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At least 1,423 records · Page 79

Coding and noncoding variants in EBF3 are involved in HADDS and simplex autism

Abstract Background Previous research in autism and other neurodevelopmental disorders (NDDs) has indicated an important contribution of protein-coding (coding) de novo variants (DNVs) within specific genes. The role of de novo noncoding variation has been observable as a general increase in genetic burden but has yet to be resolved to individual functional elements. In this study, we assessed whole-genome sequencing data in 2671 families with autism (discovery cohort of 516 families, replication cohort of 2155 families). We focused on DNVs in enhancers with characterized in vivo activity in the brain and identified an excess of DNVs in an enhancer named hs737. Results We adapted the fitDNM statistical model to work in noncoding regions and tested enhancers for excess of DNVs in families with autism. We found only one enhancer (hs737) with nominal significance in the discovery (p = 0.0172), replication (p = 2.5 × 10 −3 ), and combined dataset (p = 1.1 × 10 −4 ). Each individual with a DNV in hs737 had shared phenotypes including being male, intact cognitive function, and hypotonia or motor delay. Our in vitro assessment of the DNVs showed they all reduce enhancer activity in a neuronal cell line. By epigenomic analyses, we found that hs737 is brain-specific and targets the transcription factor gene EBF3 in human fetal brain. EBF3 is genome-wide significant for coding DNVs in NDDs (missense p = 8.12 × 10 −35 , loss-of-function p = 2.26 × 10 −13 ) and is widely expressed in the body. Through characterization of promoters bound by EBF3 in neuronal cells, we saw enrichment for binding to NDD genes (p = 7.43 × 10 −6 , OR = 1.87) involved in gene regulation. Individuals with coding DNVs have greater phenotypic severity (hypotonia, ataxia, and delayed development syndrome [HADDS]) in comparison to individuals with noncoding DNVs that have autism and hypotonia. Conclusions In this study, we identify DNVs in the hs737 enhancer in individuals with autism. Through multiple approaches, we find hs737 targets the gene EBF3 that is genome-wide significant in NDDs. By assessment of noncoding variation and the genes they affect, we are beginning to understand their impact on gene regulatory networks in NDDs.

59 BASIC BIOLOGICAL SCIENCES↗

Genome-wide profiling of histone (H3) lysine 4 (K4) tri-methylation (me3) under drought, heat, and combined stresses in switchgrass

Background: Switchgrass (Panicum virgatum L.) is a warm-season perennial (C4) grass identified as an important biofuel crop in the United States. It is well adapted to the marginal environment where heat and moisture stresses predominantly affect crop growth. However, the underlying molecular mechanisms associated with heat and drought stress tolerance still need to be fully understood in switchgrass. The methylation of H3K4 is often associated with transcriptional activation of genes, including stress-responsive. Therefore, this study aimed to analyze genome-wide histone H3K4-tri-methylation in switchgrass under heat, drought, and combined stress. Results: In total, ~ 1.3 million H3K4me3 peaks were identified in this study using SICER. Among them, 7,342; 6,510; and 8,536 peaks responded under drought (DT), drought and heat (DTHT), and heat (HT) stresses, respectively. Most DT and DTHT peaks spanned 0 to + 2000 bases from the transcription start site [TSS]. By comparing differentially marked peaks with RNA-Seq data, we identified peaks associated with genes: 155 DT-responsive peaks with 118 DT-responsive genes, 121 DTHT-responsive peaks with 110 DTHT-responsive genes, and 175 HT-responsive peaks with 136 HT-responsive genes. We have identified various transcription factors involved in DT, DTHT, and HT stresses. Gene Ontology analysis using the AgriGO revealed that most genes belonged to biological processes. Most annotated peaks belonged to metabolite interconversion, RNA metabolism, transporter, protein modifying, defense/immunity, membrane traffic protein, transmembrane signal receptor, and transcriptional regulator protein families. Further, we identified significant peaks associated with TFs, hormones, signaling, fatty acid and carbohydrate metabolism, and secondary metabolites. qRT-PCR analysis revealed the relative expressions of six abiotic stress-responsive genes (transketolase, chromatin remodeling factor-CDH3, fatty-acid desaturase A, transmembrane protein 14C, beta-amylase 1, and integrase-type DNA binding protein genes) that were significantly (P < 0.05) marked during drought, heat, and combined stresses by comparing stress-induced against un-stressed and input controls. Conclusion: Our study provides a comprehensive and reproducible epigenomic analysis of drought, heat, and combined stress responses in switchgrass. Significant enrichment of H3K4me3 peaks downstream of the TSS of protein-coding genes was observed. In addition, the cost-effective experimental design, modified ChIP-Seq approach, and analyses presented here can serve as a prototype for other non-model plant species for conducting stress studies.

