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At least 1,351 records · Page 75

Human Factors in Streaming Data Analysis: Challenges and Opportunities for Information Visualization: Human Factors in Streaming Data Analysis

State-of-the-art visual analytics models and frameworks mostly assume a static snapshot of the data, while in many cases it is a stream with constant updates and changes. Exploration of streaming data poses unique challenges as machine-level computations and abstractions need to be synchronized with the visual representation of the data and the temporally evolving human insights. In the visual analytics literature, we lack a thorough characterization of streaming data and analysis of the challenges associated with task abstraction, visualization design, and adaptation of the role of human-in-the-loop for exploration of data streams. We aim to fill this gap by conducting a survey of the state-of-the-art in visual analytics of streaming data for systematically describing the contributions and shortcomings of current techniques and analyzing the research gaps that need to be addressed in the future. Our contributions are: i) problem characterization for identifying challenges that are unique to streaming data analysis tasks, ii) a survey and analysis of the state-of-the-art in streaming data visualization research with a focus on the visualization design space for dynamic data and the role of the human-in-the-loop, and iii) reflections on the design-trade-offs for streaming visual analytics techniques and their practical applicability in real-world application scenarios.

streaming data↗

Polar Liquid Cloud Base Detection Algorithms for High Spectral Resolution or Micropulse Lidar Data

Liquid layers in clouds affect their microphysical processes, as well as the atmospheric energy budget. However, explicit liquid cloud base height (LCBH) detection algorithms using ground-based instruments (e.g., lidars) are currently absent in the literature. Most studies use either fixed lidar parameter thresholds or cloud base height data products that do not distinguish between ice and liquid, all of which might introduce inconsistencies and errors in the resolved LCBHs. In this paper, two LCBH detection algorithms are presented; the first algorithm uses the high spectral resolution lidar (HSRL) data, and yields satisfactory results. The second algorithm incorporates micropulse lidar (MPL) data for the LCBH detection. A 1-year long comparison of data gathered at Barrow, Alaska, and McMurdo Station, Antarctica, which includes other cloud base detection methodologies (ceilometer, MPL value-added product cloud base height, LCBHs detected using a fixed MPL depolarization threshold) emphasize the merits of the MPL algorithm.

Silber, Israel↗

vdisquants: Video Distrometer derived radar equivalent quantities. Retrievals from the VDIS instrument providing radar equivalent quantities, including dual polarization radar quantities (e.g., Z, Differential Reflectivity ZDR).

1. Provide cleaned and filtered data stream from multiple ARM disdrometers; 2. Estimate commonly-used physical parameters of the Drop Size Distribution (DSD). 3. Calculate radar equivalent quantities such as the Radar Reflectivity Factor Z.

54 ENVIRONMENTAL SCIENCES↗

SAD phasing of XFEL data depends critically on the error model

A nonlinear least-squares method for refining a parametric expression describing the estimated errors of reflection intensities in serial crystallographic (SX) data is presented. This approach, which is similar to that used in the rotation method of crystallographic data collection at synchrotrons, propagates error estimates from photon-counting statistics to the merged data. Here, it is demonstrated that the application of this approach to SX data provides better SAD phasing ability, enabling the autobuilding of a protein structure that had previously failed to be built. Estimating the error in the merged reflection intensities requires the understanding and propagation of all of the sources of error arising from the measurements. One type of error, which is well understood, is the counting error introduced when the detector counts X-ray photons. Thus, if other types of random errors (such as readout noise) as well as uncertainties in systematic corrections (such as from X-ray attenuation) are completely understood, they can be propagated along with the counting error, as appropriate. In practice, most software packages propagate as much error as they know how to model and then include error-adjustment terms that scale the error estimates until they explain the variance among the measurements. If this is performed carefully, then during SAD phasing likelihood-based approaches can make optimal use of these error estimates, increasing the chance of a successful structure solution. In serial crystallography, SAD phasing has remained challenging, with the few examples of de novo protein structure solution each requiring many thousands of diffraction patterns. Here, the effects of different methods of treating the error estimates are estimated and it is shown that using a parametric approach that includes terms proportional to the known experimental uncertainty, the reflection intensity and the squared reflection intensity to improve the error estimates can allow SAD phasing even from weak zinc anomalous signal.

