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At least 1,369 records · Page 76
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

BEYONDPLANCK VIII. Efficient sidelobe convolution and corrections through spin harmonics

We introduce a new formulation of the Conviqt convolution algorithm in terms of spin harmonics, and apply this to the problem of sidelobe correction for BEYONDPLANCK, the first end-to-end Bayesian Gibbs sampling framework for CMB analysis. We compare our implementation to the previous Planck LevelS implementation, and find good agreement between the two codes in terms of accuracy, but with a speed-up reaching a factor of 3–10, depending on the frequency bandlimits, l max and m max . The new algorithm is significantly simpler to implement and maintain, since all low-level calculations are handled through an external spherical harmonic transform library. We find that our mean sidelobe estimates for Planck LFI are in good agreement with previous efforts. Additionally, we present novel sidelobe rms maps that quantify the uncertainty in the sidelobe corrections due to variations in the sky model.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Gene-by-environment interactions in plants: Molecular mechanisms, environmental drivers, and adaptive plasticity

Abstract Plants demonstrate a broad range of responses to environmental shifts. One of the most remarkable responses is plasticity, which is the ability of a single plant genotype to produce different phenotypes in response to environmental stimuli. As with all traits, the ability of plasticity to evolve depends on the presence of underlying genetic diversity within a population. A common approach for evaluating the role of genetic variation in driving differences in plasticity has been to study genotype-by-environment interactions (G × E). G × E occurs when genotypes produce different phenotypic trait values in response to different environments. In this review, we highlight progress and promising methods for identifying the key environmental and genetic drivers of G × E. Specifically, methodological advances in using algorithmic and multivariate approaches to understand key environmental drivers combined with new genomic innovations can greatly increase our understanding about molecular responses to environmental stimuli. These developing approaches can be applied to proliferating common garden networks that capture broad natural environmental gradients to unravel the underlying mechanisms of G × E. An increased understanding of G × E can be used to enhance the resilience and productivity of agronomic systems.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2024

Machine-Learning-Based Mapping and Modeling of Solar Energy with Ultra-High Spatiotemporal Granularity

Despite the rapid growth of solar energy, we still lack a dynamic, high-fidelity database that tracks the spatiotemporal variations of solar PVs and their associated infrastructures across different places at a spatially resolved scale. The absence of such data presents a barrier to various applications such as solar PV growth projection, solar energy integration, solar incentive design, and climate risk assessment. In this project, we aim to bridge this gap by developing AI-based algorithms to extract granular information about solar PV installations and their associated infrastructures (i.e., distribution grids) from widely available unstructured data like remote sensing images and street views. As a result, we have built the Solar Energy Atlas, a fine-grained, large-scale geospatial overlay of distributed solar PVs and distribution grids. On top of it, we have advanced the understanding of solar adoption and distribution grid vulnerability to climate-induced extremes. Our major contributions can be summarized as follow: (1) By developing new AI algorithms, we have built the most comprehensive solar PV spatiotemporal database covering the entire US. This is the first time we obtained the exact GPS locations, size, subtype, and installation year information for rooftop solar PVs across the US. This database can be used for solar PV growth projection, solar energy integration, solar energy policy analysis and design, and spatially-resolved climate risk assessment. (2) Leveraging this database, we have uncovered the socioeconomic driving factors that are correlated with earlier onset of solar adoption and higher saturated adoption levels. We have identified the heterogeneity in the effects of different types of financial incentives on solar adoption and provided implications for tailoring incentive design based on local income levels to promote equitable solar adoption. (3) We have developed a distribution grid GIS mapping algorithm which can obtain granular geospatial and topology information about distribution grids using multi-modal open data, reducing the dependency on hard-to-obtain smart meter data of conventional approaches. It shows effectiveness in both the U.S. and Sub-Saharan Africa. Using this algorithm, we have uncovered the non-uniform vulnerability of distribution grids to wildfires in California in the aspects of undergrounding protection and Distributed Energy Resources (DER) preparedness. This has provided important implications for improving the affordability and equity of grid adaptation approaches. (3) We have made our produced database publicly available and provided user-friendly interface to enable various stakeholders and the general public to interact with the data. We have also integrated the produced data into the Data Commons platform to enable the public to access the data and correlate it with other location-specific characteristics simply using natural language as queries. The impact of our project is three-fold: (1) New algorithms for mapping solar PVs and distribution grids across space and time, which are open source to facilitate researchers and industry; (2) New databases of solar PVs and distribution grids that have been made publicly available for engineering, social, and policy applications; (3) New understandings and actionable insights on the potential approaches to promoting solar adoption and reducing energy infrastructure vulnerabilities. In this report, we start by discussing the project background and motivation (section 5), followed by the overview of project objectives (section 6). Results and discussion for each task are presented in section 7. Significant accomplishments are summarized in section 8. This report will be concluded by discussing the paths forwards (section 9), products (section 10), and team roles (section 11).

