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This paper presents the availability of SPICE products to the Planetary Science Community. The topics include: 1) What Are SPICE Data; 2) SPICE File Types; 3) SPICE Software; 4) Examples of What Can Be Computed Using SPICE Data and Software; and 5) SPICE File Avalability.
ESEM-EDS studies of an endolithic evaporite community from Death Valley revealed its ability to sequester water and affect the partitioning of trace metals in this environment. Additional information is contained in the original extended abstract.
Over the past decade NASA has designed, built, evolved, and operated the Earth Observing System Data and Information System (EOSDIS) Information Management System (IMS) in order to provide user access to NASA's Earth Science data holdings. During this time revolutionary advances in technology have driven changes in NASA's approach to providing an IMS service. This paper will describe NASA's strategic planning and approach to build and evolve the EOSDIS IMS and to serve the evolving needs of NASA's Earth Science community. It discusses the original strategic plan and how lessons learned help to form a new plan, a new approach and a new system. It discusses the original technologies and how they have evolved to today.
More than half the history of life on Earth was dominated by photosynthetic microbial mats, which must have represented the preeminent biological influence on global geochemical cycling during that time. In modem analogs of then ancient communities, hypersaline microbial mats from Guerrero Negro, Mexico, we have observed a large flux of molecular hydrogen originating in the cyanobacteria-dominated surface layers. Hydrogen production follows a distinct diel pattern and is sensitive to both oxygen tension and microbial species composition within the mat. On an early Earth dominated by microbial mats, the observed H2 fluxes would scale to global levels far in excess of geothermal emissions. A hydrogen flux of this magnitude represents a profound transmission of reducing power from oxygenic photosynthesis, both to the anaerobic biosphere, where H2 is an almost universally-utilized substrate and regulator of microbial redox chemistry, and to the atmosphere, where subsequent escape to space could provide an important mechanism for the net oxidation of Earth's surface.
Restriction Fragment Length Polymorphisms (RFLPs) analyses were used to determine patterns of change in ectomycorrhizal community structure response to seasonal warming and drying of soils. Soil cores (42 total, 21 from cold and wet soil in early June, and 21 from dry, warm soil in late August) were collected from replicate blocks in a mixed-conifer forest stand in Yellowstone. Results indicated no significant differences in species richness (2.62 species/core, SE 0.2 in June; 3.25, SE 0.2 in August), however there was a significant effect on ectomycorrhizal infection (P<0.05), mean number of EM tips/core was significantly lower in June (185.8, SE 34) than in August (337 SE 78). Data indicated no difference in overall EM fungal species composition, however among system dominants, two species (Cortinarius 9 and Cortinarius 10) were more abundant in August than in June (P<0.02). The remaining dominant fungal species exhibited no differences in relative abundance. Results are discussed in relation to soil fertility and composition.
One of the most difficult problems of life detection is that of identifying biosignatures across a wide range of scales using multiple co-registered probes. The technique should be of equal utility across a wide range of search spaces from remote sensors probing volumes of space or planetary surfaces, visual eye or camera searches across the surface of a rock in Antarctica, low resolution microscopic scanning of a rock or a space craft in situ, or high resolution electron microscope and computerized tomography scanning of geobiological samples. We describe here an approach to this problem which derives in large part from past work done in the area of astrophysics - namely the analysis of complexity in galactic signals by data compression methods. This approach is a radically new one for geobiology and astrobiology, and allows us to assess the complexity (and thus potential biogenicity) of an object being examined. This is done by considering the information within pixels of an image (regardless the sensor used to gather the information) as an energetic system capable of description in terms of classical thermodynamics. The image data space is searched by an algorithm that judges complexity via data compression (e.g., the more compressible it is, the less complex, and vice versa) and maximum entropy as originally outlined by Shannon. At present we are implementing methods to utilize images from multiple sensors gathering different kinds of information (e.g., visible gray-scale data, color analyses, UV fluorescence, chemical information, etc). We present here preliminary data from deep UV fluorescence and ESEM (Environmental Scanning Electron Microscope) images from a layered cryptoendolithic community of an Antarctic rock.