59 BASIC BIOLOGICAL SCIENCES↗

White Dwarf Binaries across the H-R Diagram

We created the APOGEE-GALEX-Gaia catalog to study white dwarf (WD) binaries. This database aims to create a minimally biased sample of WD binary systems identified from a combination of GALEX, Gaia, and APOGEE data to increase the number of WD binaries with orbital parameters and chemical compositions. We identify 3414 sources as WD binary candidates, with nondegenerate companions of spectral types between F and M, including main-sequence stars, main-sequence binaries, subgiants, sub-subgiants, red giants, and red clump stars. Among our findings are (a) a total of 1806 systems having inferred WD radii R < 25 R ⊕ , which constitute a more reliable group of WD binary candidates within the main sample; (b) a difference in the metallicity distribution function between WD binary candidates and the control sample of most luminous giants (M H < -3.0); (c) the existence of a population of sub-subgiants with WD companions; (d) evidence for shorter periods in binaries that contain WDs compared to those that do not, as shown by the cumulative distributions of APOGEE radial velocity shifts; (e) evidence for systemic orbital evolution in a sample of 252 WD binaries with orbital periods, based on differences in the period distribution between systems with red clump, main-sequence binary, and sub-subgiant companions and systems with main-sequence or red giant companions; and (f) evidence for chemical enrichment during common envelope (CE) evolution, shown by lower metallicities in wide WD binary candidates (P > 100 days) compared to post-CE (P < 100 days) WD binary candidates.

79 ASTRONOMY AND ASTROPHYSICS↗

In-Situ Oxygen Isotopic Composition of Tagish Lake: An Ungrouped Type 2 Carbonaceous Chondrite

We have measured the oxygen isotopic composition of several components of Tagish Lake by ion microprobe. This meteorite constitutes the best preserved sample of C2 matter presently available for study. It presents two different lithologies (carbonate-poor and -rich) which have fairly comparable oxygen isotopic composition, with regard to both the primary or secondary minerals. For the olivine and pyroxene grains, their delta O-18 values range from - 10.5% to + 7.4% in the carbonate-poor lithology, with a mean Delta O-17 value of - 3.7 2.4%. In the carbonate-rich lithology, delta O-18 varies from - 7.9% to + 3.3%, and the mean Delta O-17 value is - 4.7 +/- 1.4%. Olivine inclusions (Fo(sub >99)) with extreme O-16-enrichment were found in both lithologies: delta O-18 = - 46.1 %, delta O-187= - 48.3% and delta O-18 = - 40.6%, delta O-17 = - 41.2% in the carbonate-rich lithology; delta O-18 = - 41.5%, delta O-17 = -43.4%0 in the carbonate-poor lithology. Anhydrous minerals in the carbonate-poor lithology are slightly more O-16-rich than in the carbonate-rich one. Four low-iron manganese-rich (LIME) olivine grains do not have an oxygen isotopic composition distinct from the other "normal" olivines. The phyllosilicate matrix presents the same range of oxygen isotopic compositions in both lithologies: delta O-18 from approximately 11 % to approximately 6%, with an average Delta. O-17 approximately 0%. Because the bulk Tagish Lake oxygen isotopic composition given by Brown et al. is on the high end of our matrix analyses, we assume that this "bulk Tagish Lake" composition probably only represents that of the carbonate-rich lithology. Calcium carbonates have delta O-18 values up to 35%, with Delta O-17 approximately 0.5%0. Magnetite grains present very high Delta O-17 values approximately + 3.4%0 +/- 1.2%. Given our analytical uncertainties and our limited carbonate data, the matrix and the carbonate seem to have formed in isotopic equilibrium. In that case, their large isotopic fractionation would argue for a low temperature (CM-like, T approximately 0 deg) formation. Magnetite probably formed during a separate event. Tagish Lake magnetite data is surprisingly compatible with that of R-chondrites and unequilibrated ordinary (LL3) chondrites. Our oxygen isotope data strongly supports the hypothesis of a single precursor for both lithologies. Drastic mineralogical changes between the two lithologies not being accompanied with isotopic fractionation seem compatible with the alteration model presented by Young et aI. Tagish Lake probably represents the first well preserved large sample of the C2 matter that dominates interplanetary matter since the formation of the solar system.

