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At least 1,387 records · Page 77
All sourcesNASA NTRSDOE OSTI
DOE OSTI2016

Energy landscape in protein folding and unfolding

Protein folding represents an open question in science, and the free-energy landscape framework is one way to describe it. In particular, the role played by water in the processes is of special interest. To clarify these issues we study, during folding–unfolding, the temperature evolution of the magnetization for hydrophilic and hydrophobic groups of hydrated lysozyme using NMR spectroscopy. Our findings confirm the validity of the theoretical scenario of a process dominated by different energetic routes, also explaining the water role in the protein configuration stability. Here, we also highlight that the protein native state limit is represented by the water singular temperature that characterizes its compressibility and expansivity and is the origin of the thermodynamical anomalies of its liquid state.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS2005

Reactive Additives for Phenylethynyl-Containing Resins

Phenylethynyl-containing reactive additive (PERA) compounds and mixtures have been found to be useful for improving the processability of oligomers, polymers, co-oligomers, and copolymers that contain phenylethynyl groups. The additives can be incorporated in different forms: A solution of an amide acid or an imide of a PERA can be added to a solution of phenylethynyl-containing oligomer, polymer, co-oligomer, or copolymer; or An imide powder of a PERA can be mixed with a dry powder of a phenylethynyl-containing oligomer, polymer, co-oligomer, or copolymer. The effect of a given PERA on the processability and other properties of the resin system depends on whether the PERA is used in the amide acid or an imide form. With proper formulation, the PERA reduces the melt viscosity of the resin and thereby reduces the processing pressures needed to form the adhesive bonds, consolidate filled or unfilled moldings, or fabricate fiber-reinforced composite laminates. During thermal cure, a PERA reacts with itself as well as with the phenylethynyl-containing host resin and thereby becomes chemically incorporated into the resin system. The effects of the PERA on mechanical properties, relative to those of the host resin, depend on the amount of PERA used. Typically, the incorporation of the PERA results in (1) increases in the glass-transition temperature (Tg), modulus of elasticity, and parameters that characterize behavior under compression, and (2) greater retention of the aforementioned mechanical properties at elevated temperatures without (3) significant reduction of toughness or damage tolerance. Of the formulations tested thus far, the ones found to yield the best overall results were those for which the host resin was the amide acid form of a phenylethynyl-terminated imide (PETI) co-oligomer having a molecular weight of 5,000 g/mole [hence, designated PETI-5] and a PERA denoted as PERA-1. PETI-5 was made from 3,3',4'4'-biphenyltetracarboxylic dianhydride, 3,4'-oxydianiline (3,4'-ODA), 1,3-bis(3-aminophenoxy) benzene (1,3-APB), and 4-phenylethynylphthalic anhydride (PEPA). PERA-1 was made from 3,5-diamino- 4.-phenylethynylbenzophenon and equimolar amounts of phthalic anhydride and PEPA. To make PERA-1 in the imide form, the aforementioned ingredients were processed by refluxing in glacial acetic acid. To make the amide form of PERA-1, the ingredients were reacted in N-methyl-2-pyrrolidinone (NMP) under nitrogen at a temperature of 23 C (see figure). On the basis of the processability and other properties, a blend comprising 20 weight percent of PERA-1 and 80 weight percent PETI-5 was selected for further evaluation. Relative to neat PETI-5, the blend exhibited an increase in Tg; improved processability; and comparable values of shear strength in adhesion to titanium panels, open-hole compressive properties, compression properties after impact, and resistance to microcracking.

