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At least 1,405 records · Page 78

Modeling Subsurface Explosions Recorded on a Distributed Fiber Optic Sensor

Fiber optic distributed acoustic sensors (DAS) are becoming a widely used tool for seismic sensing. Here we examine recordings of two subsurface chemical explosions, DAG-1 and DAG-3, each of which was about one metric ton (TNT equivalent), that were recorded from a helical fiber installed in two boreholes 80 m away from the source location. Several clear phases including the initial P wave, a weak S wave, and a surface reflected P wave are observed on the helical DAS data. We estimate a velocity model using arrival times measured from the fiber. The DAS waveform data were compared with colocated accelerometers at specific depths in both frequency and time domains. Furthermore, the spectra of the DAS data matched spectra estimated from the accelerometer records. Comparisons of observed waveform shape between the accelerometer records and the fiber measurements (strain-rate) show reasonable agreement except for the data near the event depth. The DAS data and the accelerometer agreed in relative amplitudes but we had difficulties in matching absolute amplitudes, possibly due to errors in metadata. Synthetic strain-rate waveforms were calculated using a 2D wavenumber algorithm and matched the waveform shape and relative amplitudes. In general, DAS is effective at recording strong ground motions at high spatial density. Comparison of the synthetic seismograms with observed data indicate that the waveforms are not consistent with a pure isotropic explosion source and that the observed S waves originate from very near the source region.

58 GEOSCIENCES↗

Electrical Responses of Modified Mineral Surfaces as Observed With Spectral Induced Polarization and Atomic Force Microscopy

Abstract Atomic force microscopy (AFM) and spectral induced polarization (SIP) are widely used to investigate the electrical properties of mineral surfaces at vastly different scales of measurement. We compare AFM and SIP measurements made on two different materials (glass beads and silica gel) subjected to etching, deposition of iron oxide particles, and inclusion of calcite grains. We found that the treatments produced qualitatively consistent behaviors in the AFM and SIP data. Direct AFM measurements of surface charge density for silica and calcite surfaces were quantitatively compared to values estimated from the SIP results using a grain polarization model. No statistically significant difference (at a 95% confidence level) was found between the surface charge density of silica estimated by AFM (2.3 ± 6.6 mC/m 2 for glass beads and 1.6 ± 0.1 mC/m 2 for silica gel) versus SIP (5.4 ± 4.4 mC/m 2 for glass beads and 1.6 ± 0.5 mC/m 2 for silica gel). The surface charge density for calcite determined by AFM (43.5 ± 12.9 mC/m 2 ) was approximately 19 times higher than that found for silica. While the charge density of calcite surfaces determined by SIP was also generally higher than that found for silica, different treatments produced significantly different values between 4.7 and 258 mC/m 2 (with a maximum 95% CI of ±8.7 mC/m 2 ). Several possible explanations exist for the range of the observed SIP measurements, including aging of the calcite surfaces. Overall, this study suggests the potential for the complementary use of AFM and SIP measurements to constrain future investigations of polarization mechanisms in porous media.

Geochemistry & Geophysics↗

Seasonal enhancement of the viral shunt catalyzes a subsurface oxygen maximum in the Sargasso Sea

Subsurface oxygen maxima (SOMs) occur directly beneath the mixed layer of stratified water columns across oligotrophic open ocean basins and have been associated with physical transport processes and localized increases in phytoplankton net primary productivity (NPP). We explore the hypothesis that viral lysis (i.e., the ‘viral shunt’) increases nutrient recycling and enhances NPP, supporting SOM formation in stratified water columns, focusing on a recurring SOM at the Bermuda Atlantic Time Series (BATS) in the Sargasso Sea. Reanalysis of historical BATS data showed enhanced Prochlorococcus and virus-like particle abundances associated with SOMs. Instances of high rates of primary and secondary production observed with oxygen supersaturation further implicate a biological mechanism for SOM formation. Leveraging metatranscriptomes, metaviromes, and polony-based data collected during a Lagrangian cruise (October 2019), we link the viral shunt to SOMs, including evidence of elevated cyanophage abundance and infection of Prochlorococcus, and transcriptomic evidence of increased organic matter uptake (i.e., catabolic activity) by copiotrophic bacteria. Cruise data also showed Prochlorococcus nitrogen metabolism transcripts consistent with increased responsiveness to bacterial remineralization. These findings illustrate the biogeochemical impacts of enhanced viral lysis in marine systems, including the potential role of the viral shunt in facilitating SOM formation in the oligotrophic oceans.

