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At least 1,405 records · Page 78
All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

Accuracy-Based Annotation Quality Score (ABAQS) v1.0

Assessing genome annotation quality is crucial for downstream analyses, but current methods are inadequate for eukaryotes. We present Accuracy-Based Annotation Quality Score (ABAQS), a novel, minimal-data-driven method that comprehensively assesses annotation quality. ABAQS evaluates multiple factors, including genome completeness, gene model validity, and protein profile accuracy, outperforming other metrics like BUSCO and PSAURON. We applied ABAQS to over 2500 eukaryotic genomes and showed its robustness and effectiveness in evaluating genome annotation quality, making it a valuable tool for researchers working with genomic data. ABAQS reveals significant variation in annotation quality and highlights the importance of filtering in improving annotation quality and accuracy.

Haridas, Sajeet [Lawrence Berkeley National Labora↗
DOE OSTI2025

Firm Synthesizer and Supply-chain Simulator (SynthFirm) v2.0

SynthFirm is a national-scale agent-based freight demand model which generates a complete synthetic population of firms in the U.S. and the business-to-business commodity flows between them. Using publicly available data sources as inputs, SynthFirm simulates detailed firm and fleet characteristics, commodity production and consumption, formation of supply chains, and selection of shipping modes, all of which are essential drivers of commodity flow at a disaggregate level. The SynthFirm 2.0 version includes national commercial vehicle fleet generation, international trade simulation and automized model validation pipeline, which allows seemless deployment across the nation and build a comprehensive freight inventories at national scale or for selected region.

Yang, Hung-Chia [Lawrence Berkeley National Labora↗
DOE OSTI2020

Sensitivity of Wind Turbine Array Downstream Effects to the Parameterization Used in WRF

The Weather Research and Forecasting (WRF) Model has been extensively used for wind energy applications, and current releases include a scheme that can be applied to examine the effects of wind turbine arrays on the atmospheric flow and electricity generation from wind turbines. Herein we present a high-resolution simulation using two different wind farm parameterizations: 1) the “Fitch” parameterization that is included in WRF releases and 2) the recently developed Explicit Wake Parameterization (EWP) scheme. We compare the schemes using a single yearlong simulation for a domain centered on the highest density of current turbine deployments in the contiguous United States (Iowa). Pairwise analyses are applied to diagnose the downstream wake effects and impact of wind turbine arrays on near-surface climate conditions. On average, use of the EWP scheme results in small-magnitude wake effects within wind farm arrays and faster recovery of full WT array wakes. This in turn leads to smaller impacts on near-surface climate variables and reduced array–array interactions, which at a systemwide scale lead to summertime capacity factors (i.e., the electrical power produced relative to nameplate installed capacity) that are 2%–3% higher than those from the more commonly applied Fitch parameterization. It is currently not possible to make recommendations with regard to which wind farm parameterization exhibits higher fidelity or to draw inferences with regard to whether the relative performance may vary with prevailing climate conditions and/or wind turbine deployment configuration. However, the sensitivities documented herein to the wind farm parameterization are of sufficient magnitude to potentially influence wind turbine array siting decisions. Thus, our research findings imply high value in undertaking combined long-term high-fidelity observational studies in support of model validation and verification.

17 WIND ENERGY↗
DOE OSTI2023

Predicting Postoperative Injury and Military Discharge Status After Knee Surgery in the US Army