Connell, John W.↗
NASA NTRS1982

Anomalous phase separation behavior of gel-derived soda-silica glasses

The effects of retained bound hydroxyl groups on amorphous immiscibility behavior and on the kinetics of phase separation were studied in glasses containing from 10 to 19 percent sodium oxide preparaed by the gel process. Differences in behavior as functions of preliminary thermal treatment of the gel precursor and of melting conditions were studied, employing IR spectroscopy, SAXS and WAXD to monitor the variation in glass microstructure. Both the initial gel treatment and the OH concentration in the prepared glasses were found to affect the immiscibility temperatures, and the magnitude of the maximum temperature increase was also a function of the sodium oxide concentration. It is suggested that the variation in thermodynamic behavior may be caused by the structural arrangement attained by the OH groups during the gel condensation process, which in turn affects the extent of hydrogen bonding to nonbridging oxygen ions.

Neilson, G. F.↗
DOE OSTI2022

An In-Depth Exploration of the Electrochemical Oxygen Reduction Reaction (ORR) Phenomenon on Carbon-Based Catalysts in Alkaline and Acidic Mediums

Detailed studies of the electrochemical oxygen reduction reaction (ORR) on catalyst materials are crucial to improving the performance of different electrochemical energy conversion and storage systems (e.g., fuel cells and batteries), as well as numerous chemical synthesis processes. In the effort to reduce the loading of expensive platinum group metal (PGM)-based catalysts for ORR in the electrochemical systems, many carbon-based catalysts have already shown promising results and numerous investigations on those catalysts are in progress. Most of these studies show the catalyst materials’ ORR performance as current density data obtained through the rotating disk electrode (RDE), rotating ring-disk electrode (RRDE) experiments taking cyclic voltammograms (CV) or linear sweep voltammograms (LSV) approaches. However, the provided descriptions or interpretations of those data curves are often ambiguous and recondite which can lead to an erroneous understanding of the ORR phenomenon in those specific systems and inaccurate characterization of the catalyst materials. In this paper, we presented a study of ORR on a newly developed carbon-based catalyst, the nitrogen-doped graphene/metal-organic framework (N-G/MOF), through RDE and RRDE experiments in both alkaline and acidic mediums, taking the LSV approach. The functions and crucial considerations for the different parts of the RDE/RRDE experiment such as the working electrode, reference electrode, counter electrode, electrolyte, and overall RDE/RRDE process are delineated which can serve as guidelines for the new researchers in this field. Experimentally obtained LSV curves’ shapes and their correlations with the possible ORR reaction pathways within the applied potential range are discussed in depth. We also demonstrated how the presence of hydrogen peroxide (H2O2), a possible intermediate of ORR, in the alkaline electrolyte and the concentration of acid in the acidic electrolyte can maneuver the ORR current density output in compliance with the possible ORR pathways.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2024

Overcoming the doping limit in GaAs by ion implantation and pulsed laser melting

Most semiconductors exhibit a saturation of free carriers when heavily doped with extrinsic dopants. This carrier saturation or “doping limit” is known to be related to the formation of native compensating defects, which, in turn, depends on the energy positions of their conduction band minimum and valence band maximum. Here, we carried out a systematic study on the n-type doping limit of GaAs via ion implantation and showed that this doping limitation can be alleviated by the transient process of pulsed laser melting (PLM). For n-type doping, both group VI (S) and amphoteric group IV (Si and Ge) dopants were implanted in GaAs. For comparison, p-type doping was also studied using Zn as the acceptor. Implanted dopants were activated by the PLM method, and the results are compared to rapid thermal annealing (RTA). Our results reveal that for all n-type dopants, while implantation followed by the RTA results in a similar saturation electron concentration of 2–3 × 10 18 cm –3 , the transient PLM process is capable of trapping high concentration of dopants in the substitutional site, giving rise to a carrier concentration of >10 19 cm –3 , exceeding the doping limit of GaAs. However, due to scatterings from point defects generated during PLM, the mobility of n-type GaAs after PLM is low (~80–260 cm 2 /V s). Subsequent RTA after PLM (PLM + RTA) is able to remove these point defects and recover the mobility to ~1000–2000 cm2/V s. The carrier concentrations of these PLM + RTA samples are reduced but are still a factor of 3 higher than RTA only GaAs. This can be understood as the dopants are already incorporated in the substitutional site after PLM; they are less likely to be “deactivated” by subsequent RTA. This work is significant to the understanding of doping mechanisms in semiconductors and provides a means for device applications, which require materials with ultra-high doping.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2015