Gilbert, Naomi E. [Univ. of Tennessee, Knoxville, ↗

Toward the performance assessment of advanced nuclear waste forms: temperature dependence of lanthanide borosilicate glass dissolution

Lanthanide borosilicate (LaBS) glasses are among the most promising waste forms for the immobilization of high-level radioactive waste generated from advanced nuclear fuel cycles. However, the temperature dependence of their dissolution kinetics remains poorly understood and constrained, limiting the integration of these materials into established performance assessment models. Here, we investigate the dissolution behavior of the legacy AmCm2-19 LaBS glass and the benchmark alkali aluminoborosilicate ISG-1 in deionized water between 50 °C and 250 °C using ASTM C1285 (Product Consistency Test-B) protocols. For AmCm2-19 LaBS glass, normalized elemental release rates for boron and silicon increase with temperature before plateauing near 150 °C, consistent with solubility-limited behavior. From data obtained at 50 °C and 100 °C, Arrhenius analysis yields activation energies of E a (B) = 24.8 ± 0.3 kJ mol⁻¹ and E a (Si) = 14.4 ± 0.2 kJ mol⁻¹, similar or slightly lower than those previously reported for two other compositions of LaBS glasses. No secondary phases or alteration layers were detected by SEM-EDX or pXRD. These results establish one of the first temperature-dependent kinetic datasets for LaBS glass dissolution, providing quantitative parameters to inform mechanistic corrosion models and predictive simulations of glass degradation in geological disposal environments.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Persistence of viral RNA in North American elk experimentally infected with an ancestral strain of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)

Abstract White-tailed deer (Odocoileus virginianus) have emerged as a reservoir host for SARS-CoV-2 given their susceptibility to infection and demonstrated high rates of seroprevalence and infection across the United States. As SARS-CoV-2 circulates within free-ranging white-tailed deer populations, there is the risk of transmission to other wildlife species and even back to the human population. The goal of this study was to determine the susceptibility, shedding, and immune response of North American elk (Cervus elaphus canadensis) to experimental infection with SARS-CoV-2, to determine if another wide-ranging cervid species could potentially serve as a reservoir host for the virus. Here we demonstrate that while North American elk do not develop clinical signs of disease, they do develop a neutralizing antibody response to infection, suggesting the virus is capable of replicating in this mammalian host. Additionally, we demonstrate SARS-CoV-2 RNA presence in the medial retropharyngeal lymph nodes of infected elk three weeks after experimental infection. Consistent with previous observations in humans, these data may highlight a mechanism of viral persistence for SARS-CoV-2 in elk.

Science & Technology - Other Topics↗

Generalized vs. fractional: a comparative analysis of Maxwell models applied to entangled polymer solutions

Fractional viscoelastic models provide an excellent description of rheological data for polymer systems with power-law behaviour. However, the physical interpretation of their model parameters, which carry fractional units of time, often remains elusive. We show that for poly(ethylene oxide) (PEO) solutions, the fractional Maxwell model (FMM) requires much fewer model parameters than the classical generalized Maxwell model for a good description of the data and that it can be applied consistently to solutions with varying degrees of viscoelasticity. Despite their fractional units, the parameters exhibit scaling laws similar to classical parameters as a function of polymer concentration.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Theory of edge localized mode suppression by static resonant magnetic perturbations in the DIII-D tokamak

According to a recent paper [Hu et al ., Phys. Plasmas 26, 120702 (2019)], mode penetration at the top of the pedestal is a necessary and sufficient condition for the suppression of edge localized modes (ELMs) by a resonant magnetic perturbation (RMPs) in an H-mode tokamak discharge. This paper employs asymptotic matching theory to model a particular DIII-D discharge in which ELMs were suppressed by an externally generated, static, n ¼ 2, RMP whose amplitude was modulated at a frequency of 1 Hz. It is demonstrated that the response of the plasma to the applied RMP, in the immediate vicinities of the rational (i.e., resonant) surfaces, is governed by nonlinear, rather than by linear, physics. This is the case because the magnetic island widths associated with driven reconnection exceed the linear layer widths, even in cases where driven reconnection is strongly suppressed by plasma rotation. The natural frequency at a given rational surface (i.e., the helical frequency at which the locally resonant component of the RMP would need to propagate in order to maximize driven reconnection) is found to be offset from the local E B frame in the ion diamagnetic direction. The size of the offset is mostly determined by neoclassical poloidal rotation. Finally, the predictions of a fully nonlinear plasma response model are found to be broadly consistent with the DIII-D experimental data.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Two-dimensional retrieval methods for ultrafast imaging of molecular structure using laser-induced electron diffraction

