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At least 1,423 records · Page 79

Production of β-ketoadipic acid from glucose in Pseudomonas putida KT2440 for use in performance-advantaged nylons

Biomass-derived chemicals can offer unique chemical functionality relative to petroleum-derived building blocks. To this end, here we report that β-ketoadipic acid (βKA), a C6 diacid with a β-ketone group, can be used as a performance-advantaged replacement for adipic acid in a nylon-6,6 analog. Building on our previous efforts to produce shikimate-derived products from carbohydrates, Pseudomonas putida KT2440 is engineered to produce βKA from glucose, achieving a 26 g/L titer. Following purification, βKA imparts an increase of 69 degrees C above the nylon-6,6 glass transition temperature and 20% reduced water permeability, equivalent to nylon-6,10. Molecular simulations predict that the enhanced thermal properties result from rigidity introduced by the β-ketone. Process analysis predicts that βKA can be produced for US$1.94/kg from sugars, requiring 63% less energy and emitting 43% less greenhouse gases than fossil-based adipic acid. Overall, this study illustrates the potential for βKA to serve as a useful building block for bio-based polymers.

09 BIOMASS FUELS↗

Stochastic reconstruction of fracture network pattern using spatial point processes

Fracture spatial patterns can strongly affect fluid flow in the subsurface. Proximity and distribution of fractures control reservoir flow behavior over various length scales. In many studies, however, simplified geometrical patterns are generated for fractures which may lead to unrealistic subsurface models. Here we introduce a new method for characterization and modeling of fracture spatial patterns based on outcrop observations. We use Ripley's K-function to characterize the arrangement of fracture barycenters and intersection points over various length scales. In addition, we use semivariograms to quantify spatial correlation in fracture intensity maps. Using this information, we develop a stochastic algorithm that generates two-dimensional fracture network realizations with spatial properties similar to those of a real fracture network measured in the field. Numerical simulation models indicate that the generated fracture realizations exhibit similar flow behaviors as that of the original fracture network. Furthermore, such modeling tools expand and improve our capability in building representative fracture models and in quantification of uncertainty in naturally and hydraulically fractured reservoirs.

58 GEOSCIENCES↗

Creep anisotropy modeling and uncertainty quantification of an additively manufactured Ni-based superalloy

The advantages offered by additive manufacturing over traditional processes has driven a great deal of industrial and academic interest in recent years. However, the process is relatively new and requires additional investigation to become sufficiently mature for wide scale industrial adoption. Electron beam melting powder bed fusion is one technology that has shown promise for fabricating high temperature resistant materials such as nickel based superalloys. The resulting microstructures typically exhibit a strong fiber texture in the build direction giving rise to anisotropic time-dependent deformation behavior. In order to accelerate the qualification of these materials for industrial adoption accurate numerical models are needed for simulating their behavior. In this work a crystal plasticity model including non-Schmid effects is presented for capturing creep anisotropy observed in additively manufactured IN738LC. The model is calibrated via a probabilistic framework where model parameters are treated as random variables. An iterative sequential design strategy is utilized to efficiently identify the probability density of the unknown model parameters. As a case study the model is utilized to investigate the behavior of randomly oriented equiaxed grain clusters sometimes observed embedded in the additively manufactured columnar structure. A synthetic realization is simulated and uncertainty is propagated through to the full-field response. Results indicate that these features are the source of significant creep relaxation and strain accumulation which partially explains observed grain boundary decohesion at these locations.

36 MATERIALS SCIENCE↗

Composition and Configuration Dependence of Glass-Transition Temperature in Binary Copolymers and Blends of Polyhydroxyalkanoate Biopolymers