Background: Researchers have assessed postoperative injury or disability predictors in the military setting but typically focused on 1 type of surgical procedure at a time, used relatively small sample sizes, or investigated mixed cohorts with civilian populations. Purpose: To identify the relationship between baseline variables and injury incidence or military discharge status in US Army soldiers after knee surgery. Study Design: Case-control study; Level of evidence, 3. Methods: Data were obtained from a repository containing personnel, performance, and medical records for all active-duty US Army soldiers. Multivariate logistic regressions were used to estimate the effects of numerous variables on postoperative injury or on medical discharge. Variable selection and model validation were conducted using the k-fold method. Results: A total of 7567 soldiers underwent knee surgery between 2017 and 2019. Meniscal procedures were the most common type of surgery (39%), and approximately 71% of the cohort had a postoperative injury. Significant predictors for sustaining a postoperative injury included having a previous nonknee injury (odds ratio [OR], 1.5), female sex (OR, 1.3), and Black race (OR, 1.2). Within 4 years after surgery, 17% of soldiers were discharged from the military because of knee-related disability. Significant predictors for discharge from duty included enlisted rank (OR, 2.3), recent fitness test failure (OR, 1.9), number of previous knee surgeries (OR, 1.7), and having a previous nonknee injury (OR, 1.6). Conclusion: After knee surgery, nearly three-fourths of the soldiers in this cohort sustained a postoperative injury and almost one-fifth of soldiers were medically discharged from the military within 4 years. This study identified variables that indicate statistically increased risk for these postoperative outcomes and highlighted potentially modifiable factors.

Orthopedics↗
DOE OSTI2022

Health Physics Research Reactor Criticality Accident Alarm System Benchmark Overview

From the countless critical experiments performed in the world during the past century, high-quality integral benchmarks experiments have been collected and gathered into the International Handbook of Evaluated Criticality Safety Benchmark Experiments (ICSBEP Handbook), managed by the International Criticality Safety Benchmark Evaluation Project (ICSBEP) Working Group. This information preservation and dissemination effort is crucial for reactor licensing as well as criticality and radiation transport modeling validation. This summary reports on the status of a tentative benchmark addition to the ICSBEP Handbook. The proposed benchmark arises from legacy operation data of the Oak Ridge National Laboratory (ORNL) Health Physics Research Reactor (HPRR). The HPRR was a small, unmoderated, unshielded fast burst reactor that was used for research in health physics and radiobiology as well as teaching and training. As part of a comprehensive investigation of the available HPRR operation data and characteristics, different possibilities for use of the valuable results were studied. A critical experiment benchmark evaluation was performed, analyzing data coming from sub-critical and critical operation of the HPRR during operator training, steady-state irradiation of samples and before critical bursts. The results of the evaluation do not satisfy for the ICSBEP standards as the benchmark relative standard uncertainty is of about 4% for k eff , and the relative difference between sample calculations and expected k eff results is of about 1.5%. Due to those unsatisfactory results, it was decided not to pursue critical experiments evaluation of the HPRR presently and to focus instead on shielding type data for the creation of a criticality accident alarm system (CAAS) and shielding category benchmark, which is currently very scarce in the ICSBEP handbook—especially concerning critical, pulsed assembly, or reactor operation data. Several dosimetry and shielding experiments from HPRR burst operation were evaluated, with different benchmark metrics as sulfur fluence, Element 57 dose, or neutron fluence at different distances and under different shield materials conditions. An evaluation focusing on the Element 57 neutron dose as a benchmark metric was submitted to the ICSBEP Technical Review Group (TRG) meeting in October 2021, and the inclusion of the evaluation in the ICSBEP Handbook was deferred. The main change proposed by the international experiment evaluation experts is to use the neutron fluence measured by Bonner spheres as a benchmark metric. This represents a quantity closer to that actually measured by the experimentalists of the HPRR compared to the Element 57 dose, which adds another step of data transformation, thus potentially adding uncertainty to the benchmark. The evaluation has been updated and will be submitted to the 2022 ICSBEP TRG meeting for inclusion in the 2023 edition of the ICSBEP Handbook. The evaluation is performed using the KENO and MAVRIC combination from the SCALE 6.2.4 code suite which was previously used in similar CAAS benchmarks to allow for the use of variance reduction techniques.

61 RADIATION PROTECTION AND DOSIMETRY↗
DOE OSTI2026

Design of monolithic piezoelectric bimorph mirrors made from lithium niobate

Recent advances in deformable mirrors based on monolithic piezoelectric substrates, such as lithium niobate, have the potential to improve the image quality of X-ray optical systems on synchrotron and free-electron laser beamlines and microscopes. However, the quantitative relationship between design parameters and the deformed shape has not been readily available in the literature. We present an analytical model, validated through finite element analysis, enabling calculation of tangential and sagittal curvatures based on mirror dimensions, crystallographic orientation, and applied voltage. We demonstrate that through the selection of material orientation, it is possible to achieve different deformed shapes (sphere, cylinder, or hyperbolic paraboloid). This methodology can be generalized to other piezoelectric materials and substrate-integrated actuator systems.