An interdisciplinary team at the Jet Propulsion Laboratory Center for Life Detection has embarked on a project to provide in situ chemical and morphological characterization of Antarctic cryptoendolithic microbial communities. We present here in situ deep ultraviolet (UV) native fluorescence and environmental scanning electron microscopy images transiting 8.5 mm into a sandstone sample from the Antarctic Dry Valleys. The deep ultraviolet imaging system employs 224.3, 248.6, and 325 nm lasers to elicit differential fluorescence and resonance Raman responses from biomolecules and minerals. The 224.3 and 248.6 nm lasers elicit a fluorescence response from the aromatic amino and nucleic acids. Excitation at 325 nm may elicit activity from a variety of biomolecules, but is more likely to elicit mineral fluorescence. The resultant fluorescence images provide in situ chemical and morphological maps of microorganisms and the associated organic matrix. Visible broadband reflectance images provide orientation against the mineral background. Environmental scanning electron micrographs provided detailed morphological information. The technique has made possible the construction of detailed fluorescent maps extending from the surface of an Antarctic sandstone sample to a depth of 8.5 mm. The images detect no evidence of microbial life in the superficial 0.2 mm crustal layer. The black lichen component between 0.3 and 0.5 mm deep absorbs all wavelengths of both laser and broadband illumination. Filamentous deep ultraviolet native fluorescent activity dominates in the white layer between 0.6 mm and 5.0 mm from the surface. These filamentous forms are fungi that continue into the red (iron-rich) region of the sample extending from 5.0 to 8.5 mm. Using differential image subtraction techniques it is possible to identify fungal nuclei. The ultraviolet response is markedly attenuated in this region, apparently from the absorption of ultraviolet light by iron-rich particles coating the filaments. Below 8.5 mm the filamentous morphology of the upper layers gives way to punctate 1-2 micron particles evidencing fluorescent activity following excitation at both deep ultraviolet wavelengths.
To survive in deep subsurface environments autolithotrophic microbial communities require a sustainable food supply. One possible source is H2 which forms when H2O reacts with ferrous iron at rock surfaces or mineral grain boundaries to produce H2 plus ferric iron. The amount of H2 that can be supplied in this way, however, is relatively small and may not last for more than a few hundred or thousand years. A much larger reservoir of H2 exists in the rocks, inside mineral grains, arising from an as yet little-known redox conversion that affects OH- in nominally anhydrous minerals. These OH- represent small amounts of "water" that become incorporated during crystallization in H2O-laden environments. A corollary of the H2 formation from OH- is the formation of peroxy, an oxidized form of oxygen. While the peroxy become part of the mineral structure, the H2 molecules are diffusively mobile and can escape from within the mineral grains, entering the intergranular space. Assuming cautiously realistic number densities of OH- undergoing the in situ redox conversion to H2 plus peroxy, a 10 km deep rock column is expected to contain enough H2 to allow for a constant degassing rate of 50-100 nmole H2 per day per sq cm over 30 million years.
Microbial mats are our earliest, and most pervasive evidence of life on Earth. In addition to their importance as the crucible of microbial evolution on Earth, microbial mats may be important in our search for life outside of our solar system. This lecture will introduce various types of microbial mats, and their fossilized counterparts, stromatolites by presenting examples of these communities. Biogeochemical cycles important in microbial mats will be introduced and discussed.
Task Order 33 had four primary objectives as follows: (1) Identify and prioritize the airframe noise reduction technologies needed to accomplish the NASA Pillar goals for business and regional aircraft. (2) Develop a model to estimate the effect of jet shear layer refraction and attenuation of internally generated source noise of a turbofan engine on the aircraft system noise. (3) Determine the effect on community noise of source noise changes of a generic turbofan engine operating from sea level to 15,000 feet. (4) Support lateral attenuation experiments conducted by NASA Langley at Wallops Island, VA, by coordinating opportunities for Contractor Aircraft to participate as a noise source during the noise measurements. Noise data and noise prediction tools, including airframe noise codes, from the NASA Advanced Subsonic Technology (AST) program were applied to assess the current status of noise reduction technologies relative to the NASA pillar goals for regional and small business jet aircraft. In addition, the noise prediction tools were applied to evaluate the effectiveness of airframe-related noise reduction concepts developed in the AST program on reducing the aircraft system noise. The AST noise data and acoustic prediction tools used in this study were furnished by NASA.