14 SOLAR ENERGY↗
DOE OSTI2021

Machine Learning-Based Classification of Lignocellulosic Biomass from Pyrolysis-Molecular Beam Mass Spectrometry Data

High-throughput analysis of biomass is necessary to ensure consistent and uniform feedstocks for agricultural and bioenergy applications and is needed to inform genomics and systems biology models. Pyrolysis followed by mass spectrometry such as molecular beam mass spectrometry (py-MBMS) analyses are becoming increasingly popular for the rapid analysis of biomass cell wall composition and typically require the use of different data analysis tools depending on the need and application. Here, the authors report the py-MBMS analysis of several types of lignocellulosic biomass to gain an understanding of spectral patterns and variation with associated biomass composition and use machine learning approaches to classify, differentiate, and predict biomass types on the basis of py-MBMS spectra. Py-MBMS spectra were also corrected for instrumental variance using generalized linear modeling (GLM) based on the use of select ions relative abundances as spike-in controls. Machine learning classification algorithms e.g., random forest, k-nearest neighbor, decision tree, Gaussian Naïve Bayes, gradient boosting, and multilayer perceptron classifiers were used. The k-nearest neighbors (k-NN) classifier generally performed the best for classifications using raw spectral data, and the decision tree classifier performed the worst. After normalization of spectra to account for instrumental variance, all the classifiers had comparable and generally acceptable performance for predicting the biomass types, although the k-NN and decision tree classifiers were not as accurate for prediction of specific sample types. Gaussian Naïve Bayes (GNB) and extreme gradient boosting (XGB) classifiers performed better than the k-NN and the decision tree classifiers for the prediction of biomass mixtures. The data analysis workflow reported here could be applied and extended for comparison of biomass samples of varying types, species, phenotypes, and/or genotypes or subjected to different treatments, environments, etc. to further elucidate the sources of spectral variance, patterns, and to infer compositional information based on spectral analysis, particularly for analysis of data without a priori knowledge of the feedstock composition or identity.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1981

Off-nadir antenna bias correction using Amazon rain forest sigma deg data

The radar response from the Amazon rain forest was studied to determine the suitability of this region for use as a standard target to calibrate a scatterometer like that proposed for the National Ocean Satellite System (NOSS). Backscattering observations made by the SEASAT-1 scatterometer system show the Amazon rain forest to be a homogeneous, azimuthally-isotropic, radar target which is insensitive to polarization. The variation with angle of incidence may be adequately modeled as sigma deg (dB) = alpha theta + beta with typical values for the incidence-angle coefficient from 0.07 dB deg to 0.15 dB/deg. A small diurnal effect occurs, with measurements at sunrise being 0.5 dB to 1 dB higher than the rest of the day. Maximum likelihood estimation algorithms are presented which permit determination of relative bias and true pointing angle for each beam. Specific implementation of these algorithms for the proposed NOSS scatterometer system is also discussed.

Birrer, I. J.↗
NASA NTRS1984

Microprocessor implementation of an FFT for ionospheric VLF observations

A fast Fourier transform algorithm is implemented on a CMOS microprocessor for application to very low-frequency electric fields (less than 10 kHz) sensed on high-altitude scientific balloons. Two FFT's are calculated simultaneously by associating them with conjugate symmetric and conjugate antisymmetric results. One goal of the system was to detect spectral signatures associated with fast time variations present in natural signals such as whistlers and chorus. Although a full evaluation of the system was not possible for operational reasons, a measure of the system's success has been defined and evaluated.

