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At least 1,351 records · Page 75
All sourcesNASA NTRSDOE OSTI
DOE OSTI2019

Deep‐sea hydrothermal vent metagenome‐assembled genomes provide insight into the phylum Nanoarchaeota

Summary Ectosymbiotic Nanoarchaeota live on the surface of diverse archaeal hosts. Despite being broadly distributed in global geothermal systems, only three Nanoarchaeota have been successfully co‐cultivated with their hosts, and until now no nanoarchaeotal cultures or genomes have been described from deep‐sea hydrothermal vents. We recovered three nanoarchaeotal metagenome‐assembled genomes (MAGs) from deep‐sea hydrothermal vent sites at the Eastern Lau Spreading Center (M10‐121), Guaymas Basin (Gua‐46) and the Mid‐Cayman Rise (MC‐1). Based on average amino acid identity analysis, M10‐121 is a novel species in the candidate genus Nanoclepta, while the other two MAGs represent novel genera in the Nanoarchaeota . Like previously sequenced Nanoarchaeota, each MAG encodes at least one split protein‐coding gene. The MAGs also contain a mosaic of key nanoarchaeotal features, including CRISPR repeat regions and marker genes for gluconeogenesis and archaeal flagella. MC‐1 also encodes the pentose bisphosphate pathway, which may allow the nanoarchaeote to bypass several steps in glycolysis and produce ATP.

St. John, Emily↗
DOE OSTI2023

Morphological traits for allometric scaling of the European Sea Bass Dicentrarchus labrax (Linnaeus, 1758) from Southern Portugal population

Abstract The present study aimed to determine the allometric scaling among a selection of morphological traits in European sea bass ( Dicentrarchus labrax ) to estimate fish body weight. A set of morphological traits (fish body weight, length, height, and width) were directly measured in 146 fish of a recirculating aquaculture system, with body weights ranging from 17.11 to 652.21 g. In addition, a collection of digital imagery of each anesthetized fish from the side and top views were used to estimate other traits (indirect measures). Multiple regression analysis and regression coefficients were calculated using all possible combinations of biometric data (predictors) to estimate fish body weight, applying different numerical fitting models (linear, log‐linear, quadratic, exponential). The results showed that the best combination of traits for estimating fish body weight were fish body width, length and height, collected from direct measure ( R 2 = 0.995), for a log‐linear model fitting, which revealed more accurate determinations than the most commonly used length–weight relationship. Nevertheless, other combinations of morphological traits and fitting models were also found to be suitable in successfully predict fish body weight, with variability ranging between 92.5% and 98.5%. For indirect measures, the best predictor was a combination of traits from top view (width, eye distance and area without fins) fitted with a log‐linear function. These results comprise a relevant baseline in supporting the high potential of noninvasive methods to accurately follow the growth of European sea bass juveniles, recurring to imagery analysis of anesthetized fish. It has major potential applications in feeding consumption trials and fish growth models, as it allows for continuously following up fish growth under different experimental conditions without therein distress derived from manipulation.

Azevedo, Ana↗
DOE OSTI2019

Interactive effects of dietary fishmeal level and plant essential oils supplementation on European sea bass, Dicentrarchus labrax : Growth performance, nutrient utilization, and immunological response

Abstract The inclusion of phytogenics in fish feed is a promising strategy to compensate for the negative performance effects of replacing fishmeal (FM) with vegetable sources. The present work assessed the interactive effects of different dietary FM levels (22.5 and 10% of formulation) and the supplementation of a commercial blend of anise, citrus, and oregano essential oils (Digestarom PEP M.G.E 150) on European sea bass, Dicentrarchus labrax growth performance, nutrient utilization, gut morphology, antioxidant status, and immunological response over a 60‐day growth trial. Results showed decreased growth and protein efficiency ratio and increased feed conversion ratio with a low dietary FM level. In contrast, supplementation of the phytogenic product demonstrated improved performance and nutrient utilization together with increased protein and energy retention. Supplementation with the plant essential oils fully compensated for the negative intestinal changes observed in sea bass fed a low‐FM diet but showed little improvement in fish immunological response, except for the 30% increase in lysozyme activity observed in fish fed the low FM‐supplemented diet compared to those fed the standard high‐FM diet. Overall, this study supports the use of this phytogenic product in low‐FM diets as a possible tool to decrease feed costs associated with FM without compromising fish performance, nutrient utilization, and health.

