the Congo Basin, providing first estimates of this kind for the region. We find that the multi-year record, seasonality, and interannual variability of ET - P from both the isotopes and the gravity/river discharge based estimates are consistent. Additionally, we use precipitation and gravity-based estimates with our water vapor isotope-based ET - P to calculate time and space averaged ET and net river discharge within the Congo Basin. These quadrant-scale moisture flux estimates indicate (a) substantial recycling of moisture in the Congo Basin (temporally and spatially averaged ET/P > 70%), consistent with models and visible light-based ET estimates, and (b) net river outflow is largest in the Western Congo where there are more rivers and higher flow rates. Our results confirm the importance of ET in modulating the Congo water cycle relative to other water sources.

54 ENVIRONMENTAL SCIENCES↗

Metaplastic and energy-efficient biocompatible graphene artificial synaptic transistors for enhanced accuracy neuromorphic computing

CMOS-based computing systems that employ the von Neumann architecture are relatively limited when it comes to parallel data storage and processing. In contrast, the human brain is a living computational signal processing unit that operates with extreme parallelism and energy efficiency. Although numerous neuromorphic electronic devices have emerged in the last decade, most of them are rigid or contain materials that are toxic to biological systems. In this work, we report on biocompatible bilayer graphene-based artificial synaptic transistors (BLAST) capable of mimicking synaptic behavior. The BLAST devices leverage a dry ion-selective membrane, enabling long-term potentiation, with ~50 aJ/µm 2 switching energy efficiency, at least an order of magnitude lower than previous reports on two-dimensional material-based artificial synapses. The devices show unique metaplasticity, a useful feature for generalizable deep neural networks, and we demonstrate that metaplastic BLASTs outperform ideal linear synapses in classic image classification tasks. With switching energy well below the 1 fJ energy estimated per biological synapse, the proposed devices are powerful candidates for bio-interfaced online learning, bridging the gap between artificial and biological neural networks.

97 MATHEMATICS AND COMPUTING↗

Guided construction of single cell reference for human and mouse lung

Accurate cell type identification is a key and rate-limiting step in single-cell data analysis. Single-cell references with comprehensive cell types, reproducible and functionally validated cell identities, and common nomenclatures are much needed by the research community for automated cell type annotation, data integration, and data sharing. Here, we develop a computational pipeline utilizing the LungMAP CellCards as a dictionary to consolidate single-cell transcriptomic datasets of 104 human lungs and 17 mouse lung samples to construct LungMAP single-cell reference (CellRef) for both normal human and mouse lungs. CellRefs define 48 human and 40 mouse lung cell types catalogued from diverse anatomic locations and developmental time points. We demonstrate the accuracy and stability of LungMAP CellRefs and their utility for automated cell type annotation of both normal and diseased lungs using multiple independent methods and testing data. We develop user-friendly web interfaces for easy access and maximal utilization of the LungMAP CellRefs.

59 BASIC BIOLOGICAL SCIENCES↗

Global trend of methane abatement inventions and widening mismatch with methane emissions

Substantially reducing methane emissions is the fastest way to repress near-term warming and is an essential prerequisite for reaching the 1.5 °C target. However, knowledge about the global invention trend, sectoral and national distribution and international diffusion of methane-targeted abatement technologies (MTATs) remains limited. On the basis of patent data, we identify more than 175,000 MTAT inventions applied between 1990 and 2019 by 133 countries or dependent territories. Our results revealed that after sustained growth of more than fourfold, the number of global high-quality MTAT inventions declined by 3.5% annually from 2010 to 2019. The sectoral and national-level distributions of MTAT inventions and methane emissions are strongly mismatched. Additionally, the international diffusion of MTATs is 11.1% lower than that of overall climate change mitigation technologies and most transfers occur between developed countries or flow to China, South Korea and Brazil; however, other developing countries and the least developed countries are rarely involved.