Elvidge, J.↗
NASA NTRS1991

Avoiding space robot collisions utilizing the NASA/GSFC tri-mode skin sensor

Sensor based robot motion planning research has primarily focused on mobile robots. Consider, however, the case of a robot manipulator expected to operate autonomously in a dynamic environment where unexpected collisions can occur with many parts of the robot. Only a sensor based system capable of generating collision free paths would be acceptable in such situations. Recently, work in this area has been reported in which a deterministic solution for 2DOF systems has been generated. The arm was sensitized with 'skin' of infra-red sensors. We have proposed a heuristic (potential field based) methodology for redundant robots with large DOF's. The key concepts are solving the path planning problem by cooperating global and local planning modules, the use of complete information from the sensors and partial (but appropriate) information from a world model, representation of objects with hyper-ellipsoids in the world model, and the use of variational planning. We intend to sensitize the robot arm with a 'skin' of capacitive proximity sensors. These sensors were developed at NASA, and are exceptionally suited for the space application. In the first part of the report, we discuss the development and modeling of the capacitive proximity sensor. In the second part we discuss the motion planning algorithm.

Prinz, F. B.↗
NASA NTRS1992

Selection of LCTV operating curves for input and filter

A liquid crystal television (LCTV) SLM's phase, amplitude, and polarization all influence our selection of operating curves for input and filter. With its continuum of drive voltage, the LCTV permits grey-level control in both locations. Selection of an optimum curve depends on expected variations in signal amplitude, presence of input scene structured noise, and other factors. Using modulators obtained from a commercially available projection LCTV, and with no specifically added input noise present, we have obtained laboratory results in which the ratio of peak intensity to correlator system noise exceeded 100:1. Unfortunately, it was massively inefficient to implement the algorithm which had been developed as the abstract for this paper was submitted. Fortunately, we have quite recently developed two insights that will speed it by several orders of magnitude, and we shall report that result in the future. We will also extend the work to include clutter objects and additive input scene noise.

Juday, Richard D.↗
NASA NTRS1994

Conflict-free trajectory planning for air traffic control automation

As the traffic demand continues to grow within the National Airspace System (NAS), the need for long-range planning (30 minutes plus) of arrival traffic increases greatly. Research into air traffic control (ATC) automation at ARC has led to the development of the Center-TRACON Automation System (CTAS). CTAS determines optimum landing schedules for arrival traffic and assists controllers in meeting those schedules safely and efficiently. One crucial element in the development of CTAS is the capability to perform long-range (20 minutes) and short-range (5 minutes) conflict prediction and resolution once landing schedules are determined. The determination of conflict-free trajectories within the Center airspace is particularly difficult because of large variations in speed and altitude. The paper describes the current design and implementation of the conflict prediction and resolution tools used to generate CTAS advisories in Center airspace. Conflict criteria (separation requirements) are defined and the process of separation prediction is described. The major portion of the paper will describe the current implementation of CTAS conflict resolution algorithms in terms of the degrees of freedom for resolutions as well as resolution search techniques. The tools described in this paper have been implemented in a research system designed to rapidly develop and evaluate prototype concepts and will form the basis for an operational ATC automation system.

Slattery, Rhonda↗
NASA NTRS2015

Global Ocean Evaporation: How Well Can We Estimate Interannual to Decadal Variability?

Evaporation from the world's oceans constitutes the largest component of the global water balance. It is important not only as the ultimate source of moisture that is tied to the radiative processes determining Earth's energy balance but also to freshwater availability over land, governing habitability of the planet. Here we focus on variability of ocean evaporation on scales from interannual to decadal by appealing to three sources of data: the new MERRA-2 (Modern-Era Retrospective analysis for Research and Applications -2); climate models run with historical sea-surface temperatures, ice and atmospheric constituents (so-called AMIP experiments); and state-of-the-art satellite retrievals from the Seaflux and HOAPS (Hamburg Ocean-Atmosphere Parameters and Fluxes from Satellite) projects. Each of these sources has distinct advantages as well as drawbacks. MERRA-2, like other reanalyses, synthesizes evaporation estimates consistent with observationally constrained physical and dynamical models-but data stream discontinuities are a major problem for interpreting multi-decadal records. The climate models used in data assimilation can also be run with lesser constraints such as with SSTs and sea-ice (i.e. AMIPs) or with additional, minimal observations of surface pressure and marine observations that have longer and less fragmentary observational records. We use the new ERA-20C reanalysis produced by ECMWF embodying the latter methodology. Still, the model physics biases in climate models and the lack of a predicted surface energy balance are of concern. Satellite retrievals and comparisons to ship-based measurements offer the most observationally-based estimates, but sensor inter-calibration, algorithm retrieval assumptions, and short records are dominant issues. Our strategy depends on maximizing the advantages of these combined records. The primary diagnostic tool used here is an analysis of bulk aerodynamic computations produced by these sources and uses a first-order Taylor series analysis of wind speed, SST, near-surface stability and relative humidity variations around climatology to gauge the importance of these components. We find that the MERRA-2 evaporation record is strongly influenced by the availability of wind speed and humidity from passive microwave imagers beginning in the late 1980s as well as by the SST record. The trend over the period 1980 to present is nearly 10%. AMIP or the ERA-20C trends are much smaller. We find that ENSO-related signals involving both wind speed and thermodynamic variability remain the primary signal in the latter and are confirmed by satellite retrievals. We present uncertainty estimates based on the various data sources and discuss the implications for GEWEX water and energy budget science challenges.

