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At least 1,423 records · Page 79

Single-Cell Analysis Using Hyperspectral Imaging Modalities

Almost a decade ago, hyperspectral imaging (HSI) was employed by the NASA in satellite imaging applications such as remote sensing technology. This technology has since been extensively used in the exploration of minerals, agricultural purposes, water resources, and urban development needs. Due to recent advancements in optical re-construction and imaging, HSI can now be applied down to micro- and nanometer scales possibly allowing for exquisite control and analysis of single cell to complex biological systems. Here this short review provides a description of the working principle of the HSI technology and how HSI can be used to assist, substitute, and validate traditional imaging technologies. This is followed by a description of the use of HSI for biological analysis and medical diagnostics with emphasis on single-cell analysis using HSI.

spectral angle mapping↗

Wavelet Analysis of Satellite Images for Coastal Watch

The two-dimensional wavelet transform is a very efficient bandpass filter, which can be used to separate various scales of processes and show their relative phase/location. In this paper, algorithms and techniques for automated detection and tracking of mesoscale features from satellite imagery employing wavelet analysis are developed. The wavelet transform has been applied to satellite images, such as those from synthetic aperture radar (SAR), advanced very-high-resolution radiometer (AVHRR), and coastal zone color scanner (CZCS) for feature extraction. The evolution of mesoscale features such as oil slicks, fronts, eddies, and ship wakes can be tracked by the wavelet analysis using satellite data from repeating paths. Several examples of the wavelet analysis applied to various satellite Images demonstrate the feasibility of this technique for coastal monitoring.

Liu, Antony K.↗

Four dimensional reconstruction and analysis of plume images

A number of methods have been investigated and are under current investigation for monitoring the health of the Space Shuttle Main Engine (SSME). Plume emission analysis has recently emerged as a potential technique for correlating the emission characteristics with the health of an engine. In order to correlate the visual and spectral signatures of the plume emission with the characteristic health monitoring features of the engine, the plume emission data must be acquired, stored, and analyzed in a manner similar to flame emission spectroscopy. The characteristic visual and spectral signatures of the elements vaporized in exhaust plume along with the features related to their temperature, pressure, and velocity can be analyzed once the images of plume emission are effectively acquired, digitized, and stored on a computer. Since the emission image varies with respect to time at a specified planar location, four dimensional visual and spectral analysis need to be performed on the plume emission data. In order to achieve this objective, feasibility research was conducted to digitize, store, analyze, and visualize the images of a subsonic jet in a cross flow. The jet structure was made visible using a direct injection flow visualization technique. The results of time-history based three dimensional reconstruction of the cross sectional images corresponding to a specific planar location of the jet structure are presented. The experimental set-up to acquire such data is described and three dimensional displays of time-history based reconstructions of the jet structure are discussed.

Dhawan, Atam P.↗

Automated analysis of hot spot X-ray images at the National Ignition Facility

At the National Ignition Facility, the symmetry of the hot spot of imploding capsules is diagnosed by imaging the emitted x-rays using gated cameras and image plates. The symmetry of an implosion is an important factor in the yield generated from the resulting fusion process. The x-ray images are analyzed by decomposing the image intensity contours into Fourier and Legendre modes. This paper focuses on the additional protocols for the time-integrated shape analysis from image plates. For implosions with temperatures above ∼4 keV, the hard x-ray background can be utilized to infer the temperature of the hot spot.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Ringed impact craters on Venus: An analysis from Magellan images

We have analyzed cycle 1 Magellan images covering approximately 90 percent of the venusian surface and have identified 55 unequivocal peak-ring craters and multiringed impact basins. This comprehensive study (52 peak-ring craters and at least 3 multiringed impact basins) complements our earlier independent analysis of Arecibo and Venera images and initial Magellan data and that of the Magellan team.