Marzari, Francesco [University of Trento (Italy); ↗
DOE OSTI2024

EGS Collab Experiment 2: Microseismic Monitoring

This dataset contains continuous seismic waveform data recorded during stimulation and thermal circulation tests for the Enhanced Geothermal Systems (EGS) Collab Experiment #2, conducted from February to September 2022 at the Sanford Underground Research Facility in Lead, South Dakota. This experiment aimed to study and validate models of geothermal systems by injecting high-pressure fluids into rock formations 1200-1500 meters below the surface, inducing microseismic events. The seismic monitoring system included 16 three-component accelerometers and a 24-channel hydrophone array, installed in boreholes surrounding the test area. Data were recorded at high sampling rates using a continuous waveform recording system to monitor seismic activity in real time. The dataset contains the raw data stored in binary format, with files named based on timestamps, and includes calibration certificates for some sensors to facilitate corrections to real units. Users are strongly advised to consult the accompanying detailed report, which outlines the experimental setup, sensor specifications, installation procedures, and data processing methods. The report also describes important nuances, such as the hardware filters on hydrophones, sensor calibration details, and the naming conventions for the recorded data. Proper use of this dataset may require familiarity with seismic data analysis tools, such as the Obspy Python package, and an understanding of the SEED naming conventions used for channel identification.

15 GEOTHERMAL ENERGY↗
DOE OSTI2024

Bench Testing Data and Report for an Early Prototype Pitch Resonator WEC

This dataset encompasses data and documentation from bench tests conducted on an early prototype of a "pitch resonator" wave energy converter (WEC). The testing aimed to validate numerical models and reduce risks associated with the pitch resonator concept, which is designed to convert the pitching and rolling motions of a buoy into electrical power. The project's goal is to provide supplementary power, in the range of 10-100 watts, to the National Science Foundation's Ocean Observatories Initiative Pioneer Array. Two distinct testing phases are documented: one using a single degree of freedom (1DOF) test rig, and another employing a six degree of freedom (6DOF) Stewart platform, known as the Large Amplitude Motion Platform (LAMP). These tests assessed various factors, such as system performance in different motion scenarios, the torque exerted by wave forces, and the impact of mounting configurations. The dataset includes raw test data in MATLAB (.mat) format, detailed metadata, and a report describing the experimental procedures and preliminary findings.

16 TIDAL AND WAVE POWER↗
DOE OSTI2020

Flux Seasonality Metrics Database: A companion dataset for FLUXNET annual product

This dataset include standardized phenological transition dates, and derived season lengths of active, dormant and transition seasons of ecosystem carbon and energy fluxes, as reported in FLUXNET. Such metrics are unique in that they characterize the seasonal dynamics of these fluxes in their own terms rather than in reference to traditional phenology indicators that mostly relate to vegetation structural characteristics. The Flux Seasonality Metrics Database (FSMD) generated 17 standardized seasonality metrics for 4 different fluxes including gross primary productivity (GPP), ecosystem respiration (RE), latent heat (LE) and sensible heat (H) reported in FLUXNET2015 Dataset for about 200 sites and 1500 site-years of data globally. Each metric is reported as an estimate and a confidence interval, which is a function of data coverage and flux variability. We anticipate that the FSMD will facilitate new model validation exercises, and stimulate new research in global change and Earth science disciplines where land-atmosphere exchange dynamics play a central role.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

A compact furnace to support in situ neutron imaging of hydrogen dynamics in yttrium hydride moderators

A compact, nuclear microreactor that utilizes low-enriched uranium fuel is a promising solution to meet U.S. energy demands in nonconventional nuclear markets such as remote and decentralized energy grids. Yttrium hydride (YHx) is a potential moderator material for a microreactor design that reduces the amount of required fuel and provides superior retention of hydrogen at high reactor operating temperatures. Hydrogen diffusion properties in YHx are highly sought after for computer model validation and reactor prototyping. To characterize hydrogen diffusion, a compact dual-zone furnace was developed at Los Alamos National Laboratory and analyzed via neutron imaging at the Los Alamos Neutron Science Center (LANSCE). The goal of these measurements is to assess hydrogen diffusion in YHx samples as a function of applied temperature gradients. Included herein is recent progress in technique and furnace developments as well as initial results from concentration- and temperature-gradient measurements at LANSCE.