Molecular structural retrieval based on electron diffraction has been proposed to determine the atomic positions of molecules with sub-angstrom spatial and femtosecond temporal resolutions. Given its success on small molecular systems, in this work, we point out that the accuracy of structure retrieval is constrained by the availability of a wide range of experimental data in the momentum space in all molecular systems. To mitigate the limitations, for laser-induced electron diffraction, here we retrieve molecular structures using two-dimensional (energy and angle) electron momentum spectra in the laboratory frame for a number of small molecular systems, which have previously been studied with 1D methods. Compared to the conventional single-energy or single-angle analysis, our 2D methods effectively expand the momentum range of the measured data. Besides utilization of the 2D data, two complementary methods are developed for consistency check on the retrieved results. Further, the 2D nature of our methods also offers a way of estimating the error from retrieval, which has never been explored before. Comparing with results from prior experiments, our findings show evidence that our 2D methods outperform the conventional 1D methods. Paving the way to the retrieval of large molecular systems, in which their tunneling ionization rates are challenging to obtain, we estimate the error of using the isotropic model in place of including the orientation-dependent ionization rate.

74 ATOMIC AND MOLECULAR PHYSICS↗

Transfer learning driven design optimization for inertial confinement fusion

Transfer learning is a promising approach to create predictive models that incorporate simulation and experimental data into a common framework. In this technique, a neural network is first trained on a large database of simulations and then partially retrained on sparse sets of experimental data to adjust predictions to be more consistent with reality. Previously, this technique has been used to create predictive models of Omega [Humbird et al., IEEE Trans. Plasma Sci. 48, 61–70 (2019)] and NIF [Humbird et al., Phys. Plasmas 28, 042709 (2021); Kustowski et al., Mach. Learn. 3, 015035 (2022)] inertial confinement fusion (ICF) experiments that are more accurate than simulations alone. Here, in this work, we conduct a transfer learning driven hypothetical ICF campaign in which the goal is to maximize experimental neutron yield via Bayesian optimization. The transfer learning model achieves yields within 5% of the maximum achievable yield in a modest-sized design space in fewer than 20 experiments. Furthermore, we demonstrate that this method is more efficient at optimizing designs than traditional model calibration techniques commonly employed in ICF design. Such an approach to ICF design could enable robust optimization of experimental performance under uncertainty.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Isotope effects in supercooled H 2 O and D 2 O and a corresponding-states-like rescaling of the temperature and pressure

Water shows anomalous properties that are enhanced upon supercooling. The unusual behavior is observed in both H 2 O and D 2 O, however, with different temperature dependences for the two isotopes. It is often noted that comparing the properties of the isotopes at two different temperatures (i.e., a temperature shift) approximately accounts for many of the observations—with a temperature shift of 7.2 K in the temperature of maximum density being the most well-known example. However, the physical justification for such a shift is unclear. Motivated by recent work demonstrating a “corresponding-states-like” rescaling for water properties in three classical water models that all exhibit a liquid–liquid transition and critical point, the applicability of this approach for reconciling the differences in the temperature- and pressure-dependent thermodynamic properties of H 2 O and D 2 O is investigated here. Utilizing previously published data and equations-of-state for H 2 O and D 2 O, we show that the available data and models for these isotopes are consistent with such a low temperature correspondence. These observations provide support for the hypothesis that a liquid–liquid critical point, which is predicted to occur at low temperatures and high pressures, is the origin of many of water’s anomalies.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Effects of oxidation and impurities in lithium surfaces on the emitting wall plasma sheath

The use of lithium as a surface coating in fusion devices improves the plasma performance, but the change in the wall properties affects the secondary electron emission properties of the material. Lithium oxidizes easily, which drives the emission yield well above unity. We present here simulations demonstrating the change in the sheath structure from monotonic to the nonmonotonic space-charge limited sheath using an energy-dependent data-driven emission model, which self-consistently captures both secondary emission and backscattering populations. Increased secondary electron emission from the material has ramifications for the degradation and erosion of the wall. The results show that the oxidation leads to an increased electron energy flux into the wall and a reduced ion energy flux. The net transfer of energy to the surface is significantly greater for the oxidized case than for the pure lithium case. High backscattering rates of low-energy particles lead to a high re-emission rate at the wall.