Under this grant we have developed a Monte Carlo radiative transfer code that will act as the nucleus for the 13RC Community Monte Carlo Model. All code is written in ANSI-compliant Fortran-95. Many modules define public type and procedures to manipulate them, but do not allow access to the type's internal components. This allows each module to do its own exhaustive error checking up-front, then proceed in a streamlined way. Many modules can read and write the state of their objects to persistent files. The code has been tested on a Macintosh running OS 10.2.4 and the Absoft Fortran compiler, and on Sun UltraSparcs running Solaris 5.8 and Forte V8 compilers. The code exposed bugs in the Intel Fortran Compiler (ifc) on the 13RC Linux host, and we are waiting for a resolution of these bugs before finished the port. the code base is under CVS versions control. The code base consists of the core code (nine modules providing the infrastructure), example integrators, and a suite of utilities and examples.
The longterm wildfire dynamics, including fire return interval (FRI), in Siberian larch communities were examined. A wildfire chronology encompassing the 15th through the 20th centuries was developed from analyzing tree stem fire scars. Two methods were used to calculate the time interval between fires: 1) direct counting of annual tree growth rings between stem fire scars and 2) the next earlier fire date was estimated from growth ring analysis and added to the first estimate. Average FRI determined from stem fire scar dating was 82 plus or minus 7 using Method I or 95 plus or minus 7 when age of the next earlier fire was inferred from observed larch regeneration structure (Method II). FRI was also found to be dependent on site topography. FRI on north-east facing slopes was 86 plus or minus 11 years (105 plus or minus 12). FRI on south-west facing slopes was significantly less at 61 plus or minus 8 (73 plus ot minus 8) years. Flat terrain showed little difference between methods 68 plus or minus 14 (70 plus or minus 13). This was also the case for bogs, but FRI was much longer; 139 plus or minus 17 (138 plus ot minus 18). The maximum number of annual fires occurred with periods of 36 and 82 years on average. The temporal trend in the FRI decreased from 101 years in the 19 th century to 65 years in the 20th century. The effect of post-fire forest recovery on depth to permafrost was also estimated. After initial melting from increased local temperatures permafrost depth decreased at a rate of 0.3 cm/yr on average as forest canopies developed.
In this study, the NCAR CLM version 2.0 land-surface model was integrated into the NASA/NCAR fvGCM. The CLM was developed collaboratively by an open interagency/university group of scientists and based on well-proven physical parameterizations and numerical schemes that combine the best features of BATS, NCAR-LSM, and IAP94. The CLM design is a one-dimensional point model with 1 vegetation layer, along with sub-grid scale tiles. The features of the CLM include 10-uneven soil layers with water, ice, and temperature states in each soil layer, and five snow layers, with water flow, refreezing, compaction, and aging allowed. In addition, the CLM utilizes two-stream canopy radiative transfer, the Bonan lake model and topographic enhanced streamflow based on TOPMODEL. The DAO fvGCM uses a genuinely conservative Flux-Form Semi-Lagrangian transport algorithm along with terrain- following Lagrangian control-volume vertical coordinates. The physical parameterizations are based on the NCAR Community Atmosphere Model (CAM-2). For our purposes, the fvGCM was run at 2 deg x 2.5 deg horizontal resolution with 55 vertical levels. The 10-year climate from the fvGCM with CLM2 was intercompared with the climate from fvGCM with LSM, ECMWF and NCEP. We concluded that the incorporation of CLM2 did not significantly impact the fvGCM climate from that of LSM. The most striking difference was the warm bias in the CLM2 surface skin temperature over desert regions. We determined that the warm bias can be partially attributed to the value of the drag coefficient for the soil under the canopy, which was too small resulting in a decoupling between the ground surface and the canopy. We also discovered that the canopy interception was high compared to observations in the Amazon region. A number of experiments were then performed focused on implementing model improvements. In order to correct the warm bias, the drag coefficient for the soil under the canopy was considered a function of LAI (Leaf Area Index). Analysis of the results revealed that there was a substantial impact, and the warm and dry bias in the CLM2 was significantly reduced. For the interception scheme, the canopy throughfall was increased to allow for more infiltration of precipitation into the soil, resulting in increased low-level moisture and a decrease in the interception loss ratio (canopy evaporation to precipitation).