Polyhydroxyalkanoates (PHAs), a promising class of biomaterials, have gained considerable attention to replace petroleum-based plastics owing to their excellent biocompatibility and biodegradability. Homopolymers of PHA suffer from poor tunability in thermal and mechanical properties. Going from homopolymers to copolymers, the design space can be substantially enhanced by combining two or more monomers in different compositions (i.e., relative ratios of the different monomers) and configurations (i.e., relative positions of the different monomers in the polymer backbone) leading to a substantially large chemical space where application-specific optimization for the targeted functionality can be performed. However, this composition and configuration dependence of properties in the vast PHA copolymer chemical space remains largely unexplored. In this contribution, further building on our past work with PHA homopolymers, we systematically explore these chemical trends for glass-transition temperature (Tg) in PHA copolymers and blends. Overall, our molecular dynamics simulations, utilizing a previously validated force field for PHAs, suggest that these trends are largely governed not only by the homopolymer Tg values but also configuration-dependent interchain interactions in the copolymer system. In particular, our results indicate that the configuration-dependent variation in the target property at a fixed composition can be significant in the presence of hydrogen-bond-forming monomers. These qualitative observations are further rationalized by quantitatively analyzing various closely related atomic level descriptors of copolymers and blends such as monomer mobility, number of hydrogen bonds, and pair correlation functions. The findings presented in this work help to develop a deeper atomistic-level understanding of thermomechanical behavior of PHA-based copolymers and can potentially guide the rational design of biopolymers as environmental-friendly functional materials.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

BioRT‐HBV 1.0: A Biogeochemical Reactive Transport Model at the Watershed Scale

Abstract Reactive Transport Models (RTMs) are essential tools for understanding and predicting intertwined ecohydrological and biogeochemical processes on land and in rivers. While traditional RTMs have focused primarily on subsurface processes, recent watershed‐scale RTMs have integrated ecohydrological and biogeochemical interactions between surface and subsurface. These emergent, watershed‐scale RTMs are often spatially explicit and require extensive data, computational power, and computational expertise. There is however a pressing need to create parsimonious models that require minimal data and are accessible to scientists with limited computational background. To that end, we have developed BioRT‐HBV 1.0, a watershed‐scale, hydro‐biogeochemical RTM that builds upon the widely used, bucket‐type HBV model known for its simplicity and minimal data requirements. BioRT‐HBV uses the conceptual structure and hydrology output of HBV to simulate processes including advective solute transport and biogeochemical reactions that depend on reaction thermodynamics and kinetics. These reactions include, for example, chemical weathering, soil respiration, and nutrient transformation. The model uses time series of weather (air temperature, precipitation, and potential evapotranspiration) and initial biogeochemical conditions of subsurface water, soils, and rocks as input, and output times series of reaction rates and solute concentrations in subsurface waters and rivers. This paper presents the model structure and governing equations and demonstrates its utility with examples simulating carbon and nitrogen processes in a headwater catchment. As shown in the examples, BioRT‐HBV can be used to illuminate the dynamics of biogeochemical reactions in the invisible, arduous‐to‐measure subsurface, and their influence on the observed stream or river chemistry and solute export. With its parsimonious structure and easy‐to‐use graphical user interface, BioRT‐HBV can be a useful research tool for users without in‐depth computational training. It can additionally serve as an educational tool that promotes pollination of ideas across disciplines and foster a diverse, equal, and inclusive user community.

Sadayappan, Kayalvizhi↗

Cross-scale covariance for material property prediction

A simulation can stand its ground against an experiment only if its prediction uncertainty is known. The unknown accuracy of interatomic potentials (IPs) is a major source of prediction uncertainty, severely limiting the use of large-scale classical atomistic simulations in a wide range of scientific and engineering applications. Here we explore covariance between predictions of metal plasticity, from 178 large-scale (~10 8 atoms) molecular dynamics (MD) simulations, and a variety of indicator properties computed at small-scales (≤10 2 atoms). All simulations use the same 178 IPs. In a manner similar to statistical studies in public health, we analyze correlations of strength with indicators, identify the best predictor properties, and build a cross-scale “strength-on-predictors” regression model. This model is then used to estimate regression error over the statistical pool of IPs. Small-scale predictors found to be highly covariant with strength are computed using expensive quantum-accurate calculations and used to predict flow strength, within the statistical error bounds established in our study.