Zolensky, Michael E.↗

Enhancing Research Reactor Safeguards Through the Use of Mailbox Declarations

There are historic examples in several States of research reactors being misused to produce undeclared nuclear material. However, misuse of a State’s research reactor has typically only been discovered after further investigation into the State’s non-compliance related to other undeclared activities. Light water research reactors are typically designed with sample irradiation ports, where the introduction of fertile material can illicitly produce fissile material. Additionally, some light water reactors continue to be fueled by highly enriched uranium, which is a more significant safeguards concern by the International Atomic Energy Agency (IAEA). Heavy water and graphite reactors can be used for illicit plutonium production, which is of particular proliferation concern. Because research reactors are designed for flexible operations and small research reactors are less frequently inspected by the IAEA than other nuclear facilities (depending on power and fuel type, it could several years between inspections), the likelihood of timely detection by the IAEA of misuse of the research reactor is low. During a 2013 workshop on safeguarding research reactors, the United States, France, and the United Kingdom made recommendations to the IAEA on how safeguards could be strengthened for such facilities. One of the recommendations was to assess the use of “mailbox” declarations coupled with short notice random inspections or unannounced inspections by the IAEA at research reactors. An electronic mailbox declaration refers to the use of a secure information repository into which an operator submits operating reports. The near real time submittal of information enables the IAEA to better implement randomized short notice inspections. These mailboxes are not used for collecting and submitting State reports to the IAEA, but for collecting and transmitting operator data. The use of mailboxes, in conjunction with short notice random inspections, is in routine use for some other facility types. This paper assesses the potential for the practical application of mailbox declarations for various research reactor types and how the approach could be effectively used. Potential diversion scenarios are described and operator data records are discussed in connection to mailbox declarations, including discussion of how the data could indicate research reactor misuse.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

The South/Southeast Asia Research Initiative (SARI) Update and Meeting Objectives

Land Use/Cover Change (LU/CC) is one of the most important types of environmental change in South and Southeast Asian countries. Several studies suggest that LU/CC in these countries is in large part driven by population growth and economic development. In the region, changes that are most common include urban expansion, agricultural land loss, land abandonment, deforestation, logging, reforestation, etc. To address the research needs and priorities in the region, a regional initiative entitled South Southeast Asia Regional Initiative (SARI) has been developed involving US and regional scientists. The initiative is funded by NASA Land Cover, Land Use Change program. The goal of SARI is to integrate state-of-the-art remote sensing, natural sciences, engineering and social sciences to enrich LU/CC science in South Southeast Asian countries. In the presentation, LU/CC change research in SARI countries will be highlighted including the drivers of change. For example, in South Asia, forest cover has been increasing in countries like India, Nepal and Bhutan due to sustainable afforestation measures; whereas, large-scale deforestation in Southeast Asian countries is still continuing, due to oil palm plantation expansion driven by the international market demand in Malaysia and Indonesia. With respect to urbanization, South and Southeast Asian countries contain 23 megacities, each with more than 10 million people. Rapid urbanization is driving agricultural land loss and agricultural intensification has been increasing due to less availability of land for growing food crops such as in India, Vietnam, and Thailand. The drivers of LUCC vary widely in the region and include such factors as land tenure, local economic development, government policies, inappropriate land management, land speculation, improved road networks, etc. In addition, variability in the weather, climate, and socioeconomic factors also drive LU/CC resulting in disruptions of biogeochemical cycles, radiation and the surface energy balance of the atmosphere. The presentation will also highlight SARI collaborative activities with space agencies, universities and non-government organizations including data sharing mechanisms in the region.

Research↗

Impact of Fixed Nitrogen Availability on Dehalococcoides mccartyi Reductive Dechlorination Activity

Biostimulation to promote reductive dechlorination is widely practiced, but the value of adding an exogenous nitrogen (N) source (e.g., NH 4 + ) during treatment is unclear. This study investigates the effect of NH 4 + availability on organohalide-respiring Dehalococcoides mccartyi (Dhc) growth and reductive dechlorination in enrichment cultures derived from groundwater (PW4) and river sediment (TC) impacted with chlorinated ethenes. In PW4 cultures, the addition of NH 4 + increased cis-1,2-dichloroethene (cDCE)-to-ethene dechlorination rates about 5-fold (20.6 ± 1.6 versus 3.8 ± 0.5 μM Cl – d -1 ), and the total number of Dhc 16S rRNA gene copies were about 43-fold higher in incubations with NH 4 + ((1.8 ± 0.9) × 10 8 mL –1 ) compared to incubations without NH 4 + ((4.1 ± 0.8) × 10 7 mL –1 ). In TC cultures, NH 4 + also stimulated cDCE-to-ethene dechlorination and Dhc growth. Quantitative polymerase chain reaction (qPCR) revealed that Cornell-type Dhc capable of N 2 fixation dominated PW4 cultures without NH 4 + , but their relative abundance decreased in cultures with NH 4 + amendment (i.e., 99 versus 54% of total Dhc). Pinellas-type Dhc incapable of N 2 fixation were responsible for cDCE dechlorination in TC cultures, and diazotrophic community members met their fixed N requirement in the medium without NH 4 + . Responses to NH 4 + were apparent at the community level, and N 2 -fixing bacterial populations increased in incubations without NH 4 + . Quantitative assessment of Dhc nitrogenase genes, transcripts, and proteomics data linked Cornell-type Dhc nifD and nifK expression with fixed N limitation. NH 4 + additions also demonstrated positive effects on Dhc in situ dechlorination activity in the vicinity of well PW4. Finally, these findings demonstrate that biostimulation with NH 4 + can enhance Dhc reductive dechlorination rates; however, a “do nothing” approach that relies on indigenous diazotrophs can achieve similar dechlorination end points and avoids the potential for stalled dechlorination due to inhibitory levels of NH 4 + or transformation products (i.e., nitrous oxide).