Community-level physiological profiling based upon fluorometric detection of oxygen consumption was performed on hydroponic rhizosphere and salt marsh litter samples by using substrate levels as low as 50 ppm with incubation times between 5 and 24 h. The rate and extent of response were increased in samples acclimated to specific substrates and were reduced by limiting nitrogen availability in the wells.
To survive in deep subsurface environments, lithotrophic microbial communities require a sustainable energy source such as hydrogen. Though H2 can be produced when water reacts with fresh mineral surfaces and oxidizes ferrous iron, this reaction is unreliable since it depends upon the exposure of fresh rock surfaces via the episodic opening of cracks and fissures. A more reliable and potentially more voluminous H2 source exists in nominally anhydrous minerals of igneous and metamorphic rocks. Our experimental results indicate that H2 molecules can be derived from small amounts of H2O dissolved in minerals in the form of hydroxyl, OH- or O3Si-OH, whenever such minerals crystallized in an H2O-laden environment. Two types of experiments were conducted. Single crystal fracture experiments indicated that hydroxyl pairs undergo an in situ redox conversion to H2 molecules plus peroxy links, O3Si/OO\SiO3. While the peroxy links become part of the mineral structure, the H2 molecules diffused out of the freshly fractured mineral surfaces. If such a mechanism occurred in natural settings, the entire rock column would become a volume source of H2. Crushing experiments to facilitate the outdiffusion of H2 were conducted with common crustal igneous rocks such as granite, andesite, and labradorite. At least 70 nmol of H2/g diffused out of coarsely crushed andesite, equivalent at standard pressure and temperature to 5,000 cm3 of H2/m3 of rock. In the water-saturated, biologically relevant upper portion of the rock column, the diffusion of H2 out of the minerals will be buffered by H2 saturation of the intergranular water film.
CO2 and water vapor fluxes of hydroponically grown wheat and soybean canopies were measured continuously in several environments with an open gas exchange system. Canopy CO2 fluxes reflect the photosynthetic efficiency of a plant community, and provide a record of plant growth and health. There were significant diurnal fluctuations in root and shoot CO2 fluxes, and in shoot water vapor fluxes. Canopy stomatal conductance (Gc) to water vapor was calculated from simultaneous measurements of canopy temperature (Tcan) and transpiration rates (Tr). Tr in the dark was substantial, and there were large diurnal fluctuations in both Gc and Tr. Canopy net Photosynthesis (Pnet), Tr, and Gc increased with increasing net radiation. Gc increased with Tr, suggesting that the stomata of plants in controlled environments (CEs) behave differently from field-grown plants. A transpiration model based on measurements of Gc was developed for CEs. The model accurately predicted Tr from a soybean canopy.
A fiber-optic microphobe was used to analyze the spectral light gradients in benthic cyanobacterial mats with 50-micrometer depth resolution and 10-nm spectral resolution. Microcoleus chthononplastes mats were collected from hypersaline, coastal ponds at Guerrero Negro, Baja California. Gradients of spectral radiance, L, were measured at different angles through the mats and the spherically integrated scalar irradiance, Eo, was calculated. Maximal spectral light attenuation was found at the absorption peaks for the dominant photosynthetic pigments: chlorophyll a at 430 and 670 nm, carotenoids at 450-500 nm, phycocyanin at 620 nm, and bacteriochlorophyll a at 800-900 nm. Scattered light had a marked spectral effect on the scalar irradiance which near the mat surface reached up to 190% of the incident irradiance. The spherically integrated irradiance thus differed strongly from the incident irradiance both in total intensity and in spectral composition. These basic optical properties are important for the understanding of photosynthesis and light harvesting in benthic and epiphytic communities.
The Atmospheric Sciences Data Center (ASDC) at NASA s Langley Research Center houses over 700 data sets related to Earth s radiation budget, clouds, aerosols and tropospheric chemistry. These data sets are produced to increase academic understanding of the natural and anthropogenic perturbations that influence global climate change. The Mentoring and inquirY using NASA Data on Atmospheric and earth science for Teachers and Amateurs (MY NASA DATA) project has been established to systematically support educational activities at all levels of formal and informal education by reducing these large data holdings to microsets that will be easily explored and understood by the K-12 and the amateur scientist communities