Alexopoulos, Jim S.↗

Feasibility of using computed tomography texture analysis parameters as imaging biomarkers for predicting risk grade of gastrointestinal stromal tumors: comparison with visual inspection

Purpose: To evaluate the feasibility of using computed tomography texture analysis (CTTA) parameters for predicting malignant risk grade and mitosis index of gastrointestinal stromal tumors (GISTs), compared with visual inspection. Method and materials: CTTA was performed on portal phase CT images of 145 surgically confirmed GISTs (mean size: 42.9 ± 37.5 mm), using TexRAD software. Mean, standard deviation, entropy, mean of positive pixels (MPP), skewness, and kurtosis of CTTA parameters, on spatial scaling factor (SSF), 2–6 were compared by risk grade, mitosis rate, and the presence or absence of necrosis on visual inspection. CTTA parameters were correlated with risk grade. Diagnostic performance was evaluated with receiver operating characteristic curve analysis. Enhancement pattern, necrosis, heterogeneity, calcification, growth pattern, and mucosal ulceration were subjectively evaluated by two observers. Results: Three to four parameters at different scales were significantly different according to the risk grade, mitosis rate, and the presence or absence of necrosis (p < 0.041). MPP at fine or medium scale (r = − 0.547 to − 393) and kurtosis at coarse scale (r = 0.424–0.454) correlated significantly with risk grade (p < 0.001). HG-GIST was best differentiated from LG-GIST by MPP at SSF 2 (AUC, 0.782), and kurtosis at SSF 4 (AUC, 0.779) (all p < 0.001). CT features predictive of HG-GIST were density lower than or equal to that of the erector spinae muscles on enhanced images (OR 2.1; p = 0.037; AUC, 0.59), necrosis (OR, 6.1; p < 0.001; AUC, 0.70), heterogeneity (OR, 4.3; p < 0.001; AUC, 0.67), and mucosal ulceration (OR, 3.3; p = 0.002; AUC, 0.62). Conclusion: Using TexRAD, MPP and kurtosis are feasible in predicting risk grade and mitosis index of GISTs. CTTA demonstrated meaningful accuracy in preoperative risk stratification of GISTs.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

SU-C-304-04: A Compact Modular Computational Platform for Automated On-Board Imager Quality Assurance

Purpose: Traditionally, the assessment of X-ray tube output and detector positioning accuracy of on-board imagers (OBI) has been performed manually and subjectively with rulers and dosimeters, and typically takes hours to complete. In this study, we have designed a compact modular computational platform to automatically analyze OBI images acquired with in-house designed phantoms as an efficient and robust surrogate. Methods: The platform was developed as an integrated and automated image analysis-based platform using MATLAB for easy modification and maintenance. Given a set of images acquired with the in-house designed phantoms, the X-ray output accuracy was examined via cross-validation of the uniqueness and integration minimization of important image quality assessment metrics, while machine geometric and positioning accuracy were validated by utilizing pattern-recognition based image analysis techniques. Results: The platform input was a set of images of an in-house designed phantom. The total processing time is about 1–2 minutes. Based on the data acquired from three Varian Truebeam machines over the course of 3 months, the designed test validation strategy achieved higher accuracy than traditional methods. The kVp output accuracy can be verified within +/−2 kVp, the exposure accuracy within 2%, and exposure linearity with a coefficient of variation (CV) of 0.1. Sub-millimeter position accuracy was achieved for the lateral and longitudinal positioning tests, while vertical positioning accuracy within +/−2 mm was achieved. Conclusion: This new platform delivers to the radiotherapy field an automated, efficient, and stable image analysis-based procedure, for the first time, acting as a surrogate for traditional tests for LINAC OBI systems. It has great potential to facilitate OBI quality assurance (QA) with the assistance of advanced image processing techniques. In addition, it provides flexible integration of additional tests for expediting other OBI quality assurance tests, such as 2D/3D image quality, making completely automated QA possible. Research Funding from Varian Medical Systems Inc. . Dr. Sasa Mutic receives compensation for providing patient safety training services from Varian Medical Systems, the sponsor of this study.

60 APPLIED LIFE SCIENCES↗

Knowledge based imaging for terrain analysis

A planetary rover will have various vision based requirements for navigation, terrain characterization, and geological sample analysis. In this paper we describe a knowledge-based controller and sensor development system for terrain analysis. The sensor system consists of a laser ranger and a CCD camera. The controller, under the input of high-level commands, performs such functions as multisensor data gathering, data quality monitoring, and automatic extraction of sample images meeting various criteria. In addition to large scale terrain analysis, the system's ability to extract useful geological information from rock samples is illustrated. Image and data compression strategies are also discussed in light of the requirements of earth bound investigators.