Sintered tantalum carbide coatings on graphite substrates: Highly reliable protective coatings for bulk and epitaxial growth

Highly reliable low-cost protective coatings have been sought after for use in crucibles and susceptors for bulk and epitaxial film growth processes involving wide bandgap materials. Here, we propose a production technique for ultra-thick (50–200 μmt) tantalum carbide (TaC) protective coatings on graphite substrates, which consists of TaC slurry application and subsequent sintering processes, i.e., a wet ceramic process. Structural analysis of the sintered TaC layers indicated that they have a dense granular structure containing coarse grain with sizes of 10–50 μm. Furthermore, no cracks or pinholes penetrated through the layers, i.e., the TaC layers are highly reliable protective coatings. The analysis also indicated that no plastic deformation occurred during the production process, and the non-textured crystalline orientation of the TaC layers is the origin of their high reliability and durability. The TaC-coated graphite crucibles were tested in an aluminum nitride (AlN) sublimation growth process, which involves extremely corrosive conditions, and demonstrated their practical reliability and durability in the AlN growth process as a TaC-coated graphite. The application of the TaC-coated graphite materials to crucibles and susceptors for use in bulk AlN single crystal growth, bulk silicon carbide (SiC) single crystal growth, chemical vapor deposition of epitaxial SiC films, and metal-organic vapor phase epitaxy of group-III nitrides will lead to further improvements in crystal quality and reduced processing costs.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2021

Convective-Environmental Interactions in the Tropics

During the four years of this grant performance, the PI and her research group have made a number of significant contributions toward better understanding convective processes over the Amazon. First, she made available to the broader community a two-year data set of convective storm metrics based on SIPAM radar data from the central Amazon that has been utilized widely. Second, her students analyzed cold pool and heating characteristics of Amazonian convection and showed in heretofore unknown ways how both can impact new convective initiation (e.g., through multiple cold pool interactions and gravity waves formed via pulsed heating). Finally, her group more broadly showed how Amazonian and Indian Ocean convection interacts with the large-scale environment, especially low-level winds (e.g., the nocturnal Amazonian low-level jet) and deeper tropospheric moisture, to help it organize and how this interaction is represented in climate models.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2016

Studies in High Energy Heavy Ion Nuclear Physics

This close-out report covers the period 1994 - 2015 for DOE grant DE-FG02-94ER40845 with the University of Texas at Austin. The research was concerned with studies of the strong nuclear force and properties of nuclear matter under extreme conditions of temperature and density which far exceed that in atomic nuclei. Such extreme conditions are briefly created (for about 10 trillionths of a trillionth of a second) during head-on collisions of large atomic nuclei (e.g. gold) colliding at speeds very close to the speed-of-light. The collisions produce thousands of subatomic particles, many of which are detected in our experiment called STAR at the Relativistic Heavy-Ion Collider at the Brookhaven National Lab in New York. The goal of our research is to learn how the strong nuclear force and its fundamental particles (quarks and gluons) behave in extreme conditions similar to that of the early Universe when it was about 1 micro-second old, and in the cores of very dense neutron stars. To learn anything new about the matter which exists for such a very short amount of time requires carefully designed probes. In our research we focused on two such probes, one being short-lived resonance particles and the other using correlations between pairs of the detected particles. Resonances are short-lived particles created in the collision, which interact with the surrounding matter, and which break apart, or "decay" into more stable particles which survive long enough to be seen in our detectors. The dependence of resonance properties on the conditions in the collision system permit tests of theoretical models and improve our understanding. Dynamical interactions in the matter also leave imprints on the final, outgoing particle distributions measured in the experiment. In particular, angular correlations between pairs of particles can be related to the fundamental strong force as it behaves in the hot, dense matter. Studying correlations as a function of experimentally controlled conditions of the collisions provides another test of theory. Our results provide unambiguous evidence that the briefly existing hot, dense matter has strong effects on the measurements and indicate that the matter is best described in terms of the fundamental quarks and gluons, that its internal interactions are surprisingly strong, and that new and never before seen strong interaction processes are occurring which remain to be explained theoretically. To enable these studies our group has also made substantial contributions to the detection capabilities of the STAR experiment. These contributions were to the electronics required to "read out" the weak electrical signals from the detectors and transfer the raw data to offline computers for processing. Although this experimental program is now concluded, the resonance and correlation results we have extracted from the raw collision data will continue to challenge and perhaps guide theoretical developments of the strong nuclear force for many years to come.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2015