Fusion reactors↗

Simultaneous stabilization and control of the n = 1 and n = 2 resistive wall mode

Abstract DIII-D experiments demonstrate simultaneous stability measurements and control of resistive wall modes (RWMs) with toroidal mode numbers n = 1 and n = 2. RWMs with n > 1 are sometimes observed on DIII-D following the successful feedback stabilization of the n = 1 mode, motivating the development of multi- n control. A new model-based multi-mode feedback algorithm based on the VALEN physics code has been implemented on the DIII-D tokamak using a real-time GPU installed directly into the DIII-D plasma control system. In addition to stabilizing RWMs, the feedback seeks to control the stable plasma error field response, enabling compensation of the typically unaddressed DIII-D n = 2 error field component. Experiments recently demonstrated this algorithm’s ability to simultaneously control n = 1 and n = 2 perturbed fields for the first time in a tokamak, using reactor relevant external coils. Control was maintained for hundreds of wall-times above the n = 1 no-wall pressure limit and approaching the n = 1 and n = 2 ideal-wall limits. Furthermore, a rotating non-zero target was set for the feedback, allowing stability to be assessed by monitoring the rotating plasma response (PR) while maintaining control. This novel technique can be viewed as a closed-loop extension of active MHD spectroscopy, which has been used to validate stability models through comparisons of the PR to applied, open-loop perturbations. The closed-loop response measurements are consistent with open-loop MHD spectroscopy data over a wide range of β N approaching the n = 1 ideal-wall limit. These PR measurements were then fit to produce both VALEN and single-mode stability models. These models allowed for important plasma stability information to be determined and have been shown to agree with experimentally observed RWM growth rates.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Deep graph representations embed network information for robust disease marker identification

We report that the accurate disease diagnosis and prognosis based on omics data rely on the effective identification of robust prognostic and diagnostic markers that reflect the states of the biological processes underlying the disease pathogenesis and progression. In this article, we present GCNCC, a Graph Convolutional Network-based approach for Clustering and Classification, that can identify highly effective and robust network-based disease markers. Based on a geometric deep learning framework, GCNCC learns deep network representations by integrating gene expression data with protein interaction data to identify highly reproducible markers with consistently accurate prediction performance across independent datasets possibly from different platforms. GCNCC identifies these markers by clustering the nodes in the protein interaction network based on latent similarity measures learned by the deep architecture of a graph convolutional network, followed by a supervised feature selection procedure that extracts clusters that are highly predictive of the disease state. By benchmarking GCNCC based on independent datasets from different diseases (psychiatric disorder and cancer) and different platforms (microarray and RNA-seq), we show that GCNCC outperforms other state-of-the-art methods in terms of accuracy and reproducibility.

59 BASIC BIOLOGICAL SCIENCES↗

Constraining RV variation using highly reddened Type Ia supernovae from the Pantheon+ sample

ABSTRACT Type Ia supernovae (SNe Ia) are powerful tools for measuring the expansion history of the Universe, but the impact of dust around SNe Ia remains unknown and is a critical systematic uncertainty. One way to improve our empirical description of dust is to analyse highly reddened SNe Ia [E(B − V) > 0.4, roughly equivalent to the fitted SALT2 light-curve parameter c > 0.3]. With the recently released Pantheon+ sample, there are 57 SNe Ia that were removed because of their high colour alone (with colours up to c = 1.61), which can provide enormous leverage on understanding line-of-sight RV. Previous studies have claimed that RV decreases with redder colour, though it is unclear if this is due to limited statistics, selection effects, or an alternative explanation. To test this claim, we fit two separate colour–luminosity relationships, one for the main cosmological sample (c < 0.3) and one for highly reddened (c > 0.3) SNe Ia. We find the change in the colour–luminosity coefficient to be consistent with zero. Additionally, we compare the data to simulations with different colour models, and find that the data prefers a model with a flat dependence of RV on colour over a declining dependence. Finally, our results strongly support that line-of-sight RV to SNe Ia is not a single value, but forms a distribution.

79 ASTRONOMY AND ASTROPHYSICS↗

Probing the rapid formation of black holes and their Galaxy hosts in QSOs

Using the modelling code x-cigale, we reproduced the spectral energy distributions (SEDs) of 1359 SDSS quasi-stellar objects (QSOs) within the redshift range 0 < z < 4, for which we have NIR/MIR fluxes with the highest quality and spectral data characterizing their supermassive black hole (SMBHs). Consistent with a rapid formation of the host galaxies, the star formation histories (SFHs) have small e-folding, at most 750 Myr using an SFH function for spiral or 1000 Myr using one for elliptical. Above z ∼ 1.6, the two solutions are degenerate, the SEDs being dominated by the active galactic nucleus (AGN) continuum and high star formation rates (SFRs), typical of starburst galaxies, while at lower redshifts the starburst nature of the host, independent from its morphology, is better reproduced by a spiral SFH. In general, the SFR increases with the redshift, the mass of the bulge, the AGN luminosity, and Eddington ratio, suggesting there is no evidence of AGN quenching of star formation. Comparing the specific BH accretion rate (BHAR) with specific SFR, all the QSOs at any redshift trace a linear sequence below the Eddington luminosity, in parallel and above the one-to-one relation, implying that QSOs are in a special phase of evolution during which the growth in mass of their SMBH is more rapid than the growth in mass of their galaxy hosts. This particular phase is consistent with a scenario where the galaxy hosts of QSOs in the past grew in mass more rapidly than their SMBHs, suggesting that a high star formation efficiency during their formation was responsible in limiting their masses.