36 MATERIALS SCIENCE↗

The field of human building interaction for convergent research and innovation for intelligent built environments

Human-Building Interaction (HBI) is a convergent field that represents the growing complexities of the dynamic interplay between human experience and intelligence within built environments. This paper provides core definitions, research dimensions, and an overall vision for the future of HBI as developed through consensus among 25 interdisciplinary experts in a series of facilitated workshops. Three primary areas contribute to and require attention in HBI research: humans (human experiences, performance, and well-being), buildings (building design and operations), and technologies (sensing, inference, and awareness). Three critical interdisciplinary research domains intersect these areas: control systems and decision making, trust and collaboration, and modeling and simulation. Finally, at the core, it is vital for HBI research to center on and support equity, privacy, and sustainability. Compelling research questions are posed for each primary area, research domain, and core principle. State-of-the-art methods used in HBI studies are discussed, and examples of original research are offered to illustrate opportunities for the advancement of HBI research.

42 ENGINEERING↗

Neuromorphic learning with Mott insulator NiO

Habituation and sensitization (nonassociative learning) are among the most fundamental forms of learning and memory behavior present in organisms that enable adaptation and learning in dynamic environments. Emulating such features of intelligence found in nature in the solid state can serve as inspiration for algorithmic simulations in artificial neural networks and potential use in neuromorphic computing. In this work, we demonstrate nonassociative learning with a prototypical Mott insulator, nickel oxide (NiO), under a variety of external stimuli at and above room temperature. Similar to biological species such as Aplysia, habituation and sensitization of NiO possess time-dependent plasticity relying on both strength and time interval between stimuli. A combination of experimental approaches and first-principles calculations reveals that such learning behavior of NiO results from dynamic modulation of its defect and electronic structure. An artificial neural network model inspired by such nonassociative learning is simulated to show advantages for an unsupervised clustering task in accuracy and reducing catastrophic interference, which could help mitigate the stability–plasticity dilemma. Mott insulators can therefore serve as building blocks to examine learning behavior noted in biology and inspire new learning algorithms for artificial intelligence.

42 ENGINEERING↗

An automated approach to the alignment of compound refractive lenses

Compound refractive lenses (CRLs) are established X-ray focusing optics, and are used to focus the beam or image the sample in many beamlines at X-ray facilities. While CRLs are quite established, the stack of single lens elements affords a very small numerical aperture because of the thick lens profile, making them far more difficult to align than classical optical lenses that obey the thin-lens approximation. This means that the alignment must be very precise and is highly sensitive to changes to the incident beam, often requiring regular readjustments. Some groups circumvent the full realignment procedure by using engineering controls ( e.g. mounting optics) that sacrifice some of the beam's focusing precision, i.e. spot size, or resolution. While these choices minimize setup time, there are clear disadvantages. This work presents a new automated approach to align CRLs using a simple alignment apparatus that is easy to adapt and install at different types of X-ray experiments or facilities. This approach builds on recent CRL modeling efforts, using an approach based on the Stochastic Nelder–Mead (SNM) simplex method. This method is outlined and its efficacy is demonstrated with numerical simulation that is tested in real experiments conducted at the Advanced Photon Source to confirm its performance with a synchrotron beam. This work provides an opportunity to automate key instrumentation at X-ray facilities.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

On the Generation of Weddell Sea Polynyas in a High-Resolution Earth System Model

Larger Weddell Sea polynyas (WSPs), differentiated in this study from the smaller Maud Rise Polynyas (MRPs), forming to the east of the prime meridian in the proximity of the Maud Rise seamount, have last been observed in the 1970s. We investigate WSPs that grow realistically out of MRPs in a high-resolution (HR) preindustrial simulation with the Energy Exascale Earth System Model version 0.1. The formation of MRPs requires HR to simulate the detailed flow around Maud Rise, while the realistic formation of WSPs requires a model to produce MRPs. Furthermore, WSPs tend to follow periods of a prolonged build-up of a heat reservoir at depth and weakly negative wind-stress curl in association with the core of the southern hemisphere westerlies at an anomalously northern position. While this scenario also leads to drier conditions over the central Weddell Sea, which some literature claims to be a necessary condition for the formation of WSPs, our model results indicate that open-ocean polynyas do not occur during periods of weakly negative wind-stress curl despite drier atmospheric conditions. Our study supports the hypothesis noted in earlier studies that a shift from a weakly negative to a strongly negative wind-stress curl over the Weddell Sea is a prerequisite for WSPs to form, together with a large heat reservoir at depth. However, the ultimate trigger is a pronounced MRP; whose associated convection creates high surface salinity anomalies that propagate westward with the flow of the Weddell Gyre. If large enough, these anomalies trigger the formation of a WSP and a pulse of newly formed Antarctic Bottom Water.

