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At least 1,369 records · Page 76

Simons Observatory Microwave SQUID Multiplexing Readout: Cryogenic RF Amplifier and Coaxial Chain Design

The Simons Observatory (SO) is an upcoming polarization-sensitive cosmic microwave background experiment on the Cerro Toco Plateau (Chile) with large overlap with other optical and infrared surveys (e.g., DESI, LSST, HSC). To enable the readout of O(10,000) detectors in each of the four telescopes of SO, we will employ the microwave SQUID multiplexing technology. With a targeted multiplexing factor of O(1000), microwave SQUID multiplexing has never been deployed on the scale needed for SO. Here we present the design of the cryogenic coaxial cable and RF component chain that connects room temperature readout electronics to superconducting resonators that are coupled to transition edge sensor bolometers operating at sub-Kelvin temperatures. We describe design considerations including cryogenic RF component selection, system linearity, noise, and thermal power dissipation.

47 OTHER INSTRUMENTATION↗

The Ground-State Vector of the XY Heisenberg Chain and the Gauss Decomposition

We consider the XY Heisenberg spin (1/2) chain in the fermion representation. The construction of the ground-state vector is based on the group-theoretical approach. An exact expression for the ground-state vector will allow one to study the combinatorics of the correlation functions of the model.

97 MATHEMATICS AND COMPUTING↗

Tetranuclear heteroleptic mercury(II) complexes of the composition [Hg{sub 4}(S{sub 2}CNPr{sub 2}){sub 6}(NO{sub 3}){sub 2}] and [Hg{sub 4}(S{sub 2}CNPr{sub 2}){sub 4}Cl{sub 4}]: structural organization, principles of construction of supramolecular polymeric chains, and thermal behavior

New heteroleptic mercury(II) complexes [Hg{sub 4}(S{sub 2}CNPr{sub 2}){sub 6}(NO{sub 3}){sub 2}] (1) and [Hg{sub 4}(S{sub 2}CNPr{sub 2}){sub 4}Cl{sub 4}] (2) were synthesized and characterized by single-crystal X-ray dif raction and {sup 13}C and {sup 15}N MAS NMR spectroscopy. In these complexes, the metal atoms are linked in pairs by bridging dipropyldithiocarbamate ligands (Pr{sub 2}Dtc) to form tetranuclear cations and molecules. The further structural organization of compound 1 to the polymeric chains [Hg{sub 4}(S{sub 2}CNPr{sub 2}){sub 6}(NO{sub 3}){sub 2}]{sub n} occurs due to the linking of [Hg{sub 4}(S{sub 2}CNPr{sub 2}){sub 6}]{sup 2+} cations by pairs of bridging nitrate groups. The formation of the supramolecular polymeric structure of 2 is determined by pairwise secondary Hg⋯Cl bonds between the cyclic [Hg{sub 4}(S{sub 2}CNPr{sub 2}){sub 4}Cl{sub 4}] molecules, in which the central eight-membered metallocycle [Hg{sub 4}S{sub 4}] adopts a distorted chair conformation. The thermal behavior of compounds 1 and 2 was studied by simultaneous thermal analysis.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Targeted metabolomic analysis identifies increased serum levels of GABA and branched chain amino acids in canine diabetes