79 ASTRONOMY AND ASTROPHYSICS↗

Developing an Evolutionary Baseline Model for Humans: Jointly Inferring Purifying Selection with Population History

Building evolutionarily appropriate baseline models for natural populations is not only important for answering fundamental questions in population genetics—including quantifying the relative contributions of adaptive versus nonadaptive processes—but also essential for identifying candidate loci experiencing relatively rare and episodic forms of selection (e.g., positive or balancing selection). Here, a baseline model was developed for a human population of West African ancestry, the Yoruba, comprising processes constantly operating on the genome (i.e., purifying and background selection, population size changes, recombination rate heterogeneity, and gene conversion). Specifically, to perform joint inference of selective effects with demography, an approximate Bayesian approach was employed that utilizes the decay of background selection effects around functional elements, taking into account genomic architecture. This approach inferred a recent 6-fold population growth together with a distribution of fitness effects that is skewed towards effectively neutral mutations. Importantly, these results further suggest that, although strong and/or frequent recurrent positive selection is inconsistent with observed data, weak to moderate positive selection is consistent but unidentifiable if rare.

59 BASIC BIOLOGICAL SCIENCES↗

Properties of states near 𝐸 𝑥 = 6 MeV in 18 Ne through 17 F +𝑝 scattering

The rate of energy production in the hot-CNO cycle and breakout to the rapid-proton capture process in Type I X-ray bursts is strongly related to the 14 O⁡(𝛼,𝑝)⁢ 17 F reaction rate. The properties of states in 18 Ne near 𝐸 𝑥 = 6.1–6.3 MeV are important for understanding the 14 O⁡(𝛼,𝑝)⁢ 17 F reaction rate. In order to study 18 Ne resonances around this energy region, the RESOLUT radioactive-ion beam facility at Florida State University was used to perform 17 F⁡(𝑝,𝑝)⁢ 17 F elastic scattering on a polypropylene target under inverse kinematics. Scattered protons were detected in a silicon-strip detector array while recoiling 17 F ions were detected in coincidence in a gas ionization detector. An 𝑅-matrix analysis of measured cross sections was conducted along with a reanalysis of data from previous 17 F +𝑝 measurements. All the data analyzed are well described by a consistent set of parameters with a 1 − assignment for a state at 6.14(1) MeV. A second comparable solution is also found with a 3 − assignment for the 6.14(1) MeV state. There is no conclusive evidence supporting one of the two solutions over the other. The rates of the 14 O⁡(𝛼,p)⁢ 17 F reaction that are determined from the two solutions differ by up to an order of magnitude.

6 ≤ A ≤ 19↗

Band structure and Fermi surface nesting in LaSb 2

Here we use high-resolution angle-resolved photoemission spectroscopy (ARPES) and density functional theory (DFT) to investigate the electronic structure of the charge density wave (CDW) system LaSb 2 . This compound is among an interesting group of materials that manifests both a CDW transition and lower temperature superconductivity. We find the DFT calculations to be in good agreement with our ARPES data. The Fermi surface of LaSb 2 consists of two small hole pockets close to Γ and four larger pockets near the Brillouin zone boundary. The key features of the Fermi surface do not vary significantly with temperature. A saddle point is present at -0.19 eV below the Fermi level at Γ. Saddle points in the band structure have more pronounced effects on materials properties when they are located closer to the Fermi level, making doped LaSb 2 compounds a potential interesting subject of future research. Multiple peaks are present in the generalized, electronic susceptibility calculations, indicating the presence of three possible nesting vectors. We were not able to detect any signatures of the CDW transition at 355 K down to the lowest temperature of 7 K, pointing to the subtle nature of this transition. This is unusual, given that such a high transition temperature is expected to be associated with the presence of a large CDW gap. This is confirmed through investigation of the Fermi surface and through analysis of momentum distribution curves. It is possible that changes are subtle and occur below current sensitivity of our measurements.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