54 ENVIRONMENTAL SCIENCES↗

Tools for Assessing Performance Project: FY2021 Quarter 4 Report

The rotatable building located at Texas Tech’s Reese Technology Center is approximately 14 m wide (width being defined as more normal to the wind than parallel), 9 m long (aligned more with the wind than perpendicular), and 4 m tall. By placing 29 sonic anemometers downwind of the building, see Fig. 1, this facility provided a chance to collect data concerning both the wake velocity deficit distribution in the downstream and crosssteam directions (relative to the mean wind) behind an isolated building. A preliminary comparison between this data and the recently- developed fast-running diffusive wake model, which was developed based on wind tunnel and LES (performed with JOULES) simulations, for the purpose of either validating this model of understanding potential persistent differences between the idealized wind tunnel or LES conditions and those of full-scale real world phenomena. For this preliminary exploration, we utilized the diffusive wake model implemented in the QUIC model.

42 ENGINEERING↗

Mountain waves can impact wind power generation

Abstract. Mountains can modify the weather downstream of the terrain. In particular, when stably stratified air ascends a mountain barrier, buoyancy perturbations develop. These perturbations can trigger mountain waves downstream of the mountains that can reach deep into the atmospheric boundary layer where wind turbines operate. Several such cases of mountain waves occurred during the Second Wind Forecast Improvement Project (WFIP2) in the Columbia River basin in the lee of the Cascade Range bounding the states of Washington and Oregon in the Pacific Northwest of the United States. Signals from the mountain waves appear in boundary layer sodar and lidar observations as well as in nacelle wind speeds and power observations from wind plants. Weather Research and Forecasting (WRF) model simulations also produce mountain waves and are compared to satellite, lidar, and sodar observations. Simulated mountain wave wavelengths and wave propagation speeds (group velocities) are analyzed using the fast Fourier transform. We found that not all mountain waves exhibit the same speed and conclude that the speed of propagation, magnitudes of wind speeds, or wavelengths are important parameters for forecasters to recognize the risk for mountain waves and associated large drops or surges in power. When analyzing wind farm power output and nacelle wind speeds, we found that even small oscillations in wind speed caused by mountain waves can induce oscillations between full-rated power of a wind farm and half of the power output, depending on the position of the mountain wave's crests and troughs. For the wind plant analyzed in this paper, mountain-wave-induced fluctuations translate to approximately 11 % of the total wind farm output being influenced by mountain waves. Oscillations in measured wind speeds agree well with WRF simulations in timing and magnitude. We conclude that mountain waves can impact wind turbine and wind farm power output and, therefore, should be considered in complex terrain when designing, building, and forecasting for wind farms.

17 WIND ENERGY↗

Distance‐based reconstruction of protein quaternary structures from inter‐chain contacts

Abstract Predicting the quaternary structure of protein complex is an important problem. Inter‐chain residue‐residue contact prediction can provide useful information to guide the ab initio reconstruction of quaternary structures. However, few methods have been developed to build quaternary structures from predicted inter‐chain contacts. Here, we develop the first method based on gradient descent optimization (GD) to build quaternary structures of protein dimers utilizing inter‐chain contacts as distance restraints. We evaluate GD on several datasets of homodimers and heterodimers using true/predicted contacts and monomer structures as input. GD consistently performs better than both simulated annealing and Markov Chain Monte Carlo simulation. Starting from an arbitrarily quaternary structure randomly initialized from the tertiary structures of protein chains and using true inter‐chain contacts as input, GD can reconstruct high‐quality structural models for homodimers and heterodimers with average TM‐score ranging from 0.92 to 0.99 and average interface root mean square distance from 0.72 Å to 1.64 Å. On a dataset of 115 homodimers, using predicted inter‐chain contacts as restraints, the average TM‐score of the structural models built by GD is 0.76. For 46% of the homodimers, high‐quality structural models with TM‐score ≥ 0.9 are reconstructed from predicted contacts. There is a strong correlation between the quality of the reconstructed models and the precision and recall of predicted contacts. Only a moderate precision or recall of inter‐chain contact prediction is needed to build good structural models for most homodimers. Moreover, GD improves the quality of quaternary structures predicted by AlphaFold2 on a Critical Assessment of Techniques for Protein Structure Prediction–Critical Assessments of Predictions of Interactions dataset.