54 ENVIRONMENTAL SCIENCES↗

Search for quantum gravity using astrophysical neutrino flavour with IceCube

Along their long propagation from production to detection, neutrinos undergo flavour conversions that convert their types or flavours. High-energy astrophysical neutrinos propagate unperturbed over a billion light years in vacuum and are sensitive to small effects caused by new physics. Effects of quantum gravity are expected to appear at the Planck energy scale. Such a high-energy universe would have existed only immediately after the Big Bang and is inaccessible by human technologies. On the other hand, quantum gravity effects may exist in our low-energy vacuum, but are suppressed by inverse powers of the Planck energy. Measuring the coupling of particles to such small effects is difficult via kinematic observables, but could be observable through flavour conversions. Furthermore, we report a search with the IceCube Neutrino Observatory, using astrophysical neutrino flavours to search for new space–time structure. We did not find any evidence of anomalous flavour conversion in the IceCube astrophysical neutrino flavour data. We apply the most stringent limits of any known technologies, down to 10 –42 GeV –2 with Bayes factor greater than 10 on the dimension-six operators that parameterize the space–time defects. We thus unambiguously reach the parameter space of quantum-gravity-motivated physics.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

UV-Vis spectrophotometric determination of rare earth elements (REE) speciation at near-neutral to alkaline pH. Part II: hydrolysis of Er from 25 to 75 °C

Aqueous speciation of rare earth elements (REE) controls their mobilization, fractionation, and enrichment in the natural waters. Geochemical modeling of their speciation is key to improve our understanding of the formation of economic mineral deposits, for developing mineral separation and mine tailing recovery technologies, and for characterizing the geochemistry of thermal water. However, our ability to predict the fate of REE in a wide pH and temperature range is limited by the scarcity of thermodynamic data for the REE hydroxyl complexes. In part I of this study (H. J. Han and A. P. Gysi, Dalton Trans., 2024, 53, 13129–13141), the optical properties of m-cresol purple (mCP) were determined using UV-Vis spectrophotometry between 25 and 75 °C in order to develop a method for deriving the hydrolysis constants of erbium (Er). Here, UV-Vis spectrophotometry experiments were conducted as a function of temperature between 35 and 75 °C to determine the hydrolysis of Er in near-neutral to alkaline solutions using mCP as an in situ pH color indicator. Here, the experiments were conducted with Er concentrations from 0 to ~0.253 mmol kg –1 in low ionic strength solutions (≤0.001 mol kg –1 ).

58 GEOSCIENCES↗

A proposed method for addressing large unphysical uncertainties in mubar

Mubar uncertainties in Section MF 34 MT 2 of ENDF/B-VIII.0 data are sometimes too large. Physical limitations of the bounds of mubar limit the maximum uncertainty to be < 1.0 and usually $\ll$ 1.0. Two ad hoc methods are proposed to artificially constrain the randomly sampled values of mubar to allowable values. The application of NJOY’s mubar covariance matrix to the “sandwich rule” is also discussed and a consistent way to apply sensitivity coefficients is described. Mubar uncertainties for the Jezebel k eff were found to be 156 pcm – a value comparable to other evaluated cross section uncertainties.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

MHz free electron laser x-ray diffraction and modeling of pulsed laser heated diamond anvil cell

A new diamond anvil cell experimental approach has been implemented at the European x-ray Free Electron Laser, combining pulsed laser heating with MHz x-ray diffraction. In this report we use this setup to determine liquidus temperatures under extreme conditions, based on the determination of time-resolved crystallization. The focus is on a Fe-Si-O ternary system, relevant for planetary cores. This time-resolved diagnostic is complemented by a finite-element model, reproducing temporal temperature profiles measured experimentally using streaked optical pyrometry. This model calculates the temperature and strain fields by including (i) pressure and temperature dependencies of material properties, and (ii) the heat-induced thermal stress, including feedback effect on material parameter variations. Making our model more realistic, these improvements are critical as they give 7000 K temperature differences compared to previous models. Laser intensities are determined by seeking minimal deviation between measured and modeled temperatures. Combining models and streak optical pyrometry data extends temperature determination below detection limit. The presented approach can be used to infer the liquidus temperature by the appearance of SiO 2 diffraction spots. In addition, temperatures obtained by the model agree with crystallization temperatures reported for Fe–Si alloys. Our model reproduces the planetary relevant experimental conditions, providing temperature, pressure, and volume conditions. Those predictions are then used to determine liquidus temperatures at experimental timescales where chemical migration is limited. This synergy of novel time-resolved experiments and finite-element modeling pushes further the interpretation capabilities in diamond anvil cell experiments.