Introduction Dogs with naturally occurring diabetes mellitus represent a potential model for human type 1 diabetes, yet signifcant knowledge voids exist in terms of the pathogenic mechanisms underlying the canine disorder. Untargeted metabolomic studies from a limited number of diabetic dogs identifed similarities to humans with the disease. Objective To expand and validate earlier metabolomic studies, identify metabolites that difer consistently between diabetic and healthy dogs, and address whether certain metabolites might serve as disease biomarkers. Methods Untargeted metabolomic analysis via liquid chromatography-mass spectrometry was performed on serum from diabetic (n=15) and control (n=15) dogs. Results were combined with those of our previously published studies using identical methods (12 diabetic and 12 control dogs) to identify metabolites consistently diferent between the groups in all 54 dogs. Thirty-two candidate biomarkers were quantifed using targeted metabolomics. Biomarker concentrations were compared between the groups using multiple linear regression (corrected P<0.0051 considered signifcant). Results Untargeted metabolomics identifed multiple persistent diferences in serum metabolites in diabetic dogs compared with previous studies. Therefore, targeted metabolomics showed increases in gamma amino butyric acid, valine, leucine, isoleucine, citramalate, and 2-hydroxyisobutyric acid in diabetic versus control dogs while indoxyl sulfate, N-acetyl-L-aspartic acid, kynurenine, anthranilic acid, tyrosine, glutamine, and tauroursodeoxycholic acid were decreased. Conclusion Several of these fndings parallel metabolomic studies in both human diabetes and other animal models of this disease. Given recent studies on the role of GABA and branched chain amino acids in human diabetes, the increase in serum concentrations in canine diabetes warrants further study of these metabolites as potential biomarkers, and to identify similarity in mechanisms underlying this disease in humans and dogs.

59 BASIC BIOLOGICAL SCIENCES↗

The Effect of the Prior and the Experimental Design on the Inference of the Precision Matrix in Gaussian Chain Graph Models

Here, we investigate whether (and how) experimental design could aid in the estimation of the precision matrix in a Gaussian chain graph model, especially the interplay between the design, the effect of the experiment and prior knowledge about the effect. Estimation of the precision matrix is a fundamental task to infer biological graphical structures like microbial networks. We compare the marginal posterior precision of the precision matrix under four priors: flat, conjugate Normal-Wishart, Normal-MGIG and a general independent. Under the flat and conjugate priors, the Laplace-approximated posterior precision is not a function of the design matrix rendering useless any efforts to find an optimal experimental design to infer the precision matrix. In contrast, the Normal-MGIG and general independent priors do allow for the search of optimal experimental designs, yet there is a sharp upper bound on the information that can be extracted from a given experiment. We confirm our theoretical findings via a simulation study comparing (i) the KL divergence between prior and posterior and (ii) the Stein’s loss difference of MAPs between random and no experiment. Our findings provide practical advice for domain scientists conducting experiments to better infer the precision matrix as a representation of a biological network.

54 ENVIRONMENTAL SCIENCES↗

Constructing the Pareto front for multi-objective Markov chains handling a strong Pareto policy approach

In this paper, we present a multi-objective solution of the Pareto front for a certain class of discrete-time ergodic controllable Markov chains. For solving the problem, we transform the original multi-objective problem into an equivalent nonlinear programming problem implementing the Lagrange principle. We then propose to adopt the Tikhonov’s regularization method to ensure the convergence of the cost functions to a unique point into the Pareto front. We show that Pareto policies are characterized as optimal policies. One of the fundamental problems related to the construction of the Pareto front is the existence and characterization of both, Pareto and strong Pareto policies. By introducing the Tikhonov’s regularizator, we ensure the existence of strong Pareto policies. This paper proposes a real solution to this problem. We formulate the original problem considering several constraints: (a) we employ the c-variable method for the introduction of linear constraints over the nonlinear problem and (b) restrict the cost functions, allowing points in the Pareto front to have a small distance from one another. The constraints imposed by the c-variable method make the problem computationally tractable and the restriction imposed by the small distance change ensures the continuation of the Pareto front. The resulting equation in this nonlinear system is an optimization problem for which the necessary and efficient condition of a minimum is solved using the projected gradient method. Moreover, we also prove the convergence conditions and compute the estimate rate of convergence of variables corresponding to the Lagrange principle and the Tikhonov’s regularization, respectively. We provide all the details needed to implement the proposed method in an efficient way. The usefulness of the method is successfully demonstrated by a numerical example.