59 BASIC BIOLOGICAL SCIENCES↗

Natural fibers as promising core materials of vacuum insulation panels

To reduce energy consumption in buildings, this paper investigates the feasibility of using natural fibers as cost-effective, environmentally sustainable core materials for vacuum insulation panels (VIPs). First, a comprehensive experimental study was conducted for 10 potential natural fiber candidates. The thermal conductivities of the 10 natural fiber mats at various vacuum pressures were measured; their compression and morphology properties were quantified. In addition, an analytical model was used to explore the major factors that influence the thermal conductivity of natural fibers as a function of internal air pressure. Results show that recycled cotton, kapok, and bamboo fibers are ideal candidates for VIP core materials; at <0.05 Pa, their thermal conductivities varied between 2 and 4 mW/(m∙K). Furthermore, for some fibers, thermal conductivity was inversely proportional to fiber density. For the selection of fiber materials for VIP cores, the ideal fiber candidate has a small fiber diameter and a low fiber mat density. Based on thermal measurements, even though the internal air pressure of 5 Pa was enough to attain the minimum thermal conductivity, obtaining internal air pressure below 5 Pa is recommended for prolonged service life, considering small leaks of VIP package barrier films and potential off-gassing from fibers. The simulation results predicting the effective thermal conductivities matched the experimental results well. These findings indicate that natural fiber–based VIPs have the potential to be a sustainable, inexpensive alternative to the current technologies in building insulation materials.

36 MATERIALS SCIENCE↗

Sensor Incipient Fault Impacts on Building Energy Performance: A Case Study on a Multi-Zone Commercial Building

Existing studies show sensor faults/error could double building energy consumption and carbon emissions compared with the baseline. Those studies assume that the sensor error is fixed or constant. However, sensor faults are incipient in real conditions and there were extremely limited studies investigating the incipient sensor fault impacts systematically. This study filled in this research gap by studying time-developing sensor fault impacts to rule-based controls on a 10-zone office building. The control sequences for variable air volume boxes (VAV) with an air handling unit (AHU) system were selected based on ASHRAE Guideline 36-2018: High-Performance Sequences of Operation for HVAC Systems. Large-scale simulations on cloud were conducted (3600 cases) through stochastic approach. Results show (1) The site energy differences could go –3.3% lower or 18.1% higher, compared with baseline. (2) The heating energy differences could go –66.5% lower or 314.4% higher, compared with baseline. (3) The cooling energy differences could go –11.5% lower or 65.0% higher, compared with baseline. (4) The fan energy differences could go 0.15% lower or 6.9% higher, compared with baseline.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Energy flexibility of residential buildings: A systematic review of characterization and quantification methods and applications

With building electric demand becoming increasingly dynamic, and a growing percentage of intermittent renewable power generation from solar photovoltaics and wind turbines, the power grid is facing increasing challenge to manage the real time balance between the supply and demand. With advancements in smart sensing and metering, smart appliances, electric vehicles, and energy storage technologies, demand side management of residential buildings can help the grid to improve stability by optimizing flexible loads. This paper reviews recent studies on residential building demand side management, with a focus on characterization and quantification of energy flexibility covering various types of flexible loads, metrics, methods, and applications. The reviewed studies showed four levels of applications: building level (45%), district or community level (29%), system level (19%), and building sector level (7%). Shifting loads is the dominant flexibility type in 60% of applications, followed by shedding (19%), generation (16%), and modulating (6%). Depending on the technology and application scope, flexible operations have a wide range of performance, with peak power reductions of 1%~65%, energy savings up to 60%, operational cost reduction of 1%~48%, and greenhouse gas emission reductions of up to29%. More than half (51%) of the studies employed control strategies to achieve flexibility; among those 72% used optimal controls, while 28% used rule-based controls. About 58% of the studies used mathematical formulation to quantify energy flexibility. Most studies were based on simulation, while less than 15% of the studies had measurements from experiments or field tests. The review reveals research opportunities to address significant gaps in the existing literature: (1) establishing a common definition and performance metrics for energy flexibility of buildings that are technology and application agnostic, (2) developing an ontology to standardize representation of flexibility resources for interoperability, (3) integrating occupant impacts into the quantification and optimization of energy flexibility, and (4) developing requirements and credits of energy flexibility in building energy codes and standards. Findings from the review can inform future research and development of energy flexible buildings which are essential to a reliable and resilient power grid.