Gonçalves, Rui A.↗
DOE OSTI2020

Tipping points of Mississippi Delta marshes due to accelerated sea-level rise

Coastal marshes are threatened by relative sea-level (RSL) rise, yet recent studies predict marsh survival even under the high rates of RSL rise expected later in this century. However, because these studies are mostly based on short-term records, uncertainty persists about the longer-term vulnerability of coastal marshes. We present an 8500-year-long marsh record from the Mississippi Delta, showing that at rates of RSL rise exceeding 6 to 9 mm year –1 , marsh conversion into open water occurs in about 50 years. At rates of RSL rise exceeding ~3 mm year –1 , marsh drowning occurs within a few centuries. Because present-day rates of global sea-level rise already surpass this rate, submergence of the remaining ~15,000 km 2 of marshland in coastal Louisiana is probably inevitable. RSL-driven tipping points for marsh drowning vary geographically, and those for the Mississippi Delta may be lower than elsewhere. Nevertheless, our findings highlight the need for consideration of longer time windows in determining the vulnerability of coastal marshes worldwide.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Pan-Pacific low-frequency modes of sea level and climate variability

Tide gauges provide a long observational record that can inform the nature of satellite-era basin-scale sea level trends. However, common signals must be extracted from geographically sparse records. Here, by applying low-frequency component analysis (LFCA) to tide gauge records and surface climate reconstructions, we isolate three coherent modes of Pacific Ocean variability that we ascribe to: a secular, greenhouse gas–driven climate change (LFC1); a nonlinear mode of variability with a reversal around 1980, potentially linked to aerosols (LFC2); and the Interdecadal Pacific Oscillation (LFC3). Although sea level trend patterns reflect the superimposed contribution of all modes, satellite-era trends are dominated by an increasing phase of LFC2: They are thus potentially unrepresentative of both longer-term historical patterns and those expected in the future.

Science & Technology - Other Topics↗
DOE OSTI2017

Regional and global sea-surface temperatures during the last interglaciation

The last interglaciation (LIG, 129 to 116 thousand years ago) was the most recent time in Earth’s history when global mean sea level was substantially higher than it is at present. However, reconstructions of LIG global temperature remain uncertain, with estimates ranging from no significant difference to nearly 2°C warmer than present-day temperatures. Here we use a network of sea-surface temperature (SST) records to reconstruct spatiotemporal variability in regional and global SSTs during the LIG. Our results indicate that peak LIG global mean annual SSTs were 0.5 ± 0.3°C warmer than the climatological mean from 1870 to 1889 and indistinguishable from the 1995 to 2014 mean. LIG warming in the extratropical latitudes occurred in response to boreal insolation and the bipolar seesaw, whereas tropical SSTs were slightly cooler than the 1870 to 1889 mean in response to reduced mean annual insolation.

Science & Technology - Other Topics↗
DOE OSTI2024

Continental rift evolution and drainage reorganization along the Dead Sea rift since the Miocene

The Dead Sea fault is a section of the Arabian-African plate boundary. Widespread field relations indicate that three major drainage systems (stages) occupied the landscape west of the Dead Sea fault since its initiation at ca. 20 Ma. Specifically, (1) an early to middle Miocene drainage system, only minorly reconfigured by the fault (all sediments of this system belong to the Hazeva Formation); (2) a late Miocene to early Pleistocene fault-parallel drainage system named Paran-Neqarot (all sediments of this system belong to the Arava and Zehiha Formations; and (3) the early Pleistocene to present drainage configuration. The temporal and spatial frameworks of drainage stage 1 are generally constrained by radiometric dating of interfingering volcanic units, and the onset and temporal and spatial frameworks of drainage stage 3 are well constrained by cosmogenic 10 Be surface exposure ages. The timing and longevity of the rift-parallel drainage (stage 2) have until now been evasive to direct dating. The overall time gap between stages 1 and 3 is ~12–13 million years. Thus, an early age (within this time gap) of stage 2 would imply an immediate response of drainage reorganization to rift tectonics, while a later age of this drainage system would imply a delayed response. We present 11 10 Be- 26 Al cosmogenic burial ages of alluvial and colluvial units related to the fault-parallel drainage system (stage 2), which collectively constrain the time of deposition of the Arava Formation sediments in the central Negev to ca. 8 Ma. The general lack of stratigraphic order, together with the large dispersion of ages both across and within the sampling sites, attests to significant recycling of sediments from drainage stage 1 into the Arava Formation deposits. The termination of Arava and Zehiha Formation sediment deposition at ca. 1.8 Ma was determined previously using cosmogenic exposure ages of desert pavements that cover the formations. Combining the previously published data with our new data, we established the longevity and character of the Paran-Neqarot drainage system. In conlcusion, this framework highlights the temporal aspect of drainage system build-up and collapse as it responded to transform and extensional plate boundary tectonics during the Neogene.