LANGMUIR WAVE DECAY IN INHOMOGENEOUS SOLAR WIND PLASMAS: SIMULATION RESULTS

Langmuir turbulence excited by electron flows in solar wind plasmas is studied on the basis of numerical simulations. In particular, nonlinear wave decay processes involving ion-sound (IS) waves are considered in order to understand their dependence on external long-wavelength plasma density fluctuations. In the presence of inhomogeneities, it is shown that the decay processes are localized in space and, due to the differences between the group velocities of Langmuir and IS waves, their duration is limited so that a full nonlinear saturation cannot be achieved. The reflection and the scattering of Langmuir wave packets on the ambient and randomly varying density fluctuations lead to crucial effects impacting the development of the IS wave spectrum. Notably, beatings between forward propagating Langmuir waves and reflected ones result in the parametric generation of waves of noticeable amplitudes and in the amplification of IS waves. These processes, repeated at different space locations, form a series of cascades of wave energy transfer, similar to those studied in the frame of weak turbulence theory. The dynamics of such a cascading mechanism and its influence on the acceleration of the most energetic part of the electron beam are studied. Finally, the role of the decay processes in the shaping of the profiles of the Langmuir wave packets is discussed, and the waveforms calculated are compared with those observed recently on board the spacecraft Solar TErrestrial RElations Observatory and WIND.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Recent Updates in ETOE-2 and MC 2 -3

The MC 2 -3 code is a multigroup cross section generation code for fast reactor applications, developed by Argonne National Laboratory (ANL) under the DOE Nuclear Energy Advanced Modeling and Simulation (NEAMS) program. In this work, first, the cross section libraries for ENDF/B-VII.1 and ENDF/B-VIII.0 data were generated using the updated ETOE-2 code. Preliminary verification and validation tests of the ENDF/B-VII.1 MC 2 -3 library were performed with the selected fast reactor benchmark problems. Processing and verifying the libraries suggested that significant efforts would be required for thoroughly verifying the ENDF/B-VII.1 MC 2 -3 library and successfully processing the ENDF/B-VIII.0 MC 2 -3 library. Secondly, the cross section generation capability of MC 2 -3 was updated with the intermediate group lattice calculation and the equivalent Dancoff-factor cell (EDC) method to significantly improve the performance of a twodimensional assembly calculation using the method of characteristics (MOC). This effort was made useful in implementing and verifying the EDC method in the Griffin cross section API. Finally, we analyzed a SFR problem, for which unusually large deviations in core eigenvalues from Monte Carlo solutions were reported, by generating multigroup cross sections with MC 2 -3, performing core calculations with DIF3D-VARIANT, and analyzing cross section and eigenvalue results against Monte Carlo solutions. The analysis confirmed that the MC 2 -3/DIF3D solutions were in good agreement with Monte Carlo solutions, providing the correct process of accurately generating broad-group cross sections with MC 2 -3