59 BASIC BIOLOGICAL SCIENCES↗

Analysis of Tank 38H (HTF-38-22-91, -92) and Tank 43H (HTF-43-22-93, -94) Samples for Support of the Enrichment Control and Corrosion Control Programs

SRNL analyzed samples from Tank 38H and Tank 43H to support ECP and CCP. The results indicate the concentrations of most soluble species in the Tank 38H surface sample increased slightly from the previous surface sample. The Tank 38H sub-surface sample shows changes in concentration for soluble species in the solution with some increasing and some decreasing. The current Tank 38H sub-surface sample contains more sludge solids than the previous sample based on visual appearance. The small differences in the concentrations of major components between the Tank 38H surface and sub-surface samples indicate only minimal stratification of solution species within the tank. The Tank 43H surface and sub-surface samples are similar in composition to the previous samples. The similar solution compositions measured in the Tank 43H surface and sub-surface samples indicate a minimal stratification within the tank. The total uranium and plutonium in the current Tank 38H surface sample remains similar to the previous analysis. The Tank 38H sub-surface sample shows an increase in uranium and plutonium concentrations compared to the previous sample likely because of an increase in sludge solids in the current sample. The total uranium concentration in the two Tank 43H samples is essentially unchanged from previous sample results. The plutonium concentration in the Tank 43H surface sample is similar to the previous sample results while the plutonium in the Tank 43H sub-surface sample increased relative to the previous analysis. The sum of the major cations versus the sum of the major anions shows a difference of <10% for both samples from Tank 38H and for both samples from Tank 43H providing an indication of good data quality for the non-radioactive analytes in the samples. The silicon concentrations measured in the Tank 38H sub-surface sample increased compared with the previous sample results likely due to the presence of more sludge solids in the current sample. The Tank 38H surface sample silicon concentrations is similar to the previous sample results. The Tank 43H surface and sub-surface sample silicon concentrations both increased compared to the previous sample results. The samples analyzed from Tanks 38H and 43H show silicon concentrations ranging from 61.5 to 97.3 mg/L.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

A New Spin for Understanding the Peculiar Horizontal Branch Morphology of the Galactic Globular Clusters NGC 6388 and NGC 6441

In this paper we present multiband optical and UV Hubble Space Telescope photometry of the two Galactic globular clusters NGC 6388 and NGC 6441 Aims. We investigate the properties of their anomalous horizontal branches (HB) in different photometric planes in order to shed light on the nature of the physical mechanism(s) responsible for the existence of an extended HB blue tail, and of a slope in the HB, visible in all the color-magnitude diagrams. Methods. New photometric data have been collected and carefully reduced. Empirical data have been compared with updated stellar models of low-mass, metal-rich, He-burning structures, transformed to the observational plane with appropriate atmosphere models. Results. We have obtained the first UV color-magnitude diagrams for NGC 6388 and NGC 6441. These diagrams confirm previous results, obtained in optical bands, about the presence of a sizeable stellar population of extremely hot Horizontal Branch stars. At least in NGC 6388, we find a clear indication that at the hot end of the horizontal branch the distribution of stars forms a hook-like feature, closely resembling those observed in NGC 2808 and w Centauri. We briefly review the theoretical scenarios which have been suggested for interpreting this observational feature. We investigate also on the tilt in the horizontal branch morphology, and provide further evidence that supports early suggestions according to which this feature cannot be interpreted as an effect of differential reddening or radiative levitation, though these effects contribute to create the anomaly. We demonstrate that a possible solution of the puzzle is to assume that a small fraction (approx. 13% in NGC 6388 and approx. 8% NGC 6441) of the stellar population in the two clusters is strongly helium enriched (Y approx. 0.40 in NGC6388 and Y approx. 0.35 in NGC 6441). This solution necessarily implies the presence of a double generation of stars in the two clusters.