58 GEOSCIENCES↗
DOE OSTI2016

Fluctuation instability of the Dirac Sea in quark models of strong interactions

A number of exactly integrable (quark) models of quantum field theory that feature an infinite correlation length are considered. An instability of the standard vacuum quark ensemble, a Dirac sea (in spacetimes of dimension higher than three), is highlighted. It is due to a strong ground-state degeneracy, which, in turn, stems from a special character of the energy distribution. In the case where the momentumcutoff parameter tends to infinity, this distribution becomes infinitely narrow and leads to large (unlimited) fluctuations. A comparison of the results for various vacuum ensembles, including a Dirac sea, a neutral ensemble, a color superconductor, and a Bardeen–Cooper–Schrieffer (BCS) state, was performed. In the presence of color quark interaction, a BCS state is unambiguously chosen as the ground state of the quark ensemble.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2024

Evaluation of survival estimates generated from tracking downstream migrating juvenile sea lamprey ( Petromyzon marinus ) with a miniature acoustic telemetry tag

Fish that undertake juvenile migration pass through habitats that vary in mortality risk. The ability to identify regions of persistently low survival would improve fishery management. We conducted a field study combined with predictive modeling of survival in downstream migrating juvenile sea lamprey using a new micro-acoustic telemetry tag designed for implantation into small, slender-bodied fishes. Detection data were collected from eight receivers placed across a coastal riverine–wetland–lake complex. Juvenile sea lamprey initiated downstream movement near nautical twilight, stopped frequently, and were more likely to move during high river discharge. Estimated survival was highest in the riverine reach, declined through the river–wetland complex, and dropped precipitously in the drowned rivermouth lake. However, the high transmission rate and resulting short battery life of the microtransmitters (as configured) likely resulted in missed detections in the lower reaches. Simulation analyses suggested survival estimation could be improved by increasing the number of tagged lamprey and staggering release locations. We offer practical recommendations for the use of this new transmitter in field studies with small anguilliform fish.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2015

The Forcing of Southwestern Asia Teleconnections by Low-Frequency Sea Surface Temperature Variability during Boreal Winter

Winter precipitation over the Hindu Kush–Karakoram (HKK) range in the western Himalayas is generated by westerly perturbations whose dynamics is affected by the North Atlantic Oscillation (NAO). Larger precipitation is typically recorded during the positive NAO phase. In this work, the relationship between the NAOand winter precipitation in theHKKis explored further, using an ensemble of precipitation datasets and the 40-yr ECMWF Re-Analysis (ERA-40) and Twentieth Century Reanalysis (20CR) data. The mechanisms underlying this relationship are discussed, with a focus on the secular variations that occurred in the last century. The NAO exerts its control on HKK precipitation by altering the intensity of westerly winds in the region of the Middle East jet stream (MEJS). Results indicate that evaporation from the Persian Gulf, the northern Arabian Sea, and the Red Sea plays an important role. During positive NAO phases, westerlies are strengthened and enhanced evaporation occurs from these basins owing to higher surface wind speed. The extra moisture combines with stronger westerlies and results in enhanced moisture transport toward the HKK. Precipitation datasets covering the twentieth century show an alternation of periods of strong and weaker influence of the NAO on precipitation in the HKK. It is found that these variations are associated with changes in the spatial pattern of the NAO: the relative position of the two centers of action of the NAO determines to what extent it can modulate the MEJS, affecting precipitation in the HKK.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

The Southern hemisphere midlatitude circulation response to rapid adjustments and sea surface temperature driven feedbacks