59 BASIC BIOLOGICAL SCIENCES↗

Filling data analysis gaps in time-resolved crystallography by machine learning

There is a growing understanding of the structural dynamics of biological molecules fueled by x-ray crystallography experiments. Time-resolved serial femtosecond crystallography (TR-SFX) with x-ray Free Electron Lasers allows the measurement of ultrafast structural changes in proteins. Nevertheless, this technique comes with some limitations. One major challenge is the quality of data from TR-SFX measurements, which often faces issues like data sparsity, partial recording of Bragg reflections, timing errors, and pixel noise. To overcome these difficulties, conventionally, large volumes of data are collected and grouped into a few temporal bins. The data in each bin are then averaged and paired with the mean of their corresponding jittered timestamps. This procedure provides one structure per bin, resulting in a limited number of averaged structures for the entire time interval spanned by the experiment. Therefore, the information on ultrafast structural dynamics at high temporal resolution is lost. This has initiated research for advanced methods of analyzing experimental TR-SFX data beyond the standard binning and averaging method. To address this problem, we use a machine learning algorithm called Nonlinear Laplacian Spectral Analysis (NLSA), which has emerged as a promising technique for studying the dynamics of complex systems. In this work, we demonstrate the power of this algorithm using synthetic x-ray diffraction snapshots from a protein with significant data incompleteness, timing uncertainties, and noise. Our study confirms that NLSA is a suitable approach that effectively mitigates the effects of these artifacts in TR-SFX data and recovers accurate structural dynamics information hidden in such data.

Trujillo, Justin (ORCID:0000000285505360)↗

WFIP3 MRR2 / Processed Data, Barge

This dataset includes the reflectivity, estimated rainfall rate, liquid water content, and vertical velocity recorded by the MRR2 averaged over 30 s intervals.

17 WIND ENERGY↗

Integral Observations of the Reflection Component of Seyfert Galaxies

The data were analyzed by Dr. Fabian's student Adrian Turner and included in his thesis (completed Sept 2004). We did not detect MCG-6 using the then current software and the spectrum of the Circinus galaxy turned out to be even worse then the published BeppoSAX spectrum. We decided not to do any more work on it. We were contacted about the data in March by Thierry Courvoisier (the data were thea public) as he had a student, Simona Soidi, working on a compilation of spectra. Dr. Fabian sent them the chapter from Adrian's thesis and we provided some general comments on what they were doing on 6 objects. This has since been accepted for publication with Fabian as a co-author. A paper on the Integral AGN catalogue appeared on astro-ph a few days ago which contains an detection of MCG-6 with a very poor spectrum. We didn't detect it because the software back then required a source to be detected within something like 30 min exposure in order to work. Integral is NOT very sensitive.

Fabian, Andrew↗

The Infrared Reflection Nebula Around the Protostellar System in S140

We have studied the protostellar system in S140 at 2.2, 3.1 and 3.45 microns using a 128x128 InSb array at the Lick Observatory 3m telescope. Besides the protostellar sources, the data reveal a bright infrared reflection nebula. We have developed a simple model of this region and derived the physical conditions. IRSI is surrounded by a dense dusty disk viewed almost edge-on. Photons leaking out through the poles illuminate almost directly north and south the inner edge of a surrounding shell of molecular gas, Analysis of the observed colors and intensities of the NIR light, using Mie scattering theory, reveal that the dust grains in the molecular cloud are somewhat larger than in the general diffuse interstellar medium. Moreover, the incident light has a "cool" color temperature, approximately equals 800K, and likely originates from a dust photosphere close to the protostar. Finally, we find little H2O ice associated with the dusty disk around IRSI. Most of the 3.1 micron ice extinction arises instead from cool intervening molecular cloud material. We have compared our infrared dust observations with millimeter and radio observations of molecular gas associated with this region. The large scale structure observable in the molecular gas is indicative of the interaction between the protostellar wind and the surrounding molecular cloud rather than the geometry of the protostellar disk. We conclude that S140 is a young blister formed by this outflow on the side of a molecular cloud and viewed edge-on.