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

Quantization of anomaly coefficients in 6D N = ( 1 , 0 ) supergravity

We obtain new constraints on the anomaly coefficients of 6D N = ( 1 , 0 ) supergravity theories using local and global anomaly cancellation conditions. We show how these constraints can be strengthened if we assume that the theory is well-defined on any spin space-time with an arbitrary gauge bundle. We distinguish the constraints depending on the gauge algebra only from those depending on the global structure of the gauge group. Our main constraint states that the coefficients of the anomaly polynomial for the gauge group G should be an element of 2H 4 (BG; Z) $\otimes$ Λ S where Λ S is the unimodular string charge lattice. We show that the constraints in their strongest form are realized in F-theory compactifications. In the process, we identify the cocharacter lattice, which determines the global structure of the gauge group, within the homology lattice of the compactification manifold.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
NASA NTRS2000

Jovian Substorms: A Study of Processes Leading to Transient Behavior in the Jovian Magnetosphere

Solar system magnetospheres can be divided into two groups: induced and intrinsic. The induced magnetospheres are produced in the solar wind interaction of the magnetized solar wind with planetary obstacles. Examples of these magnetospheres are those of comets, Venus and Mars. Intrinsic magnetospheres are the cavities formed in the solar wind by the magnetic fields produced by dynamo current systems inside the planets: Mercury, Earth, Jupiter, Saturn, Uranus and Neptune are known to have intrinsic magnetospheres. Intrinsic magnetospheres can be further subdivided as to how the circulating plasma is driven by external or internal processes. The magnetospheres of Mercury and Earth are driven by the solar wind. The magnetospheres of Jupiter and possibly of Saturn are principally driven by internal processes. These processes provide the energy for the powerful jovian radio signals that can be detected easily on the surface of the Earth.

Russell, C. T.↗
DOE OSTI2013

Dispersion states and acid properties of SiO{sub 2}-supported Nb{sub 2}O{sub 5}

Nb{sub 2}O{sub 5}/SiO{sub 2} samples were prepared by the incipient-wetness impregnation method using niobium oxalate aqueous solution. The microstructure and dispersion process of the niobia species supported on SiO{sub 2} were characterized by means of power X-ray diffraction (XRD), laser Raman spectroscopy (LRS), and UV–vis diffuse reflectance spectroscopy (UV–vis DRS). The acid properties were investigated by the method of Hammett indicator and Pyridine adsorption infrared (Py-IR) spectroscopy. The results showed that the dispersion process of Nb{sub 2}O{sub 5} was performed by consuming surface hydroxyl groups of the amorphous SiO{sub 2} support. The aggregation of niobia species led to the formation of microcrystalline particles, so that there was no a clear monolayer dispersion capacity for Nb{sub 2}O{sub 5} supported on amorphous SiO{sub 2}. Furthermore, the catalytic activities of the as-prepared samples were evaluated by the condensation reaction of iso-butene (IB) and iso-butyraldehyde (IBA) to form 2,5-dimethyl-2,4-hexadiene (DMHD). The catalytic activities of the as-prepared samples for the condensation and their acid properties were strongly affected by the dispersion states. - Graphical abstract: The acid amount and strength of Nb{sub 2}O{sub 5}/SiO{sub 2} samples varied with the increase of Nb{sub 2}O{sub 5} loading. The catalytic activities of the as-prepared samples for the condensation and their acid properties were strongly affected by the dispersion states. - Highlights: • The dispersed process of Nb{sub 2}O{sub 5} was completed by consuming surface hydroxyl groups of SiO{sub 2}. • XRD quantitative phase analysis is not applicable for oxides dispersing on amorphous support. • The catalytic activity of Nb{sub 2}O{sub 5}/SiO{sub 2} is closely related to the dispersion state of SiO{sub 2}.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
NASA NTRS1991