Rapid adjustments – the response of meteorology to external forcing while sea surface temperatures (SST) and sea ice are held fixed – can affect the midlatitude circulation and contribute to long-term forced circulation responses in climate simulations. This study examines rapid adjustments in the Southern hemisphere (SH) circulation using nine models from the Precipitation Driver and Response Model Intercomparison Project (PDRMIP), which perform fixed SST and coupled ocean experiments for five perturbations: a doubling of carbon dioxide (2xCO2), a tripling of methane (3xCH4), a five-fold increase in sulphate aerosol (5xSO4), a ten-fold increase in black carbon aerosol (10xBC) and a 2% increase in solar constant (2%Sol). In the coupled experiments, the SH eddy-driven jet shifts poleward and strengthens for forcings that produce global warming (and vice versa for 5xSO4), with the strongest response found in austral summer. In austral winter, the responses project more strongly onto a change in jet strength. For 10xBC, which induces strong shortwave absorption, the multi-model mean (MMM) rapid adjustment in DJF jet latitude is ~75% of the change in the coupled simulations. For the other forcings, which induce larger SST changes, the effect of SST-mediated feedbacks on the SH circulation is larger than the rapid adjustment. Nevertheless, for these perturbations the magnitude of the MMM jet shift due to the rapid adjustment is still around 25-33% of that in the coupled experiments. The results demonstrate the need to understand the mechanisms for rapid adjustments in the midlatitude circulation, in addition to the effect of changing SSTs.

Wood, Thomas↗
DOE OSTI2021

Full Vorticity Budget of the Arabian Sea from a 0.1° Ocean Model: Sverdrup Dynamics, Rossby Waves, and Nonlinear Eddy Effects

Abstract The Arabian Sea, influenced by the Indian monsoon, has many unique features, including its basin-scale seasonally reversing surface circulation and the Great Whirl, a seasonal anticyclonic system appearing during the southwest monsoon close to the western boundary. To establish a comprehensive dynamical picture of the Arabian Sea, we utilize numerical model output and design a full vorticity budget that includes a fully decomposed nonlinear term. The ocean general circulation model has 0.1° resolution and is mesoscale eddy-resolving in the region. In the western boundary current system, we highlight the role of nonlinear eddies in the life cycle of the Great Whirl. The nonlinear eddy term is of leading-order importance in this feature’s vorticity balance. Specifically, it contributes to the Great Whirl’s persistence in boreal fall after the weakening of the southwesterly winds. In the open ocean, Sverdrup dynamics and annual Rossby waves are found to dominate the vorticity balance; the latter is considered as a key factor in the formation of the Great Whirl and the seasonal reversal of the western boundary current. In addition, we discuss different forms of vertically integrated vorticity equations in the model and argue that the bottom pressure torque term can be interpreted analogously as friction in the western boundary and vortex stretching in the open ocean.

58 GEOSCIENCES↗
DOE OSTI2023

Survival, healing, and swim performance of juvenile migratory sea lamprey ( Petromyzon marinus ) implanted with a new acoustic microtransmitter designed for small eel-like fishes

Background: Little is known about the transformer stage of the parasitic lampreys, a brief but critical period that encompasses juvenile out-migration from rivers to lakes or oceans to begin parasitic feeding. Information about this life stage could have significant conservation implications for both imperiled and invasive lampreys. We investigated tag retention, survival, wound healing, and swim performance of newly transformed sea lamprey (Petromyzon marinus) implanted with a new micro-acoustic transmitter, the eel–lamprey acoustic transmitter (ELAT), in a controlled laboratory environment. Results: The 61-day survival of our tagged subjects was 71%, within the range reported in similar studies of juvenile lampreys. However, survival was significantly lower in the tagged animals (vs control), with no effect statistically attributable to measures of animal length, mass, condition, or population of origin (Great Lakes vs. Atlantic drainage). Mortality in tagged fish was concentrated in the first four days post-surgery, suggesting injury from the surgical process. An unusually long recovery time from anesthesia may have contributed to the increased mortality. In a simple burst swim assay, tagged animals swam significantly slower (– 22.5%) than untagged animals, but were not significantly different in endurance swim tests. A composite wound healing score at day four was a significant predictor of maximum burst swim speed at day 20, and wound condition was related to animal mass, but not length, at the time of tagging. Conclusions: Impairments to survival and swim performance of juvenile sea lamprey implanted with the ELAT transmitter were within currently reported ranges for telemetry studies with small, difficult to observe fishes. Our results could be improved with more refined anesthesia and surgical techniques. The ability to track migratory movements of imperiled and pest populations of parasitic lampreys will improve our ability to estimate vital rates that underlie recruitment to the adult population (growth, survival) and to investigate the environmental factors that regulate the timing and rates of movement, in wild populations.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Low ozone dry deposition rates to sea ice during the MOSAiC field campaign: Implications for the Arctic boundary layer ozone budget