97 MATHEMATICS AND COMPUTING↗

Evolutionary computation algorithms to coordinating order acceptance and batch delivery for an integrated supply chain scheduling

This paper proposes a novel approach of coordinating decisions in an integrated supply chain (ISC): coordinating order acceptance (OA) and batch delivery (BD) due to round trip transportation (RTT) and using third-party logistics (3PL) vehicles. The paper aims at trading off among accepted orders revenue, delivery costs as well as any penalties incurred in the ISC to maximize the total benefit. A novel mixed-integer programming is proposed for the problem. In addition, the paper provides a heuristic to form batches and develops a hybrid evolutionary computation algorithms based on particle swarm optimization (PSO) and genetic algorithm (GA) to solve the problem. An information sharing mechanism is improved and applied. To explore and to locate the proposed PSO in a better neighborhood, a local search is proposed. Taguchi experimental design is utilized to set the appropriate values of the algorithms’ parameters and random instances are generated to evaluate the performance of the algorithms. The paper investigates the profitability sensitivity of the problem to parameters and analyzes the effect of the changes in the parameters on the performance of our proposed algorithms. The attained results show the appropriate performance of our algorithms.

97 MATHEMATICS AND COMPUTING↗

Effect of Crystallinity on Polymer Chain Compression in Polyethylene Dynamically Loaded with In-Situ X-Ray Diffraction

Abstract Polyethylene (PE) is a polymer widely used in commercial applications, where the properties of PE can be altered based on the molecular conformation. In this study, shock compression experiments with in-situ x-ray diffraction were conducted on two conformations of PE– low density polyethylene (LDPE) and ultra-high molecular weight polyethylene (UHMWPE). Encouragingly, X-ray diffraction patterns were easily observed in LDPE, which is only 25% crystalline. In agreement with a previous study on HDPE, LDPE exhibited a phase transition at 7.7 GPa. Lower pressure experiments on UHMWPE and LDPE exhibited polymer chain compression, but no occurrence of a phase transition.

36 MATERIALS SCIENCE↗

Submonomer synthesis of sequence defined peptoids with diverse side-chains.

Peptoids are a diverse family of sequence-defined oligomers of N-substituted glycine monomers, that can be readily accessed by the solid-phase submonomer synthesis method. Due to the versatility and efficiency of this chemistry, and the easy access to hundreds of potential monomers, there is an enormous potential sequence space that can be explored. This has enabled researchers from many different fields to custom-design peptoid sequences tailored to a wide variety of problems in biomedicine, nanoscience and polymer science. Here we provide detailed protocols for the synthesis of peptoids, using optimized protocols that can be performed by non-chemists. The submonomer method is fully compatible with Fmoc-peptide synthesis conditions, so the method is readily automated on existing automated peptide synthesizers using protocols provided here. Although the submonomer synthesis for peptoids is well established, there are special considerations required in order to access many of the most useful and desirable sidechains. Here we provide methods to include most of the amino-acid-like side chains, some of the most important non-natural monomer classes, as well as the creation of peptoid conjugates and peptide-peptoid hybrids.

Connolly, Michael D↗

Measurement-induced disturbance and thermal negativity in 1D optical lattice chain

We study the measurement-induced disturbance (MID) in a 1D optical lattice chain with nonlinear coupling. Special attention is paid to the difference between the thermal entanglement and MID when considering the influences of the linear coupling constant, nonlinear coupling constant and external magnetic field. It is shown that MID is more robust than thermal entanglement against temperature T and external magnetic field B, and MID may reveal more properties about quantum correlations of the system, which can be seen from the point of view that MID can be nonzero when there is no thermal entanglement and MID can detect the critical point of quantum phase transition at finite temperature. - Highlights: Black-Right-Pointing-Pointer The nonlinear coupling constant can strengthen the quantum correlation. Black-Right-Pointing-Pointer MID is more robust than entanglement against temperature and magnetic field. Black-Right-Pointing-Pointer MID exhibits more information about quantum correlation than entanglement. Black-Right-Pointing-Pointer MID can detect the critical point of quantum phase transition at finite temperature.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