Torres, James↗
DOE OSTI2024

Enclosed Sydney Swirl Burner Experimental Data Set - Release 1.0

This submission includes a comprehensive data set for the NETL Enclosed Sydney Swirl Burner, generated between 2012 and 2014. The data set includes global parametric data and advanced diagnostic data for (3) flames of interest to CFD model validation. The submission includes a companion summary document describing the data and associated references.

Diagnostics↗
DOE OSTI2025

Extinction Monitoring of Pulsed Proton Beams Using FPGA-Based Peak Detection

The Mu2e experiment at Fermilab imposes stringent requirements on the elimination of out-of-time beam in its pulsed proton beam - a requirement known as "extinction". We present a method to measure the out-of-time particle rates to calculate the level of extinction in the inter-pulse gaps. The proposed method utilizes an array of quartz Cherenkov radiators and photomultiplier tubes to detect particles scattered from a vacuum chamber in the M4 transfer beamline at Fermilab.The measurement will employ a new μTCA-based FPGA system for data acquisition and signal processing, utilizing real-time peak detection algorithms to count scattered beam particles. By integrating data over many transfers, the time profile of the out-of-time beam will be resolved to fractional levels relative to that of the in-time beam. These results are compared with G4beamline simulations to validate models of beam transport, dynamics, and extinction, providing critical input for optimizing beam delivery to Mu2e.

Hensley, Ryan [UC, Davis]↗
DOE OSTI2016

Accelerated Leach Testing of GLASS: ALTGLASS Version 3.0

The Accelerated Leach Testing of GLASS (ALTGLASS) database is a collection of data from short- and long-term product consistency tests (PCT, ASTM C1285 A and B) on high level waste (HLW) as well as low activity waste (LAW) glasses. The database provides both U.S. and international researchers with an archive of experimental data for the purpose of studying, modeling, or validating existing models of nuclear waste glass corrosion. The ALTGLASS database is maintained and updated by researchers at the Savannah River National Laboratory (SRNL). This newest version, ALTGLASS Version 3.0, has been updated with an additional 503 rows of data representing PCT results from corrosion experiments conducted in the United States by the Savannah River National Laboratory, Pacific Northwest National Laboratory, Argonne National Laboratory, and the Vitreous State Laboratory (SRNL, PNNL, ANL, VSL, respectively) as well as the National Nuclear Laboratory (NNL) in the United Kingdom.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2017

Evolution in Cloud Population Statistics of the MJO: From AMIE Field Observations to Global-Cloud Permitting Models Final Report

This is a multi-institutional, collaborative project using a three-tier modeling approach to bridge field observations and global cloud-permitting models, with emphases on cloud population structural evolution through various large-scale environments. Our contribution was in data analysis for the generation of high value cloud and precipitation products and derive cloud statistics for model validation. There are two areas in data analysis that we contributed: the development of a synergistic cloud and precipitation cloud classification that identify different cloud (e.g. shallow cumulus, cirrus) and precipitation types (shallow, deep, convective, stratiform) using profiling ARM observations and the development of a quantitative precipitation rate retrieval algorithm using profiling ARM observations. Similar efforts have been developed in the past for precipitation (weather radars), but not for the millimeter-wavelength (cloud) radar deployed at the ARM sites.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2017

Thermocouple Errors when Mounted on Cylindrical Surfaces in Abnormal Thermal Environments.