Dry deposition to the surface is one of the main removal pathways of tropospheric ozone (O 3 ). We quantified for the first time the impact of O 3 deposition to the Arctic sea ice on the planetary boundary layer (PBL) O 3 concentration and budget using year-round flux and concentration observations from the Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) campaign and simulations with a single-column atmospheric chemistry and meteorological model (SCM). Based on eddy-covariance O 3 surface flux observations, we find a median surface resistance on the order of 20,000 s m –1 , resulting in a dry deposition velocity of approximately 0.005 cm s –1 . This surface resistance is up to an order of magnitude larger than traditionally used values in many atmospheric chemistry and transport models. The SCM is able to accurately represent the yearly cycle, with maxima above 40 ppb in the winter and minima around 15 ppb at the end of summer. However, the observed springtime ozone depletion events are not captured by the SCM. In winter, the modelled PBL O 3 budget is governed by dry deposition at the surface mostly compensated by downward turbulent transport of O 3 towards the surface. Advection, which is accounted for implicitly by nudging to reanalysis data, poses a substantial, mostly negative, contribution to the simulated PBL O 3 budget in summer. During episodes with low wind speed (<5 m s –1 ) and shallow PBL (<50 m), the 7-day mean dry deposition removal rate can reach up to 1.0 ppb h –1 . Our study highlights the importance of an accurate description of dry deposition to Arctic sea ice in models to quantify the current and future O 3 sink in the Arctic, impacting the tropospheric O 3 budget, which has been modified in the last century largely due to anthropogenic activities.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Connected and Disconnected Sea Partons from CT18 Parametrization of PDFs

The separation of the connected and disconnected sea partons, which were uncovered in the Euclidean path-integral formulation of the hadronic tensor, is accommodated with the CT18 parametrization of the global analysis of the parton distribution functions (PDFs). This is achieved with the help of the distinct small x x behaviors of these two sea parton components and the constraint from the lattice calculation of the ratio of the strange momentum fraction to that of the {\bar u} u ‾ or {\bar d} d ‾ in the disconnected insertion. This allows lattice calculations of separate flavors in both the connected and disconnected insertions to be directly compared with the global analysis results term by term.

Hou, Tie-Jiun↗
DOE OSTI2012

Science and Engineering Alliance, Inc. (SEA) Activities to Increase Participation of Students from Underrepresented Groups in Science, Technology, Engineering and Mathematics (STEM) Programs

Using its 22 years of experience in developing the STCRP and recent success with the support of District of Columbia (DC) high school and middle school participation in the DOE Regional Science Bowl, SEA continues to strengthen and expand these activities. Considerable attention has been given over the years, to streamlining and executing all tasks associated with planning and implementing a successful program, with primary emphasis on the DOE Washington, D.C. Regional Science Bowl. With success in working with the DC high schools and middle schools, HBCUs and other MSIs, coupled with experience interacting with DOE national laboratories like Lawrence Livermore National Laboratory (LLNL), SEA provides a strong basis for adding value to the DOE’s diversity efforts. A faculty development component was added to the program.

99 GENERAL AND MISCELLANEOUS↗
DOE OSTI2014

Investigation of Spatial Variation of Sea States Offshore of Humboldt Bay CA Using a Hindcast Model.

Spatial variability of sea states is an important consideration when performing wave resource assessments and wave resource characterization studies for wave energy converter (WEC) test sites and commercial WEC deployments. This report examines the spatial variation of sea states offshore of Humboldt Bay, CA, using the wave model SWAN . The effect of depth and shoaling on bulk wave parameters is well resolved using the model SWAN with a 200 m grid. At this site, the degree of spatial variation of these bulk wave parameters, with shoaling generally perpendicular to the depth contours, is found to depend on the season. The variation in wave height , for example, was higher in the summer due to the wind and wave sheltering from the protruding land on the coastline north of the model domain. Ho wever, the spatial variation within an area of a potential Tier 1 WEC test site at 45 m depth and 1 square nautical mile is almost negligible; at most about 0.1 m in both winter and summer. The six wave characterization parameters recommended by the IEC 6 2600 - 101 TS were compared at several points along a line perpendicular to shore from the WEC test site . As expected, these parameters varied based on depth , but showed very similar seasonal trends.

Dallman, Ann Renee↗