Harker, D.↗

Transition from wall modes to multimodality in liquid gallium magnetoconvection

Coupled laboratory-numerical experiments of Rayleigh-Bénard convection in liquid gallium subject to a vertical magnetic field are presented. The experiments are carried out in two cylindrical containers with diameter-to-height aspect ratio Γ = 1.0 and 2.0 at varying thermal forcing (Rayleigh numbers 10 5 ≲ Ra ≲ 10 8 ) and magnetic field strength (Chandrasekhar numbers 0 ≲ Ch ≲ 3 × 10 5 ). Laboratory measurements and numerical simulations confirm that magnetoconvection in our finite cylindrical tanks onsets via nondrifting wall-attached modes, in good agreement with asymptotic predictions for a semi-infinite domain. With increasing supercriticality, the experimental and numerical thermal measurements and the numerical velocity data reveal transitions between wall mode states with different azimuthal mode numbers and between wall-dominated convection to wall and interior multimodality. These transitions are also reflected in the heat transfer data, which combined with previous studies connect onset to supercritical turbulent behaviors in liquid metal magnetoconvection over a large parameter space. The gross heat transfer behaviors between magnetoconvection and rotating convection in liquid metals are compared and discussed.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Further tests of the suits reflectance model

Experiments performed by stacking cotton leaves in the port of a spectroradiometer indicate that single leaf reflectance ceases to vary with more than two leaves in the visible region and eight leaves in the infrared region. Chance and LeMaster have shown that the Suits spectral reflectance model predicts an asymptotic dependence of crop reflectance on leaf area index (LAI) with crop reflectance static for leaf area indices in excess of two in the visible regions and six in the infrared regions of the spectrum. These results are experimentally verified in the field for Milam and Penjamo spring wheat, and a theoretical relationship is discussed that relates crop reflectance at 650 nm to crop canopy LAI. Experimental data are given that relate observer zenith angle to crop reflectance for wheat. The Suits reflectance model calculations for wheat fail to agree with this data.

Lemaster, E. W.↗

Reflection Modeling of the Black Hole Binary 4U 1630–47: The Disk Density and Returning Radiation

We present the analysis of X-ray observations of the black hole binary 4U 1630−47 using relativistic reflection spectroscopy. We use archival data from the Rossi X-ray Timing Explorer, Neil Gehrels Swift Observatory, and Nuclear Spectroscopic Telescope Array observatories, taken during different outbursts of the source between 1998 and 2015. Our modeling includes two relatively new advances in modern reflection codes: high-density disks, and returning thermal disk radiation. Accretion disks around stellar-mass black holes are expected to have densities well above the standard value assumed in traditional reflection models (i.e., n(e) ∼ 10^(15) per cu. cm). New high-density reflection models have important implications in the determination of disk truncation (i.e., the disk inner radius). This is because one must retain self-consistency in the irradiating flux and corresponding disk ionization state, which is a function of disk density and system geometry. We find that the disk density is n(e) ≥ 10^(20) per cu. cm across all spectral states. This density, combined with our constraints on the ionization state of the material, implies an irradiating flux impinging on the disk that is consistent with the expected theoretical estimates. Returning thermal disk radiation—the fraction of disk photons that bend back to the disk producing additional reflection components—is expected predominantly in the soft state. We show that returning radiation models indeed provide a better fit to the soft-state data, reinforcing previous results that show that in the soft state, the irradiating continuum may be blackbody emission from the disk itself.