The Haldane–Shastry spin chain and the topological basis realization

In this paper, based on the topological basis states, we investigate the Hamiltonian family (H{sub 2},H{sub 3},H{sub 4}) of a closed four-qubit Haldane–Shastry spin chain. Not only the two-qubit interaction form, but also the three-qubit interaction form and the four-qubit interaction form are presented in terms of spin operators. Meanwhile, we explore some particular properties of the topological basis states in these systems. With Yangian algebra, the symmetry of the systems and the transitions between the eigenstates have been investigated. We find a really useful effect of Y(sl(2)) operators (J{sub ±},J{sub 3}), which is that they can describe the transitions between the spin single state and the spin triple states. Furthermore, we construct a new Hamiltonian, whose energy degeneracies can be changed by adjusting the strengths of the two-qubit interactions, three-qubit interactions, four-qubit interactions, and the external magnetic field. -- Highlights: •We study the Haldane–Shastry model based on the topological basis realization. •Really useful effects of Yangian operators are found. •We explore some particular properties of the topological basis in these systems. •We construct a new Hamiltonian whose energy degeneracy can be changed.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Semiclassical prediction of large spectral fluctuations in interacting kicked spin chains

While plenty of results have been obtained for single-particle quantum systems with chaotic dynamics through a semiclassical theory, much less is known about quantum chaos in the many-body setting. We contribute to recent efforts to make a semiclassical analysis of many-body systems feasible. This is nontrivial due to both the enormous density of states and the exponential proliferation of periodic orbits with the number of particles. As a model system we study kicked interacting spin chains employing semiclassical methods supplemented by a newly developed duality approach. We show that for this model the line between integrability and chaos becomes blurred. Due to the interaction structure the system features (non-isolated) manifolds of periodic orbits possessing highly correlated, collective dynamics. As with the invariant tori in integrable systems, their presence lead to significantly enhanced spectral fluctuations, which by order of magnitude lie in-between integrable and chaotic cases.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Thermal quantum coherence and correlation in the extended XY spin chain

Quantum coherence and correlation of thermal states in the extended XY spin chain are studied in terms of the recently proposed l{sub 1} norm, skew information, and Bures distance of geometry discord (BGD), respectively. The entanglement measured via concurrence is calculated for reference. A two-dimensional susceptibility is introduced to explore their capability in highlighting the critical lines associated with quantum phase transitions in the model. It is shown that the susceptibility of the skew information and BGD is a genuine indicator of quantum phase transitions, and characterizes the factorization. However, the l{sub 1} norm is trivial for the factorization. An explicit scaling law of BGD is captured at low temperature in the XY model. In contrast to the entanglement, quantum coherence reveals a kind of long-range nonclassical correlation. Moreover, the obvious relation among model parameters is extracted for the factorized line in the extended model. Those are instructive for the understanding of quantum coherence and correlation in the theory of quantum information, and quantum phase transitions and factorization in condensed-matter physics.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Correlation functions for a spin-(1/2) Ising-XYZ diamond chain: Further evidence for quasi-phases and pseudo-transitions

One-dimensional systems with short-range interactions cannot exhibit a long-range order at nonzero temperature. However, there are some particular one-dimensional models, such as the Ising–Heisenberg spin models with a variety of lattice geometries, which exhibit unexpected behavior similar to the discontinuous or continuous temperature-driven phase transition. Although these pseudo-transitions are not true temperature-driven transitions showing only abrupt changes or sharp peaks in thermodynamic quantities, they may be confused while interpreting experimental data. Here we consider the spin-(1/2) Ising-XYZ diamond chain in the regime when the model exhibits temperature-driven pseudo-transitions. We provide a detailed investigation of several correlation functions between distant spins that illustrates the properties of quasi-phases separated by pseudo-transitions. Inevitably, all correlation functions show the evidence of pseudo-transition, which are supported by the analytical solutions and, besides we provide a rigorous analytical investigation around the pseudo-critical temperature. It is worth to mention that the correlation functions between distant spins have an extremely large correlation length at pseudo-critical temperature.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Diagonal entropy and topological phase transitions in extended Kitaev chains