Busso, G.↗

Integration of Omics into a New Comprehensive Rate Law for Competitive Terminal Electron-Accepting Processes in Reactive Transport Models: Application to N, Fe, S, and Contaminant Transformations in Stream and Wetland Sediments

Surface waters represent important sources of alternate energy and drinking water in the United States, and characterizing the biogeochemical processes that affect surface water quality is relevant to the DOE-BER mission. Sediment biogeochemical processes regulate the release of carbon (C), nutrients, and contaminants to surface waters and thus influence water quality. Sediment biogeochemical processes are dynamic and affected by the deposition and remobilization of solid material and changes in environmental conditions driven by water discharge variations. Wetlands are important natural filters of surface waters which may either trap, metabolize, or mobilize nutrients and contaminants. Despite their importance, biogeochemical processes regulating nutrient and contaminant release and C transformation in stream and wetland sediments cannot be predicted accurately by current mathematical models. These reactive transport models largely rely on detectable changes in geochemical conditions to activate metabolic processes, do not accurately account for the competition between microbial processes, and poorly constrain effects of hydrological perturbations on biogeochemical processes. In this BER-SBR exploratory project, metagenomic and geochemical signatures were combined to identify microbially-mediated redox processes in anaerobic stream and wetland sediments from the Savannah River Site (SRS, ANL SFA) and East Fork Poplar Creek (EFPC, ORNL SFA) that play important roles in C, uranium (U), and mercury (Hg) transformations. In addition, sediment incubations were conducted to examine the competition between anaerobic respiration processes Finally, new rate laws were developed for reactive transport models that rely on complementary metagenomic and geochemical signatures to identify the underlying anaerobic microbial processes in stream and wetland sediments, describe the competition between the dominant metabolic processes involved in nutrient release and U and Hg mobilization, and more accurately quantify carbon transformation and the response of microbial processes to changes in redox conditions associated with hydrological forcing. These rate laws were optimized in batch reactors with SRS wetland sediments, where iron and sulfate reduction dominate. Anaerobic carbon remineralization processes followed the expected thermodynamic sequence of microbial respiration with depth in both sediments, except that geochemical signals indicated that sulfate reduction was inactive in EFPC sediments and moderate in SRS wetland sediments. Estimates indicated that microbial iron reduction contributed to at least half of the production of reduced iron in these sediments. Incubations demonstrated that nitrate reduction, denitrification, and dissimilatory nitrate reduction to ammonium were active in the natural EFPC sediment and activated upon nitrate amendment in these nitrate-rich sediments. In turn, these processes were outcompeted by the addition of either iron oxides or sulfate as alternative terminal electron acceptors. Although geochemical products of sulfate reduction were not detected in the incubations, the abundance of sulfate reduction genes increased with depth in the sediment and was equally more pronounced in treatments amended with either iron oxides or sulfate. Simultaneously, anaerobic sulfide oxidizing bacteria coupling sulfide oxidation to DNRA (and not conventional denitrification) were apparently enriched over time, regardless of the treatments. These findings indicate that sulfate reduction is important in freshwater stream sediments and probably catalyzed by a cryptic sulfur cycle involving nitrogen species, in which the sulfur products from sulfate reduction are immediately removed by side reactions and not detectable by geochemical measurements alone. Similar experiments in SRS sediments, however, demonstrated little interaction between nitrogen and sulfur cycling microorganisms. Sulfate reduction was impacted by the addition of more thermodynamically favorable electron acceptors, suggesting either that iron-reducing microorganisms outcompeted sulfate-reducing microorganisms for organic substrate, depleting the stock of electron donor available for sulfate reduction, or that the cryptic sulfur cycle was shunted by the precipitation of FeS generated as a result of the abiotic reduction of iron oxides by dissolved sulfide. A diagnostic modeling exercise was conducted to further investigate the competition between terminal electron accepting processes. As conventional kinetic models typically do not account for cryptic cycles and used inaccurate formulations to describe competition between microbial communities, new metabolic rate laws were developed that explicitly express the electron acceptor-specific enzyme of each energetically favorable metabolic process based on gene abundance detected in the incubations. The model was tested with the sediment slurry incubation data to determine whether substrate competition could explain the decrease in sulfate reduction observed in the presence of iron oxide competitor. The model was able to reproduce geochemical concentrations really well in each treatment once the model was calibrated with the unamended control, suggesting that microbial competition was indeed driven by thermodynamic considerations. Overall, carbon remineralization processes and rates will be reproduced much more realistically with the new metabolic rate laws.