Systems engineering studies of on-orbit assembly operation

While the practice of construction has a long history, the underlying theory of construction is relatively young. Very little has been documented as to techniques of logistic support, construction planning, construction scheduling, construction testing, and inspection. The lack of 'systems approaches' to construction processes is certainly one of the most serious roadblocks to the construction of space structures. System engineering research efforts at CSC are aimed at developing concepts and tools which contribute to a systems theory of space construction. The research is also aimed at providing means for trade-offs of design parameters for other research areas in CSC. Systems engineering activity at CSC has divided space construction into the areas of orbital assembly, lunar base construction, interplanetary transport vehicle construction, and Mars base construction. A brief summary of recent results is given. Several models for 'launch-on-time' were developed. Launch-on-time is a critical concept to the assembly of such Earth-orbiting structures as the Space Station Freedom, and to planetary orbiters such as the Mars transfer vehicle. CSC has developed a launch vehicle selection model which uses linear programming to find optimal combinations of launch vehicles of various sizes (Atlas, Titan, Shuttles, HLLV's) to support SEI missions. Recently, the Center developed a cost trade-off model for studying on orbit assembly logistics. With this model it was determined that the most effective size of the HLLV would be in the range of 120 to 200 metric tons to LEO, which is consistent with the choices of General Stafford's Synthesis Group Report. A second-generation Dynamic Construction Activities Model ('DYCAM') process model has been under development, based on our past results in interruptability and our initial DYCAM model. This second-generation model is built on the paradigm of knowledge-based expert systems. It is aimed at providing answers to two questions: (1) what are some necessary or sufficient conditions for judging conceptual designs of spacecraft?, and (2) can a methodology be formulated such that these conditions may be used to provide computer-aided tools for evaluating conceptual designs and planning for space assembly sequences? Early simulation results indicate that the DYCAM model has a clear ability to emulate and simulate human orbital construction processes.

Morgenthaler, George W.↗
NASA NTRS2001

The Continuing Evolution of Land Surface Parameterizations

Land surface models (LSMs) play a critical role in the simulation of climate, for they determine the character of a large fraction of the atmosphere's lower boundary. The LSM partitions the net radiative energy at the land surface into sensible heat, latent heat, and energy storage, and it partitions incident precipitation water into evaporation, runoff, and water storage. Numerous modeling experiments and the existing (though very scant) observational evidence suggest that variations in these partitionings can feed back on the atmospheric processes that induce them. This land-atmosphere feedback can in turn have a significant impact on the generation of continental precipitation. For this and other reasons (including the role of the land surface in converting various atmospheric quantities, such as precipitation, into quantities of perhaps higher societal relevance, such as runoff), many modeling groups are placing a high emphasis on improving the treatment of land surface processes in their models. LSMs have evolved substantially from the original bucket model of Manabe et al. This evolution, which is still ongoing, has been documented considerably. The present paper also takes a look at the evolution of LSMs. The perspective here, though, is different - the evolution is considered strictly in terms of the 'balance' between the formulations of evaporation and runoff processes. The paper will argue that a proper balance is currently missing, largely due to difficulties in treating subgrid variability in soil moisture and its impact on the generation of runoff.

Koster, Randal↗
DOE OSTI2018

Amino-Modified Halloysite Nanotubes to Reduce Polymer Degradation and Improve the Performance of Mechanically Recycled Poly(lactic acid)

From an environmental point of view, mechanical recycling is, in general, a good end-of-life option for poly(lactic acid) (PLA), one of the most important biobased polymers. However, the degradation of PLA during the service life and, especially, during the mechanical recycling process, leads to a decrease in the properties of PLA, thus reducing the applications of the recycled plastic. The main aim of this work was to study the addition of small amounts of halloysite nanotubes, during the recycling step, as the basis of a cost-effective method for improving the properties of the recycled PLA. Raw halloysite was modified with an aminosilane, and 2% by weight of both raw and modified halloysite were melt compounded with PLA previously subjected to accelerated ageing. The addition of the nanotubes led to recycled materials with improved properties because halloysite reduces the degradation of PLA by blocking the carboxyl groups, generated during the ageing and washing steps, which catalyze the degradation during the recycling process. This effect was more intense in the silanized nanotubes, because the carboxyl groups were effectively blocked by acid–base interactions with the amino groups of the chemical modification. The properties of the recycled plastic with only 2 wt% of silanized halloysite were very close to those of the virgin plastic.