Robertson, Franklin R.↗
DOE OSTI2023

malbacR: A Package for Standardized Implementation of Batch Correction Methods for Omics Data

Mass spectrometry is a powerful tool for identifying and analyzing small molecules, such as metabolites and lipids, in com-plex biological samples. Liquid chromatography and gas chromatography mass spectrometry studies quite commonly in-volve large numbers of samples, which can require significant time for sample preparation and analyses. To accommodate such studies, the samples are commonly split into batches. Inevitably, variations in sample handling, temperature fluctua-tion, imprecise timing, column degradation and other factors result in systematic errors or biases of the measured abundances between the batches. Numerous methods are available via R packages to assist with batch correction for small molecule om-ics data; however, since these methods were developed by different research teams, the algorithms are available in separate R packages, each with different data input and output formats. We introduce the malbacR package which consolidates eleven common batch effect correction methods for small molecule omics data into one place so users can easily implement and compare: pareto scaling, power scaling, range scaling, ComBat, EigenMS, NOMIS, RUV-random, QC-RLSC, WaveI-CA2.0, TIGER, and SERRF. The malbacR package standardizes data input and output formats across these batch correction methods. The package works in conjunction with the pmartR package, allowing users to seamlessly include batch effect cor-rection in a pmartR workflow without needing any additional data manipulation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
NASA NTRS1985

A new class of high accuracy TVD schemes for hyperbolic conservation laws

A new family of high accuracy Total Variation Diminishing (TVD) schemes has been developed. Members of the family include the conventional second-order TVD upwind scheme, various other second-order accurate TVD schemes with lower truncation error, and even a third-order accurate TVD approximation. All the schemes are defined with a five-point grid bandwidth. In this paper, the new algorithms are described for scalar equations, systems, and arbitrary coordinates. Selected numerical results are provided to illustrate the new algorithms and their properties.

Chakravarthy, S. R.↗
DOE OSTI2020

A Genome-Based Model to Predict the Virulence of Pseudomonas aeruginosa Isolates

ABSTRACT: Variation in the genome of Pseudomonas aeruginosa , an important pathogen, can have dramatic impacts on the bacterium’s ability to cause disease. We therefore asked whether it was possible to predict the virulence of P. aeruginosa isolates based on their genomic content. We applied a machine learning approach to a genetically and phenotypically diverse collection of 115 clinical P. aeruginosa isolates using genomic information and corresponding virulence phenotypes in a mouse model of bacteremia. We defined the accessory genome of these isolates through the presence or absence of accessory genomic elements (AGEs), sequences present in some strains but not others. Machine learning models trained using AGEs were predictive of virulence, with a mean nested cross-validation accuracy of 75% using the random forest algorithm. However, individual AGEs did not have a large influence on the algorithm’s performance, suggesting instead that virulence predictions are derived from a diffuse genomic signature. These results were validated with an independent test set of 25 P. aeruginosa isolates whose virulence was predicted with 72% accuracy. Machine learning models trained using core genome single-nucleotide variants and whole-genome k-mers also predicted virulence. Our findings are a proof of concept for the use of bacterial genomes to predict pathogenicity in P. aeruginosa and highlight the potential of this approach for predicting patient outcomes. IMPORTANCE Pseudomonas aeruginosa is a clinically important Gram-negative opportunistic pathogen. P. aeruginosa shows a large degree of genomic heterogeneity both through variation in sequences found throughout the species (core genome) and through the presence or absence of sequences in different isolates (accessory genome). P. aeruginosa isolates also differ markedly in their ability to cause disease. In this study, we used machine learning to predict the virulence level of P. aeruginosa isolates in a mouse bacteremia model based on genomic content. We show that both the accessory and core genomes are predictive of virulence. This study provides a machine learning framework to investigate relationships between bacterial genomes and complex phenotypes such as virulence.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Interconnection of Three Single-Phase Feeders in North America Distribution Systems