Riley M. T. Connors↗

[Results for SHEBA/FIRE]

The Atmospheric Research Laboratory's Radiation Measurement System (RAMS) was on the NCAR C-130 aircraft in May and July 1998, collecting radiometric data on the science flights conducted in the vicinity of the Surface Heat Budget of the Arctic Ocean (SHEBA) ship. These measurements were part of the FIRE Arctic Cloud Experiment (FIRE ACE). Analysis of some of the data focused on the absorption, reflection, and transmittance of Arctic clouds, especially compared to model results. In order to assess the absorption of solar radiation by the clear and cloudy atmosphere in the Arctic the measurements from the radiometers were combined in pairs of above-cloud segments and below-cloud segments. To get these pairs, the data for all sixteen of the flights (8 in May and 8 in July) were examined for occurrences of low-altitude segments in proximity to high-altitude segments. The low-altitude data are then treated as measurements of the bottom of a layer and the high-altitude data are taken as measurements of the top of the layer. With measurements of the upwelling and downwelling irradiances above and below a layer one can determine the reflectance, transmittance, and absorptance of the layer. Attachment: Doelling, D.R., P. Minnis, D.A. Spangenberg, V. Chakrapani, A. Mahesh, S.K. Pope, and F.P.J. Valero, Cloud radiative forcing at the top of the atmosphere during FIRE ACE derived from AVHRR data, J. Geophys. Res. 106, 15,279-15,296,2001. Minnis, P., D.R. Doelling, D.A. Spangenberg, A. Mahesh, S.K. Pope, and F.P.J. Valero, AVHRR-derived cloud radiative forcing over the ARM NSA and SHEBA site during FIRE ACE, abstract submitted to the ARM Science Team Meeting, San Antonio, TX, M a . 13-17,2000. Pope, S.K., and F.P.J. Valero, Measured and modeled radiometric fluxes in the Arctic during FIRE-ACE, presented as a poster at the American Geophysical Union meeting, San Francisco, CA, Dec. 13-17, 1999. Pope, S.K., and F.P.J. Valero, Measured and modeled radiometric fluxes in the Arctic during FIRE-ACEy paper presented at SHEBA/FIRE Workshop, National Center for Atmospheric Research, Boulder, Colo., Apr. 17-20,2000.

Valero, Francisco P. J.↗

Remote Sensing May Provide Unprecedented Hydrological Data

Basic hydrological research and water resources management may reap tremendous benefits from remote sensing technology, studies are showing. Satellite coverage may allow unprecedented accuracy in the quantification of the global hydrological cycle, for example. Yet despite such benefits, few hydrologists currently use such data. This is partly because the needed tools and algorithms are not fully developed. Such development requires field experiments that combine remotely sensed data with detailed in situ observations. AGU's Remote Sensing in Hydrology Committee has constructed a Web site (http://Iand.gsfc.nasa.gov/RSHC.html) that gives an overview of many such experiments. Included on the site is information on each experiment's overall goal, the types of in situ and remotely sensed measurements taken, relevant climate and vegetation conditions, and so forth. Links to additional relevant Web sites are included. The site is designed to be a suitable starting point for those interested in learning more about remote sensing in hydrology. It lists members of the committee who can be contacted for further information. Hydrologists have recognized the potential of remote sensing technology since the 1970s. It offers a way to avoid the logistical and economic difficulties associated with obtaining continuous in situ measurements of various hydrological variables, difficulties that are particularly pronounced in remote regions. Microwave instruments in particular can potentially provide all-weather, areally averaged estimates of certain variables (such as precipitation, soil moisture, and snow water content) that have been essentially unattainable in the past. In remote sensing, the conversion of emitted and reflected radiances into useful hydrological data is a complex problem. The measured radiances, for example, reflect the integrated character of a pixel area, a scale inconsistent with the point measurements of traditional hydrology. To develop the needed algorithms, field experiments must be designed that combine relevant satellite measurements with traditional in situ measurements in regions that are al- ready well understood hydrologically. Such field experiments can lead to the development of hydrological models that are driven with remotely sensed data. Once the performance of these models is deemed acceptable in the heavily monitored basins, they can be "transported" for use in regions having little or no in situ measurement system. Author,5: Randal D. Koster, Paul R. Houser and Edwin T. Engman, Hydrological Sciences Branch, Laboratory for Hydrospheric Process, NASA Goddard Space Flight Center, Greenbelt, Maryland, USA; William P. Kustas, Hydrology Laboratory, Agricultural Research Service, U.S. Department of Agriculture, Beltsville, Maryland, USA.