Holben, Rick↗

Modulation-transfer-function analysis for sampled image systems

Sampling generally causes the response of a digital imaging system to be locally shift-variant and not directly amenable to Modulation Transfer Function (MTF) analysis. However, this paper demonstrates that a meaningful system response can be calculated by averaging over an ensemble of point-source system inputs to yield an MTF which accounts for the combined effects of image formation, sampling, and image reconstruction. As an illustration, the MTF of the Landsat MSS system is analyzed to reveal an average effective instantaneous field of view which is significantly larger than the commonly accepted value, particularly in the along-track direction where undersampling contributes markedly to an MTF reduction and resultant increase in image blur.

Park, S. K.↗

Deep learning methods for event verification and image re-purposing detection

Systems and methods herein describe accessing an image, generating a resized image, generating an image feature vector by applying an image classification neural network to the resized image, generating analysis of the image by processing the image feature vector using a machine-learning classifier trained to analyze the image feature vector, and based on the analysis, determining an event that is attributed to the image.

Nataraj, Lakshmanan↗

Wavelet Analysis of SAR Images for Coastal Monitoring

The mapping of mesoscale ocean features in the coastal zone is a major potential application for satellite data. The evolution of mesoscale features such as oil slicks, fronts, eddies, and ice edge can be tracked by the wavelet analysis using satellite data from repeating paths. The wavelet transform has been applied to satellite images, such as those from Synthetic Aperture Radar (SAR), Advanced Very High-Resolution Radiometer (AVHRR), and ocean color sensor for feature extraction. In this paper, algorithms and techniques for automated detection and tracking of mesoscale features from satellite SAR imagery employing wavelet analysis have been developed. Case studies on two major coastal oil spills have been investigated using wavelet analysis for tracking along the coast of Uruguay (February 1997), and near Point Barrow, Alaska (November 1997). Comparison of SAR images with SeaWiFS (Sea-viewing Wide Field-of-view Sensor) data for coccolithophore bloom in the East Bering Sea during the fall of 1997 shows a good match on bloom boundary. This paper demonstrates that this technique is a useful and promising tool for monitoring of coastal waters.

Liu, Antony K.↗

Heat Flux Analysis From IR Imaging on Proto-MPEX

The Prototype Material Plasma Exposure eXperiment (Proto-MPEX) is a linear device used to develop the source and heating concept for MPEX, an experiment to study plasma–material interactions for future fusion reactors. This paper highlights recent analysis and results on Proto-MPEX using an infrared (IR) camera, a key tool for imaging heat fluxes measured at the material target. The target heat fluxes are crucial to understanding the source and heating concepts. The recent analysis includes the application of homography and 3-D finite-element methods to provide between-shot measurements of the 2-D target heat flux profile. The IR camera inferred heat flux is shown to correlate with Langmuir probe inferred heat fluxes for a range of parameters in helicon only and helicon + electron cyclotron heated discharges. Results show both desirable central and undesirable edge heat flux for helicon source and electron heating on the target. These heat flux measurements are shown to be important for better understanding of the source and heating physics.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Analysis of Particle Image Velocimetry (PIV) Data for Acoustic Velocity Measurements

Acoustic velocity measurements were taken using Particle Image Velocimetry (PIV) in a Normal Incidence Tube configuration at various frequency, phase, and amplitude levels. This report presents the results of the PIV analysis and data reduction portions of the test and details the processing that was done. Estimates of lower measurement sensitivity levels were determined based on PIV image quality, correlation, and noise level parameters used in the test. Comparison of measurements with linear acoustic theory are presented. The onset of nonlinear, harmonic frequency acoustic levels were also studied for various decibel and frequency levels ranging from 90 to 132 dB and 500 to 3000 Hz, respectively.

Blackshire, James L.↗

Properties of Rubble-Pile Asteroid (101955) Bennu from OSIRIS-REx Imaging and Thermal Analysis

Establishing the abundance and physical properties of regolith and boulders on asteroids is crucial for understanding the formation and degradation mechanisms at work on their surfaces. Using images and thermal data from NASA's Origins, Spectral Interpretation, Resource Identification, and Security-Regolith Explorer (OSIRIS-REx) spacecraft, we show that asteroid (101955) Bennu's surface is globally rough, dense with boulders, and low in albedo. The number of boulders is surprising given Bennu's moderate thermal inertia, suggesting that simple models linking thermal inertia to particle size do not adequately capture the complexity relating these properties. At the same time, we find evidence for a wide range of particle sizes with distinct albedo characteristics. Our findings imply that ages of Bennu's surface particles span from the disruption of the asteroid's parent body (boulders) to recent in situ production (micrometre-scale particles).