54 ENVIRONMENTAL SCIENCES↗

Preliminary Analysis: Am-241 RHU/TEG Electric Power Source for Nanosatellites

The Februay 2013 Space Works Commercial report indicates a strong increase in nano/microsatellite (1-50 kg) launch demand globally in future years. Nanosatellites (NanoSats) are small spacecraft in the 1-10 kg range, which present a simple, low-cost option for developing quickly-deployable satellites. CubeSats, a special category of NanoSats, are even being considered for interplanetary missions. However, the small dimensions of CubeSats and the limited mass of the NanoSat class in general place limits of capability on their electrical power systems (especially where typical power sources such as solar panels are considered) and stored energy reserves; restricting the power budget and overall functionality. For example, leveraging NanoSat clusters for computationally intensive problems that are solved collectively becomes more challenging with power related restrictions on communication and data-processing. Further, interplanetary missions that would take NanoSats far from the sun, make the use of solar panels less effective as a power source as their required area would become quite large. To overcome these limitations, americium 241 (Am-241) has been suggested as a low power source option. The Idaho National Laboratory, Center for Space Nuclear Research reports that:  (Production) requires small quantities of isotope - 62.5 g of Pu-238; 250 g Am- 241 (for 5 We); Am-241 is available at around 1 kg/yr commercially; Am-241 produces 59 kev gammas which are stopped readily by tungsten so the radiation field is very low. Whereby, an Am-241 source could be placed in among the instruments and the waste heat used to heat the platform; and  amounts of isotope are so low that launch approval may be easier, especially with tungsten encapsulation. As further reported, Am-241 has a half-life that is approximately five times greater than that of Pu- 238 and it has been determined that the neutron yield of a 241-AmO(sub 2) source is approximately an order of magnitude lower than that of a 238-PuO(sub 2) source of equal mass and degree of (sup 16)O enrichment. Also it has been demonstrated that shielded heat sources fuelled by oxygen-enriched 238-PuO(sub 2) have masses that are up to 10 times greater than those fuelled by oxygenenriched 241-AmO(sub 2) with equivalent thermal power outputs and neutron dose rates at 1 m radii. For these reasons, Am-241 is well suited to missions that demand long duration electrical power output, such as deep spaceflight missions and similar missions that use radiation-hard electronics and instrumentation that are less susceptible to neutron radiation damage.

Robertson, Glen A.↗

Computational Thermal Hydraulics of a High-Performance Low-Enriched-Uranium Annular Target for HFIR Irradiation

Molybdenum-99 has historically been generated via isolation from fissioned highly enriched uranium (HEU) targets. Here, this isotope is in high demand due to its daily use across the world in radiopharmaceutical medical procedures. The primary objective of this work was to design and analyze an experimental target assembly containing one low-enriched-uranium (LEU) annular target for irradiation at the High Flux Isotope Reactor (HFIR). Efforts included incorporating spatially dependent energy sources from neutron and gamma interactions, quantifying thermal contact conductance at material interfaces, performing grid-independent studies, comparing turbulence models, and simulating various steady-state and transient scenarios relevant for irradiation qualification and eventual insertion. These models provide velocity, pressure, and temperature distributions in both space and time. Such results enable the selection of an appropriate irradiation location, fission rate density, and flow-limiting orifice size and demonstrate compliance with HFIR safety requirements such that insertion into the reactor can be approved. This analysis shows that across all scenarios, wetted surface temperatures remain below the coolant saturation temperature with no net vapor formation in the coolant. In every scenario, all components stay below 30% of the aluminum 6061 melting temperature. Computational fluid dynamics and system-level models predict peak target temperatures that agree within 4%, though the predicted axial location of the peak differs by about 10% of the heated length due to differences in flow development length. These results de-risk the irradiation of LEU (annular targets) and strengthen a domestic, HEU-independent 99 Mo supply by providing important fuel performance data to form the foundation for a robust licensing basis.

Molybdenum-99↗

Analysis of Igniter/Promoter Material Effects on Burn Length Variability in Astm G124 Standard Testing

ASTM G124 refers to the “Standard Test Method for Determining the Combustion Behavior of Metallic Materials in Oxygen Enriched Atmospheres”. Major test parameters are well defined in the standard and a detailed description of how to set up and conduct the test is also included. However, one variable - the igniter/promoter system - is not clearly restricted or specified. Due to the fact that this igniter/promoter system is not definitively specified, multiple materials have been used. This lack of specificity in igniter/promoter material was identified as a potential source of variability in test results, and as such has been selected for this study as a parameter to analyze and identify if the igniters/promoters should be standardized. For that purpose, several igniter/promoter systems have been selected (that were currently in use at various laboratories) which would be tested via ASTM G124 with Inconel 718 test rods. Testing was conducted over two phases – the first for screening promoter effects in the transition region of the material, and the second for comparing measured flammability thresholds identified through testing by each igniter/promoter type. The results of this study have found that igniter/promoter material is not a statistically significant factor in the variability of burn length in test samples. Initial results showing variability was likely due to small sample size, as the issue became less pronounced once more samples were tested and more data generated. Each of the igniter/promoter systems tested were effective at determining flammability thresholds and so it is concluded that no specific igniter/promoter needs to be identified in the ASTM G124 test standard.