Koster, R.↗

Methods for Discerning Cloud Reflectivity Changes due to the Indirect Effect of Aerosol: A Pilot-study for Triana

Understanding the effect of aerosol on cloud systems is one of the major challenges in atmospheric and climate research. Local studies suggest a multitude of influences on cloud properties. Yet the overall effect on cloud albedo, a critical parameter in climate simulations, remains uncertain. NASA's Triana mission will provide, from its EPIC multi-spectral imager, simultaneous data on aerosol properties and cloud reflectivity. With Triana's unique position in space these data will be available not only globally but also over the entire daytime, well suited to accommodate the often short lifetimes of aerosol and investigations around diurnal cycles. This pilot study explores the ability to detect relationships between aerosol properties and cloud reflectivity with sophisticated statistical methods. Sample results using data from the EOS Terra platform to simulate Triana are presented.

Kinne, S.↗

Data acquisition for a real time fault monitoring and diagnosis knowledge-based system for space power system

The design and implementation of the real-time data acquisition and processing system employed in the AMPERES project is described, including effective data structures for efficient storage and flexible manipulation of the data by the knowledge-based system (KBS), the interprocess communication mechanism required between the data acquisition system and the KBS, and the appropriate data acquisition protocols for collecting data from the sensors. Sensor data are categorized as critical or noncritical data on the basis of the inherent frequencies of the signals and the diagnostic requirements reflected in their values. The critical data set contains 30 analog values and 42 digital values and is collected every 10 ms. The noncritical data set contains 240 analog values and is collected every second. The collected critical and noncritical data are stored in separate circular buffers. Buffers are created in shared memory to enable other processes, i.e., the fault monitoring and diagnosis process and the user interface process, to freely access the data sets.

Wilhite, Larry D.↗

Quantitative lithologic mapping in spectral ratio feature space - Volcanic, sedimentary and metamorphic terrains

The nature of spectral lithologic mapping is studied utilizing ratios centered around the wavelength means of TM imagery. Laboratory-derived spectra are analyzed to determine the two-dimensional relationships and distributions visible in spectral ratio feature space. The spectral distributions of various rocks and minerals in ratio feature space are found to be controlled by several spectrally dominant molecules. Three study areas were examined: Rawhide Mining District, Nevada; Manzano Mountains, New Mexico; and the Sevilleta Long Term Ecological Research site in New Mexico. It is shown that, in the comparison of two ratio plots of laboratory reflectance spectra, i.e., 0.66/0.485 micron versus 1.65/2.22 microns with those derived from TM data, several molecules spectrally dominate the reflectance characteristic of surface lithologic units. Utilizing the above ratio combination, two areas are successfully mapped based on their distribution in spectral ratio feature space.