We investigate the diagonal entropy for ground states of the extended Kitaev chains with extensive pairing and hopping terms. The systems contain rich topological phases equivalently represented by topological invariant winding numbers and Majorana zero modes. Both the finite size scaling law and block scaling law of the diagonal entropy are studied, which indicates that the diagonal entropy demonstrates volume effect. The parameter of volume term is regarded as the diagonal entropy density, which can identify the critical points of symmetry-protected topological phase transitions efficiently in the studied models, even for those with higher winding numbers. The formulation of block scaling law and the capability of diagonal entropy density in detecting topological phase transitions are independent of the chosen bases. In order to manifest the advantage of diagonal entropy, we also calculate the global entanglement, which cannot show clear signatures of the topological phase transitions. This work provides a new quantum-informatic approach to characterize the feature of the topologically ordered states and may motivate a deep understanding of the quantum coherence and diagonal entropy in various condensed matter systems.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Exact bounds for dynamical critical exponents of transverse-field Ising chains with a correlated disorder

Highlights: • Analytic results in disordered quantum systems are obtained. • Correlated disorder changes the universality class of quantum phase transitions. • The lower and upper bounds of the dynamical critical exponent are obtained. This study investigates the dynamical critical exponent of disordered Ising chains under transverse fields to examine the effect of a correlated disorder on quantum phase transitions. The correlated disorder, where the on-site transverse field depends on the nearest-neighbor coupling strengths connecting the site, gives a qualitatively different result from the uncorrelated disorder. In the uncorrelated disorder cases where the transverse field is either homogeneous over sites or random independently of the nearest-neighbor coupling strengths, the dynamical critical exponent is infinite. In contrast, in the presence of the correlated disorder, we analytically show that the dynamical critical exponent is finite. We also show that the dynamical critical exponent depends on the tuning process of the transverse field strengths.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Analysis of various types of single-polypeptide-chain (sc) heterodimeric A{sub 2A}R/D{sub 2}R complexes and their allosteric receptor–receptor interactions

Highlights: • Various scA{sub 2A}R/D{sub 2}R constructs, with spacers between the two receptors, were created. • Using whole cell binding assay, constructs were examined for their binding activity. • Although the apparent ratio of A{sub 2A}R to D{sub 2}R binding sites should be 1, neither was 1. • Counter agonist-independent binding cooperativity occurred in context of scA{sub 2A}R/D{sub 2}R. - Abstract: Adenosine A{sub 2A} receptor (A{sub 2A}R) heteromerizes with dopamine D{sub 2} receptor (D{sub 2}R). However, these class A G protein-coupled receptor (GPCR) dimers are not fully formed, but depend on the equilibrium between monomer and dimer. In order to stimulate the heteromerization, we have previously shown a successful design for a fusion receptor, single-polypeptide-chain (sc) heterodimeric A{sub 2A}R/D{sub 2}R complex. Here, using whole cell binding assay, six more different scA{sub 2A}R/D{sub 2}R constructs were examined. Not only in scA{sub 2A}R/D{sub 2}R ‘liberated’ with longer spacers between the two receptors, which confer the same configuration as the prototype, the A{sub 2A}R-odr4TM-D{sub 2L}R, but differ in size (Forms 1–3), but also in scA{sub 2A}R/D{sub 2L}R (Form 6) fused with a transmembrane (TM) of another type II TM protein, instead of odr4TM, neither of their fixed stoichiometry (the apparent ratios of A{sub 2A}R to D{sub 2}R binding sites) was 1, suggesting their compact folding. This suggests that type II TM, either odr4 or another, facilitates the equilibrial process of the dimer formation between A{sub 2A}R and D{sub 2L}R, resulting in the higher-order oligomer formation from monomer of scA{sub 2A}R/D{sub 2L}R itself. Also, in the reverse type scA{sub 2A}R/D{sub 2L}R, i.e., the D{sub 2L}R-odr4TM-A{sub 2A}R, counter agonist-independent binding cooperativity (cooperative folding) was found to occur (Forms 4 and 5). In this way, the scA{sub 2A}R/D{sub 2L}R system has unveiled the cellular phenomenon as a snapshot of the molecular behavior in A{sub 2A}R/D{sub 2L}R dimer. Thus, these results indicate that the various designed types of functional A{sub 2A}R/D{sub 2}R exist even in living cells and that this fusion expression system would be useful to analyze as a model of the interaction between class A GPCRs.

60 APPLIED LIFE SCIENCES↗