oxygen compatibility↗

Current Progress of the Final Design of a Subcritical Assembly at the Oak Ridge National Laboratory

During the past decade, the US Department of Energy (DOE)/National Nuclear Security Administration (NNSA) Nuclear Criticality Safety Program (NCSP) has been coordinating nuclear criticality safety (NCS) courses to provide training and qualification to new staff, supervisors, managers, regulators, and other professionals involved with NCS. To address the growing need for more NCS training possibilities, a subcritical assembly was designed at Oak Ridge National Laboratory (ORNL). The Oak Ridge Subcritical Assembly (ORSA), operated at ORNL, could be used in a new course for fissile material handlers/operators or as a backup training facility for currently existing NCSP hands-on NCS training. This paper describes some of the design steps necessary for obtaining a final ORSA design, beginning with a successful feasibility study performed in 2020. Numerous parameters within each main element of the assembly were considered, such as the reflector used, the type of fuel coating or plating used, and the number of fuel plates used. The design choices related to each parametric study described in this paper are detailed and justified at the end of each subsection. An overview of the current final design characteristics of ORSA and the experiments’ possibilities is also provided. ORSA will be built with fuel plates from legacy Aerojet General Nucleonics (AGN)-201M research reactors currently stored at the Y-12 National Security Complex (Y-12). The cylindrical fuel plates comprise UO 2 particles embedded in polyethylene and have a nominal enrichment of 19.5 ± 0.5 wt % 235 U. The basis for the final design was the feasibility study from 2020. In the feasibility study, ORSA achieved k eff = 0.95, corresponding to a multiplication factor of 20, with approximately 620 g of 235 U (four 4 cm plates, three 2 cm plates, and two 1 cm plates) and an 8.5 cm thick graphite reflector radially and on top of the assembly. The bottom of the assembly has a graphite thickness of 5 cm, and the chosen graphite density was 2.3 g/cm 3 . All design calculations were performed using SCALE 6.2.4 KENO-VI and with the ENDF/B VII.1 Continuous Energy cross-section library.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Data from Enhanced 2′-Fucosyllactose Production by Engineered Saccharomyces cerevisiae using Xylose as a Co-Substrate

2′-Fucosyllactose (2′-FL), a human milk oligosaccharide with confirmed benefits for infant health, is a promising infant formula ingredient. Although Escherichia coli , Saccharomyces cerevisiae , Corynebacterium glutamicum , and Bacillus subtilis have been engineered to produce 2′-FL, their titers and productivities need be improved for economic production. Glucose along with lactose have been used as substrates for producing 2′-FL, but accumulation of by-products due to overflow metabolism of glucose hampered efficient production of 2′-FL regardless of a host strain. To circumvent this problem, we used xylose, which is the second most abundant sugar in plant cell wall hydrolysates and is metabolized through oxidative metabolism, for the production of 2′-FL by engineered yeast. Specifically, we modified an engineered S. cerevisiae strain capable of assimilating xylose to produce 2′-FL from a mixture of xylose and lactose. First, a lactose transporter (Lac12) from Kluyveromyces lactis was introduced. Second, a heterologous 2′-FL biosynthetic pathway consisting of enzymes Gmd, WcaG, and WbgL from E. coli was introduced. Third, we adjusted expression levels of the heterologous genes to maximize 2′-FL production. The resulting engineered yeast produced 25.5 g/L of 2′-FL with a volumetric productivity of 0.35 g/L∙h in a fed-batch fermentation with lactose and xylose feeding to mitigate the glucose repression. Interestingly, the major location of produced 2′-FL by the engineered yeast can be changed using different culture media. While 72% of the produced 2′-FL was secreted when a complex medium was used, 82% of the produced 2′-FL remained inside the cells when a minimal medium was used. As yeast extract is already used as food and animal feed ingredients, 2′-FL enriched yeast extract can be produced cost-effectively using the 2′-FL-accumulating yeast cells.