DellaGiustina, D. N.↗

Image segmentation for uranium isotopic analysis by SIMS: Combined adaptive thresholding and marker controlled watershed approach

A novel approach to particle identification and particle isotope ratio determination has been developed for nuclear safeguard applications. This particle search approach combines an adaptive thresholding algorithm and marker-controlled watershed segmentation (MCWS) transform, which improves the secondary ion mass spectrometry (SIMS) isotopic analysis of uranium containing particle populations for nuclear safeguards applications. The Niblack assisted MCWS approach (a.k.a. SEEKER) developed for this work has improved the identification of isotopically unique uranium particles under conditions that have historically presented significant challenges for SIMS image data processing techniques. Particles obtained from five NIST uranium certified reference materials (CRM U129A, U015, U150, U500 and U850) were successfully identified in regions of SIMS image data 1) where a high variability in image intensity existed, 2) where particles were touching or were in close proximity to one another and/or 3) where the magnitude of ion signal for a given region was count limited. Analysis of the isotopic distributions of uranium containing particles identified by SEEKER showed four distinct, accurately identified 235U enrichment distributions, corresponding to the NIST certified 235U/238U isotope ratios for CRM U129A/U015 (not statistically differentiated), U150, U500 and U850. Additionally, comparison of the minor uranium isotope (234U, 235U and 236U) atom percent values verified that, even in the absence of high precision isotope ratio measurements, SEEKER could be used to segment isotopically unique uranium particles from SIMS image data. Although demonstrated specifically for SIMS analysis of uranium containing particles for nuclear safeguards, SEEKER has application in addressing a broad set of image processing challenges.

adaptive thresholding↗

Onboard utilization of ground control points for image correction. Volume 2: Analysis and simulation results

An approach to remote sensing that meets future mission requirements was investigated. The deterministic acquisition of data and the rapid correction of data for radiometric effects and image distortions are the most critical limitations of remote sensing. The following topics are discussed: onboard image correction systems, GCP navigation system simulation, GCP analysis, and image correction analysis measurement.

Source record↗

The LSST DESC data challenge 1: generation and analysis of synthetic images for next-generation surveys

Data Challenge 1 (DC1) is the first synthetic data set produced by the Rubin Observatory Legacy Survey of Space and Time (LSST) Dark Energy Science Collaboration (DESC). DC1 is designed to develop and validate data reduction and analysis and to study the impact of systematic effects that will affect the LSST data set. DC1 is comprised of r -band observations of 40 deg 2 to 10 yr LSST depth. In this paper, we present each stage of the simulation and analysis process: (a) generation, by synthesizing sources from cosmological N -body simulations in individual sensor-visit images with different observing conditions; (b) reduction using a development version of the LSST Science Pipelines; and (c) matching to the input cosmological catalogue for validation and testing. We verify that testable LSST requirements pass within the fidelity of DC1. We establish a selection procedure that produces a sufficiently clean extragalactic sample for clustering analyses and we discuss residual sample contamination, including contributions from inefficiency in star–galaxy separation and imperfect deblending. We compute the galaxy power spectrum on the simulated field and conclude that: (i) survey properties have an impact of 50 per cent of the statistical uncertainty for the scales and models used in DC1; (ii) a selection to eliminate artefacts in the catalogues is necessary to avoid biases in the measured clustering; and (iii) the presence of bright objects has a significant impact (2σ–6σ) in the estimated power spectra at small scales (ℓ > 1200), highlighting the impact of blending in studies at small angular scales in LSST.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Parametric analysis of an imaging radar for use as an imaging radar for use as an independent landing monitor

The capabilities are analyzed of a real aperture, forward-looking imaging radar for use as an independent landing monitor, which will provide the pilot with an independent means of assessing the progress of an automatic landing during Category 3 operations. The analysis shows that adequate ground resolution and signal-to-noise ratio can be obtained to image a runway with grassy surroundings using a radar operating at 35 GHz in good weather and in most fog but that performance is severely degraded in moderate to heavy rain and wet snow. Weather effects on a 10 GHz imager are not serious, with the possible exception of very heavy rain, but the azimuthal resolution at 10 GHz is inadequate with antennas up to 2 m long.

Bundick, W. T.↗