Li, H↗

Automated detector simulation and reconstruction parametrization using machine learning

Rapidly applying the effects of detector response to physics objects (e.g. electrons, muons, showers of particles) is essential in high energy physics. Presently available tools for the transformation from truth-level physics objects to reconstructed detector-level physics objects involve manually defining resolution functions. These resolution functions are typically derived in bins of variables that are correlated with the resolution (e.g. pseudorapidity and transverse momentum). This process is time consuming, requires manual updates when detector conditions change, and can miss important correlations. Machine learning offers a way to automate the process of building these truth-to-reconstructed object transformations and can capture complex correlation for any given set of input variables. Such machine learning algorithms, with sufficient optimization, could have a wide range of applications: improving phenomenological studies by using a better detector representation, allowing for more efficient production of Geant4 simulation by only simulating events within an interesting part of phase space, and studies on future experimental sensitivity to new physics.

47 OTHER INSTRUMENTATION↗

Issue Resolution During the Development of the Performance Assessment for the Savannah River Site Saltstone Disposal Facility - 20125

In 2019, Savannah River Remediation developed a revision to the performance assessment (PA) on behalf of the U.S. Department of Energy (DOE) Savannah River Operations Office (SR) for the near-surface disposal of low-level waste at the Savannah River Site (SRS) Saltstone Disposal Facility (SDF). Soluble waste from SRS Tank Farms undergoes salt processing to remove cesium and other high-activity constituents. The low-activity decontaminated salt solution (DSS) is then immobilized by mixing it into a cementitious waste form known as saltstone. After mixing, the saltstone is poured into leak-tight concrete vaults, known as saltstone disposal units (SDUs), where the waste form cures. By the time of facility closure, the SDF is expected to consist of 15 SDUs with a combined capacity of 1.06 E+09 L (280 Mgal) of cured saltstone. The facility operates under a Disposal Authorization Statement from DOE and a permit from the South Carolina Department of Health and Environmental Control (SCDHEC). Since the start of operations in 1990, the SDF has received almost 6.7 E+07 L (18 Mgal) of DSS, resulting in the safe disposal of 2.7 E+16 Bq (7.3 E+05 Ci) of activity. Due to the radioactive decay of short-lived contaminants, the total remaining activity in the disposed waste is estimated to be approximately 1.4 E+16 Bq (3.9 E+05 Ci), as of September 2018. The Disposal Authorization Statement requires a demonstration that the system of engineered and natural features of the disposal facility will limit releases from the facility and be protective of human health and the environment for at least the next 1,000 years. The long-term performance of the facility was evaluated under the requirements of the DoE's Radioactive Waste Management Manual (US DOE Manual 435.1-1). Simulations were performed to demonstrate that the disposal facility would meet performance objectives specified in the manual. The evaluation was based on numerical models that simulate the releases of contaminants from the saltstone waste form. Contaminants were transported through groundwater and air pathways to points of assessment to evaluate compliance (i.e., 100 m from the SDUs). In addition, the potential consequences of an inadvertent human intrusion (IHI) were also evaluated. A number of issues were overcome during the development of these simulations. These issues were identified as part of internal technical reviews. Simulations are developed by people and people make mistakes, so the internal technical review process is a vital step in PA development. Specific examples of resolved issues include a unit-conversion error, an inappropriate definition for a model boundary condition, a model time-stepping issue, and an error in the calculation for the buildup of contaminants in soil. Actions taken to address these issues resulted in an improved product with a better supported technical basis and more defensible results. The identification and correction of these issues are discussed. By understanding these issues, model developers and technical reviewers working on PAs in the future may avoid repeating these types of mistakes. Transparency with respect to these mistakes builds trust between waste management sites, regulators, and stakeholders. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