Conversion↗

Unveiling the nature of Ga-based chalcogenides for electrical switching selectors

Three-dimensional phase-change memory with stackable crossbar architecture is a promising technology to meet the urgent demands for high-density storage and rapid information processing in the era of explosive data growth. The performance depends strongly on the properties of ovonic threshold switching (OTS) selectors, which control the on/off states of memory units. Amorphous GaS serves as an outstanding OTS material, distinguished by its sizable mobility gap and high crystallization temperature, while the underlying mechanism continues to be inadequately comprehended. Here, in this work, we systematically studied the structural and electronic properties of amorphous Ga-X (X = S/Se/Te) using first-principles calculations. The results show that Ga atoms adopt tetrahedral motifs, while S/Se/Te atoms predominantly exhibit the structure of a distorted triangular pyramid. This structural arrangement is ascribed to the substantial dative bonds formed by the lone-pair electrons of the anions and the vacant sp3 orbitals around Ga atoms. Large mobility gaps (e.g., GaS: 2.43 eV, GaSe: 1.76 eV, GaTe: 1.26 eV) and distinct mid-gap states (e.g., ∼0.66 eV above valence band tail) ensure that these three chalcogenide glasses can be switched on under an external electric field while effectively suppressing leakage current without a bias, and the defect electronic states originate from short, robust Ga-Ga bonds due to the formation of distorted chain-like local structures. Our research elucidates the mechanisms of amorphous Ga-X as OTS materials, enriching the spectrum of electrical switching selectors by incorporating III-VI chalcogenides. This inclusion offers novel opportunities for the refinement and optimization of high-density integrated memory systems.

36 MATERIALS SCIENCE↗

Vegetation Warming Experiment: 15N Uptake Experiment Water-Extractable Soil Nutrients, Utqiagvik (Barrow), Alaska, 2018

This dataset consists of measured water-extractable carbon and nutrients measured on soils collected from warming experiment enclosures and paired control plots. Harvest types include both natural abundance and enriched soils. Vegetation warming chambers (Zero Power) were deployed on the Barrow Environmental Observatory (BEO), Utqiagvik, Alaska. These chambers (Figure 1) consistently elevated air temperatures by approximately 4°C using a self-venting system described by Lewin et al (2017). Five chambers were deployed from June 17, 2018 to September 24, 2018 on the BEO within a 1 km2 area centered on 71.275N, -156.641W. Each chamber was co-located with an ambient plot where temperatures were not manipulated on patches of tundra containing the target species Arctagrostis latifolia. An intensive field campaign in late July investigated the impact of warming had on A. latifolia biomass, chemistry, and uptake of 15N labeled ammonia that was injected into the surface soils for one week. Initial measurements were taken on July 21, 2018. Harvest occurred on July 27, 2018. Water-extractable nutrients in soils were measured in July following harvests of A. latifolia plants and underlying soils. Availability of ammonia, nitrate, and phosphate throughout the growing season was measured by extracting nutrients bound to anion and cation binding resins deployed from July through September. Environmental variables (thaw depth, surface soil temperatures, surface soil moisture) were measured. Leaf traits and root traits of A. latifolia were also measured. The data package includes one *.csv data file and one *.pdf user guide. The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗

Volcanic ash layers in blue ice fields (Beardmore Glacier Area, Antarctica): Iridium enrichments

Dust bands on blue ice fields in Antarctica have been studied and have been identified to originate from two main sources: bedrock debris scraped up from the ground by the glacial movement (these bands are found predominantly at fractures and shear zones in the ice near moraines), and volcanic debris deposited on and incorporated in the ice by large-scale eruptions of Antarctic (or sub-Antractic) volcanoes. Ice core studies have revealed that most of the dust layers in the ice cores are volcanic (tephra) deposits which may be related to some specific volcanic eruptions. These eruptions have to be related to some specific volcanic eruptions. These eruptions have to be relatively recent (a few thousand years old) since ice cores usually incorporate younger ice. In contrast, dust bands on bare blue ice fields are much older, up to a few hundred thousand years, which may be inferred from the rather high terrestrial age of meteorites found on the ice and from dating the ice using the uranium series method. Also for the volcanic ash layers found on blue ice fields correlations between some specific volcanoes (late Cenozoic) and the volcanic debris have been inferred, mainly using chemical arguments. During a recent field expedition samples of several dust bands found on blue ice fields at the Lewis Cliff Ice Tongue were taken. These dust band samples were divided for age determination using the uranium series method, and chemical investigations to determine the source and origin of the dust bands. The investigations have shown that most of the dust bands found at the Ice Tongue are of volcanic origin and, for chemical and petrological reasons, may be correlated with Cenozoic volcanoes in the Melbourne volcanic province, Northern Victoria Land, which is at least 1500 km away. Major and trace element data have been obtained and have been used for identification and correlation purposes. Recently, some additional trace elements were determined in some of the dust band samples, including Ir. Iridium determinations were made using INAA, with synthetical and natural (meteorite) standards. These findings are discussed.

Koeberl, Christian↗