36 MATERIALS SCIENCE↗

Full-stack Quantification of Variability in Predicting Ion Transport Properties using Machine-learned Interatomic Potentials

Machine-learned interatomic potentials (MLIPs) have become the state-of-the-art for performing accurate, scalable molecular dynamics (MD) simulations. It is therefore crucial to understand and quantify the reliability of MLIPs for downstream property predictions. Uncertainty in predicted properties can arise from limitations in first-principles training data, intrinsic MLIP model errors in representing the data, and the statistical noise introduced during subsequent MD simulations. Using ion transport in Li7P3S11 as a case study, we systematically assess the impact of training set size and selection, neural network stochasticity, and MD sampling statistics on predicted diffusivity and activation energy. We find that when using equivariant MLIP architectures with standard MD protocols, uncertainty arising from MD sampling dominates over model-induced errors. In contrast, MLIP errors relative to the underlying first-principles data are consistently minor. Given this, there are two main routes to improving the accuracy of predictions based on MLIP potentials: adopting higher accuracy reference data generation methods, and improving the MD sampling statistics.

36 MATERIALS SCIENCE↗

CryoSegNet: accurate cryo-EM protein particle picking by integrating the foundational AI image segmentation model and attention-gated U-Net

Picking protein particles in cryo-electron microscopy (cryo-EM) micrographs is a crucial step in the cryo-EM-based structure determination. However, existing methods trained on a limited amount of cryo-EM data still cannot accurately pick protein particles from noisy cryo-EM images. The general foundational artificial intelligence–based image segmentation model such as Meta’s Segment Anything Model (SAM) cannot segment protein particles well because their training data do not include cryo-EM images. Here, we present a novel approach (CryoSegNet) of integrating an attention-gated U-shape network (U-Net) specially designed and trained for cryo-EM particle picking and the SAM. The U-Net is first trained on a large cryo-EM image dataset and then used to generate input from original cryo-EM images for SAM to make particle pickings. CryoSegNet shows both high precision and recall in segmenting protein particles from cryo-EM micrographs, irrespective of protein type, shape and size. On several independent datasets of various protein types, CryoSegNet outperforms two top machine learning particle pickers crYOLO and Topaz as well as SAM itself. The average resolution of density maps reconstructed from the particles picked by CryoSegNet is 3.33 Å, 7% better than 3.58 Å of Topaz and 14% better than 3.87 Å of crYOLO. It is publicly available at https://github.com/jianlin-cheng/CryoSegNet

59 BASIC BIOLOGICAL SCIENCES↗

Scaling pair count to next galaxy surveys

ABSTRACT Counting pairs of galaxies or stars according to their distance is at the core of real-space correlation analyses performed in astrophysics and cosmology. Upcoming galaxy surveys (LSST, Euclid) will measure properties of billions of galaxies challenging our ability to perform such counting in a minute-scale time relevant for the usage of simulations. The problem is only limited by efficient access to the data, hence belongs to the big data category. We use the popular Apache Spark framework to address it and design an efficient high-throughput algorithm to deal with hundreds of millions to billions of input data. To optimize it, we revisit the question of non-hierarchical sphere pixelization based on cube symmetries and develop a new one dubbed the ‘Similar Radius Sphere Pixelization’ (SARSPix) with very close to square pixels. It provides the most adapted indexing over the sphere for all distance-related computations. Using LSST-like fast simulations, we compute autocorrelation functions on tomographic bins containing between a hundred million to one billion data points. In each case, we achieve the construction of a standard pair-distance histogram in about 2 min, using a simple algorithm that is shown to scale, over a moderate number of nodes (16–64). This illustrates the potential of this new techniques in the field of astronomy where data access is becoming the main bottleneck. They can be easily adapted to other use-cases as nearest-neighbours search, catalogue cross-match or cluster finding. The software is publicly available from https://github.com/astrolabsoftware/SparkCorr.