Mineral-insulated, metal-sheathed, Type-K thermocouples are used to measure the temperature of various items in high-temperature environments, often exceeding 1000degC (1273 K). The thermocouple wires (chromel and alumel) are protected from the harsh environments by an Inconel sheath and magnesium oxide (MgO) insulation. The sheath and insulation are required for reliable measurements. Due to the sheath and MgO insulation, the temperature registered by the thermocouple is not the temperature of the surface of interest. In some cases, the error incurred is large enough to be of concern because these data are used for model validation, and thus the uncertainties of the data need to be well documented. This report documents the error using 0.062" and 0.040" diameter Inconel sheathed, Type-K thermocouples mounted on cylindrical surfaces (inside of a shroud, outside and inside of a mock test unit). After an initial transient, the thermocouple bias errors typically range only about +-1-2% of the reading in K. After all of the uncertainty sources have been included, the total uncertainty to 95% confidence, for shroud or test unit TCs in abnormal thermal environments, is about +-2% of the reading in K, lower than the +-3% typically used for flat shrouds. Recommendations are provided in Section 6 to facilitate interpretation and use of the results. .

47 OTHER INSTRUMENTATION↗
DOE OSTI2017

The VolturnUS 1:8 Floating Wind Turbine: Design, Construction, Deployment, Testing, Retrieval, and Inspection of the First Grid-Connected Offshore Wind Turbine in US

Volume II of the Final Report for the DeepCwind Consortium National Research Program funded by US Department of Energy Award Number: DE-EE0003278.001 summarizes the design, construction, deployment, testing, numerical model validation, retrieval, and post-deployment inspection of the VolturnUS 1:8-scale floating wind turbine prototype deployed off Castine, Maine on June 2nd, 2013. The 1:8 scale VolturnUS design served as a de-risking exercise for a commercial multi-MW VolturnUS design. The American Bureau of Shipping Guide for Building and Classing Floating Offshore Wind Turbine Installations was used to design the prototype. The same analysis methods, design methods, construction techniques, deployment methods, mooring, and anchoring planned for full-scale were used. A commercial 20kW grid-connected turbine was used and was the first offshore wind turbine in the US.

17 WIND ENERGY↗
DOE OSTI2017

CTF (Subchannel) Calculations and Validation L3:VVI.H2L.P15.01

The goal of the Verification and Validation Implementation (VVI) High to Low (Hi2Lo) process is utilizing a validated model in a high resolution code to generate synthetic data for improvement of the same model in a lower resolution code. This process is useful in circumstances where experimental data does not exist or it is not sufficient in quantity or resolution. Data from the high-fidelity code is treated as calibration data (with appropriate uncertainties and error bounds) which can be used to train parameters that affect solution accuracy in the lower-fidelity code model, thereby reducing uncertainty. This milestone presents a demonstration of the Hi2Lo process derived in the VVI focus area. The majority of the work performed herein describes the steps of the low-fidelity code used in the process with references to the work detailed in the companion high-fidelity code milestone (Reference 1). The CASL low-fidelity code used to perform this work was Cobra Thermal Fluid (CTF) and the high-fidelity code was STAR-CCM+ (STAR). The master branch version of CTF (pulled May 5, 2017 – Reference 2) was utilized for all CTF analyses performed as part of this milestone. The statistical and VVUQ components of the Hi2Lo framework were performed using Dakota version 6.6 (release date May 15, 2017 – Reference 3). Experimental data from Westinghouse Electric Company (WEC – Reference 4) was used throughout the demonstrated process to compare with the high-fidelity STAR results. A CTF parameter called Beta was chosen as the calibration parameter for this work. By default, Beta is defined as a constant mixing coefficient in CTF and is essentially a tuning parameter for mixing between subchannels. Since CTF does not have turbulence models like STAR, Beta is the parameter that performs the most similar function to the turbulence models in STAR. The purpose of the work performed in this milestone is to tune Beta to an optimal value that brings the CTF results closer to those measured in the WEC experiments.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

Structure and Dynamics of Materials Under Extreme Conditions- Final Report

The goals for the work were to create and probe matter under extreme conditions using ultrafast optical and x-ray techniques. We measured electronic structure and plasma properties of warm and hot dense matter, and validate modeling and simulation codes, with a goal of understanding the static and dynamic properties of such materials.

36 MATERIALS SCIENCE↗