Campos-Marquetti, Raul, Jr.↗

Hyperspectral Fluorescence and Reflectance Imaging Instrument

The system is a single hyperspectral imaging instrument that has the unique capability to acquire both fluorescence and reflectance high-spatial-resolution data that is inherently spatially and spectrally registered. Potential uses of this instrument include plant stress monitoring, counterfeit document detection, biomedical imaging, forensic imaging, and general materials identification. Until now, reflectance and fluorescence spectral imaging have been performed by separate instruments. Neither a reflectance spectral image nor a fluorescence spectral image alone yields as much information about a target surface as does a combination of the two modalities. Before this system was developed, to benefit from this combination, analysts needed to perform time-consuming post-processing efforts to co-register the reflective and fluorescence information. With this instrument, the inherent spatial and spectral registration of the reflectance and fluorescence images minimizes the need for this post-processing step. The main challenge for this technology is to detect the fluorescence signal in the presence of a much stronger reflectance signal. To meet this challenge, the instrument modulates artificial light sources from ultraviolet through the visible to the near-infrared part of the spectrum; in this way, both the reflective and fluorescence signals can be measured through differencing processes to optimize fluorescence and reflectance spectra as needed. The main functional components of the instrument are a hyperspectral imager, an illumination system, and an image-plane scanner. The hyperspectral imager is a one-dimensional (line) imaging spectrometer that includes a spectrally dispersive element and a two-dimensional focal plane detector array. The spectral range of the current imaging spectrometer is between 400 to 1,000 nm, and the wavelength resolution is approximately 3 nm. The illumination system consists of narrowband blue, ultraviolet, and other discrete wavelength light-emitting-diode (LED) sources and white-light LED sources designed to produce consistently spatially stable light. White LEDs provide illumination for the measurement of reflectance spectra, while narrowband blue and UV LEDs are used to excite fluorescence. Each spectral type of LED can be turned on or off depending on the specific remote-sensing process being performed. Uniformity of illumination is achieved by using an array of LEDs and/or an integrating sphere or other diffusing surface. The image plane scanner uses a fore optic with a field of view large enough to provide an entire scan line on the image plane. It builds up a two-dimensional image in pushbroom fashion as the target is scanned across the image plane either by moving the object or moving the fore optic. For fluorescence detection, spectral filtering of a narrowband light illumination source is sometimes necessary to minimize the interference of the source spectrum wings with the fluorescence signal. Spectral filtering is achieved with optical interference filters and absorption glasses. This dual spectral imaging capability will enable the optimization of reflective, fluorescence, and fused datasets as well as a cost-effective design for multispectral imaging solutions. This system has been used in plant stress detection studies and in currency analysis.

Ryan, Robert E.↗

Implications of Whole-Disc DSCOVR EPIC Spectral Observations for Estimating Earth's Spectral Reflectivity Based on Low-Earth-Orbiting and Geostationary Observations

Earth's reflectivity is among the key parameters of climate research. National Aeronautics and Space Administration (NASA)'s Earth Polychromatic Imaging Camera (EPIC) onboard National Oceanic and Atmospheric Administration (NOAA)'s Deep Space Climate Observatory (DSCOVR) spacecraft provides spectral reflectance of the entire sunlit Earth in the near backscattering direction every 65 to 110 min. Unlike EPIC, sensors onboard the Earth Orbiting Satellites (EOS) sample reflectance over swaths at a specific local solar time (LST) or over a fixed area. Such intrinsic sampling limits result in an apparent Earth's reflectivity. We generated spectral reflectance over sampling areas using EPIC data. The difference between the EPIC and EOS estimates is an uncertainty in Earth's reflectivity. We developed an Earth Reflector Type Index (ERTI) to discriminate between major Earth atmosphere components: clouds, cloud-free ocean, bare and vegetated land. Temporal variations in Earth's reflectivity are mostly determined by clouds. The sampling area of EOS sensors may not be sufficient to represent cloud variability, resulting in biased estimates. Taking EPIC reflectivity as a reference, low-earth-orbiting-measurements at the sensor-specific LST tend to overestimate EPIC values by 0.8% to 8%. Biases in geostationary orbiting approximations due to a limited sampling area are between −0.7% and 12%. Analyses of ERTI-based Earth component reflectivity indicate that the disagreement between EPIC and EOS estimates depends on the sampling area, observation time and vary between −10% and 23%.

DSCOVR↗