36 MATERIALS SCIENCE↗
DOE OSTI2018

Defining the Specificity of Carbohydrate–Protein Interactions by Quantifying Functional Group Contributions

Protein–carbohydrate interactions are significant in a wide range of biological processes, disruption of which has been implicated in many different diseases. The capability of glycan-binding proteins (GBPs) to specifically bind to the corresponding glycans allows GBPs to be utilized in glycan biomarker detection or conversely to serve as targets for therapeutic intervention. However, understanding the structural origins of GBP specificity has proven to be challenging due to their typically low binding affinities (mM) and their potential to display broad or complex specificities. Here we perform molecular dynamics (MD) simulations and post-MD energy analyses with the Poisson–Boltzmann and generalized Born solvent models (MM-PB/GBSA) of the Erythrina cristagalli lectin (ECL) with its known ligands, and with new cocrystal structures reported herein. While each MM-PB/GBSA parametrization resulted in different estimates of the desolvation free energy, general trends emerged that permit us to define GBP binding preferences in terms of ligand substructure specificity. Additionally, we have further decomposed the theoretical interaction energies into contributions made between chemically relevant functional groups. Based on these contributions, the functional groups in each ligand can be assembled into a pharmacophore comprised of groups that are either critical for binding, or enhance binding, or are noninteracting. It is revealed that the pharmacophore for ECL consists of the galactopyranose (Gal) ring atoms along with C6 and the O3 and O4 hydroxyl groups. This approach provides a convenient method for identifying and quantifying the glycan pharmacophore and provides a novel method for interpreting glycan specificity that is independent of residue-level glycan nomenclature. As a result, a pharmacophore approach to defining specificity is readily transferable to molecular design software and, therefore, may be particularly useful in designing therapeutics (glycomimetics) that target GBPs.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2019

Integrating terrestrial and aquatic processes toward watershed scale modeling of dissolved organic carbon fluxes

Dissolved organic carbon (DOC) is not only a critical component of global and regional carbon budgets, but also an important precursor for carcinogenic disinfection byproducts (DBP) generated during drinking water disinfection process. The lack of process based watershed scale model for carbon cycling has been a limiting factor impeding effective watershed management to control DOC fluxes to source waters. Here, we integrated terrestrial and aquatic carbon processes into the widely tested Soil and Water Assessment Tool (SWAT) watershed model to enable watershed-scale DOC modeling (referred to as SWAT-DOC hereafter). The modifications to SWAT mainly fall into two groups: (1) DOC production in soils and its transport to aquatic environment by different hydrologic processes, and (2) riverine transformation of DOC and their interactions with particular organic carbon (POC), inorganic carbon and algae (floating and bottom). We tested the new SWAT-DOC model in the Cannonsville watershed, which is part of the New York City (NYC) water supply system, using long-term DOC load data (from 1998 to 2012) derived from 1399 DOC samplings. The calibration and verification results indicate that SWAT-DOC achieved satisfactory performance for both streamflow and DOC at daily and monthly temporal scales. The parameter sensitivity analysis indicates that DOC loads in the Cannonsville watershed are controlled by the DOC production in soils and its transport in both terrestrial and aquatic environments. Further model uncertainty analysis indicates high uncertainties associated with peak DOC loads, which are attributed to underestimation of high streamflows. Therefore, future efforts to enhance SWAT-DOC to better represent runoff generation processes hold promise to further improve DOC load simulation. Overall, the wide use of SWAT and the satisfactory performance of SWAT-DOC make it a useful tool for DOC modeling and mitigation at the watershed scale.

Dissolved Organic Carbon, non-point source polluti↗