This paper proposes a solution for maintaining power balance within all three phases at residential level during islanded mode of operation. Grid abnormalities can lead to isolating the residential microgrid from the main grid, and as a result, distributed generation (DG) units take the full responsibility of supplying local loads. However, in such condition, some phases might face the challenge of meeting local load demand due to the lack of enough power generation, resulting in voltage drop and frequency variation across household loads. In order to resolve this issue, the proposed method in this paper seamlessly interconnects all three single-phase feeders during islanded mode and forms a unified single-phase residential microgrid. Consequently, the load demands in all three phases are met, leading to enhanced voltage and frequency profiles. For this purpose, a seamless transition algorithm is defined which monitors the system condition in real time, and coordinates the operation of all inverter-based DG units in residential microgrid accordingly during transitions. Case study results are provided to verify the validity of proposed method.

Pilehvar, Mohsen S.↗
DOE OSTI2023

A mechanistic model for creep and thermal aging in Alloy 709

This report describes a physics-based model for creep and thermal aging in Alloy 709. Alloy 709 is an advanced austenitic alloy, targeted for use in future Sodium Fast Reactors (SFRs) and other advanced reactors. The material has superior high temperature properties compared to currently qualified 316 and 304 stainless steels. However, the available creep and thermal aging test database for Alloy 709 is significantly more limited compared to the historical materials. The physics-based model developed here is one way to accelerate the qualification of the material by providing more accurate long-term predictions for creep properties and thermal aging, compared to current empirical time-extrapolate techniques. The crystal plasticity finite element model is used to predict the deformation and failure of alloy 709. The same setup for the CPFE model is used in both the baseline model calibration process and the simulation campaigns for parameter inference. Specific constitutive choices are made for Alloy 709 to capture the primary deformation mechanisms. The dislocation creep formulation developed by Hu and Cocks is extended to account for coupled precipitation formation and the grain boundary cavitation model developed by Sham, Needleman, et al. is used to model grain boundary cavitation-induced failure. A novel update algorithm is proposed to render the semi-discrete constitutive update for the Sham-Needleman model unconditionally stable. A progressive calibration approach is adopted based on the observations that several types of material responses can be effectively decoupled. A surrogate model is trained based on full-fledged CPFE simulations to accelerate the forward model evaluations, and stochastic variational inference (SVI) is used to calibrate the unknown microstructural model parameters. The calibrated mechanistic model is used to predict the long-term creep life of Alloy 709, and the predictions are compared against classical empirical approaches.

36 MATERIALS SCIENCE↗
NASA NTRS1978

An adaptive learning control system for aircraft

A learning control system and its utilization as a flight control system for F-8 Digital Fly-By-Wire (DFBW) research aircraft is studied. The system has the ability to adjust a gain schedule to account for changing plant characteristics and to improve its performance and the plant's performance in the course of its own operation. Three subsystems are detailed: (1) the information acquisition subsystem which identifies the plant's parameters at a given operating condition; (2) the learning algorithm subsystem which relates the identified parameters to predetermined analytical expressions describing the behavior of the parameters over a range of operating conditions; and (3) the memory and control process subsystem which consists of the collection of updated coefficients (memory) and the derived control laws. Simulation experiments indicate that the learning control system is effective in compensating for parameter variations caused by changes in flight conditions.

Mekel, R.↗
NASA NTRS1986

Inverse kinematic solution for near-simple robots and its application to robot calibration

This paper provides an inverse kinematic solution for a class of robot manipulators called near-simple manipulators. The kinematics of these manipulators differ from those of simple-robots by small parameter variations. Although most robots are by design simple, in practice, due to manufacturing tolerances, every robot is near-simple. The method in this paper gives an approximate inverse kinematics solution for real time applications based on the nominal solution for these robots. The validity of the results are tested both by a simulation study and by applying the algorithm to a PUMA robot.

Hayati, Samad A.↗
NASA NTRS1993

Investigation of three-dimensional separation at wing/body junctions in supersonic flows using TVD MacCormack's scheme

A Total Variation Diminishing (TVD) MacCormack scheme is used to study the three-dimensional separation at wing/body junctions in supersonic flows. The new scheme is robust, resolves discontinuities well with-out any numerical oscillations present in the flow field. Moreover, this new scheme does not contain any problem dependent parameters to be adjusted and many production codes employing MacCormack algorithm can be easily updated to good effect. Numerical simulation carried out in laminar supersonic junction flows using the new scheme yields improved prediction for the separation location and the axial velocity profiles in the separated flow region.

Lakshmanan, B.↗