79 ASTRONOMY AND ASTROPHYSICS↗

Nothing to see here: failed supernovae are faint or rare

ABSTRACT The absence of Type IIP core-collapse supernovae arising from progenitors above 17 solar masses suggests the existence of another evolutionary path by which massive stars end their lives. The direct collapse of a stellar core to a black hole without the production of a bright, explosive transient is expected to produce a long-lived, dim, red transient known as a failed supernova. Despite the detection of a number of candidates for disappearing massive stars in recent years, conclusive observational evidence for failed supernovae remains elusive. A custom-built pipeline designed for the detection of faint transients is used to re-analyse 10 yr of observations of 231 nearby galaxies from the PTF/ZTF surveys. This analysis recovers known supernovae, and yields a number of interesting transients. However, none of these are consistent with a failed supernova. Through Monte Carlo tests the recovery efficiency of our pipeline is quantified. By assuming failed supernovae occur as a Poissonian process with zero detections in the data set, 95 per cent upper limits to the rate of failed supernovae are calculated as a function of failed supernova absolute magnitude. We estimate failed supernovae to be less than 0.61, 0.33, 0.26, or 0.23 of the core-collapse SN rate for absolute magnitudes of −11, −12, −13, and −14, respectively. Finally, we show that if they exist, the Vera C. Rubin Observatory will find 1.7–3.7 failed SNe per year for an absolute bolometric luminosity of ∼6 × 1039 erg s−1 out to distances of 33–43 Mpc, depending on their assumed spectral energy distribution.

Byrne, R. A. (ORCID:0000000177661737)↗

Latent bone modelling for estimation of plutonium concentration in skeleton of former nuclear workers

Abstract The skeleton is a major plutonium retention site in the human body. Estimation of the total plutonium activity in the skeleton is a challenging problem. For most tissue donors at the United States Transuranium and Uranium Registries, a limited number of bone samples is available. The skeleton activity is calculated using plutonium activity concentration (Cskel) and skeleton weight. In this study, latent bone modelling was used to estimate Cskel from the limited number of analysed bone samples. Data from 13 non-osteoporotic whole-body donors were used to develop latent bone model (LBM) to estimate Cskel for seven cases with four to eight analysed bone samples. LBM predictions were compared to Cskel estimated using an arithmetic mean in terms of accuracy and precision. For the studied cases, LBM offered a significant reduction of uncertainty of Cskel estimate.

Environmental Sciences & Ecology↗

Conventional superconductivity in single-crystalline BiPt

Binary Bi-Pd/Pt systems have attracted a lot of interest because of their topologically nontrivial nature along with superconductivity. We report the structural and superconducting properties of high-quality single-crystalline BiPt using a comprehensive range of experimental techniques, including X-ray diffraction, electron microscopy, muon spin rotation/relaxation (𝜇⁢SR), magnetization, resistivity, and heat capacity. Our findings establish that BiPt is a weak type-II superconductor with a transition temperature (𝑇 𝑐 ) of 1.2 K which exhibits pronounced anisotropic superconducting characteristics attributed to its hexagonal crystal structure. Magnetization and electronic transport studies reveal that BiPt lies within the dirty limit, while 𝜇⁢SR and heat capacity data indicate conventional 𝑠-wave superconductivity that maintains time-reversal symmetry. Here, this work provides valuable insights into the pairing symmetry and superconducting mechanism of topologically trivial BiPt, a sound comparison system for other Bi-based topologically nontrivial superconductors.

Demagnetization↗